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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8140#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3201 fasta sequence
[AGTTTCTCCCAGCGCGCCGCAGCCGCCGCCGCCGGCGCACAACCCCAGCCATCACCTACTCCATACATATCCCCCCTCGTCCGGCCCACCGCTCCTCCTCGAGCAGCCTCTTCCTCCGGTGCGGGCCACGCGATGTCGCCGCCGGCAGCAGGAGGGCTCGCCGGAGCCCGCGGCGAGGGCGGCGGAGCAGGGGTGGGGAGGGTCTTCGTGGGCGCTGGGTGCAACCGCGTGGTGAACAACGTCTCCTGGGGAGCTTGCGGCCTCGTCGCCTTCGGCGCGCAGAACGCCGTCGCGCTCTTTTCCCCTTTGAGAGGTGTGATTGTGACGACGCTTCCGGGGCACAAGGCCACGGTGAACTGCACCCTTTGGTTGCCCACGAAGAAGGATGTGCTCCAAATCCGCTCCAGGGAGAGACACTATCTATTATCAGGAAGTTCTGATGGTATTATCATGGCATGGAAGATTGATTCTGGAAAAGGAGAGTGGACTCGTGCGTTGCAACTGCCTGTGATGCACAAAAAAGGGGTCACCTGTCTTGCTGGAAGGATGGTGTCAGATACTGTTTCAATATTTGCCTCCACCTCCTCAGATGGAACTGTGGTCATTTGGAAAATGGAAGATGAACCAACTAGTGTTGGCAGCTGTGAAGTGTCTTGTTTGCATTCTATATCCGTTGGTCCAAAGCCAATGGTTTCACTTTCATTAGCAGTATTGCCTGGGCAGGGAGGCCATCTCATTTTGGCAATGGGAGGTTTGGATCACAAGGTCCACATTTATTGTGGGGATCAGTCAGGCAAGTTCATTAAAGCTTGTCAGCTTAAAGGTCATTCTGATTGGATTAGAAGTTTAGACTTCTCTTTACCTGTGATGATGGGCAGTGAGGAGCACAGCCTTTTCCTTGTTAGCTCATCTCAGGATAGAACCATTCGGATCTGGAAAATGAATTCGGATGCTGTTTCTTCTGCTCACACAACACCCAGAAAGGAAGATATTGGGATTGCCTCCTATATTGAAGGTCCTTTGTTTGTGTCCAGTAATACACATTACCAGGTATCATTGGAGTCCCTTCTCGTTGGTCATGAGGACTGGGTGTATTCTGTAGAATGGCAGCCTCCTACGCTACTAACTGATGATGAAGCTCATCAGCCAATGAGCATATTATCTGCATCCATGGACAAGATGATGATGATATGGAAGCCAGAGAAAAATACCGGTCTTTGGATAAATTCAGTGACTGTTGGTGAGTTAAGTCACTCAGCACTGGGATTCTATGGTGGCCATTGGCAGCCTGATGGCAAATCCATCCTTGCACATGGATATGGTGGATCGTTTCATATGTGGAGGGATGTTGGACTGGGTTCTGAAAACTGGCAGCCTCAGATAGTCCCATCTGGTCATTTTGCACCTGTATCTGACTTAACATGGTCAAGATCTGGTGAATATCTGTTATCAGTCAGCCATGATCAGACAACACGCATATTTGCTCCTTGGAGAAGCCAAGTTAGCCCAGGGGATGTGACTTGTTGGCGTGAAATTGCTCGCCCTCAAATTCATGGGCACGATATTAACTGTGTGGCATTCATTCAGGGTACCGGGAACCACCGGTTCGTTAGTGGCGCCGATGAAAAGGTCTCTAGAGTCTTTGAAGCTCCTTTGTCATTTTTGAAGACCCTTCAACATGCAACTTTGTTGAAAACTGATAACTCTGGAGATTTTGACGATGTGCAAGTACTTGGAGCAAATATGTCTGCTCTTGGACTTTCACAGAAACCTATATATACACATGGACCAAGGGAAACCCAAAGCAGTATTTCTAATGACGGGCCAGATTCCATGGAGACCATTCCTGATGCAGTGCCAACTGTGTTCACTGAGCCTCCTGTAGAGGATCAACTAGCCTGGAATACTCTATGGCCTGAAACTCACAAACTTTATGGCCATGGAAATGAACTCTTCTCCATCTGCTGTGATCATGAAGGGAAGATCATTGCATCATCTTGCAAGGCTCAATCAGCACCAGTTGCTGAGATCTGGCTGTGGGAGGTTGGAACATGGAAAGCTGTTGGCCGCCTGCAATCTCACAACCTGACAGTTACACAGATGGAGTTTTCTCGTGACAATGCTTTTCTTTTGAGTGTATCAAGGGATCGTCATTTGTCTGTCTTCTCAATCAGGAAGACAGATGATGGAGCAGAGCATCATCTTGTTGCAAAGCTTGAAGCACACAAAAGAATTATATGGGCATGCTCATGGAACCCCTTCAGCTACGAATTTGCAACTGGATCAAGGGACAAGACCGTCAAGATATGGAGCGTTCAAGATTCATCTTCTGTCAAGCTGCTCGTGACGTTGCCTCAGTTCCACGACAGTGTGACAGCATTGGCCTGGACAGGCCGTGACCGTGCTAGTAATGCTGGCATTCTCGCTATTGGCATGGACAACGGAATGATCGAGCTCTGGAACATTTCAGGGGGGAGAGCCTCCACTGACAGCAGCGGCTCAGGTTCATCTCCGCTCAGCTTTGCATGCATGCTCCGTTTTGATCCTCTGCTGTGTCATGTATCAACTGTGCACCGTTTACGGTGGCAGAAATCTGACTCATCCGATGAGAAATCAGCGCTACAGTTAGCTTCTTGTGGAGCTGATCATTGTGTAAGGGTGTTTGAGGTCCGTGACATTTGAGAAAGTTATATGATGGTGTAGAGCTTGGCTCATGAGCTGCATCTAGTTCTTGC-AGAACATAGGCTTAGACATCTGGATCTCATTG-CCAAACTTTTATATGTGATTTGGCAGTGTTTGTCTTGCCAGTATCTTCATAGATGTGTTGTACTCCTGTCCCAAAAGTATAAGCCCTTCTAGAGTTTTTTCTTATGGAGATTATGGAGAGAGTTGAAATTAAACAAGGGATGGTTGAGATTGAATGAGATGAGGAAGTAGGCGAAGAAACTGAATGAGAGAAGTAGTTATATTTCGGGGCAAAATTTGAACGCTCGAAATAGCTACATGTGGGGGACAAAATGTAAACTAGTGTTTTTTTACGAAAATATTGCCATTGTCATAGTTGCCAACAG-AAAAATGCTATATAATGGCAATATTTTCATAGTCTACTTAAAGACATGTAGCATTGGTTGACTGATAAACGATGCAGTTTATTTGCCTTCAACTACAATTTGATAAACTGTTGAATAAAAAAAAAAAAAA]
[+] EMBL AK111820 [AGTTTCTCCCAGCGCGCCGCAGCCGCCGCCGCCGGCGCACAACCCCAGCCATCACCTACTCCATACATATCCCCCCTCGTCCGGCCCACCGCTCCTCCTCGAGCAGCCTCTTCCTCCGGTGCGGGCCACGCGATGTCGCCGCCGGCAGCAGGAGGGCTCGCCGGAGCCCGCGGCGAGGGCGGCGGAGCAGGGGTGGGGAGGGTCTTCGTGGGCGCTGGGTGCAACCGCGTGGTGAACAACGTCTCCTGGGGAGCTTGCGGCCTCGTCGCCTTCGGCGCGCAGAACGCCGTCGCGCTCTTTTCCCCTTTGAGAGGTGTGATTGTGACGACGCTTCCGGGGCACAAGGCCACGGTGAACTGCACCCTTTGGTTGCCCACGAAGAAGGATGTGCTCCAAATCCGCTCCAGGGAGAGACACTATCTATTATCAGGAAGTTCTGATGGTATTATCATGGCATGGAAGATTGATTCTGGAAAAGGAGAGTGGACTCGTGCGTTGCAACTGCCTGTGATGCACAAAAAAGGGGTCACCTGTCTTGCTGGAAGGATGGTGTCAGATACTGTTTCAATATTTGCCTCCACCTCCTCAGATGGAACTGTGGTCATTTGGAAAATGGAAGATGAACCAACTAGTGTTGGCAGCTGTGAAGTGTCTTGTTTGCATTCTATATCCGTTGGTCCAAAGCCAATGGTTTCACTTTCATTAGCAGTATTGCCTGGGCAGGGAGGCCATCTCATTTTGGCAATGGGAGGTTTGGATCACAAGGTCCACATTTATTGTGGGGATCAGTCAGGCAAGTTCATTAAAGCTTGTCAGCTTAAAGGTCATTCTGATTGGATTAGAAGTTTAGACTTCTCTTTACCTGTGATGATGGGCAGTGAGGAGCACAGCCTTTTCCTTGTTAGCTCATCTCAGGATAGAACCATTCGGATCTGGAAAATGAATTCGGATGCTGTTTCTTCTGCTCACACAACACCCAGAAAGGAAGATATTGGGATTGCCTCCTATATTGAAGGTCCTTTGTTTGTGTCCAGTAATACACATTACCAGGTATCATTGGAGTCCCTTCTCGTTGGTCATGAGGACTGGGTGTATTCTGTAGAATGGCAGCCTCCTACGCTACTAACTGATGATGAAGCTCATCAGCCAATGAGCATATTATCTGCATCCATGGACAAGATGATGATGATATGGAAGCCAGAGAAAAATACCGGTCTTTGGATAAATTCAGTGACTGTTGGTGAGTTAAGTCACTCAGCACTGGGATTCTATGGTGGCCATTGGCAGCCTGATGGCAAATCCATCCTTGCACATGGATATGGTGGATCGTTTCATATGTGGTGGGATGTTGGACTGGGTTCTGAAAACTGGCAGCCTCAGATAGTCCCATCTGGTCATTTTGCACCTGTATCTGACTTAACATGGTCAAGATCTGGTGAATATCTGTTATCAGTCAGCCATGATCAGACAACACGCATATTTGCTCCTTGGAGAAGCCAAGTTAGCCCAGGGGATGTGACTTGTTGGCGTGAAATTGCTCGCCCTCAAATTCATGGGCACGATATTAACTGTGTGGCATTCATTCAGGGTACCGGGAACCACCGGTTCGTTAGTGGCGCCGATGAAAAGGTCTCTAGAGTCTTTGAAGCTCCTTTGTCATTTTTGAAGACCCTTCAACATGCAACTTTGTTGAAAACTGATAACTCTGGAGATTTTGACGATGTGCAAGTACTTGGAGCAAATATGTCTGCTCTTGGACTTTCACAGAAACCTATATATACACATGGACCAAGGGAAACCCAAAGCAGTATTTCTAATGACGGGCCAGATTCCATGGAGACCATTCCTGATGCAGTGCCAACTGTGTTCACTGAGCCTCCTGTAGAGGATCAACTAGCCTGGAATACTCTATGGCCTGAAACTCACAAACTTTATGGCCATGGAAATGAACTCTTCTCCATCTGCTGTGATCATGAAGGGAAGATCATTGCATCATCTTGCAAGGCTCAATCAGCACCAGTTGCTGAGATCTGGCTGTGGGAGGTTGGAACATGGAAAGCTGTTGGCCGCCTGCAATCTCACAACCTGACAGTTACACAGATGGAGTTTTCTCGTGACAATGCTTTTCTTTTGAGTGTATCAAGGGATCGTCATTTGTCTGTCTTCTCAATCAGGAAGACAGATGATGGAGCAGAGCATCATCTTGTTGCAAAGCTTGAAGCACACAAAAGAATTATATGGGCATGCTCATGGAACCCCTTCAGCTACGAATTTGCAACTGGATCAAGGGACAAGACCGTCAAGATATGGAGCGTTCAAGATTCATCTTCTGTCAAGCTGCTCGTGACGTTGCCTCAGTTCCACGACAGTGTGACAGCATTGGCCTGGACAGGCCGTGACCGTGCTAGTAATGCTGGCATTCTCGCTATTGGCATGGACAACGGAATGATCGAGCTCTGGAACATTTCAGGGGGGAGAGCCTCCACTGACAGCAGCGGCTCAGGTTCATCTCCGCTCAGCTTTGCATGCATGCTCCGTTTTGATCCTCTGCTGTGTCATGTATCAACTGTGCACCGTTTACGGTGGCAGAAATCTGACTCATCCGATGAGAAATCAGCGCTACAGTTAGCTTCTTGTGGAGCTGATCATTGTGTAAGGGTGTTTGAGGTCCGTGACATTTGAGAAAGTTATATGATGGTGTAGAGCTTGGCTCATGAGCTGCATCTAGTTCTTGC AGAACATAGGCTTAGACATCTGGATCTCATTG CCAAACTTTTATATGTGATTTGGCAGTGTTTGTCTTGCCAGTATCTTCATAGATGTGTTGTACTCCTGTCCCAAAAGTATAAGCCCTTCTAGAGTTTTTTCTTATGGAGATTATGGAGAGAGTTGAAATTAAACAAGGGATGGTTGAGATTGAATGAGATGAGGAAGTAGGCGAAGAAACTGAATGAGAGAAGTAGTTATATTTCGGGGCAAAATTTGAACGCTCGAAATAGCTACATGTGGGGGACAAAATGTAAACTAGTGTTTTTTTACGAAAATATTGCCATTGTCATAGTTGCCAACAG AAAAATGCTATATAATGGCAATATTTTCATAGTCTACTTAAAGACATGTAGCATTGGTTGACTGATAAACGATGCAGTTTATTTGCCTTCAACTACAATTTGATAAACTGTTGAA ]
[+] EMBL AK101284 [ CTTCCTCCGGTGCGGGCCACGCGATGTCGCCGCCGGCAGCAGGAGGGCTCGCCGGAGCCCGCGGCGAGGGCGGCGGAGCAGGGGTGGGGAGGGTCTTCGTGGGCGCTGGGTGCAACCGCGTGGTGAACAACGTCTCCTGGGGAGCTTGCGGCCTCGTCGCCTTCGGCGCGCAGAACGCCGTCGCGCTCTTTTCCCCTTTGAGAGGTGAGATTGTGACGACGCTTCCGGGGCACAAGGCCACGGTGAACTGCACCCTTTGGTTGCCCACGAAGAAGGATGTGCTCCAAATCCGCTCCAGGGAGAGACACTATCTATTATCAGGAAGTTCTGATGGTATTATCATGGCATGGAAGATTGATTCTGGAAAAGGAGAGTGGACTCGTGCGTTGCAACTGCCTGTGATGCACAAAAAAGGGGTCACCTGTCTTGCTGGAAGGATGGTGTCAGATACTGTTTCAATATTTGCCTCCACCTCCTCAGATGGAACTGTGGTCATTTGGAAAATGGAAGATGAACCAACTAGTGTTGGCAGCTGTGAAGTGTCTTGTTTGCATTCTATATCCGTTGGTCCAAAGCCAATGGTTTCACTTTCATTAGCAGTATTGCCTGGGCAGGGAGGCCATCTCATTTTGGCAATGGGAGGTTTGGATCACAAGGTCCACATTTATTGTGGGGATCAGTCAGGCAAGTTCATTAAAGCTTGTCAGCTTAAAGGTCATTCTGATTGGATTAGAAGTTTAGACTTCTCTTTACCTGTGATGATGGGCAGTGAGGAGCACAGCCTTTTCCTTGTTAGCTCATCTCAGGATAGAACCATTCGGATCTGGAAAATGAATTCGGATGCTGTTTCTTCTGCTCACACAACACACAGAAAGGAAGATATTGGGATTGCCTCCTATATTGAAGGTCCTTTGTTTGTGTCCAGTAATACACATTACCAGGTATCATTGGAGTCCCTTCTCGTTGGTCATGAGGACTGGGTGTATTCTGTAGAATGGCAGCCTCCTACGCTACTAACTGATGATGAAGCTCATCAGCCAATGAGCATATTATCTGCATCCATGGACAAGATGATGATGATATGGAAGCCAGAGAAAAATACCGGTCTTTGGATAAATTCAGTGACTGTTGGTGAGTTAAGTCACTCAGCACTGGGATTCTATGGTGGCCATTGGCAGCCTGATGGCAAATCCATCCTTGCACATGGATATGGTGGATCGTTTCATATGTGGAGGGATGTTGGACTGGGTTCTGAAAACTGGCAGCCTCAGATAGTCCCATCTGGTCATTTTGCACCTGTATCTGACTTAACATGGTCAAGATCTGGTGAATATCTGTTATCAGTCAGCCATGATCAGACAACACGCATATTTGCTCCTTGGAGAAGCCAAGTTAGCCCAGGGGATGTGACTTGTTGGCGTGAAATTGCTCGCCCTCAAATTCATGGGCACGATATTAACTGTGTGGCATTCATTCAGGGTACCGGGAACCACCGGTTCGTTAGTGGCGCCGATGAAAAGGTCTCTAGAGTCTTTGAAGCTCCTTTGTCATTTTTGAAGACCCTTCAACATGCAACTTTGTTGAAAACTGATAACTCTGGAGATTTTGACGATGTGCAAGTACTTGGAGCAAATATGTCTGCTCTTGGACTTTCACAGAAACCTATATATACACATGGACCAAGGGAAACCCAAAGCAGTATTTCTAATGACGGGCCAGATTCCATGGAGACCATTCCTGATGCAGTGCCAACTGTGTTCACTGAGCCTCCTGTAGAGGATCAACTAGCCTGGAATACTCTATGGCCTGAAACTCACAAACTTTATGGCCATGGAAATGAACTCTTCTCCATCTGCTGTGATCATGAAGGGAAGATCATTGCATCATCTTGCAAGGCTCAATCAGCACCAGTTGCTGAGATCTGGCTGTGGGAGGTTGGAACATGGAAAGCTGTTGGCCGCCTGCAATCTCACAACCTGACAGTTACACAGATGGAGTTTTCTCGTGACAATGCTTTTCTTTTGAGTGTATCAAGGGATCGTCATTTGTCTGTCTTCTCAATCAGGAAGACAGATGATGGAGCAGAGCATCATCTTGTTGCAAAGCTTGAAGCACACAAAAGAATTATATGGGCATGCTCATGGAACCCCTTCAGCTACGAATTTGCAACTGGATCAAGGGACAAGACCGTCAAGATATGGAGCGTTCAAGATTCATCTTCTGTCAAGCTGCTCGTGACGTTGCCTCAGTTCCACGACAGTGTGACAGCATTGGCCTGGACAGGCCGTGACCGTGCTAGTAATGCTGGCATTCTCGCTATTGGCATGGACAACGGAATGATCGAGCTCTGGAACATTTCAGGGGGGAGAGCCTCCACTGACAGCAGCGGCTCAGGTTCATCTCCGCTCAGCTTTGCATGCATGCTCCGTTTTGATCCTCTGCTGTGTCATGTATCAACTGTGCACCGTTTACGGTGGCAGAAATCTGACTCATCCGATGAGAAATCAGCGCTACAGTTAGCTTCTTGTGGAGCTGATCATTGTGTAAGGGTGTTTGAGGTCCGTGACATTTGAGAAAGTTATATGATGGTGTAGAGCTTGGCTCATGAGCTGCATCTAGTTCTTGC AGAACATAGGCTTAGACATCTGGATCTCATTG CCAAACTTTTATATGTGATTTGGCAGTGTTTGTCTTGCCAGTATCTTCATAGATGTGTTGTACTCCTGTCCCAAAAGTATAAGCCCTTCTAGAGTTT ]
[+] EMBL OS0943A [ ATCCTTGCACATGGATATGGTGGATCGTTTCATATGTGGAGGGATGTTGGACTGGGTTCTGAAAACTGGCAGCCTCAGATAGTCCCATCTGGTCATTTTGCACCTGTATCTGACTTAACATGGTCAAGATCTGGTGAATATCTGTTATCAGTCAGCCATGATCAGACAACACGCATATTTGCTCCTTGGAGAAGCCAAGTTAGCCCAGGGGATGTGACTTGTTGGCGTGAAATTGCTCGCCCTCAAATTCATGGGCACGATATTAACTGTGTGGCATTCATTCAGGGTACCGGGAACCACCGGTTCGTTAGTGGCGCCGATGAAAAGGTCTCTAGAGTCTTTGAAGCTCCTTT ]
[-] EMBL CA758969 [ GCATGCTCCGTTTTGATCCTTTGCTGTGTCATGTATCAACTGTGCACCGTTACCGGTGGCAGAAATCTGACTCATCCGATGAGAAATAAGCGCTACAGTTAGCTTCTTGTGGAGCTGATCATTGTGTAAGGGTGTTTGAGGTCCGTGACATTTGAGAAAGTTATATGATGGTGTAGAGCTTGGCTCATGAGCTGCATCTAGTTCTTGC AGAACATAGGCTTAGACATCTGGATCTCATTG CCAAACTTTTATATGTGATTTGGCAGTGTTTGTCTTGCCAGTATCTTCATAGATGTGTTGTACTCCTGTCCCAAAAGTATAAGCCCTTCTAGAGTTCTTTTTTATGGAGATTATGGAGAGAGTTGAAATTAACCAAGGGATGGTTGAGATTGAATGAGATGAGGAAGTAGGCGAAGAAACTGAATGAGAGAAGTAGTTATATTTCGGGGCAAAATTTGAACGCTCGAAATAGCTACATGTGGGGGACAAAATGTAAACTAGTGTTTTTTTACGAAAATATTGCCATTGTTATAGTTGCCAACAGAAAAAATGCTATATAATGGCAATATTTTCATAGTCTACTTAAAGACATGTAGCAGTGGTTGACTGATAAACGATGCAGTTTATTTGCCTTCAACTACAATTTGATAAACTGTTGAATAAAAAAAAAAAAAA]
[+] EMBL BM420347 [ CAACTGTGCACCGTTTACGGT GCAGAAATCTGACTCATCCGATGAGAAATCAGCGCTACAGTTAGCTTCTTGTGGA CTGATCNTTGTGTAAGGGTGTTTGAGGTCCGTGACATTTGAGAAAGTTATATGATGGTGTAGAGCTTGGCTCATGAGCTGCATCTAGTTCTTGCAAGAACATAGGCTTAGACATCTGGATCTCNTTGCCCAAACTTTTATATGTGATTTGCCCGTGTTTGTCTTGCCCGTATCTTCATAGATGT TTGTACTCCTGTCCCCAAAGTATAAGCCCTTCTAGAGTTTTTTCTTATGGAGATTATGGAGAGAGTTGAAATTAAACAAGGGATGGTTGAGATTGAATGAGATGAGGAAGTAGCCGAAAAAAaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||