These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8150#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2925 fasta sequence [ACTCGCTCCAGCCAGCAGCAGCAGCAGCAGCCACTGCTCGCGACGGAACAGACGACACCACCACGACGCCCGCGTCATAAAGGCATGGGCATTGTCGCAGGCTAGCCACAGCGACGGGGTAGCAGCAGCATCAGCAGCAGCAGCGGCAACAGCGACCGGCATTGATAGCGGCAGCTGAGGAAGGAAGAGGGCGCGCGGTCGCCGCAGGAGCGGAGCAGGGGGGGCATGGGCTGGGCGGGCTGAGCGCTGAGCAGGAGATGGCTGGAGAGCGACGCCCTCGGAGGCATTAATGGCGTCGTCCGCATCCTCCTCCTCCTCCCCATCCTCGCGGCCGCCGCTGATGGCTCTCCCCTCTTTTTACCGGCCCCCTTGGCCGTCCGAGAGGGGCGGCGAGCAGCGAGCCACCGACTGTTGGGCCGGATCCCCAGCGGCGGGAGGCGGCCGGGCGCGTGCCACCGCCATGGGCATCGACCTCAACAACACCGCGAGCGGCGGCGAGGAGGACGCGCCGGCGCCGGGGCCGGTGTGCCGGGATCTGTGGCACGCGTGCGCTGGGCCGGTGGTGTCGCTGCCGCGGCGGGGCAGCGCGGTCGTGTACCTGCCGCAGGGGCACCTCTCCGCGGCCGGCGCCGGCGGCGGGATCCGCGGGGAGGTGGCGGTTGCCCTCCCTCCCCACGTGGCGTGCCGCGTCGTGGACGTCGAGCTATGCGCGGATGCAGCGACGGACGAGGTGTACGCGCGACTGGCGCTGCGGGCGGAGGGCGAGGTATTTGAGAGGAACTTGCATGGTGGTGGAATCGAAAGGGAGGATGACATGGAGGATGGTGATGAGGAAAGGAAGTCCAGGATGCTGCACATGTTCTGCAAAACACTAACGGCCTCTGATACAAGCACACATGGAGGGTTCTCTGTTCCTCGTCGGGCTGCTGAGGATTGCTTTCCACCTCTGGACCACAAACAGCTAAGGCCTTCTCAAGAGCTTGTTGCCAAGGATTTGCATGGAGCAAAGTGGAGGTTCCGCCATATTTATAGAGGTCAACCTCGCAGGCATCTTTTAACAACTGGATGGAGCTCCTTTGTCAATAAAAAGAAACTGGTCTCAGGGGACGCGGTGTTATTTCTCCGGGGTGATGATGGTGAGCTAAGATTGGGTGTTCGAAGAGCTACTCAGCTTAAAAATGAAGCGATTTTCAAAGCTTTTAGTAGCGAAAGTTCAAAGATGCGCACACTGTCGGCTGTGGCTGATTCCTTGAAACATGGAAGTGTTTTTCACATTTGTTACAACCCAAGGGCTACTGCTTCTGAGTACGTTGTTCCATATTGGAAGTTCGTGAAAAGCTTCAACCATCCAGTTTGTATTGGAATGAGGTTCAAGTTTCATTTTGAGAGTGAAGATGTTAATGAGAGGCGTTCTGGAATGATTGCCGGTGTTAGTGAAGTAGACCCCATCAGATGGCCTGGTTCAAAGTGGAGAAGCCTTCTGGTTCGATGGGAGGATGCTACTGACTGCAACAGCCAAAATAGAGTATCTCCATGGGAGATTGAGATAGTTGGTGGTTCAATCTCTGTTGCTCATTCTCTGTCGGCATCCAGTTCTAAAAGAACCAAATTATGCCCTCAGGGCAATTTGGACGTGCCAGCTCTGTATGGAAATGGTCGTCCAGACTCGGTGGAAACTGAAAAGTTCCCCAGGGTCTTGCAAGGTCAAGAATTGATGGGTTCTAGGACCCATCGTGCTACTTGTTCTCCTCAGTCAATCGACATTACAAAAAGTAAGTCTTTTGATGCTTGGAGATTCCTTACTGATACACGAAGCTGCATGTTGGGCAGTTCAACAAGCAGACTTCCAGTGCAGTACTCTGGCTATACCCACCAATCTGTAAGCTTCGGTGAATCTATTGGATTCCCAGAGGTCTTGCAAGGTCAAGAAATTTCTCAGACAGTTCCTCCGTTTCAAGGAATGTTGCCTGATGCATGTTCAGCGAAAAGCAGATATGAATTAAAGAATTATGTGTGCACCCCAGCTACCATGAATGGACTATCATCTGCAAATGAAGGATATTGTCTCTCCCTGTCAACTGTGCCACCTTCTCCACCTTCCAGTCTTATGTTATACCAAACAGGGGTACCACAGCTTGAATTGGCAAGCAAGAACAATGACAAAAGTGGAAATGACAGCCAACCAGCCTTGCGACAGCACAAGTTGCTCAGTGAAACTAGCTGGGACCAGTTTAAAATTGGAAAGGCTTCAACACCTGGGAATGCTACTAAGCCTGGTAATGGTGGAA-GGGAGGTTGACAGAACTAGTTGCCGCCTTTTTGGTTTTTCCTTGACCGAGAAGATTATCCCAACAGACAAAGATGGTGAAAAGGAAGTGAGTTATGAAACTGATTGCCAAAATCCACGGATGCTAGACTTGTTTGGGTACAATTGCAGTACGCCTGGTGCTCTTCATGCCCTTTGTGCTGCTCCTTTGGGAATATGATGCTACTTGAGTAACTGGGAGGGATACGTACATGTGGAGACGCAGCCACTCCACGCTTCATCCCAGATGTAAACGGCATCGGTCTGGTTATGGTCCCACCGTTCCTGATGCTTTGCATGTAGGTATTGCTGCCTCACGCCTGAATACCTACGTGCGGTCAGGCGAATAAAGCGACTCGATTGTATGTTTGACTGCAGCTCTAGCTGTCGAGTCGGAAGGGCGATGATGTTTATCGTCGTTAATGTACCATCGGCACCCTGTTTATGCAGAAATGTGGACCTAATTATTATGAACTTATTTCCTTAGTTCTATGTATGGTTAGCTTCTGATCTAGACCTAGTTATGAGCCTATTTCAGAAGTGCTATGTATGGTTTGCTTGTCAACATTTGTTTCTGTATCGGTACAAATCACTATGTTTGTATGTTTATTATGCACTTCT] [+] EMBL AK072330 [ACTCGCTCCAGCCAGCAGCAGCAGCAGCAGCCACTGCTCGCGACGGAACAGACGACACCACCACGACGCCCGCGTCATAAAGGCATGGGCATTGTCGCAGGCTAGCCACAGCGACGGGGTAGCAGCAGCATCAGCAGCAGCAGCGGCAACAGCGACCGGCATTGATAGCGGCAGCTGAGGAAGGAAGAGGGCGCGCGGTCGCCGCAGGAGCGGAGCAGGGGGGGCATGGGCTGGGCGGGCTGAGCGCTGAGCAGGAGATGGCTGGAGAGCGACGCCCTCGGAGGCATTAATGGCGTCGTCCGCATCCTCCTCCTCCTCCCCATCCTCGCGGCCGCCGCTGATGGCTCTCCCCTCTTTTTACCGGCCCCCTTGGCCGTCCGAGAGGGGCGGCGAGCAGCGAGCCACCGACTGTTGGGCCGGATCCCCAGCGGCGGGAGGCGGCCGGGCGCGTGCCACCGCCATGGGCATCGACCTCAACAACACCGCGAGCGGCGGCGAGGAGGACGCGCCGGCGCCGGGGCCGGTGTGCCGGGATCTGTGGCACGCGTGCGCTGGGCCGGTGGTGTCGCTGCCGCGGCGGGGCAGCGCGGTCGTGTACCTGCCGCAGGGGCACCTCTCCGCGGCCGGCGCCGGCGGCGGGATCCGCGGGGAGGTGGCGGTTGCCCTCCCTCCCCACGTGGCGTGCCGCGTCGTGGACGTCGAGCTATGCGCGGATGCAGCGACGGACGAGGTGTACGCGCGACTGGCGCTGCGGGCGGAGGGCGAGGTATTTGAGAGGAACTTGCATGGTGGTGGAATCGAAAGGGAGGATGACATGGAGGATGGTGATGAGGAAAGGAAGTCCAGGATGCTGCACATGTTCTGCAAAACACTAACGGCCTCTGATACAAGCACACATGGAGGGTTCTCTGTTCCTCGTCGGGCTGCTGAGGATTGCTTTCCACCTCTGGACCACAAACAGCTAAGGCCTTCTCAAGAGCTTGTTGCCAAGGATTTGCATGGAGCAAAGTGGAGGTTCCGCCATATTTATAGAGGTCAACCTCGCAGGCATCTTTTAACAACTGGATGGAGCTCCTTTGTCAATAAAAAGAAACTGGTCTCAGGGGACGCGGTGTTATTTCTCCGGGGTGATGATGGTGAGCTAAGATTGGGTGTTCGAAGAGCTACTCAGCTTAAAAATGAAGCGATTTTCAAAGCTTTTAGTAGCGAAAGTTCAAAGATGCGCACACTGTCGGCTGTGGCTGATTCCTTGAAACATGGAAGTGTTTTTCACATTTGTTACAACCCAAGGGCTACTGCTTCTGAGTACGTTGTTCCATATTGGAAGTTCGTGAAAAGCTTCAACCATCCAGTTTGTATTGGAATGAGGTTCAAGTTTCATTTTGAGAGTGAAGATGTTAATGAGAGGCGTTCTGGAATGATTGCCGGTGTTAGTGAAGTAGACCCCATCAGATGGCCTGGTTCAAAGTGGAGAAGCCTTCTGGTTCGATGGGAGGATGCTACTGACTGCAACAGCCAAAATAGAGTATCTCCATGGGAGATTGAGATAGTTGGTGGTTCAATCTCTGTTGCTCATTCTCTGTCGGCATCCAGTTCTAAAAGAACCAAATTATGCCCTCAGGGCAATTTGGACGTGCCAGCTCTGTATGGAAATGGTCGTCCAGACTCGGTGGAAACTGAAAAGTTCCCCAGGGTCTTGCAAGGTCAAGAATTGATGGGTTCTAGGACCCATCGTGCTACTTGTTCTCCTCAGTCAATCGACATTACAAAAAGTAAGTCTTTTGATGCTTGGAGATTCCTTACTGATACACGAAGCTGCATGTTGGGCAGTTCAACAAGCAGACTTCCAGTGCAGTACTCTGGCTATACCCACCAATCTGTAAGCTTCGGTGAATCTATTGGATTCCCAGAGGTCTTGCAAGGTCAAGAAATTTCTCAGACAGTTCCTCCGTTTCAAGGAATGTTGCCTGATGCATGTTCAGCGAAAAGCAGATATGAATTAAAGAATTATGTGTGCACCCCAGCTACCATGAATGGACTATCATCTGCAAATGAAGGATATTGTCTCTCCCTGTCAACTGTGCCACCTTCTCCACCTTCCAGTCTTATGTTATACCAAACAGGGGTACCACAGCTTGAATTGGCAAGCAAGAACAATGACAAAAGTGGAAATGACAGCCAACCAGCCTTGCGACAGCACAAGTTGCTCAGTGAAACTAGCTGGGACCAGTTTAAAATTGGAAAGGCTTCAACACCTGGGAATGCTACTAAGCCTGGTAATGGTGGAA GGGAGGTTGACAGAACTAGTTGCCGCCTTTTTGGTTTTTCCTTGACCGAGAAGATTATCCCAACAGACAAAGATGGTGAAAAGGAAGTGAGTTATGAAACTGATTGCCAAAATCCACGGATGCTAGACTTGTTTGGGTACAATTGCAGTACGCCTGGTGCTCTTCATGCCCTTTGTGCTGCTCCTTTGGGAATATGATGCTACTTGAGTAACTGGGAGGGATACGTACATGTGGAGACGCAGCCACTCCACGCTTCATCCCAGATGTAAACGGCATCGGTCTGGTTATGGTCCCACCGTTCCTGATGCTTTGCATGTAGGTATTGCTGCCTCACGCCTGAATACCTACGTGCGGTCAGGCGAATAAAGCGACTCGATTGTATGTTTGACTGCAGCTCTAGCTGTCGAGTCGGAAGGGCGATGATGTTTATCGTCGTTAATGTACCATCGGCACCCTGTTTATGCAGAAATGTGGACCTAATTATTATGAACTTATTTCCTTAGTTCTATGTATGGTTAGCTTCTGATCTAGACCTAGTTATGAGCCTATTTCAGAAGTGCTATGTATGGTTTGCTTGTCAACATTTGTTTCTGTATCGGTACAAATCACTATGTTTGTATGTTTATTATGCACTTCT] [+] EMBL CB000680 [ ACGTTGTTCCATATTGGAAGTTCGTGAAAAGCTTCAACCATCCAGTTTGTATTGGAATGAGGTTCAAGTTTCATTTTGAGAGTGAAGATGTTAATGAGAGGCGTTCTGGAATGATTGCCGGTGTTAGTGAAGTAGACCCCATCAGATGGCCTGGTTCAAAGTGGAGAAGCCTTCTGGTTCGATGGGAGGATGCTACTGACTGCAACAGCCAAAATAGAGTATCTCCATGGGAGATTGAGATAGTTGGTGGTTCAATCTCTGTTGCTCATTCTCTGTCGGCAT ] [+] EMBL CA999797 [ ACGTTGTTCCATATTGGAAGTTCGTGAAAAGCTTCAACCATCCAGTTTGTATTGGAATGAGGTTCAAGTTTCATTTTGAGAGTGAAGATGTTAATGAGAGGCGTTCTGGAATGATTGCCGGTGTTAGTGAAGTAGACCCCATCAGATGGCCTGGTTCAAAGTGGAGAAGCCTTCTGGTTCGATGGGAGGATGCTACTGACTGCAACAGCCAAAATAG ] [+] EMBL AU083364 [ AAGANCCAAATTATGCCCTCAGGG AATTTGGACGTGCCAGCTCTGTATGGAAATGGTCGTCCAGACTCGGTGGAAACTGAAAAGTTCCCCAGGGTCTTGCAAGGTCAAGAATTGATGGGTTCTAGGACCCATCGTGCTACTTGTTCTCCTCAGTCAATCGACATTACAAAAAGTAAGTNTTTTGATGCTTGGAGATTCCTTACTGATACACGAAGCTGCATNTTGGGCAGTTCANCAAGCAGACTTTCAGTGCAGTACTCTGGNTATACCCACCAATCTNTAAGNTTCGGTG ] [+] EMBL CA766791 [ GGCAATTTGGACGTGCCAGCTCTGTATGGAAATGGTCGTCCAGACTCGGTGGAAACTGAAAAGTTCCCCAGGGTCTTGCAAGGTCAAGAATTGATGGGTTCTAGGACCCATCGTGTTACTTGTTCTCCTCAGTCAATCGACATTACAAAAAGTAAGTCTTTTGATGCTTGGAGATTCCTTACTGATACACGAAGCTGCATGTTGGGCAGTTCAACAAGCAGACTTCCAGTGCAGTACTCTGGCTATACCCACCAATCTGTAAGCTTCGGTGAATCTATTGGATTCCCAGAGGTCTTGCAAGGTCAAGAAATTTCTCAGACAGTTCCTCCGATTCAAGGAATGTTGCCTGATGCATGTTCAGCGAAAAGCAGATATGAATTAAAGAATTATGTGTGCACCCCAGCTACCATGAATGGACTATCATCTGCAAATGAAGGATATTGTCTCTCCCTGTCAACTGTGCCACCTTCTCCACCTTCCAGTCTTATGTTATACCAAACAGGGGTACCACAGCTTGAATTGGCAAGCAAGAACAATGACAAAAGTGGAAATGACAGCCAACCAGCCTTGCGACAGCACAAGTTGCTCAGTGAAACTAGCTGGGACCAGTTTAAAATTGGAAAGGCTTCAACACCTGGGAATGCTACTAAGCCTGGTAATGGTGGAANGGGAGGTTGACAGAACTAGTTGCCGCCTTTTTGGTTTTTCCTTGACCGAGAAGATTATCCCAACAGACAAAGATGGTGAAAAGGAAGTGAGTTATGAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||