cluster # 8057

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Oryza sativa
cluster # 8057 cluster # 8057 Sequences # 5 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8057#0 length = 488 sequences # 5

consensusID : consensus_8057#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 488
fasta sequence

                              [ACCAAACATGGGAATGCATCAAAATTATC-AATTAC-GTCCTGAATATACAAATTCACAAAGAGATTAATCAAAATCTCAAACAAAAAGTCATAAAGTCATAGATTACATTTCCCCATTGACTAAATCAATAAACCAGAAACCCC-AAGCCGGCATCTGTTGC-TTGCCTACCTCCGGCGCACCAGCTTGCTCAACCCTCCTCGTTCGCGGACGATTGCTCAACCCCGCGCGGCCGCGCCTCCAAGGCGACCAACTGCGGGTGGCCGAGCCTAAGCCTGCGGCGTTTCTTGCCTCACCCCTCAGATCCTCGGTTCATGGCCTCATGGGCACTGGGCAGTGGAGCAATTGAAGCTTAGAAGGG-AAGGGGAG-AAGAGAATGGAAGCTCATGGGAAGAAGCGGAGGCGTGACTGCGGGATGCAGTTTTCTCGTTTCCGTCGGCGGCGGAGTGAGAGCTTGCAGAGATGCCGCATCCGTGATTTCTGTGTGGAGGG]

[+] EMBL CB966371             [ACCAAACATGGGAATGCATCAAAATTATC AGTTAC GTCCTGAATATACAAATTCACAAAGAGATTAATCAAAATCTCAAACAAAAAGTCATAAAGTCATAGATTACATTTCTCCATTGACTAAATCAATAAACCAGAAACCCC AAGCCGGCATCTGTTGC TTGCCTACCTCCGGCGCACCAGCTTGCTCAACCCTCCTCGTTCGCGGACGATTGCTCAACCCCGCGCGGCCGCGCCTCCAAGGCGACCAACTGCGGGTGGCCGAGCCTGAGCCTGCGGCGTTGCTTGCCTCACCCCTCAGATCCTCGGTTCATGGCCTCATGGGCACTGGGCAGTGGAGCAATTGAAGCTTAGAAGGGCAAGGAGAGCAAGAGAATGGAAGCTCATGGGAAGAAGCGGAGGCGTGACTGCGGGATGCAGTTTTCTCGTTTCCGTCGGCGGCGGAGTGAGAGCTTGCAGAGA                             ]
[+] EMBL CF300500             [        ttttttTGCATCAAAATTATC AATTAC GTCCTGAATATACAAATTCACAAAGAGATTAATCAAAATCTCAAACAAAAAGTCATAAAGTCATAGATTACATTTCCCCATTGACTAAATCAATAAACCAGAAACCCC AAGCCGGCATCTGTTGC TTGCCTACCTCCGGCGCACCAGCTTGCTCAACCCTTCTTGTTCGCGGACGATTGCTCAACCCCGCGCGGCCGCGCCTCCAAGGCGACCAACTGCGGGTGGCCGAGCCTAAGCCTGCGGCGTTTCTTGCCTCACCCCTCAGATCCTCGGTTCATGGCCTCATGGGCACTGGGCAGTGGAG                                                                                                                                                       ]
[-] EMBL AU181030             [             anGCATCAAAATTATCAAATTACGGTCCTGAATATNCAAATTCNCAAAGAGATTAATCAAAATTTCAAACAAAAAGTCATAAAGTCATAGATTACATTTCCCCATTGANTAAATCAATAAACCAGAAACCCCAAAGCCGGCATCTGTTGCTTTGCCTACCTCCGGCGCACCAGCTTGCTCA                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB685941             [                         TATC AATTAC GTCCTGAATATACAAATTCACAAAGAGATTAATCAAAATCTCAAACAAAAAGTCATAAAGTCATAGATTACATTTCCCCATTGACTAAATCAATAAACCAGAAACCCC AAGCCGGCATCTGTTGC TTGCCTACCTCCGGCGCACCAGCTTGCTCAACCCTCCTCGTTCGCGGACGATTGCTCAACCCCGCGCGGCCGCGCCTCCAAGGCGACCAACTGCGGGTGGCCGAGCCTAAGCCTGCGGCGTTTCTTGCCTCACCCCTCAGATCCTCGGTTCATGGCCTCATGGGCACTGGGCAGTGGAGCAATTGAAGCTTAGAAGGG AAGGGGAG AAGAGAATGGAAGCTCATGGGAAGAAGCGGAGGCGTGACTGCGGGATGCAGTTTTCTCGTTTCCGTCGGCGGCGGAGT                                            ]
[-] EMBL AK120105             [                                        CTGAATATACAAATTCACAAAGAGATTAATCAAAATCTCAAACAAAAAGTCATAAAGTCATAGATTACATTTCCCCATTGACTAAATCAATAAACCAGAAACCCC AAGCCGGCATCTGTTGC TTGCCTACCTCCGGCGCACCAGCTTGCTCAACCCTCCTCGTTCGCGGACGATTGCTCAACCCCGCGCGGCCGCGCCTCCAAGGCGACCAACTGCGGGTGGCCGAGCCTAAGCCTGCGGCGTTTCTTGCCTCACCCCTCAGATCCTCGGTTCATGGCCTCATGGGCACTGGGCAGTGGAGCAATTGAAGCTTAGAAGGG AAGGGGAG AAGAGAATGGAAGCTCATGGGAAGAAGCGGAGGCGTGACTGCGGGATGCAGTTTTCTCGTTCCCGTCGGCGGCGGAGTGAGAGCTTGCAGAGATGCCGCATCCGTGATTTCTGTGTGGAGGG]




>consensus_8057#0
ACCAAACATGGGAATGCATCAAAATTATCAATTACGTCCTGAATATACAAATTCACAAAG
AGATTAATCAAAATCTCAAACAAAAAGTCATAAAGTCATAGATTACATTTCCCCATTGAC
TAAATCAATAAACCAGAAACCCCAAGCCGGCATCTGTTGCTTGCCTACCTCCGGCGCACC
AGCTTGCTCAACCCTCCTCGTTCGCGGACGATTGCTCAACCCCGCGCGGCCGCGCCTCCA
AGGCGACCAACTGCGGGTGGCCGAGCCTAAGCCTGCGGCGTTTCTTGCCTCACCCCTCAG
ATCCTCGGTTCATGGCCTCATGGGCACTGGGCAGTGGAGCAATTGAAGCTTAGAAGGGAA
GGGGAGAAGAGAATGGAAGCTCATGGGAAGAAGCGGAGGCGTGACTGCGGGATGCAGTTT
TCTCGTTTCCGTCGGCGGCGGAGTGAGAGCTTGCAGAGATGCCGCATCCGTGATTTCTGT
GTGGAGGG

clustalw multiple alignements is not computed in this case