cluster # 8154

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8154 cluster # 8154 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8154#0 length = 1337 sequences # 5
consensusID : consensus_8154#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1337
fasta sequence
                              [GTGTCCA-CTC-CTGCCCCCAGACTTTCTCCATTCCACCCCATCCTCGACTCGCAAGTACCCAGCTAAGATCAGGGAGCTCATCTCCAGGAGACGGCAATTAACAGGTAACTTCTCTAGTTCTCCTCGTCTCTTCTGCTCCATCTCCGGCGACCAGTGATTCTTGGTGTGCCACTACACTACTAGTGGTACTCCAACAAGTCTGACGGCCAATGCCAACTCAATCGCTGCTTTTCCCCAAAGGCGAATCTATCTGCATCTGGATTACCAAGGACGGCTAGTGAATAGAAGGGGGAGAGAGAGATGGACGGAGCAGCAGTTAGTGCTGCCACTGGGGTGATGGGTTCCCTCCTTGCCAAGCTATCTGCCTTGCTGGGAGAGGAATACAGGCTTCTGAAAGGTGTCAACTCTGACATTAGGTTCTTGAGAGATGAGCTGACTGCCATCAACAACTTTCTTATCAACATGTCAAATATGGAGGAGAACCTGGGTGAGCAGGAGAAGGAGTGGAGAAACAGGGTCCGAGAAATCGAGGATTGCATCGATTTATTCATGCGCAAATTCAATCATGGGGATGTGGATGCCAACTTTGTCCGCAGGACAGCAAAAAAGATAGGAATGTTATGGTCACGTCATGAAATTGCTAGCCAGATCCATCAACTTAAGGATTGTGTTAACGAAGAGAGTGCCCGTCGTTTGAGGTATAGATTTGGTGAAAGCAATGCCCGCATAGTTGAAATTGATCCTGGACTACCAGCACTCTATGTGGAAGCAGAGAAACTTGTTGGCATCCATGGCCCTATGGAGAAGATCATTGATTTGTTGACAAAACAGGATGGATCCTCACAACAGCTGAAAGTGGTTTCCATTGTGGGCTTTGGGGGCCTTGGCAAGACTACTCTTGCTAACCAAGTACTTAAAAAAATCAAGCATCAGTTTGATTGCACAGCTTTAGTATTTATTTCACGGAGTCCTGACATTAAGAAGATCTTATTTGTTTTGCTTAAAGATATGATCAACAAAAACAATTCTAATGATGAGAAGCACAAAAAAGTTGTTGGGATCAAGGCAGAAAAATCAGATGATGAGAAACAACTAATCAATAAGCTCAGAGAATACCTAACAAGTAGAAGGTGGGCACAAAAATAATTGGTTCTCTTTCATTTACTTTCCTGTTAAAGTCTTCATCTTAAATTTTTCAAGTCGTTTCCATTTGTTGAGGTCCCTTTTTCCTTTGCTGTACAATTTGATACAAGCCAATTCAAAACCCATGTAAATAGAATCATTACTCATATTTGTAATTAAAGGGTAAACTTGATAATATAAGACTTTGATGCCCT]

[+] EMBL CB678564             [GTGTCCACCTCTCTGCCCCCAGACTTTCTCCATTCCACCCCATCCTCGACTCGCAAGTACCCAGCTAAGATCAGGGAGCTCATCTCCAGGAGACGGCAATTAACAGGTAACTTCTCTAGTTCTCCTCGTCTCTTCTGCTCCATCTCCGGCGACCAGTGATTCTTGGTGTGCCACTACACTACTAGTGGTACTCCAACAAGTCTGACGGCCAATGCCAACTCAATCGCTGCTTTTCCCCAAAGGCGAATCTATCTGCATCTGGATTACCAAGGACGGCTAGTGAATAGAAGGGGGAGAGAGAGATGGACGGAGCAGCAGTTAGTGCTGCCACTGGGGTGATGGGTTCCCTCCTTGCCAAGCTATCTGCCTTGCTGGGAGAGGAATACAGGCTTCTGAAAGGTGTCAACTCTGACATTAGGTTCTTGAGAGATGAGCTGACTGCCATCAACAACTTTCTTATCAACATGTCAAATATGGAGGAGAACCTGGGTGAGCAGGAGAAGGAGTGGAGAAACAGGGTCCGAGAAATCGAGGATTGCATCGATTTATTCATGCGCAAATTCAATCATGGGGATGTGGATGCCAACTTTGTCCGCACGACAGCAAAAAAGATACGAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB678525             [ TGTCCA CTC CTGCCCCCAGACTTTCTCCATTCCACCCCATCCTCGACTCGCAAGTACCCAGCTAAGATCAGGGAGCTCATCTCCAGGAGACGGCAATTAACAGGTAACTTCTCTAGTTCTCCTCGTCTCTTCTGCTCCATCTCCGGCGACCAGTGATTCTTGGTGTGCCACTACACTACTAGTGGTACTCCAACAAGTCTGACGGCCAATGCCAACTCAATCGCTGCTTTTCCCCAAAGGCGAATCTATCTGCATCTGGATTACCAAGGACGGCTAGTGAATAGAAGGGGGAGAGAGAGATGGACGGAGCAGCAGTTAGTGCTGCCACTGGGGTGATGGGTTCCCTCCTTGCCAAGCTATCTGCCTTGCTGGGAGAGGAATACAGGCTTCTGAAAGGTGTCAACTCTGACATTAGGTTCTTGAGAGATGAGCTGACTGCCATCAACAACTTTCTTATCAACATGTCAAATATGGAGGAGAACCTGGGTGAGCAGGAGAAGGAGTGGAGAAACAGGGTCCGAGAAATCGAGGATTGCATCGATTTATTCATGCGCAAATTCAATCATGGGGATGTGGATGCCAACTTTGTCCGCAGGACAGCAAAAAAGATAGGAATGTTATGGTCACGTCATGAAATTGCTAGCCAGATCCATCAACTTAAGGATTGTGTTAACGAAGAGAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB676440             [                            TCCATTCCACCCCATCCTCGACTCGCAAGTACCCAGCTAAGATCAGGGAGCTCATCTCCAGGAGACGGCAATTAACAGGTAACTTCTCTAGTTCTCCTCGTCTCTTCTGCTCCATCTCCGGCGACCAGTGATTCTTGGTGTGCCACTACACTACTAGTGGTACTCCAACAAGTCTGACGGCCAATGCCAACTCAATCGCTGCTTTTCCCCAAAGGCGAATCTATCTGCATCTGGATTACCAAGGACGGCTAGTGAATAGAAGGGGGAGAGAGAGATGGACGGAGCAGCAGTTAGTGCTGCCACTGGGGTGATGGGTTCCCTCCTTGCCAAGCTATCTGCCTTGCTGGGAGAGGAATACAGGCTTCTGAAAGGTGTCAACTCTGACATTAGGTTCTTGAGAGATGAGCTGACTGCCATCAACAACTTTCTTATCAACATGTCAAATATGGAGGAGAACCTGGGTGAGCAGGAGAAGGAGTGGAGAAACAGGGTCCGAGAAATCGAGGATTGCATCGATTTATTCATGCGCAAATTCAATCATGGGGATGTGGATGCCAACTTTGTCCGCAGGACAGCAAAAAAGATAGGAATGTTATGGTCACGTCATGAAATTGCTAGCCAGATCCATCAACTTAAGGATTGTGTTAACGAAGAGAGTGCCCGTCGTTTGAGGTATAGATTTGGTGAAAGCAATGCCCGCATAGTTGAAATTGATCCTGGACTACCAGCACTCTATGTGGAAGCAGAGAAACTTGTTGGCATCCATGGCCCTATGGAGAAGATCATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB678565             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGGATTGTGTTAACGAAGAGAGTGCCCGTCGTTTGAGGTATAGATTTGGTGAAAGCAATGCCCGCATAGTTGAAATTGATCCTGGACTACCAGCACTTTATGTGGAAGCAGAGAAACTTGTTGGCATCCATGGCCCTATGGAGAAGATCATTGATTTGTTGACAAAACAGGATGGATCCTCACAACAGCTGAAAGTGGTTTCCATTGTGGGCTTTGGGGGCCTTGGCAAGACTACTCTTGCTAACCAAGTACTTAAAAAAATCAAGCATCAGTTTGATTGCACAGCTTTAGTATTTATTTCACGGAGTCCTGACATTAAGAAGATCTTATTTGTTTTGCTTAAAGATATGATCAACAAAAACAATTCTAATGATGAGAAGCACAAAAAAGTTGTTGGGATCAAGGCAGAAAAATCAGATGATGAGAAACAACTAATCAATAAGCTCAGAGAATACCTAACAAGTAGAAGGTGGGCACAAAAATAATTGGTTCTCTTTCATTTACTTTCCTGTTAAAGTCTTCATCTTAAATTTTTCAAGTCGTTTCCATTTGTTGAGGTCCCTTTTTCCTTTGCTGTACAATTTGATACAAGCCAATTCAAAACCCATGTAAATAGAATCATTACTCATATTTGTAATTAAAGGGTAAACTTGATAATATAAGACTTTGATGCCCT]
[-] EMBL CB678526             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATGGATCCTCCCAACAGGTGAAAGTGGTTTCCATTGTGGGCTTTGGGGGCCTTGGCAAGACTACTCTTGTTAACCAAGTACTTAAAAAAATCAAGCATCAGTTTGATTGCCCAGCTTTAGTATTTATTTCACGGAGTCCTGACACTAAGAAGATGTTATTTGTTTTGCTTAAAGATATGATCAACAAAATCAATTCTAATGATGAGAAGCACAAAAAAGTTGTTGGGATCAAGGCAGAAAAATCAGATGATGAGAAACAAATAATCAATAAGCTCAGAGAATACCTAACAAGTAGAAGGTGGGCACAAAAATAATTGGTTCTCTTTCATTTACTTTCCTGTTAAAGTGTTCATGTTAAATTTTTCAAGTGGTTTCCATCTGTTGAGGTCCCTTTTTCCGGAGATGTGCAATTTGATACAAGCCAATTCAAAACCCATGTAAATAGAATCATTACTCATAT                                             ]




>consensus_8154#0
GTGTCCACTCCTGCCCCCAGACTTTCTCCATTCCACCCCATCCTCGACTCGCAAGTACCC
AGCTAAGATCAGGGAGCTCATCTCCAGGAGACGGCAATTAACAGGTAACTTCTCTAGTTC
TCCTCGTCTCTTCTGCTCCATCTCCGGCGACCAGTGATTCTTGGTGTGCCACTACACTAC
TAGTGGTACTCCAACAAGTCTGACGGCCAATGCCAACTCAATCGCTGCTTTTCCCCAAAG
GCGAATCTATCTGCATCTGGATTACCAAGGACGGCTAGTGAATAGAAGGGGGAGAGAGAG
ATGGACGGAGCAGCAGTTAGTGCTGCCACTGGGGTGATGGGTTCCCTCCTTGCCAAGCTA
TCTGCCTTGCTGGGAGAGGAATACAGGCTTCTGAAAGGTGTCAACTCTGACATTAGGTTC
TTGAGAGATGAGCTGACTGCCATCAACAACTTTCTTATCAACATGTCAAATATGGAGGAG
AACCTGGGTGAGCAGGAGAAGGAGTGGAGAAACAGGGTCCGAGAAATCGAGGATTGCATC
GATTTATTCATGCGCAAATTCAATCATGGGGATGTGGATGCCAACTTTGTCCGCAGGACA
GCAAAAAAGATAGGAATGTTATGGTCACGTCATGAAATTGCTAGCCAGATCCATCAACTT
AAGGATTGTGTTAACGAAGAGAGTGCCCGTCGTTTGAGGTATAGATTTGGTGAAAGCAAT
GCCCGCATAGTTGAAATTGATCCTGGACTACCAGCACTCTATGTGGAAGCAGAGAAACTT
GTTGGCATCCATGGCCCTATGGAGAAGATCATTGATTTGTTGACAAAACAGGATGGATCC
TCACAACAGCTGAAAGTGGTTTCCATTGTGGGCTTTGGGGGCCTTGGCAAGACTACTCTT
GCTAACCAAGTACTTAAAAAAATCAAGCATCAGTTTGATTGCACAGCTTTAGTATTTATT
TCACGGAGTCCTGACATTAAGAAGATCTTATTTGTTTTGCTTAAAGATATGATCAACAAA
AACAATTCTAATGATGAGAAGCACAAAAAAGTTGTTGGGATCAAGGCAGAAAAATCAGAT
GATGAGAAACAACTAATCAATAAGCTCAGAGAATACCTAACAAGTAGAAGGTGGGCACAA
AAATAATTGGTTCTCTTTCATTTACTTTCCTGTTAAAGTCTTCATCTTAAATTTTTCAAG
TCGTTTCCATTTGTTGAGGTCCCTTTTTCCTTTGCTGTACAATTTGATACAAGCCAATTC
AAAACCCATGTAAATAGAATCATTACTCATATTTGTAATTAAAGGGTAAACTTGATAATA
TAAGACTTTGATGCCCT
clustalw multiple alignements is not computed in this case