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Oryza sativa
cluster # 8156 cluster # 8156       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8156#0 length = 2621 sequences # 3  
consensus_8156#1 length = 831 sequences # 1  
consensus_8156#2 length = 761 sequences # 1  

consensusID : consensus_8156#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2621
fasta sequence
                              [ACTCCACGGTTCAACTAACCACCAAATTACCAGACTACCCCTCGGAGCTCGAGGCCAAGGGCCGCCATGGATCGCCGGGACATGGCGAGCCACCGCGGCCGGAGTTCCACTCGTGGCCACGGATGGGGCCGAGGCTGGCGAGGTCGGGGAGAAGGCCGCGGCCTTGGTCTCAGCCGCGGCGCCGGCCCCTCACCGCCACCTCCTCCTTCCTCCTCCACCTCTTCCTTCCCGGCGGCGGCCAGCGCCACCGCGGCTGGTACCGGCGGCGACGCCCCGCCGATCGTGGGCAGCTGCCCCGACATGTGCCCAGCGAGGGAGAGGGCGCAGAGGGAGCGGCTGAGGGACCTGGCGGTGTTCGAGCGGGTGGGCGGCGACCCCGCGCGCACGTCCCCTTCCCTCGCCGTGAAGAAGGTGAGCCATCCATTTTTCTCCGTACTCATGTGGAGGCCATTCCTGATTTTTTTTTTCTTTTTGAACTTGCGGTTGGGTCGTGGTGATGCTTCACTGCTGGTCATTTTTGGTGCGTATCTGCTTGGATTGTTCTCTCCATGCAAATGGACAGGCTATAGCTTGGTTCCATTCCATGTGGTGGTTTAGTCTGTTTTGATTGGATTTGATATGGAGCTGGAAGCTTTTTTTTGTGCATGCAACTGTGCATGTATTTTTGCTTAAAAGGGTGATCAGTTGCCGTTAAGCATGTGTTGGAACAATCAACACTTTATGTTAGATGTAGCTATATAGTTACATATGCCACCAATAATGCAATAACAGCAATGCAGCACTAAATCTGATCTACGCTTGTCTTGTCCAATCACTGCCAGAGTGTAAGGAAGCTATTCGGGTAGCCTAGCCTTCAAGAGATTGAATGTACGATAGTGTCAGATTTATATTTATTTTGTTTGATTTCTTTTTATAGTTTATTGGATGAAATATAACCCTACTTAGTACTTACCTTGTACTAGTATTTTTGCAGGGGTGAAGATATGATGAAAGGACAGGATTATCAATTCATTTAATACTTATTTTTATCTTGAATATGTGGTCATGTTTGCAGATAAAAGAAAGCAATGTGCAAAAGCAGATTATGATTTTTTTTACATTATTTATTTAGCATGCCATTGTTATTAGGTAAAAAGAGCTTGTATCAACGAAAATAATAGTTATACAATGAGATATCATGTTCTGCACACTTGAGGTGAAACTGTCGGAATTCATTTACTTGCCACTGCAAACTTGAGTAAAAATGCCACTGAAAAATCATAAAAGGTGTGTAAGATAATGAATCTTTACCAACCACATAGAATAGCCAATTTGCCACCTGAAAACACTGTTATAATTACAAATTTGCACTACAGTTTCATGTGGTCTGAAAGATTTCATGAACCGCGTGTGTTTTAAGAGAATCAGGTAGCTATTTGAGAATTCTGTGTATCTCCGTTCCTTTTCTAACACTTGGTTTCCTGCTAGTTTTGCAGAACTATCTCTTCCACGAGTGTACAGGCATCAGATATACGCCCTCTCCCAGTCCTGCGAGAAACAATGGATTATCTTTTGCATTTATTGGATTCCTCAGAGCATCAGTTTGAGATAGTTCATGATTTTATATTTGATAGGACAAGGTCTGTGAGGCAAGACCTCAGTATTCAGAACATAGTGAATGCCCAAGCAATTCAAATATACGAGGATGTGATAAAGTTTCATATTCTATCCCATCAGAAGCTTTCTAGGTCTTCCCAGGATTCTGATGCTTCTTCCCTGTGTTACCTAAACATGGAGCAGCTAATGAAGTGCCTTCTTTCTCTGTTTGATATGTATGATGTAATTCACAAGAACAATTCACAGAGTAGTAAAGAGACTGAATATTATTCCTTCTACGTGCTTCTACATTTGGGCTGCAAGATACCCAAAATGGTAGATTCACTCTCTTTGTGGTATGGCCATCTATCTGCTTCAATTATACAATCAAAGGAAATGGTATTTGCTAGATCTATATTAAGATTCTACCACCTAGGAAACTTCAAGCGTTTCTTCTGCGCCATAGCAGCTGAAGGAACCGATCTTCAGCTGCGTCTGTTAGAACCTTTTCTCAATGAGGCTCGTGTTAGAGCATTAATGTACTTCAATCATAGTGGCTACAAACTTCAACACCACCCTTTGACACATTTATCAGAAATCCTAATGATCGAGGAGCTGGACCTGGAAACTCTTTGTAGATTATGTGGACTTGAAATTAGCAACAACGAAGATACGAAAGCTTTTGCTCCTAAACAGGCGAGTTTCTGCGTACCAGCATCAATTCCTCAAATTAATGGCATTTACATATCAAGGGAGAATCAAAGGTGAAAAAAATATTGTAGCGAATGTAAAATGTACTCCATTCTTCACTTGTTCAGTTGTGTGCTAAAGCACCTATACTTCCAAGTATCCAATACGGAAAGCAATTGATCCCAGTAAAAGAAAATTACGAATGATAACAGTACATTTTCTTGTATTCTCTCCAACAAAGTGTATTTTGTGAGCTTCGATGAGTAGTTCAG-TCAGTATTCTCTTCTGATGTTCTCACAATATGCTAATGGTTGCTGGTATTGTTGGTGATTTGATTCTCGTCTATTTTGCAAAAA]

[+] EMBL AK065347             [ACTCCACGGTTCAACTAACCACCAAATTACCAGACTACCCCTCGGAGCTCGAGGCCAAGGGCCGCCATGGATCGCCGGGACATGGCGAGCCACCGCGGCCGGAGTTCCACTCGTGGCCACGGATGGGGCCGAGGCTGGCGAGGTCGGGGAGAAGGCCGCGGCCTTGGTCTCAGCCGCGGCGCCGGCCCCTCACCGCCACCTCCTCCTTCCTCCTCCACCTCTTCCTTCCCGGCGGCGGCCAGCGCCACCGCGGCTGGTACCGGCGGCGACGCCCCGCCGATCGTGGGCAGCTGCCCCGACATGTGCCCAGCGAGGGAGAGGGCGCAGAGGGAGCGGCTGAGGGACCTGGCGGTGTTCGAGCGGGTGGGCGGCGACCCCGCGCGCACGTCCCCTTCCCTCGCCGTGAAGAAGGTGAGCCATCCATTTTTCTCCGTACTCATGTGGAGGCCATTCCTGATTTTTTTTTTCTTTTTGAACTTGCGGTTGGGTCGTGGTGATGCTTCACTGCTGGTCATTTTTGGTGCGTATCTGCTTGGATTGTTCTCTCCATGCAAATGGACAGGCTATAGCTTGGTTCCATTCCATGTGGTGGTTTAGTCTGTTTTGATTGGATTTGATATGGAGCTGGAAGCTTTTTTTTGTGCATGCAACTGTGCATGTATTTTTGCTTAAAAGGGTGATCAGTTGCCGTTAAGCATGTGTTGGAACAATCAACACTTTATGTTAGATGTAGCTATATAGTTACATATGCCACCAATAATGCAATAACAGCAATGCAGCACTAAATCTGATCTACGCTTGTCTTGTCCAATCACTGCCAGAGTGTAAGGAAGCTATTCGGGTAGCCTAGCCTTCAAGAGATTGAATGTACGATAGTGTCAGATTTATATTTATTTTGTTTGATTTCTTTTTATAGTTTATTGGATGAAATATAACCCTACTTAGTACTTACCTTGTACTAGTATTTTTGCAGGGGTGAAGATATGATGAAAGGACAGGATTATCAATTCATTTAATACTTATTTTTATCTTGAATATGTGGTCATGTTTGCAGATAAAAGAAAGCAATGTGCAAAAGCAGATTATGATTTTTTTTACATTATTTATTTAGCATGCCATTGTTATTAGGTAAAAAGAGCTTGTATCAACGAAAATAATAGTTATACAATGAGATATCATGTTCTGCACACTTGAGGTGAAACTGTCGGAATTCATTTACTTGCCACTGCAAACTTGAGTAAAAATGCCACTGAAAAATCATAAAAGGTGTGTAAGATAATGAATCTTTACCAACCACATAGAATAGCCAATTTGCCACCTGAAAACACTGTTATAATTACAAATTTGCACTACAGTTTCATGTGGTCTGAAAGATTTCATGAACCGCGTGTGTTTTAAGAGAATCAGGTAGCTATTTGAGAATTCTGTGTATCTCCGTTCCTTTTCTAACACTTGGTTTCCTGCTAGTTTTGCAGAACTATCTCTTCCACGAGTGTACAGGCATCAGATATACGCCCTCTCCCAGTCCTGCGAGAAACAATGGATTATCTTTTGCATTTATTGGATTCCTCAGAGCATCAGTTTGAGATAGTTCATGATTTTATATTTGATAGGACAAGGTCTGTGAGGCAAGACCTCAGTATTCAGAACATAGTGAATGCCCAAGCAATTCAAATATACGAGGATGTGATAAAGTTTCATATTCTATCCCATCAGAAGCTTTCTAGGTCTTCCCAGGATTCTGATGCTTCTTCCCTGTGTTACCTAAACATGGAGCAGCTAATGAAGTGCCTTCTTTCTCTGTTTGATATGTATGATGTAATTCACAAGAACAATTCACAGAGTAGTAAAGAGACTGAATATTATTCCTTCTACGTGCTTCTACATTTGGGCTGCAAGATACCCAAAATGGTAGATTCACTCTCTTTGTGGTATGGCCATCTATCTGCTTCAATTATACAATCAAAGGAAATGGTATTTGCTAGATCTATATTAAGATTCTACCACCTAGGAAACTTCAAGCGTTTCTTCTGCGCCATAGCAGCTGAAGGAACCGATCTTCAGCTGCGTCTGTTAGAACCTTTTCTCAATGAGGCTCGTGTTAGAGCATTAATGTACTTCAATCATAGTGGCTACAAACTTCAACACCACCCTTTGACACATTTATCAGAAATCCTAATGATCGAGGAGCTGGACCTGGAAACTCTTTGTAGATTATGTGGACTTGAAATTAGCAACAACGAAGATACGAAAGCTTTTGCTCCTAAACAGGCGAGTTTCTGCGTACCAGCATCAATTCCTCAAATTAATGGCATTTACATATCAAGGGAGAATCAAAGGTGAAAAAAATATTGTAGCGAATGTAAAATGTACTCCATTCTTCACTTGTTCAGTTGTGTGCTAAAGCACCTATACTTCCAAGTATCCAATACGGAAAGCAATTGATCCCAGTAAAAGAAAATTACGAATGATAACAGTACATTTTCTTGTATTCTCTCCAACAAAGTGTATTTTGTGAGCTTCGATGAGTAGTTCAG                                                                                     ]
[+] EMBL CA753518             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCCAAAATGGTAGATTCACTCTCTCTGTGGTATGGCCATCTATCTGCTTCAATTATACAATCAAAGGAAATGGTATTTGCTAGATCTATATAAAGATTCTACCACCTAGGAAACTTCAAGCGTTTCTTCTGCGCCATAGCAGCTGAAGGAACCGATCTTCAGCTGCGTCTGTTAGAACCTTTTCTCAATGAGGCTCGTGTTAGAGCATTAATGTACTTCAATCATAGTGGCTACAAACTTCAACACCACCCTTTGACACATTTATCAGAAATCCTAATGATCGAGGAGCTGGACCTGGAAACTCTTTGTAGATCATGTGGACTTGAAATTAGCAACAACGAAGATACTAAAGCTCTTGCTCCTAAACAGGCGAGTCTCTGCGTACCAGCATCACTGCCTCAAATTAATGGCATTTACATATCAAGGGAGAATCAAATGTGAAAAAAATATGGTAGCGAATGTAAAATGTACTCCATTCTCCACTTGTCCAGTTGTGTGCTAAAGCACCTATACTCCCCAGTATCCAATACGGAAAGCAATTGATCCCAGTAACA AAAAATACGAATGATAACNGAACATTTCCTTGTATTCTCTCCAAC AAGTGTATTTCGTGAGCTTC ATGAaaaa                                                                                          ]
[+] EMBL AU165095             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATCCCAGTAAAAGAAAATTACGAATGATAACAGTACATTTTCTTGTATTCTCTCCAACAAAGTGTATTTTGTGAGCTTCGATGAGTAGTT AGTTCAGTATTCTCTTCTGATGTTCTCACAATATGCTAATGGTTGCTGGTATTGTTGGTGATTTGATTCTCGTCTATTTTGCAAAAA]


>consensus_8156#0 ACTCCACGGTTCAACTAACCACCAAATTACCAGACTACCCCTCGGAGCTCGAGGCCAAGG GCCGCCATGGATCGCCGGGACATGGCGAGCCACCGCGGCCGGAGTTCCACTCGTGGCCAC GGATGGGGCCGAGGCTGGCGAGGTCGGGGAGAAGGCCGCGGCCTTGGTCTCAGCCGCGGC GCCGGCCCCTCACCGCCACCTCCTCCTTCCTCCTCCACCTCTTCCTTCCCGGCGGCGGCC AGCGCCACCGCGGCTGGTACCGGCGGCGACGCCCCGCCGATCGTGGGCAGCTGCCCCGAC ATGTGCCCAGCGAGGGAGAGGGCGCAGAGGGAGCGGCTGAGGGACCTGGCGGTGTTCGAG CGGGTGGGCGGCGACCCCGCGCGCACGTCCCCTTCCCTCGCCGTGAAGAAGGTGAGCCAT CCATTTTTCTCCGTACTCATGTGGAGGCCATTCCTGATTTTTTTTTTCTTTTTGAACTTG CGGTTGGGTCGTGGTGATGCTTCACTGCTGGTCATTTTTGGTGCGTATCTGCTTGGATTG TTCTCTCCATGCAAATGGACAGGCTATAGCTTGGTTCCATTCCATGTGGTGGTTTAGTCT GTTTTGATTGGATTTGATATGGAGCTGGAAGCTTTTTTTTGTGCATGCAACTGTGCATGT ATTTTTGCTTAAAAGGGTGATCAGTTGCCGTTAAGCATGTGTTGGAACAATCAACACTTT ATGTTAGATGTAGCTATATAGTTACATATGCCACCAATAATGCAATAACAGCAATGCAGC ACTAAATCTGATCTACGCTTGTCTTGTCCAATCACTGCCAGAGTGTAAGGAAGCTATTCG GGTAGCCTAGCCTTCAAGAGATTGAATGTACGATAGTGTCAGATTTATATTTATTTTGTT TGATTTCTTTTTATAGTTTATTGGATGAAATATAACCCTACTTAGTACTTACCTTGTACT AGTATTTTTGCAGGGGTGAAGATATGATGAAAGGACAGGATTATCAATTCATTTAATACT TATTTTTATCTTGAATATGTGGTCATGTTTGCAGATAAAAGAAAGCAATGTGCAAAAGCA GATTATGATTTTTTTTACATTATTTATTTAGCATGCCATTGTTATTAGGTAAAAAGAGCT TGTATCAACGAAAATAATAGTTATACAATGAGATATCATGTTCTGCACACTTGAGGTGAA ACTGTCGGAATTCATTTACTTGCCACTGCAAACTTGAGTAAAAATGCCACTGAAAAATCA TAAAAGGTGTGTAAGATAATGAATCTTTACCAACCACATAGAATAGCCAATTTGCCACCT GAAAACACTGTTATAATTACAAATTTGCACTACAGTTTCATGTGGTCTGAAAGATTTCAT GAACCGCGTGTGTTTTAAGAGAATCAGGTAGCTATTTGAGAATTCTGTGTATCTCCGTTC CTTTTCTAACACTTGGTTTCCTGCTAGTTTTGCAGAACTATCTCTTCCACGAGTGTACAG GCATCAGATATACGCCCTCTCCCAGTCCTGCGAGAAACAATGGATTATCTTTTGCATTTA TTGGATTCCTCAGAGCATCAGTTTGAGATAGTTCATGATTTTATATTTGATAGGACAAGG TCTGTGAGGCAAGACCTCAGTATTCAGAACATAGTGAATGCCCAAGCAATTCAAATATAC GAGGATGTGATAAAGTTTCATATTCTATCCCATCAGAAGCTTTCTAGGTCTTCCCAGGAT TCTGATGCTTCTTCCCTGTGTTACCTAAACATGGAGCAGCTAATGAAGTGCCTTCTTTCT CTGTTTGATATGTATGATGTAATTCACAAGAACAATTCACAGAGTAGTAAAGAGACTGAA TATTATTCCTTCTACGTGCTTCTACATTTGGGCTGCAAGATACCCAAAATGGTAGATTCA CTCTCTTTGTGGTATGGCCATCTATCTGCTTCAATTATACAATCAAAGGAAATGGTATTT GCTAGATCTATATTAAGATTCTACCACCTAGGAAACTTCAAGCGTTTCTTCTGCGCCATA GCAGCTGAAGGAACCGATCTTCAGCTGCGTCTGTTAGAACCTTTTCTCAATGAGGCTCGT GTTAGAGCATTAATGTACTTCAATCATAGTGGCTACAAACTTCAACACCACCCTTTGACA CATTTATCAGAAATCCTAATGATCGAGGAGCTGGACCTGGAAACTCTTTGTAGATTATGT GGACTTGAAATTAGCAACAACGAAGATACGAAAGCTTTTGCTCCTAAACAGGCGAGTTTC TGCGTACCAGCATCAATTCCTCAAATTAATGGCATTTACATATCAAGGGAGAATCAAAGG TGAAAAAAATATTGTAGCGAATGTAAAATGTACTCCATTCTTCACTTGTTCAGTTGTGTG CTAAAGCACCTATACTTCCAAGTATCCAATACGGAAAGCAATTGATCCCAGTAAAAGAAA ATTACGAATGATAACAGTACATTTTCTTGTATTCTCTCCAACAAAGTGTATTTTGTGAGC TTCGATGAGTAGTTCAGTCAGTATTCTCTTCTGATGTTCTCACAATATGCTAATGGTTGC TGGTATTGTTGGTGATTTGATTCTCGTCTATTTTGCAAAAA



consensusID : consensus_8156#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 831
fasta sequence
                              [ACCACCAAATTACCAGACTACCCCTCGGAGCTCGAGGCCAAGGGCCGCCATGGATCGCCGGGACATGGCGAGCCACCGCGGCCGGAGTTCCACTCGTGGCCACGGATGGGGCCGAGGCTGGCGAGGTCGGGGAGAAGGCCGCGGCCTTGGTCTCAGCCGCGGCGCCGGCCCCTCACCGCCACCTCCTCCTTCCTCCTCCACCTCTTCCTTCCCGGCGGCGGCCAGCGCCACCGCGGCTGGTACCGGCGGCGACGCCCCGCCGATCGTGGGCAGCTGCCCCGACATGTGCCCAGCGAGGGAGAGGGCGCAGAGGGAGCGGCTGAGGGACCTGGCGGTGTTCGAGCGGGTGGGCGGCGACCCCGCGCGCACGTCCCCTTCCCTCGCCGTGAAGAAGAACTATCTCTTCCACGAGTGTACAGGCATCAGATATACGCCCTCTCCCAGTCCTGCGAGAAACAATGGATTATCTTTTGCATTTATTGGATTCCTCAGAGCATCAGTTTGAGATAGTTCATGATTTTATATTTGATAGGACAAGGTCTGTGAGGCAAGACCTCAGTATTCAGAACATAGTGAATGCCCAAGCAATTCAAATATACGAGGATGTGATAAAGTTTCATATTCTATCCCATCAGAAGCTTTCTAGGTCTTCCCAGGATTCTGATGCTTCTTCCCTGTGTTACCTAAACATGGAGCAGCTAATGAAGTGCCTTCTTTCTCTGTTTGATATGTATGATGTAATTCACAAGAACAATTCACAGAGTAGTAAAGAGACTGAATATTATTCCTTCTACGTGCTTCTACATTTGGGCTGCAAGATACCCAAAATGG]

[+] EMBL CB648080             [ACCACCAAATTACCAGACTACCCCTCGGAGCTCGAGGCCAAGGGCCGCCATGGATCGCCGGGACATGGCGAGCCACCGCGGCCGGAGTTCCACTCGTGGCCACGGATGGGGCCGAGGCTGGCGAGGTCGGGGAGAAGGCCGCGGCCTTGGTCTCAGCCGCGGCGCCGGCCCCTCACCGCCACCTCCTCCTTCCTCCTCCACCTCTTCCTTCCCGGCGGCGGCCAGCGCCACCGCGGCTGGTACCGGCGGCGACGCCCCGCCGATCGTGGGCAGCTGCCCCGACATGTGCCCAGCGAGGGAGAGGGCGCAGAGGGAGCGGCTGAGGGACCTGGCGGTGTTCGAGCGGGTGGGCGGCGACCCCGCGCGCACGTCCCCTTCCCTCGCCGTGAAGAAGAACTATCTCTTCCACGAGTGTACAGGCATCAGATATACGCCCTCTCCCAGTCCTGCGAGAAACAATGGATTATCTTTTGCATTTATTGGATTCCTCAGAGCATCAGTTTGAGATAGTTCATGATTTTATATTTGATAGGACAAGGTCTGTGAGGCAAGACCTCAGTATTCAGAACATAGTGAATGCCCAAGCAATTCAAATATACGAGGATGTGATAAAGTTTCATATTCTATCCCATCAGAAGCTTTCTAGGTCTTCCCAGGATTCTGATGCTTCTTCCCTGTGTTACCTAAACATGGAGCAGCTAATGAAGTGCCTTCTTTCTCTGTTTGATATGTATGATGTAATTCACAAGAACAATTCACAGAGTAGTAAAGAGACTGAATATTATTCCTTCTACGTGCTTCTACATTTGGGCTGCAAGATACCCAAAATGG]


>consensus_8156#1 ACCACCAAATTACCAGACTACCCCTCGGAGCTCGAGGCCAAGGGCCGCCATGGATCGCCG GGACATGGCGAGCCACCGCGGCCGGAGTTCCACTCGTGGCCACGGATGGGGCCGAGGCTG GCGAGGTCGGGGAGAAGGCCGCGGCCTTGGTCTCAGCCGCGGCGCCGGCCCCTCACCGCC ACCTCCTCCTTCCTCCTCCACCTCTTCCTTCCCGGCGGCGGCCAGCGCCACCGCGGCTGG TACCGGCGGCGACGCCCCGCCGATCGTGGGCAGCTGCCCCGACATGTGCCCAGCGAGGGA GAGGGCGCAGAGGGAGCGGCTGAGGGACCTGGCGGTGTTCGAGCGGGTGGGCGGCGACCC CGCGCGCACGTCCCCTTCCCTCGCCGTGAAGAAGAACTATCTCTTCCACGAGTGTACAGG CATCAGATATACGCCCTCTCCCAGTCCTGCGAGAAACAATGGATTATCTTTTGCATTTAT TGGATTCCTCAGAGCATCAGTTTGAGATAGTTCATGATTTTATATTTGATAGGACAAGGT CTGTGAGGCAAGACCTCAGTATTCAGAACATAGTGAATGCCCAAGCAATTCAAATATACG AGGATGTGATAAAGTTTCATATTCTATCCCATCAGAAGCTTTCTAGGTCTTCCCAGGATT CTGATGCTTCTTCCCTGTGTTACCTAAACATGGAGCAGCTAATGAAGTGCCTTCTTTCTC TGTTTGATATGTATGATGTAATTCACAAGAACAATTCACAGAGTAGTAAAGAGACTGAAT ATTATTCCTTCTACGTGCTTCTACATTTGGGCTGCAAGATACCCAAAATGG



consensusID : consensus_8156#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 761
fasta sequence
                              [GGGTGGGCGGCGACCCCGCGCGCACGTCCCCTTTCCTCGCCGTGAAGAAGGGGTGAAGATATGATGAAAGGACAGGATTATCAATTCATTTAATACTTATTTTTATCTTGAATATGTGGTCATGTTTGCAGATAAAAGAAAGCAATGTGCAAAAGCAGATTATGATTTTTTTTACATTATTTATTTAGCATGCCATTGTTATTAGGTAAAAAGAGCTTGTATCAACGAAAATAATAGTTATACAATGAGATATCATGTTCTGCACACTTGAGGTGAAACTGTCGGAATTCATTTACTTGCCACTGCAAACTTGAGTAAAAATGCCACTGAAAAATCATAAAAGGTGTGTAAGATAATGAATCTTTACCAACCACATAGAATAGCCAATTTGCCACCTGAAAACACTGTTATAATTACAAATTTGCACTACAGTTTCATGTGGTCTGAAAGATTTCATGAACCGCGTGTGTTTTAAGAGAATCAGGTAGCTATTTGAGAATTCTGTGTATCTCCGTTCCTTTTCTAACACTTGGTTTCCTGCTAGTTTTGCAGAACTATCTCTTCCACGAGTGTACAGGCATCAGATATACGCCCTCTCCCAGTCCTGCGAGAAACAATGGATTATCTTTTGCATTTATTGGATTCCTCAGAGCATCAGTTTGAGATAGTTCATGATTTTATATTTGATAGGACAAGGTCTGTGAGGCAAGACCTCAATATTCAGAACATAGTGAATGCCCAAGCAATTCAAATATACGAGG]

[+] EMBL CB000481             [GGGTGGGCGGCGACCCCGCGCGCACGTCCCCTTTCCTCGCCGTGAAGAAGGGGTGAAGATATGATGAAAGGACAGGATTATCAATTCATTTAATACTTATTTTTATCTTGAATATGTGGTCATGTTTGCAGATAAAAGAAAGCAATGTGCAAAAGCAGATTATGATTTTTTTTACATTATTTATTTAGCATGCCATTGTTATTAGGTAAAAAGAGCTTGTATCAACGAAAATAATAGTTATACAATGAGATATCATGTTCTGCACACTTGAGGTGAAACTGTCGGAATTCATTTACTTGCCACTGCAAACTTGAGTAAAAATGCCACTGAAAAATCATAAAAGGTGTGTAAGATAATGAATCTTTACCAACCACATAGAATAGCCAATTTGCCACCTGAAAACACTGTTATAATTACAAATTTGCACTACAGTTTCATGTGGTCTGAAAGATTTCATGAACCGCGTGTGTTTTAAGAGAATCAGGTAGCTATTTGAGAATTCTGTGTATCTCCGTTCCTTTTCTAACACTTGGTTTCCTGCTAGTTTTGCAGAACTATCTCTTCCACGAGTGTACAGGCATCAGATATACGCCCTCTCCCAGTCCTGCGAGAAACAATGGATTATCTTTTGCATTTATTGGATTCCTCAGAGCATCAGTTTGAGATAGTTCATGATTTTATATTTGATAGGACAAGGTCTGTGAGGCAAGACCTCAATATTCAGAACATAGTGAATGCCCAAGCAATTCAAATATACGAGG]


>consensus_8156#2 GGGTGGGCGGCGACCCCGCGCGCACGTCCCCTTTCCTCGCCGTGAAGAAGGGGTGAAGAT ATGATGAAAGGACAGGATTATCAATTCATTTAATACTTATTTTTATCTTGAATATGTGGT CATGTTTGCAGATAAAAGAAAGCAATGTGCAAAAGCAGATTATGATTTTTTTTACATTAT TTATTTAGCATGCCATTGTTATTAGGTAAAAAGAGCTTGTATCAACGAAAATAATAGTTA TACAATGAGATATCATGTTCTGCACACTTGAGGTGAAACTGTCGGAATTCATTTACTTGC CACTGCAAACTTGAGTAAAAATGCCACTGAAAAATCATAAAAGGTGTGTAAGATAATGAA TCTTTACCAACCACATAGAATAGCCAATTTGCCACCTGAAAACACTGTTATAATTACAAA TTTGCACTACAGTTTCATGTGGTCTGAAAGATTTCATGAACCGCGTGTGTTTTAAGAGAA TCAGGTAGCTATTTGAGAATTCTGTGTATCTCCGTTCCTTTTCTAACACTTGGTTTCCTG CTAGTTTTGCAGAACTATCTCTTCCACGAGTGTACAGGCATCAGATATACGCCCTCTCCC AGTCCTGCGAGAAACAATGGATTATCTTTTGCATTTATTGGATTCCTCAGAGCATCAGTT TGAGATAGTTCATGATTTTATATTTGATAGGACAAGGTCTGTGAGGCAAGACCTCAATAT TCAGAACATAGTGAATGCCCAAGCAATTCAAATATACGAGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8156#0      ACTCCACGGTTCAACTAACCACCAAATTACCAGACTACCCCTCGGAGCTCGAGGCCAAGG 60
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      GCCGCCATGGATCGCCGGGACATGGCGAGCCACCGCGGCCGGAGTTCCACTCGTGGCCAC 120
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      GGATGGGGCCGAGGCTGGCGAGGTCGGGGAGAAGGCCGCGGCCTTGGTCTCAGCCGCGGC 180
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      GCCGGCCCCTCACCGCCACCTCCTCCTTCCTCCTCCACCTCTTCCTTCCCGGCGGCGGCC 240
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      AGCGCCACCGCGGCTGGTACCGGCGGCGACGCCCCGCCGATCGTGGGCAGCTGCCCCGAC 300
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      ATGTGCCCAGCGAGGGAGAGGGCGCAGAGGGAGCGGCTGAGGGACCTGGCGGTGTTCGAG 360
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      CGGGTGGGCGGCGACCCCGCGCGCACGTCCCCTTCCCTCGCCGTGAAGAAGGTGAGCCAT 420
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      CCATTTTTCTCCGTACTCATGTGGAGGCCATTCCTGATTTTTTTTTTCTTTTTGAACTTG 480
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      CGGTTGGGTCGTGGTGATGCTTCACTGCTGGTCATTTTTGGTGCGTATCTGCTTGGATTG 540
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      TTCTCTCCATGCAAATGGACAGGCTATAGCTTGGTTCCATTCCATGTGGTGGTTTAGTCT 600
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      GTTTTGATTGGATTTGATATGGAGCTGGAAGCTTTTTTTTGTGCATGCAACTGTGCATGT 660
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      ATTTTTGCTTAAAAGGGTGATCAGTTGCCGTTAAGCATGTGTTGGAACAATCAACACTTT 720
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      ATGTTAGATGTAGCTATATAGTTACATATGCCACCAATAATGCAATAACAGCAATGCAGC 780
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      ACTAAATCTGATCTACGCTTGTCTTGTCCAATCACTGCCAGAGTGTAAGGAAGCTATTCG 840
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      GGTAGCCTAGCCTTCAAGAGATTGAATGTACGATAGTGTCAGATTTATATTTATTTTGTT 900
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      TGATTTCTTTTTATAGTTTATTGGATGAAATATAACCCTACTTAGTACTTACCTTGTACT 960
consensus_8156#2      ----------------------GGGTGGGCGGCGACCCCGCGC-GCACGTCCCCTTTCCT 37
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      AGTATTTTTGCAGGGGTGAAGATATGATGAAAGGACAGGATTATCAATTCATTTAATACT 1020
consensus_8156#2      CGCCGTGAAGAAGGGGTGAAGATATGATGAAAGGACAGGATTATCAATTCATTTAATACT 97
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      TATTTTTATCTTGAATATGTGGTCATGTTTGCAGATAAAAGAAAGCAATGTGCAAAAGCA 1080
consensus_8156#2      TATTTTTATCTTGAATATGTGGTCATGTTTGCAGATAAAAGAAAGCAATGTGCAAAAGCA 157
consensus_8156#1      ------------------------------------------------ACCACCAAATTA 12
                                                                          * ***  *

consensus_8156#0      GATTATGATTTTTTTTACATTATTTATTTAGCATGCCATTG-TTATTAGGTAAAAAGAGC 1139
consensus_8156#2      GATTATGATTTTTTTTACATTATTTATTTAGCATGCCATTG-TTATTAGGTAAAAAGAGC 216
consensus_8156#1      CCAGACTACCCCTCGGAGCTCGAGGCCAAGGGCCGCCATGGATCGCCGGGACATGGCGAG 72
                          *  *    *   *  *          *   ***** * *     **  *       

consensus_8156#0      TTGTATCAACGAAAATAATAGTTATA-CAATGA--GATATCATGTTCTGCACACTTGAGG 1196
consensus_8156#2      TTGTATCAACGAAAATAATAGTTATA-CAATGA--GATATCATGTTCTGCACACTTGAGG 273
consensus_8156#1      CCACCGCGGCCGGAGTTCCACTCGTGGCCACGGATGGGGCCGAGGCTGGCGAGGTCGGGG 132
                            *  *   * *   * *  *  * * *   *    *  *    **    * * **

consensus_8156#0      TGAAACTGTCGGAATTCATTTACTTGCCACTGCAAACTTGAGTAAAAATGCCACTGAAAA 1256
consensus_8156#2      TGAAACTGTCGGAATTCATTTACTTGCCACTGCAAACTTGAGTAAAAATGCCACTGAAAA 333
consensus_8156#1      AGAAGGCCGCGGCCTTGGTCT--CAGCCGCGGC--------GCCGGCCCCTCACCGCCAC 182
                       ***     ***  **  * *    *** * **        *         *** *  * 

consensus_8156#0      ATCATAAAAGGTGTGTAAGATAATGAATCTTTACCAACCACATAGAATAGCCAATTTGCC 1316
consensus_8156#2      ATCATAAAAGGTGTGTAAGATAATGAATCTTTACCAACCACATAGAATAGCCAATTTGCC 393
consensus_8156#1      CTCCTCC----TTCCTCCTCCACCTCTTCCTTCCCGGCGGCGGCCAGC-GCCACCGCGGC 237
                       ** *      *   *     *     ** ** **  *  *    *   ****    * *

consensus_8156#0      ACCTGAAAACACTGTTATAATTACAAATTTGCACTACAGTTTC---ATGTGGTCTGAAAG 1373
consensus_8156#2      ACCTGAAAACACTGTTATAATTACAAATTTGCACTACAGTTTC---ATGTGGTCTGAAAG 450
consensus_8156#1      TGGTACCGGCGGCGACGCCCCGCCGATCGTGGGCAGCTGCCCCGACATGTGCCCAGCGAG 297
                         *     *   *         * *   **  *  * *   *   *****  * *  **

consensus_8156#0      ATTTCATGAACCGCGTGTGTTTTAAGAGAATCAGGTAGCTATTTGAGAATTCTGTGTATC 1433
consensus_8156#2      ATTTCATGAACCGCGTGTGTTTTAAGAGAATCAGGTAGCTATTTGAGAATTCTGTGTATC 510
consensus_8156#1      GGAGAGGGCGCAGAGGGAGCGGCTGAGGGACCTGGCGG-TGTTCGAG----CGGGTGGGC 352
                             *  * * * * *        * * * **  * * ** ***    * *     *

consensus_8156#0      TCCGTTCCTTTTCTAACACTTGGTTTCCTGCTAGTTTTGCAGAACTATCTCTTCCACGAG 1493
consensus_8156#2      TCCGTTCCTTTTCTAACACTTGGTTTCCTGCTAGTTTTGCAGAACTATCTCTTCCACGAG 570
consensus_8156#1      GGCGACCCCGCGCGCACGTCCCCTTCCCTCGCCGTGAAGAAGAACTATCTCTTCCACGAG 412
                        **  **    *  **      ** ***    **   * ********************

consensus_8156#0      TGTACAGGCATCAGATATACGCCCTCTCCCAGTCCTGCGAGAAACAATGGATTATCTTTT 1553
consensus_8156#2      TGTACAGGCATCAGATATACGCCCTCTCCCAGTCCTGCGAGAAACAATGGATTATCTTTT 630
consensus_8156#1      TGTACAGGCATCAGATATACGCCCTCTCCCAGTCCTGCGAGAAACAATGGATTATCTTTT 472
                      ************************************************************

consensus_8156#0      GCATTTATTGGATTCCTCAGAGCATCAGTTTGAGATAGTTCATGATTTTATATTTGATAG 1613
consensus_8156#2      GCATTTATTGGATTCCTCAGAGCATCAGTTTGAGATAGTTCATGATTTTATATTTGATAG 690
consensus_8156#1      GCATTTATTGGATTCCTCAGAGCATCAGTTTGAGATAGTTCATGATTTTATATTTGATAG 532
                      ************************************************************

consensus_8156#0      GACAAGGTCTGTGAGGCAAGACCTCAGTATTCAGAACATAGTGAATGCCCAAGCAATTCA 1673
consensus_8156#2      GACAAGGTCTGTGAGGCAAGACCTCAATATTCAGAACATAGTGAATGCCCAAGCAATTCA 750
consensus_8156#1      GACAAGGTCTGTGAGGCAAGACCTCAGTATTCAGAACATAGTGAATGCCCAAGCAATTCA 592
                      ************************** *********************************

consensus_8156#0      AATATACGAGGATGTGATAAAGTTTCATATTCTATCCCATCAGAAGCTTTCTAGGTCTTC 1733
consensus_8156#2      AATATACGAGG------------------------------------------------- 761
consensus_8156#1      AATATACGAGGATGTGATAAAGTTTCATATTCTATCCCATCAGAAGCTTTCTAGGTCTTC 652
                      ***********                                                 

consensus_8156#0      CCAGGATTCTGATGCTTCTTCCCTGTGTTACCTAAACATGGAGCAGCTAATGAAGTGCCT 1793
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      CCAGGATTCTGATGCTTCTTCCCTGTGTTACCTAAACATGGAGCAGCTAATGAAGTGCCT 712
                                                                                  

consensus_8156#0      TCTTTCTCTGTTTGATATGTATGATGTAATTCACAAGAACAATTCACAGAGTAGTAAAGA 1853
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      TCTTTCTCTGTTTGATATGTATGATGTAATTCACAAGAACAATTCACAGAGTAGTAAAGA 772
                                                                                  

consensus_8156#0      GACTGAATATTATTCCTTCTACGTGCTTCTACATTTGGGCTGCAAGATACCCAAAATGGT 1913
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      GACTGAATATTATTCCTTCTACGTGCTTCTACATTTGGGCTGCAAGATACCCAAAATGG- 831
                                                                                  

consensus_8156#0      AGATTCACTCTCTTTGTGGTATGGCCATCTATCTGCTTCAATTATACAATCAAAGGAAAT 1973
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      GGTATTTGCTAGATCTATATTAAGATTCTACCACCTAGGAAACTTCAAGCGTTTCTTCTG 2033
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      CGCCATAGCAGCTGAAGGAACCGATCTTCAGCTGCGTCTGTTAGAACCTTTTCTCAATGA 2093
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      GGCTCGTGTTAGAGCATTAATGTACTTCAATCATAGTGGCTACAAACTTCAACACCACCC 2153
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      TTTGACACATTTATCAGAAATCCTAATGATCGAGGAGCTGGACCTGGAAACTCTTTGTAG 2213
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      ATTATGTGGACTTGAAATTAGCAACAACGAAGATACGAAAGCTTTTGCTCCTAAACAGGC 2273
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      GAGTTTCTGCGTACCAGCATCAATTCCTCAAATTAATGGCATTTACATATCAAGGGAGAA 2333
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      TCAAAGGTGAAAAAAATATTGTAGCGAATGTAAAATGTACTCCATTCTTCACTTGTTCAG 2393
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      TTGTGTGCTAAAGCACCTATACTTCCAAGTATCCAATACGGAAAGCAATTGATCCCAGTA 2453
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      AAAGAAAATTACGAATGATAACAGTACATTTTCTTGTATTCTCTCCAACAAAGTGTATTT 2513
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      TGTGAGCTTCGATGAGTAGTTCAGTCAGTATTCTCTTCTGATGTTCTCACAATATGCTAA 2573
consensus_8156#2      ------------------------------------------------------------
consensus_8156#1      ------------------------------------------------------------
                                                                                  

consensus_8156#0      TGGTTGCTGGTATTGTTGGTGATTTGATTCTCGTCTATTTTGCAAAAA 2621
consensus_8156#2      ------------------------------------------------
consensus_8156#1      ------------------------------------------------
                                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)