cluster # 8044

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Oryza sativa
cluster # 8044 cluster # 8044 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8044#0 length = 1900 sequences # 5
consensusID : consensus_8044#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1900
fasta sequence
                              [TTTCGCCGCCGCCGCTGCCGCCGGCGATGGAGCCACCGGCGGGAGGCTCCTCCGATCATCGCCGGGGTGCCGGGACCGGCGCGGGCGCCGGTGGGGCCGCCTCGCCGTCCGGCCTCCGCCGCTACGGCTTCAGATTCTCCGCCTCCAGCCTCCTGCAGGCCCCGCTCGCTGCGCTGCTCGAGTACTCCGGCGTCGTCCCCTCCGGCCCCGGCGCCCCGCAGGCGGGGCCGCCCTCGGCGCTGTCGTCCTCGCCGTCTTCTTCGTCGTCGTCGTCGGAGGCCGATGGGCTGCTCTCCGCGGCCGCGGCTGGGGACGGGGAGGTCTCGATCCGGATCCAGGGCGGCCCCGGGGAGGCCGACGCGGCGGGCGTCGCGGGGGCGGCCTCGTCGGGGGAGGACTCGATCGAGGCGACCGCCGCCGGGGACGTTGACCCGGCCTCGGCTGCCGCGGGGAGGGGTGGCGGCGCCGACGCGGAGGCGAGTGGTGGGGGCGCGGACGGCGCGTCCGGGAACGGGGGTGGGGACCGCGCCTACCAGCGGTATGACGTGCACCATGTCGCGAGGTGGATCGAGCAGATACTGCCATTCTCGCTGCTGCTGCTCGTCGTCTTCATACGGCAGCATCTCCAGGTTTCTTTGTCACAATTTGGATTGCTGCTGTAATGTTCAAGTCAAATGATATATTGCGGAAGCAAACTGCTTTGAAGGGCGAGAGAAAAATTGCTGTGCTTGTCGGGATTACAGTAATCTTCATGATTCATGTGTTTGGTGTCTATTGGTGGTACAGGAATGATGATCTTCTCAGACCTCTGTTCATGCTTCCGCCAAAAGAAATACCGCCATTTTGGCATGCGATTTTTATCATCATGGTCAATGATACAATGGTTCGCCAGGCAGCAATGGCCATTAAGTGCATGCTACTTATGTACTATAAGAATAGCAGAGGTCGTAACTACCGTAAGCAGGGTCAAATGCTAACCCTTGTGGAATACCTTCTGCTCCTATATCGTGCCTTGTTGCCAACTCCTGTTTGGTACCGTTTCTTTCTGAACAAGGAATATGGGAGTCTTTTCTCATCTTTAACCACTGGACTGTACCTGACCTTCAAGTTAACTTCAGTAGTTGAAAAGGTTCAGTCATTCTTGGCTGCAGTGAAAGCATTGTCACGTAAAGATGTGCATTATGGGTCTTATGCGACAGCAGAACAGGTAATTGCTGCTGGTGATATGTGTGCCATCTGCCAGGAAAAGATGCATGTTCCTGTCCTCCTCCGCTGTAAACATATTTTCTGTGAGGACTGTGTCTCTGAATGGTTTGAGCGAGAACGGACTTGCCCCCTGTGTAGAGCATTGGTAAAGCCTGCTGATATTCGGTCATTTGGTGATGGTTCTACAAGTCTTTTCTTCCAGTTGTTTTAGACACCAAATGGGAAACTGCTAACATATAACAATGGACAAGCAATTGCTTATGAAAATCCAAGTGAATCCTTTTTTTCAAAAACATGTCATGCCGTCTTCCCCTGCACTGATGTCAAAGTGAGAAGATTCGCAGAGATTATGTGAGCGCAATATGTCTGATTCATCTATATGTTCGAGAAATAGTTTAGAGAACTGGTCTGTGGTCAGTTGCGACGTTAGCATAGATTTGCAGCAAATCTTTATGGGCCTGGTCGGTTTCTGGAGGAATGATCAATCCTAGTGCAAAGCCCTGGTGTGTGTGATCCCCGCCACGCTATTGGCTTGCATAATGTAAAAATTTGGAATTTTTGCAAAAGTATATGTACCCCGGCGCAACTGGAGTGAACAAGTTTTGCTTCTTAGCAAGACGAGGGAAGGCAGTGGTAAAATTGTAACCTGTAAAGCTTTGATACGTCAAAATGTTGAAACCATATATAAAATGTA]

[+] EMBL CB639206             [TTTCGCCGCCGCCGCTGCCGCCGGCGATGGAGCCACCGGCGGGAGGCTCCTCCGATCATCGCCGGGGTGCCGGGACCGGCGCGGGCGCCGGTGGGGCCGCCTCGCCGTCCGGCCTCCGCCGCTACGGCTTCATTTTCTTCGCCTCCAGCCTCCTGCAGGCCCCGCTCGCTGCGCTGCTCGAGTACTCCGGCGTCTTCCCCTCCGGCCCCGGCGCCCCGCAGGCGGGGCCGCCCTCGGTGCTGTTATGCTCACCGTCTTCTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK120330             [                                                                                                                               CTTCAGATTCTCCGCCTCCAGCCTCCTGCAGGCCCCGCTCGCTGCGCTGCTCGAGTACTCCGGCGTCGTCCCCTCCGGCCCCGGCGCCCCGCAGGCGGGGCCGCCCTCGGCGCTGTCGTCCTCGCCGTCTTCTTCGTCGTCGTCGTCGGAGGCCGATGGGCTGCTCTCCGCGGCCGCGGCTGGGGACGGGGAGGTCTCGATCCGGATCCAGGGCGGCCCCGGGGAGGCCGACGCGGCGGGCGTCGCGGGGGCGGCCTCGTCGGGGGAGGACTCGATCGAGGCGACCGCCGCCGGGGACGTTGACCCGGCCTCGGCTGCCGCGGGGAGGGGTGGCGGCGCCGACGCGGAGGCGAGTGGTGGGGGCGCGGACGGCGCGTCCGGGAACGGGGGTGGGGACCGCGCCTACCAGCGGTATGACGTGCACCATGTCGCGAGGTGGATCGAGCAGATACTGCCATTCTCGCTGCTGCTGCTCGTCGTCTTCATACGGCAGCATCTCCAGGTTTCTTTGTCACAATTTGGATTGCTGCTGTAATGTTCAAGTCAAATGATATATTGCGGAAGCAAACTGCTTTGAAGGGCGAGAGAAAAATTGCTGTGCTTGTCGGGATTACAGTAATCTTCATGATTCATGTGTTTGGTGTCTATTGGTGGTACAGGAATGATGATCTTCTCAGACCTCTGTTCATGCTTCCGCCAAAAGAAATACCGCCATTTTGGCATGCGATTTTTATCATCATGGTCAATGATACAATGGTTCGCCAGGCAGCAATGGCCATTAAGTGCATGCTACTTATGTACTATAAGAATAGCAGAGGTCGTAACTACCGTAAGCAGGGTCAAATGCTAACCCTTGTGGAATACCTTCTGCTCCTATATCGTGCCTTGTTGCCAACTCCTGTTTGGTACCGTTTCTTTCTGAACAAGGAATATGGGAGTCTTTTCTCATCTTTAACCACTGGACTGTACCTGACCTTCAAGTTAACTTCAGTAGTTGAAAAGGTTCAGTCATTCTTGGCTGCAGTGAAAGCATTGTCACGTAAAGATGTGCATTATGGGTCTTATGCGACAGCAGAACAGGTAATTGCTGCTGGTGATATGTGTGCCATCTGCCAGGAAAAGATGCATGTTCCTGTCCTCCTCCGCTGTAAACATATTTTCTGTGAGGACTGTGTCTCTGAATGGTTTGAGCGAGAACGGACTTGCCCCCTGTGTAGAGCATTGGTAAAGCCTGCTGATATTCGGTCATTTGGTGATGGTTCTACAAGTCTTTTCTTCCAGTTGTTTTAGACACCAAATGGGAAACTGCTAACATATAACAATGGACAAGCAATTGCTTATGAAAATCCAAGTGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB639204             [                                                                                                                               CTTCAGATTCTCCGCCTCCAGCCTCCTGCAGGCCCCGCTCGCTGCGCTGCTCGAGTACTCCGGCGTCGTCCCCTCCGGCCCCGGCGCCCCGCAGGCGGGGCCGCCCTCGGCGCTGTCGTCCTCGCCGTCTTCTTCGTCGTCGTCGTCGGAGGCCGATGGGCTGCTCTCCGCGGCCGCGGCTGGGGACGGGGAGGTCTCGATCCGGATCCAGGGCGGCCCCGGGGAGGCCGACGCGGCGGGCGTCGCGGGGGCGGCCTCGTCGGGGGAGGACTCGATCGAGGCGACCGCCGCCGGGGACGTTGACCCGGCCTCNGCTGCCGCGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU057822             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAGATGTGCATTATGGGTCTTATGCGACAGCAGAACAGGTAATTGCTGCTGGTGATATGTGTGCCATCTGCCAGGAAAAGATGCATGTTCCTGTCCTCCTCCGCTGTAAACATATTTTCTGTGAGGACTGTGTCTCTGAATGGTTTGAGCGAGAACGGACTTGCCCCCTGTGTAGAGCATTGGTAAAGCCTGCTGATATTCGGTCATTTGGTGATGGTTCTACAAGTCTTTTCTTCCAGTTGTTTTAGACACCAAATGGGAAACTGCTAACATATAACAATGGACAAGCAATTGCTTATGAAAATCCAAGTGAATCCTTTTTTTCAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB639205             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAGAACGGACTTGCCCCCTGTGTAGAGCATTGGTAAAGCCTGCTGATATTCGGTCATTTGGTGATGGTTCTACAAGTCTTTTCTTCCAGTTGTTTTAGACACCAAATGGGAAACTGCTAACATATAACAATGGACAAGCAATTGCTTATGAAAATCCAAGTGAATCCTTTTTTTCTTTATCATGTCATGCCGTCTTCCCCTGCACTGATGTCAAAGTGAGAAGATTCGCAGAGATTATGTGAGCGCAATATGTCTGATTCATCTATATGTTCGAGAAATAGTTTAGAGAACTGGTCTGTGGTCAGTTGCGACGTTAGCATAGATTTGCAGCAAATCTTTATGGGCCTGGTCGGTTTCTGGAGGAATGATCAATCCTAGTGCAAAGCCCTGGTGTGTGTGATCCCCGCCACGCTATTGGCTTGCATAATGTAAAAATTTGGAATTTTTGCAAAAGTATATGTACCCCGGCGCAACTGGAGTGAACAAGTTTTGCTTCTTAGCAAGACGAGGGAAGGCAGTGGTAAAATTGTAACCTGTAAAGCTTTGATACGTCAAAATGTTGAAACCATATATAAAATGTA]




>consensus_8044#0
TTTCGCCGCCGCCGCTGCCGCCGGCGATGGAGCCACCGGCGGGAGGCTCCTCCGATCATC
GCCGGGGTGCCGGGACCGGCGCGGGCGCCGGTGGGGCCGCCTCGCCGTCCGGCCTCCGCC
GCTACGGCTTCAGATTCTCCGCCTCCAGCCTCCTGCAGGCCCCGCTCGCTGCGCTGCTCG
AGTACTCCGGCGTCGTCCCCTCCGGCCCCGGCGCCCCGCAGGCGGGGCCGCCCTCGGCGC
TGTCGTCCTCGCCGTCTTCTTCGTCGTCGTCGTCGGAGGCCGATGGGCTGCTCTCCGCGG
CCGCGGCTGGGGACGGGGAGGTCTCGATCCGGATCCAGGGCGGCCCCGGGGAGGCCGACG
CGGCGGGCGTCGCGGGGGCGGCCTCGTCGGGGGAGGACTCGATCGAGGCGACCGCCGCCG
GGGACGTTGACCCGGCCTCGGCTGCCGCGGGGAGGGGTGGCGGCGCCGACGCGGAGGCGA
GTGGTGGGGGCGCGGACGGCGCGTCCGGGAACGGGGGTGGGGACCGCGCCTACCAGCGGT
ATGACGTGCACCATGTCGCGAGGTGGATCGAGCAGATACTGCCATTCTCGCTGCTGCTGC
TCGTCGTCTTCATACGGCAGCATCTCCAGGTTTCTTTGTCACAATTTGGATTGCTGCTGT
AATGTTCAAGTCAAATGATATATTGCGGAAGCAAACTGCTTTGAAGGGCGAGAGAAAAAT
TGCTGTGCTTGTCGGGATTACAGTAATCTTCATGATTCATGTGTTTGGTGTCTATTGGTG
GTACAGGAATGATGATCTTCTCAGACCTCTGTTCATGCTTCCGCCAAAAGAAATACCGCC
ATTTTGGCATGCGATTTTTATCATCATGGTCAATGATACAATGGTTCGCCAGGCAGCAAT
GGCCATTAAGTGCATGCTACTTATGTACTATAAGAATAGCAGAGGTCGTAACTACCGTAA
GCAGGGTCAAATGCTAACCCTTGTGGAATACCTTCTGCTCCTATATCGTGCCTTGTTGCC
AACTCCTGTTTGGTACCGTTTCTTTCTGAACAAGGAATATGGGAGTCTTTTCTCATCTTT
AACCACTGGACTGTACCTGACCTTCAAGTTAACTTCAGTAGTTGAAAAGGTTCAGTCATT
CTTGGCTGCAGTGAAAGCATTGTCACGTAAAGATGTGCATTATGGGTCTTATGCGACAGC
AGAACAGGTAATTGCTGCTGGTGATATGTGTGCCATCTGCCAGGAAAAGATGCATGTTCC
TGTCCTCCTCCGCTGTAAACATATTTTCTGTGAGGACTGTGTCTCTGAATGGTTTGAGCG
AGAACGGACTTGCCCCCTGTGTAGAGCATTGGTAAAGCCTGCTGATATTCGGTCATTTGG
TGATGGTTCTACAAGTCTTTTCTTCCAGTTGTTTTAGACACCAAATGGGAAACTGCTAAC
ATATAACAATGGACAAGCAATTGCTTATGAAAATCCAAGTGAATCCTTTTTTTCAAAAAC
ATGTCATGCCGTCTTCCCCTGCACTGATGTCAAAGTGAGAAGATTCGCAGAGATTATGTG
AGCGCAATATGTCTGATTCATCTATATGTTCGAGAAATAGTTTAGAGAACTGGTCTGTGG
TCAGTTGCGACGTTAGCATAGATTTGCAGCAAATCTTTATGGGCCTGGTCGGTTTCTGGA
GGAATGATCAATCCTAGTGCAAAGCCCTGGTGTGTGTGATCCCCGCCACGCTATTGGCTT
GCATAATGTAAAAATTTGGAATTTTTGCAAAAGTATATGTACCCCGGCGCAACTGGAGTG
AACAAGTTTTGCTTCTTAGCAAGACGAGGGAAGGCAGTGGTAAAATTGTAACCTGTAAAG
CTTTGATACGTCAAAATGTTGAAACCATATATAAAATGTA
clustalw multiple alignements is not computed in this case