cluster # 8147

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8147 cluster # 8147 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8147#0 length = 1727 sequences # 5
consensusID : consensus_8147#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1727
fasta sequence
                              [AAAACGAGCCCCCAAATCCCAGAGAGGAGTCGCGAGCTTTTCATCAATCCTCTGATTTTCCCCCAGGTTTCCCCACCCGCAAAGAGCCTCAAAATTCCCCCTCCTCTGTCGCGACCGATCGCG-ACGACGGCGCCGGACGAGCAGACACCGCCGCCACGATGCCGCCCTCCACCGGCTCCGTCCCACCCGCCGCATCAACGCCGGCGGCTGGGGACGAGGCCACCGCCGCCGGGAGGGTACTCCTCGGCAGGTACGAGCTCGGCGGCCTCCTCGGCCGCGGCGCCTCCGCCAAGGTGTACCTCGCCCGCGACCTCCTCACCGGCCGCGACGTCGCCATCAAGTCCTTCCCCAACCCCCGCCACGGCGGCGGCCTCCGCGGCGGCGAGGAGGATGTCCTCCTCCGCCCCGCGCCCATCGAGCGGGAGGCGGCCATTCTCCCCAGGCTGCGCCACCGCCACGTGATGCGCCTCCGCGAGATTCTGGCCACGCGCAAGAAGGTCCACTTCGTCCTCGACCTCGCCGCCGGCGGCGAGCTCTTCTCCCTGCTCGACGCGTCCGGCCGCATGACGGAGGACCTCGCGCGGCACTACTTCCGGCAGCTCATCTCCGCCGTCCGGTACTGCCACTCCCGTGGCGTGTACCACCGCGACATCAAGCCGGAGAACCTCCTCCTCGACGACGCGGGCGACCTCAAGGTGGCCGACTTCGGCCTCGGCGCCGTCGCCGACGGCGCCCTCCACCACACCCTCTGCGGCACCCCGGCCTACGTGGCGCCGGAGATCCTGTCGAGGAAGGGGTACAACCCAGCGAAGGTGGACATCTGGTCCTGCGGCGTCGTCCTCTTCGTGCTCGCCGCGGGGTACCTCCCCTTCAACGACGCCAGCCTCGTCAACATGTACCGCAAGATCTACGCCGGCAAGTTCCGGTGCCCGGCCTGGTTCTCGCCGGAGCTCCGGTGCCTGGTCCGCCGCATCCTGGACCCCAACCCGGCGACCCGCATTGACACGGAGGAGATCATCACCCACCCGTGGTTCCGCCAGGACGCGAGCCACTTCGCGATGGCGCAGCTGATGCAGCACGGCCACGACGAGGAGGCCAAATTCAAGACCGAGTTCAAGGAGGACGACATGGCCCGGGACATGACGGCGTTCGACATACTCGCATGCTCCCCTGGCTCCGACCTCTCCGGCCTCTTCGGCGCCGAGCCGGG-GAAGGAGCGGGTGTTCGTCGGCGAGCCGGCGGCGGCGGTGCTATCCCGAGTGGAGGAGGCCGGGAAGAAGGAAGGGTACATGGTAACGAGAGAAGGGAAGAAGGGCACCGGGCCGGTGTACGTGAAAGGCGAGAACGGCGGCATTGTGGCCAAGGTCTGCGTGTTCAAGATCGCCGACGCGGTGTCC-GTCGTCG-AGGTGGTGAAAGGCTACGGCGCCGAGGCCG-CCCGGTTCTGGAAGGCCAGGCTCGAGCCGGCGATGAAGCCTCCGGCAGCCATCTGAGCTGCCGACGAGAGGGTGAGCTGGTTCGTTGCCGCGTGCTTG--CAAATTGCA-ATCGAGATTTGTTCTTGTGTTGTTCAGTGTAACCGTGTGAGTGATGTCTCCCGTCGGCGAATTGTTTGGGTTTTTTTGGGATGTATTTGTTCATGGACGGCGTCATGGAGGTGGTATGTAAGCACGATTTGGTGATGTCTGGGCTGGAAAATAAGAGGCAAAAAATTCCCTGCTCCTAAAGGGAAA]

[+] EMBL AK111746             [AAAACGAGCCCCCAAATCCCAGAGAGGAGTCGCGAGCTTTTCATCAATCCTCTGATTTTCCCCCAGGTTTCCCCACCCGCAAAGAGCCTCAAAATTCCCCCTCCTCTGTCGCGACCGATCGCG ACGACGGCGCCGGACGAGCAGACACCGCCGCCACGATGCCGCCCTCCACCGGCTCCGTCCCACCCGCCGCATCAACGCCGGCGGCTGGGGACGAGGCCACCGCCGCCGGGAGGGTACTCCTCGGCAGGTACGAGCTCGGCGGCCTCCTCGGCCGCGGCGCCTCCGCCAAGGTGTACCTCGCCCGCGACCTCCTCACCGGCCGCGACGTCGCCATCAAGTCCTTCCCCAACCCCCGCCACGGCGGCGGCCTCCGCGGCGGCGAGGAGGATGTCCTCCTCCGCCCCGCGCCCATCGAGCGGGAGGCGGCCATTCTCCCCAGGCTGCGCCACCGCCACGTGATGCGCCTCCGCGAGATTCTGGCCACGCGCAAGAAGGTCCACTTCGTCCTCGACCTCGCCGCCGGCGGCGAGCTCTTCTCCCTGCTCGACGCGTCCGGCCGCATGACGGAGGACCTCGCGCGGCACTACTTCCGGCAGCTCATCTCCGCCGTCCGGTACTGCCACTCCCGTGGCGTGTACCACCGCGACATCAAGCCGGAGAACCTCCTCCTCGACGACGCGGGCGACCTCAAGGTGGCCGACTTCGGCCTCGGCGCCGTCGCCGACGGCGCCCTCCACCACACCCTCTGCGGCACCCCGGCCTACGTGGCGCCGGAGATCCTGTCGAGGAAGGGGTACAACCCAGCGAAGGTGGACATCTGGTCCTGCGGCGTCGTCCTCTTCGTGCTCGCCGCGGGGTACCTCCCCTTCAACGACGCCAGCCTCGTCAACATGTACCGCAAGATCTACGCCGGCAAGTTCCGGTGCCCGGCCTGGTTCTCGCCGGAGCTCCGGTGCCTGGTCCGCCGCATCCTGGACCCCAACCCGGCGACCCGCATTGACACGGAGGAGATCATCACCCACCCGTGGTTCCGCCAGGACGCGAGCCACTTCGCGATGGCGCAGCTGATGCAGCACGGCCACGACGAGGAGGCCAAATTCAAGACCGAGTTCAAGGAGGACGACATGGCCCGGGACATGACGGCGTTCGACATACTCGCATGCTCCCCTGGCTCCGACCTCTCCGGCCTCTTCGGCGCCGAGCCGGG GAAGGAGCGGGTGTTCGTCGGCGAGCCGGCGGCGGCGGTGCTATCCCGAGTGGAGGAGGCCGGGAAGAAGGAAGGGTACATGGTAACGAGAGAAGGGAAGAAGGGCACCGGGCCGGTGTACGTGAAAGGCGAGAACGGCGGCATTGTGGCCAAGGTCTGCGTGTTCAAGATCGCCGACGCGGTGTCC GTCGTCG AGGTGGTGAAAGGCTACGGCGCCGAGGCCG CCCGGTTCTGGAAGGCCAGGCTCGAGCCGGCGATGAAGCCTCCGGCAGCCATCTGAGCTGCCGACGAGAGGGTGAGCTGGTTCGTTGCCGCGTGCTTG  CAAATTGCA ATCGAGATTTGTTCTTGTGTTGTTCAGTGTAACCGTGTGAGTGATGTCTCCCGTCGGCGAATTGTTTGGGTTTTTTTGGGATGTATTTGTTCATGGACGGCGTCATGGAGGTAGTATGTAAGCACGATTTGGTGATGTCTGGGCTGGAAAATAAGAGGCAAAAA                      ]
[+] EMBL AA754545             [                                                                      cnCCACCCTCAAAGAGCCTCAAAATTCCCCCTCCNNTGTCTNNACCGATNNCGNACTACGGCGNCGGACNANCAGACACCGCCGCCACGATGCCGCCCTCCACCGGCTCCGTCCCACCCGCCGCATCAACGCCGGCGGCTGGGGACGANGCCACCGCCGCCGGGAGGGTNCTCCTCGGCAGGTACGANCTCGGCGGCCTCCTCGGCCGCGGCGCCTCCGCCAAGGTGTNCCTCGCCCGCGACCTCCTCACCGGCCGCGACGTCGCCATCAAGTCNTTCTTTTTNCCCCGCCACGGCGGCGGCCTCCGCGGCGGCGANGANGATGTCCTCCTCCGCCCCGCGCCCATCGAGCGGGAGGCGGCCATTCTCCCCAGGCTGCGCCACCGCCACGTGATGCGCCTCCGCGAGATTCTGGCCACGCGCAAGAANGTCCACTTCGTCCTCGACCTCGCCGCCGGCGGCGANCTCTTCTCCCTGCTCGAC C TCCGGCCGCATGACGGAAGA CTC CGCGGNACTNCTTCCGGCAGCTCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB668129             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCGGCGACCCGCATTGACACGGAGGAGATCATCACCCACCCGTGGTTCCGCCAGGACGCGAGCCACTTCGCGATGGCGCAGCTGATGCAGCACGGCCACGACGAGGAGGCCAAATTCAAGACCGAGTTCAAGGAGGACGACATGGCCCGGGACATGACGGCGTTCGACATACTCGCATGCTCCCCTGGCTCCGACCTCTCCGGCCTCTTCGGCGCCGAGCCGGG GAAGGAGCGGGTGTTCGTCGGCGAGCCGGCGGCGGCGGTGCTATCCCGAGTGGAGGAGGCCGGGAAGAAGGAAGGGTACATGGTAACGAGAGAAGGGAAGAAGGGCACCGGGCCGGTGTACGTGAAAGGCGAGAACGGCGGCATTGTGGCCAAGGTCTGCGTGTTCAAGATCGCCGACGCGGTGTCC GTCGTCG AGGTGGTGAAAGGCTACGGCGCCGAGGCCG CCCGGTTCTGGAAGGCCAGGCTCGAGCCGGCGATGAAGCCTCCGGCAGCCATCTGAGCTGCCGACGAGAGGGTGAGCTGGTTCGTTGCCGCGTGCTTG  CAAATTGCA ATCGAGATTTGTTCTTGTGTTGTTCAGTGTAACCGTGTGAGTGATGTCTCCCGTCGGCGAATTGTTTGGGTTTTTTTGGGATGTATTTGTTCATGGACGGCGTCATGGAGGTGGTATGTAAGCACGATTTGGTGATGTTAGGGGTGGAAAATAAGAGGCAAAAAATTCCCTGCTCCTAAAGGG   ]
[+] EMBL OSC338               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAATTCAAGACCGAGTTCAAGGAGGACGACATGGCCCGGGACATGACGGCGTTCGACATACTCGCATGCTCCCCTGGCTCCGACCTCTCCGGCCTCTTCGGCGCCGAGCCGGGNGAAGGAGCGGGTNTTCGTCGGCGAGCCGGCGGCGNCGGTGCTATCCCGAGTGGAGGAGGCCGGGAAGAAGGAAGGGTACATGGTAACGAGAGAAGGGAAGAAGGGCACCGNGCCGGTGTACGTNAAAGGCGAGAACGGCGGCATTNTGGCCAAGGTCTGCNTGTTCAAGATCGCCGACGCGGTGTNC GTCGTCGAAGGTGGTGAAA                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BI813590             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   tattTCCCGA TGGAGGA GCCGGGAAGAAGGAAGGGTACATGGTAACGAGAGAAGGGAAGAAGGGCACCGGGCCGGTGTACGTGAAAGGCGAGAACGGCGGCATTGTGGCCAAGGTCTGCGTGTTCAAGATCGCCGACGCGGTGTCCAGTCGTCG AGGTGGTGAAAGGCTACGGCGCCGAGGCCGCCCCGGTTCTGGAAGGCCAGGCTCGAGCCGGCGATGAAGCCTCCGGCAGCCATCTGAGCTGCCGACGAGAGGGTGA CTGGTTCGTTGCCGCGTGCTTGCACAAATTGCACATCGAGATTTGTTCTTGTGTTGTTCAGTGTAACCGTGTGAGTGATGTCTCCCGTCGGCGAATTGTTTGGGTTTTTTTGGGATGTATTTGTTCATGGACGGCGTCATGGAGGTGGTATGTAAGCCCGATTTGGTGATGTCTGGGCTGGAAAATAAGAGGCCAAAAATTCCCTGCTCCAAAAaaaaaa]




>consensus_8147#0
AAAACGAGCCCCCAAATCCCAGAGAGGAGTCGCGAGCTTTTCATCAATCCTCTGATTTTC
CCCCAGGTTTCCCCACCCGCAAAGAGCCTCAAAATTCCCCCTCCTCTGTCGCGACCGATC
GCGACGACGGCGCCGGACGAGCAGACACCGCCGCCACGATGCCGCCCTCCACCGGCTCCG
TCCCACCCGCCGCATCAACGCCGGCGGCTGGGGACGAGGCCACCGCCGCCGGGAGGGTAC
TCCTCGGCAGGTACGAGCTCGGCGGCCTCCTCGGCCGCGGCGCCTCCGCCAAGGTGTACC
TCGCCCGCGACCTCCTCACCGGCCGCGACGTCGCCATCAAGTCCTTCCCCAACCCCCGCC
ACGGCGGCGGCCTCCGCGGCGGCGAGGAGGATGTCCTCCTCCGCCCCGCGCCCATCGAGC
GGGAGGCGGCCATTCTCCCCAGGCTGCGCCACCGCCACGTGATGCGCCTCCGCGAGATTC
TGGCCACGCGCAAGAAGGTCCACTTCGTCCTCGACCTCGCCGCCGGCGGCGAGCTCTTCT
CCCTGCTCGACGCGTCCGGCCGCATGACGGAGGACCTCGCGCGGCACTACTTCCGGCAGC
TCATCTCCGCCGTCCGGTACTGCCACTCCCGTGGCGTGTACCACCGCGACATCAAGCCGG
AGAACCTCCTCCTCGACGACGCGGGCGACCTCAAGGTGGCCGACTTCGGCCTCGGCGCCG
TCGCCGACGGCGCCCTCCACCACACCCTCTGCGGCACCCCGGCCTACGTGGCGCCGGAGA
TCCTGTCGAGGAAGGGGTACAACCCAGCGAAGGTGGACATCTGGTCCTGCGGCGTCGTCC
TCTTCGTGCTCGCCGCGGGGTACCTCCCCTTCAACGACGCCAGCCTCGTCAACATGTACC
GCAAGATCTACGCCGGCAAGTTCCGGTGCCCGGCCTGGTTCTCGCCGGAGCTCCGGTGCC
TGGTCCGCCGCATCCTGGACCCCAACCCGGCGACCCGCATTGACACGGAGGAGATCATCA
CCCACCCGTGGTTCCGCCAGGACGCGAGCCACTTCGCGATGGCGCAGCTGATGCAGCACG
GCCACGACGAGGAGGCCAAATTCAAGACCGAGTTCAAGGAGGACGACATGGCCCGGGACA
TGACGGCGTTCGACATACTCGCATGCTCCCCTGGCTCCGACCTCTCCGGCCTCTTCGGCG
CCGAGCCGGGGAAGGAGCGGGTGTTCGTCGGCGAGCCGGCGGCGGCGGTGCTATCCCGAG
TGGAGGAGGCCGGGAAGAAGGAAGGGTACATGGTAACGAGAGAAGGGAAGAAGGGCACCG
GGCCGGTGTACGTGAAAGGCGAGAACGGCGGCATTGTGGCCAAGGTCTGCGTGTTCAAGA
TCGCCGACGCGGTGTCCGTCGTCGAGGTGGTGAAAGGCTACGGCGCCGAGGCCGCCCGGT
TCTGGAAGGCCAGGCTCGAGCCGGCGATGAAGCCTCCGGCAGCCATCTGAGCTGCCGACG
AGAGGGTGAGCTGGTTCGTTGCCGCGTGCTTGCAAATTGCAATCGAGATTTGTTCTTGTG
TTGTTCAGTGTAACCGTGTGAGTGATGTCTCCCGTCGGCGAATTGTTTGGGTTTTTTTGG
GATGTATTTGTTCATGGACGGCGTCATGGAGGTGGTATGTAAGCACGATTTGGTGATGTC
TGGGCTGGAAAATAAGAGGCAAAAAATTCCCTGCTCCTAAAGGGAAA
clustalw multiple alignements is not computed in this case