These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8067#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2218 fasta sequence [GAGCTCCAATTGCAGGTGAATTCCAACTGTCAGTGCAATAGGGTCTATTGGGAGCAGTCTCCTTTTGGGTATTTTAGGTCAATATGATCCAAGATCTTGATTAGTGGTTTGTGAATATATTCCAAGATCTGGTAACCTGATATCATGTCTTTTTGGTCCAACAGGTAGATTTCGCCTCACATGAATCAATCGGACCTATTGTCAGTTTGTCACTAGGTGTTTGTACATGTTGTCTTTGTAGCATAATTAGTACTGATGACCAATTAGCAGCAGCTAACTCCATTCATGCTTTACAATGATTGATGAAATAAAGCATCTGCACTTTATCATCTGGACGACTTGTTGGCTGGTGCTCGCGGCGCTGGGAATACCTGTCGTATGTGCGCCGCTGATCTGAATAATGTTGTGTGATTTTAATCAAGTTGGATACTTGATTTGAATATATTGCAGATATCGTACCTACTTGCTCTGTTTGTTTGTTTGTTTTTTGGTTATATTTCTAGGCAATGCATTGTAAGTTGAAGGCCACCATCACAGTATCAGCTAAGGGTGTGCATTTGATCTTTACCTTGTAGAGGTCATCAAACTCTAATCGTACCTGAAACTTTGTGTATTTTAGTCTTTACCTGCCATGGTGAAAGATTTGTTGACTCAGTTTGATAGGTCGTTTTACTATATTACTGTCATTGTGATCGTGCTCGGTATGTAGATTTATTTATGCGGGATGCATATGCTGCCCAACATCATTAGGCCACTAACTTACTGGTATTGTCCCACACTAATTAAGTATTCTGACTCTACAAAAAACGACTTCAACTAAGGCACCCTATGCTAGCATGCTACACCTTGTTTTTATCTCACTAGTCACTAAGATAATTTTAGGCAAAAGATCAAGTAGATAACCCCCTATGCTAGCATGCTACACCCTGTTTTGATCTCACTAGTTACTAAGATAATTTTAGGCAAAAGATCAAGTAGATAACCAATAATTTACTTTGGTATCCTTGGCTACTTCAGGTTGTTGCCTTGTTGGATTGAGATGCCATCAAGGCATATGGTACGGATAATTAGCACTGACAGTAATTACATACTCAATTCAATCAGCAACACAGATCTGAGTGTGAGGAACAACACCAACCAGGCAACCACGTTCTGGTCAAAGCCAGGCAAGAATTCCTTGATGCCTCCAAGCTCAGGATAAAACAATGACGCTTCCGGTACACTTGCTATCCAGTTGAATACATTATGCGAACATCTTGCCATTTCTTTAACGATCTTTGATCTGAATAAACAACTCGTCTTCAGACATGGCGCCATCCGGGCGGACAGTTCATCGCCCTCGTTTTATATATCTAGATCTGAACACAACCTGCTGCACTGCATTACCATCCATCTCTTCTTCTTCCTCTTCTACTTGAGCTGAAGCTGAAGCTGCCATTGTCTTGCTGAGCTCGTTTGGNTCTCTTTGGTCTAGCTTGCAATGGCTAGCGTCGTGCAGTACCAGGCGGCGGCGGCGGCGACGGCGATGGCGTGCGAGGAGGAGTTCATTCCGCA-GGGCTGATCTCCTGCTTCGGGCGGTCGCTGTCGAGGGCGTCGTCGGGGCGACACCTGGAGTACTGCAGCAGGGACGTGAGCGGCGGCGGCGAGGATAGCCGGCGCATGGCGCAGGAGCGATCGGCGAGGGCGAAGCTGCGGTGGAAGGCCGTGGCGCAGGAGATCATGGCGAGGAGGAGCGGCGGCGGCGGCGGCGGATCAGGGCGGCGGAGGAAGACGGCGTTCAGCTACGACTCCAAGAGCTACGCGCTCAACTTCGACGACCAGGCCGCCGGCG-CCGAGTAAGAGCTCCAGCCTCCAGCTGCTACGTCGCCGGTGAGCTAGAGCTAGCTGCAGAGACGGGACAGACGAGCGCGTGCAATATCGCGCTCGCGCGCGACGGCCGGCCGGCCGGCGAGGGGACGGAGTGCTCG-CCGGTAGCTCCTCCGGTGACCTACCCGGTGGTGTGCATTGCATGCATGGATGGCGGGATCCATGTGAAGACAGAGAGAGATCAAGCTTGAAGAATGAAGAGCCTGAAGGGCGGTGGTTCTTGTTCGAGTTTTGTTTCTTTGGCTGTTTTTTTTTTCATTTTTGAGATTGTAAACGTATGCATCCTGACATCTTGAATTGTTGATGTGGTGCAGTAAGTAATAAAAAACTGAGGCATTTATTCAAAAAAAAA] [+] EMBL AK120026 [GAGCTCCAATTGCAGGTGAATTCCAACTGTCAGTGCAATAGGGTCTATTGGGAGCAGTCTCCTTTTGGGTATTTTAGGTCAATATGATCCAAGATCTTGATTAGTGGTTTGTGAATATATTCCAAGATCTGGTAACCTGATATCATGTCTTTTTGGTCCAACAGGTAGATTTCGCCTCACATGAATCAATCGGACCTATTGTCAGTTTGTCACTAGGTGTTTGTACATGTTGTCTTTGTAGCATAATTAGTACTGATGACCAATTAGCAGCAGCTAACTCCATTCATGCTTTACAATGATTGATGAAATAAAGCATCTGCACTTTATCATCTGGACGACTTGTTGGCTGGTGCTCGCGGCGCTGGGAATACCTGTCGTATGTGCGCCGCTGATCTGAATAATGTTGTGTGATTTTAATCAAGTTGGATACTTGATTTGAATATATTGCAGATATCGTACCTACTTGCTCTGTTTGTTTGTTTGTTTTTTGGTTATATTTCTAGGCAATGCATTGTAAGTTGAAGGCCACCATCACAGTATCAGCTAAGGGTGTGCATTTGATCTTTACCTTGTAGAGGTCATCAAACTCTAATCGTACCTGAAACTTTGTGTATTTTAGTCTTTACCTGCCATGGTGAAAGATTTGTTGACTCAGTTTGATAGGTCGTTTTACTATATTACTGTCATTGTGATCGTGCTCGGTATGTAGATTTATTTATGCGGGATGCATATGCTGCCCAACATCATTAGGCCACTAACTTACTGGTATTGTCCCACACTAATTAAGTATTCTGACTCTACAAAAAACGACTTCAACTAAGGCACCCTATGCTAGCATGCTACACCTTGTTTTTATCTCACTAGTCACTAAGATAATTTTAGGCAAAAGATCAAGTAGATAACCCCCTATGCTAGCATGCTACACCCTGTTTTGATCTCACTAGTTACTAAGATAATTTTAGGCAAAAGATCAAGTAGATAACCAATAATTTACTTTGGTATCCTTGGCTACTTCAGGTTGTTGCCTTGTTGGATTGAGATGCCATCAAGGCATATGGTACGGATAATTAGCACTGACAGTAATTACATACTCAATTCAATCAGCAACACAGATCTGAGTGTGAGGAACAACACCAACCAGGCAACCACGTTCTGGTCAAAGCCAGGCAAGAATTCCTTGATGCCTCCAAGCTCAGGATAAAACAATGACGCTTCCGGTACACTTGCTATCCAGTTGAATACATTATGCGAACATCTTGCCATTTCTTTAACGATCTTTGATCTGAATAAACAACTCGTCTTCAGACATGGCGCCATCCGGGCGGACAGTTCATCGCCCTCGTTTTATATATCTAGATCTGAACACAACCTGCTGCACTGCATTACCATCCATCTCTTCTTCTTCCTCTTCTACTTGAGCTGAAGCTGAAGCTGCCATTGTCTTGCTGAGCTCGTTTGGATCTCTTTGGTCTAGCTTGCAATGGCTAGCGTCGTGCAGTACCAGGCGGCGGCGGCGGCGACGGCGATGGCGTGCGAGGAGGAGTTCATTCCGCAGGGGCTGATCTCCTGCTTCGGGCGGTCGCTGTCGAGGGCGTCGTCGGGGCGACACCTGGAGTACTGCAGCAGGGACGTGAGCGGCGGCGGCGAGGATAGCCGGCGCATGGCGCAGGAGCGATCGGCGAGGGCGAAGCTGCGGTGGAAGGCCGTGGCGCAGGAGATCATGGCGAGGAGGAGCGGCGGCGGCGGCGGCGGATCAGGGCGGCGGAGGAAGACGGCGTTCAGCTACGACTCCAAGAGCTACGCGCTCAACTTCGACGACCAGGCCGCCGGCG CCGAGTAAGAGCTCCAGCCTCCAGCTGCTACGTCGCCGGTGAGCTAGAGCTAGCTGCAGAGACGGGACAGACGAGCGCGTGCAATATCGCGCTCGCGCGCGACGGCCGGCCGGCCGGCGAGGGGACGGAGTGCTCG CCGGTAGCTCCTCCGGTGACCTACCCGGTGGTGTGCATTGCATGCATGGATGGCGGGATCCATGTGAAGACAGAGAGAGATCAAGCTTGAAGAATGAAGAGCCTGAAGGGCGGTGGTTCTTGTTCGAGTTTTGTTTCTTTGGCTGCTTTTTTTTTCATTTTTGAGATTGTAAACGTATGCATCCTGACATCTTGAATTGTTGATGTGGTGCAGTAAGTAATAAAAAACTGAG ] [+] EMBL OSR14091A [ nnntnCTTCTTCTTCCTCTTCTACTTGAGCTGAAGCTGAAGCTGCCATTGTCTTGCTGAGCTCGTTTGGNTCTCTTTGGTCTAGCTTGCAATGGCTAGCGTCGTGCAGTACCAGGCGGCGGCGGCGGCGACGGCGATGGCGTGCGAGGAGGAGTTCATTCCGCA GGGCTGATCTCCTGCTTCGGGCGGTCGCTGTCGAGGGCGTCGTCGGGGCGACACCTGGAGTACTGCAGCAGGGACGTGAGCGGCGGCGGCGAGGATAGCCGGCGCATGGCGCAGGAGCGATCGGCGAGGGCGAA NTGCGGTGGAAGGCCGTGGCGCAGGAGATCATGGCGAGGAGGAGCGGCGGCGGCGG ] [+] EMBL OSR20951A [ CTTCTACTTGAGCTGAAGCTGAAGCTGCCATTGTCTTGCTGAGCTCGTTTGGNTCTCTTTGGTCTAGCTTGCAATGGCTAGCGTCGTGCAGTACCANGCGGCGGCGGCGGCGACGGCGATGGCGTNCGANGAGGAGTTCATTCCGCA GGGCTGATCTCCTGCTTCGGGCGGTCGCTGTCGAGGGCGTCGTCGGGGCGACACCTGGAGTACTGCAGCAGGGACGTNAGCGGCGGCGGCGAGGATA ] [+] EMBL AU184374 [ GCCGGCGCCCGAGTAA A CTCCAGCCTCCAGCTGNTACGTCGCCGGTGAGCTAGAGCTAGCTGCAGAGACGGGACAGACGAGCGCGTGCAATATCGCGCTCGCGCGCGACGGCCGGCCGGCCGGCGAGGGGACGGAGTGCTCG CCGGTAGCTCCTCCGGTGACCTACCCGGTGGTGTGCATTGCATGCATGGATGGCGGGATCCATGTGAAGACAGAGAGAGATCAAGCTTGAAGAATGAAGAGCCTGAAGGGCGGTGGTTCTTGTTCGAGTTTTGTTTCTTTGGCTGTTTTTTTTTTCATTTTTGAGATTGTAAACGTATGCATCCTGACATCTTGAATTGTTGATGTGGTGCAGTAAGTAATAAAAAACTGAGGCATTTATTCAAAAAAAAA] [+] EMBL AU184151 [ GAGCTCCAGCCTCCAGTTG TTCGTCGCCGGTGAGCTAGAGCTAGCTGCAGAGACGGG CAGACGAGCGCGTNCAATATCGCGCTCGCGCGCGACGGCCGGCCGGCCGGCGA GGGACGGAGTGCTCGNCCGGTAGCTCCTCCGGTGACCTACCCGGTGGTGTGCATTGCATGCATGGATGNCGGGATCCATGTGAAGACAGAGAGAGATCAAGCTT AAGAAT AAGAGCCTGAAGGGCGGTGGTTCTTGTTCGAG TTTG TTCTTTGGCTGTTTTTTTTTTCATTTTTGAGATTGT AACGTAT CATCCTTACATCTT AATTGTT ATGTGGT CAGT AGT AT AAAAACTGAGGCATTT TTCAAAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||