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Oryza sativa
cluster # 8164 cluster # 8164       Sequences # 5       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8164#0 length = 3507 sequences # 4  
 consensus_8164#1 length = 805 sequences # 1  
consensusID : consensus_8164#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 3507
fasta sequence 
                              [CAAACGCTGCCCCCTGCTGGGACCGGCTCGGCCATGGCTCGTCGGTGGCGGCGGCGGAGGAGGAGAGGAGGAGGAGGAGGAGGTGGAGGAGAAATTGCAGATCGAAACCGGTGCACTGTGCTTGCAACAAAAATTGTGGCTACAGAACTCTGTCAATGGAAGGAGTAGGGAGATGCTACAATAGAAATGATTTTTTTTCCTTTTTTTTTTCAGGGATACAACAGAAAGGAGTTGGTGGAAGAGTGAAATTGGAATTTATTATTCTCCAATTATTTTCTGTGAATCTGTTCTCAAATGTAGACAACATATCGTGGGGCAGATAAACCGGTGGAAATTCTCTGTGCCACCAATGATACAAGTACTTGAGTTGATGGATAGTCACTTCCCAGTCAACACAGGAGAATTGGTTTGATGCTTTGATGTTGATGGTACCACCATGGAGAATGCAAGTAAGAAGAAAGGTATTTATGGGTTAATGGTGCCACCACTGCGATCAGAAGAGTTCAAACAGTTAGTCACATGGTCAAAATTCAGCTATTGGGCCAAAAGAACTACATCCATTCTTGACCTAGTCAATAAGCAGCACTTATTCAATCAATTATTGTCTTATTGTTGTTCAATGTCATGTCATAGATTAGTTTCCTTGGCATGTGTTGACCGCAAGTCTGCAACGTAGACTTCACGGTAAAACACCATATGAAGTTCAAGCTGACAACTCTCAATGTATTGTCCAGAGAAGTTTTGTTATTTGGAACTGCGGCGAAAGGAATTTCCACGCTTTATTTCCAACCTGTCCTTCGGATGAATCTAGAGCTGATTGGTCTTTTCTGGGAGCCATGATGTGGAAAAGGAGCTCTTGCAGGGAAGTTATTACTTTGCTGATTATGTCTTTGTGGTTAGAAAGATGTTTAGGAACAGACAGCATCTCTGCAAATGAAACACTTCCAGATGGGCAGACCATAGTGTCCATGAAAAATGTGTTTGTACTTGGTTTCTTTAGCCCTGGAGCTTCAAGTCATCGATATGTTGGTATATGGTACAGCAACCCAGTAAATAGAACAATCGTATGGGTTGCTAACAGGAACGAACCACTATTAGATGCTTCAGGAGTCCTTATGTTTGATGTTAATGGAAACCTGGTCATTGCGCATGGAGGCAGATCACTCATAGTGGCTTATGGACAAGGAACCAAAGACATGAAAGCCACAATCCTGGATTCTGGTAATCTTGCCCTGAGCAGCATGGCTAACCCATCAAGGTATATATGGCAGAGTTTTGATTCTCCTACTGATACATGGCTCCCTGAAATGAAGATTGGACTCAGGACAACAAACCAAACACTCATTTCATGGTCGAGCATTGATGACCCAGCAATGGGGGATTACAAACTTGGAATGGATCCTGCTGGGCTGTCACATCCTGCTGGGCTGTCACAATTCATTGTCTGGTGGAGAGGGAATAATTTTTGGACCAGTGGACACTGGAGTGGTGACATGTTTTCTCTCATCCCAGAACTAAAATTTTTTACCACCATCCCCAATTTTCTTCAAATGTAACAATTCTACCAATGACATCACTTGCACATACTCTGCTAACCCATCCGATAGGATGACAAAGATTGTTTTGAATTCAACTGGATCATTAAGCATCATGCAGTTTGATTCTCTTGAGAAATCATGGATTTTGTTATGGAGACAGCCAAGTACTTGTGAAGTTCATAACCTATGTGGAGCTTTTGGTATATGCAATGACAATGATGCAGTGCCTAAGTGTTATTGTACAAAAGGATTTGTTCCACAGGACATAATAGCATATACTAATGGGTATACCAGGGAGGGCTGCAACAGGCAGACCAAGCTGCAATGTAGCAGTGACGAGTTCTTTGAGATTCCTAATGTACGGCTTCCTGATAATAGAAAGAAGCTGCCTGTTATGGGTCTTAGTGAGTGCAAACTGGCATGTTTGATGAACTGCTCTTGTACAGCTTATGCTTATTTGCAGTTGGATGGATGCAGCTTGTGGTATGGTGATCTTATGAACTTGCAGGATGGTTATGATGTTCATGGTGCAGGAACTCTATGCCTTCGTCTGGCAGCGTCAGAAGTAGAATCTGGAAGAAACTCAGGCTCGGGTCACAAAATGCTTTGGATGGCGTGTGTGATTCCACCTGTTGTAGTTCTTTCCTTTTGCTCCCTTTCCTTTGTTCTTTGGAGAAGACGGAGTCAAAACAAAGGTAAAGAAAATTTACATGCTCACCACTCCTTGATGACTCTGGATACGGACAGTGCAGTCAAACTTTGGGAGAGTGAAGAAGCAGGTTCTCAGTTTGTGCTGTTTTCCTTCTCCCAAATAGCAAATTCCACCAACAACTTTTCAGCTCAAAACAAGCTTGGTGAGGGGGGGTTTGGTCCTGTGTACAAGGGAAACTTACCTGATAGGCAGGATATTGCTGTCAAGAGGCTTGCAACAAATTCGGGACAAGGGTTAGTTGAATTTAAGAATGAGGTCCTGCTGATAGCAAAACTTCAACACGTAAATTTGGTTAGGCTTTTAGGCTGCTGCATCCAAGGGGAAGAAAAGATACTTATCTACGAGTACATGCCAAATAAAAGCTTGGATTTCTTCCTCTTTGAAAAATCAAGAAGTGTGGTATTGGACTGGAGAAAGCGAATACATATAATTGAAGGAATTGCTCATGGTCTTCTTTATCTTCACAAACATTCTAGACTGAGAATTATTCATAGGGACTTGAAAGCAAGCAACATTCTGTTAGACATTGATATGAACCCTAAGATCTCTGATTTTGGCTTGGCGAGAATATTTGGCTCTAAAGAAACTCAAGCTAATACAAACAGGGTTGTTGGGACATATGGTTACATGGCTCCTGAGTATGCCATGCAAGGCATTTTCTCGGTTAAGTCTGATGTGTTTAGCTTTGGGGTGTTGCTTTTGGAGATCGTCAGCGGAATGAGAAATGCAGGATCCCACCGACGTGGGCGCTCTCTTAACCTCCTTGGTCATGCCTGGGAGTTATGGAGGGAAG-GCAGATGGTTTGATCTCGTTGATCCATCAACACGTGATGCATATCCTGAGCATAGGGTACTGAGATGTGTTCATGTCGGCCTGATGT-GCGTCCAAGAGAACGCTGTTGATCGTCCCACTATGAGCGATGTCATCTCAATGCTTACTAGCGAAAGCATCACCTTACCTGATCCT-AGGCAGCCT-GCTTT-CCT-CT-CCAT-T-GTGCTTCCAGCCGAAAT-GGATGCCCATGAT-GGAT-CCTT-TT-CT-CAAAATGC-AAT-GACAATTACT-GATCT-GGAGGGT-AGAT-AAT-AAT-AT-CAT-GTCCA-C-CT-GTCCAGCAT-ATGCT-GTTCTTAAAGCTTGATCAAATCCATTTGGCATAATGTATTGTATGTTCTTACAGCTGGACATGCTTATTGATTGACAGAGAAAAATCTGAAAAAAAAAAAGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK111632             [CAAACGCTGCCCCCTGCTGGGACCGGCTCGGCCATGGCTCGTCGGTGGCGGCGGCGGAGGAGGAGAGGAGGAGGAGGAGGAGGTGGAGGAGAAATTGCAGATCGAAACCGGTGCACTGTGCTTGCAACAAAAATTGTGGCTACAGAACTCTGTCAATGGAAGGAGTAGGGAGATGCTACAATAGAAATGATTTTTTTTCCTTTTTTTTTTCAGGGATACAACAGAAAGGAGTTGGTGGAAGAGTGAAATTGGAATTTATTATTCTCCAATTATTTTCTGTGAATCTGTTCTCAAATGTAGACAACATATCGTGGGGCAGATAAACCGGTGGAAATTCTCTGTGCCACCAATGATACAAGTACTTGAGTTGATGGATAGTCACTTCCCAGTCAACACAGGAGAATTGGTTTGATGCTTTGATGTTGATGGTACCACCATGGAGAATGCAAGTAAGAAGAAAGGTATTTATGGGTTAATGGTGCCACCACTGCGATCAGAAGAGTTCAAACAGTTAGTCACATGGTCAAAATTCAGCTATTGGGCCAAAAGAACTACATCCATTCTTGACCTAGTCAATAAGCAGCACTTATTCAATCAATTATTGTCTTATTGTTGTTCAATGTCATGTCATAGATTAGTTTCCTTGGCATGTGTTGACCGCAAGTCTGCAACGTAGACTTCACGGTAAAACACCATATGAAGTTCAAGCTGACAACTCTCAATGTATTGTCCAGAGAAGTTTTGTTATTTGGAACTGCGGCGAAAGGAATTTCCACGCTTTATTTCCAACCTGTCCTTCGGATGAATCTAGAGCTGATTGGTCTTTTCTGGGAGCCATGATGTGGAAAAGGAGCTCTTGCAGGGAAGTTATTACTTTGCTGATTATGTCTTTGTGGTTAGAAAGATGTTTAGGAACAGACAGCATCTCTGCAAATGAAACACTTCCAGATGGGCAGACCATAGTGTCCATGAAAAATGTGTTTGTACTTGGTTTCTTTAGCCCTGGAGCTTCAAGTCATCGATATGTTGGTATATGGTACAGCAACCCAGTAAATAGAACAATCGTATGGGTTGCTAACAGGAACGAACCACTATTAGATGCTTCAGGAGTCCTTATGTTTGATGTTAATGGAAACCTGGTCATTGCGCATGGAGGCAGATCACTCATAGTGGCTTATGGACAAGGAACCAAAGACATGAAAGCCACAATCCTGGATTCTGGTAATCTTGCCCTGAGCAGCATGGCTAACCCATCAAGGTATATATGGCAGAGTTTTGATTCTCCTACTGATACATGGCTCCCTGAAATGAAGATTGGACTCAGGACAACAAACCAAACACTCATTTCATGGTCGAGCATTGATGACCCAGCAATGGGGGATTACAAACTTGGAATGGATCCTGCTGGGCTGTCACATCCTGCTGGGCTGTCACAATTCATTGTCTGGTGGAGAGGGAATAATTTTTGGACCAGTGGACACTGGAGTGGTGACATGTTTTCTCTCATCCCAGAACTAAAATTTTTTACCACCATCCCCAATTTTCTTCAAATGTAACAATTCTACCAATGACATCACTTGCACATACTCTGCTAACCCATCCGATAGGATGACAAAGATTGTTTTGAATTCAACTGGATCATTAAGCATCATGCAGTTTGATTCTCTTGAGAAATCATGGATTTTGTTATGGAGACAGCCAAGTACTTGTGAAGTTCATAACCTATGTGGAGCTTTTGGTATATGCAATGACAATGATGCAGTGCCTAAGTGTTATTGTACAAAAGGATTTGTTCCACAGGACATAATAGCATATACTAATGGGTATACCAGGGAGGGCTGCAACAGGCAGACCAAGCTGCAATGTAGCAGTGACGAGTTCTTTGAGATTCCTAATGTACGGCTTCCTGATAATAGAAAGAAGCTGCCTGTTATGGGTCTTAGTGAGTGCAAACTGGCATGTTTGATGAACTGCTCTTGTACAGCTTATGCTTATTTGCAGTTGGATGGATGCAGCTTGTGGTATGGTGATCTTATGAACTTGCAGGATGGTTATGATGTTCATGGTGCAGGAACTCTATGCCTTCGTCTGGCAGCGTCAGAAGTAGAATCTGGAAGAAACTCAGGCTCGGGTCACAAAATGCTTTGGATGGCGTGTGTGATTCCACCTGTTGTAGTTCTTTCCTTTTGCTCCCTTTCCTTTGTTCTTTGGAGAAGACGGAGTCAAAACAAAGGTAAAGAAAATTTACATGCTCACCACTCCTTGATGACTCTGGATACGGACAGTGCAGTCAAACTTTGGGAGAGTGAAGAAGCAGGTTCTCAGTTTGTGCTGTTTTCCTTCTCCCAAATAGCAAATTCCACCAACAACTTTTCAGCTCAAAACAAGCTTGGTGAGGGGGGGTTTGGTCCTGTGTACAAGGGAAACTTACCTGATAGGCAGGATATTGCTGTCAAGAGGCTTGCAACAAATTCGGGACAAGGGTTAGTTGAATTTAAGAATGAGGTCCTGCTGATAGCAAAACTTCAACACGTAAATTTGGTTAGGCTTTTAGGCTGCTGCATCCAAGGGGAAGAAAAGATACTTATCTACGAGTACATGCCAAATAAAAGCTTGGATTTCTTCCTCTTTGAAAAATCAAGAAGTGTGGTATTGGACTGGAGAAAGCGAATACATATAATTGAAGGAATTGCTCATGGTCTTCTTTATCTTCACAAACATTCTAGACTGAGAATTATTCATAGGGACTTGAAAGCAAGCAACATTCTGTTAGACATTGATATGAACCCTAAGATCTCTGATTTTGGCTTGGCGAGAATATTTGGCTCTAAAGAAACTCAAGCTAATACAAACAGGGTTGTTGGGACATATGGTTACATGGCTCCTGAGTATGCCATGCAAGGCATTTTCTCGGTTAAGTCTGATGTGTTTAGCTTTGGGGTGTTGCTTTTGGAGATCGTCAGCGGAATGAGAAATGCAGGATCCCACCGACGTGGGCGCTCTCTTAACCTCCTTGGTCATGCCTGGGAGTTATGGAGGGAAG GCAGATGGTTTGATCTCGTTGATCCATCAACACGTGATGCATATCCTGAGCATAGGGTACTGAGATGTGTTCATGTTGGCCTGATGT GCGTCCAAGAGAACGCTGTTGATCGTCCCACTATGAGCGATGTCATCTCAATGCTTACTAGCGAAAGCATCACCTTACCTGATCCT AGGCAGCCT GCTTT CCT CT CCAT T GTGCTTCCAGCCGAAAT GGATGCCCATGAT GGAT CCTT TT CT CAAAATGC AAT GACAATTACT GATCT GGAGGGT AGAT AAT AAT AT CAT GTCCA C CT GTCCAGCAT ATGCT GTTCTTAAAGCTTGATCAAATCCATTTGGCATAATGTATTGTATGTTCTTACAGCTGGACATGCTTATTGATTGACAGA                                                                            ]
[-] EMBL CB630312             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGGAATTGCTCATGGTCTTCTTTATCTTCACAAGCATTCTAGACTGAGAATTATTCATAGGGACTTGAAAGCAAGCAACATTCTGTTAGACATTGATATGAACCCTAAGATCTCTGATTTTGGCATGGCGAGAATATTTGGCTCCAAAGAAACTGAAGCTAATACAAACAGGGTTGTTGGGACATATGGTTACATGGCTCCTGAGTATGCCATGCAAGGCATTTTCTCGGTTAAGTCTGATGTGTTTAGCTTTGGGGTGTTGCTTTTGGAGATCGTCAGCGGAATGAGAAATGCAGGATCCCACCGACGTGGGCGCTCTCTTAACCTCCTTGGTCATGCCTGGGAGTTATGGAGGGAAG GCAGATGGTTTGATCTCGTTGATCCATCAACACGTGATGCATATCCTGAGCATAGGGTACTGAGATGTGTTCATGTCGGCCTGATGT GCGTCCAAGAGAACGCTGTTGATCGTCCCACTATGAGCGATGTCATCTCAATGCTTACTAGCGAAAGCATCACCTTACCTGATCCT AGGCAGCCT GCTTT CCT CT CCAT T GTGCTTTCAGCCGAAAT GGATGCCCATGAT GGAT CCTT TT CT CAAAATGC AAT GACAATTACT GATCT GGAGGGT AGAT AAT AAT AT CAT GTCCG CGCT GTCCAGCAT ATGCT GTTCTTAAAGCTTGATCAAATCCATTTGGCATAATGTATTGTATGTTCTTACAGAAGGACATGCTTATTGATTGAC                                                                               ]
[+] EMBL BM421923             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  cCGGAATGAGAAATGCAGGATCCCACCGACGTGGGCGCTCTCTTAACCTCCTTGGTCATGCCTGGGAGTTATGGAGGGAAGCCCAGATGGTTNGATCTCGTTGATCCATCAACACGTGATGCATATCCTGAGCATAGGGTACTGAGATGTGTTCATGTCGGCCTGATGTGGCGTCCAAGAGAACGCTGTTGATCGTCCCACTATGAGCGATGTCATCTCAATGCTTACTAGCGAAAGCATCACCTTACCTGATCCTAAGGCAGCCTGGCTTTGCCTGCTGCCATGTGGTGCTTTCAGCCGAAATGGGATGCCCATGATGGGATNCCTTGTTCCTGCAAAATGCAAATGGACAATTACTGGATCTGGGAGGGTAAGATAAATAAATAATGCATGGTCCACC CTGGTCCAGCATAATGCTGGTTCTTAAAGCTTGATCAAATCCATTTGGCATAATGTATTGTATGTTCTTACAGCTGGACATGCTTATTGCTTGCCAGAGAAAAATCTGAAAAAAAAAA                                                        ]
[+] EMBL AU057753             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATGT GCGTCCAAGAGAACGCTGTTGATCGTCCCACTATGAGCGATGTCATCTCAATGCTTACTAGCGAAAGCATCACCTTACCTGATCCT AGGCAGCCT GCTTT CCT CT CCAT T GTGCTTCCAGCCGAAAT GGATGCCCATGAT GGAT CCTT TT CT CAAAATGC AAT GACAATTACT GATCT GGAGGGT AGAT AAT AAT AT CAT GTCCA C CT GTCCAGCAT ATGCT GTTCTTAAAGCTTGATCAAATCCATTTGGCATAATGTATTGTATGTTCTTACAGCTGGACATGCTTATTGATTGACAGAGAAAAATCTGAAAATTGATGAGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_8164#0
CAAACGCTGCCCCCTGCTGGGACCGGCTCGGCCATGGCTCGTCGGTGGCGGCGGCGGAGG
AGGAGAGGAGGAGGAGGAGGAGGTGGAGGAGAAATTGCAGATCGAAACCGGTGCACTGTG
CTTGCAACAAAAATTGTGGCTACAGAACTCTGTCAATGGAAGGAGTAGGGAGATGCTACA
ATAGAAATGATTTTTTTTCCTTTTTTTTTTCAGGGATACAACAGAAAGGAGTTGGTGGAA
GAGTGAAATTGGAATTTATTATTCTCCAATTATTTTCTGTGAATCTGTTCTCAAATGTAG
ACAACATATCGTGGGGCAGATAAACCGGTGGAAATTCTCTGTGCCACCAATGATACAAGT
ACTTGAGTTGATGGATAGTCACTTCCCAGTCAACACAGGAGAATTGGTTTGATGCTTTGA
TGTTGATGGTACCACCATGGAGAATGCAAGTAAGAAGAAAGGTATTTATGGGTTAATGGT
GCCACCACTGCGATCAGAAGAGTTCAAACAGTTAGTCACATGGTCAAAATTCAGCTATTG
GGCCAAAAGAACTACATCCATTCTTGACCTAGTCAATAAGCAGCACTTATTCAATCAATT
ATTGTCTTATTGTTGTTCAATGTCATGTCATAGATTAGTTTCCTTGGCATGTGTTGACCG
CAAGTCTGCAACGTAGACTTCACGGTAAAACACCATATGAAGTTCAAGCTGACAACTCTC
AATGTATTGTCCAGAGAAGTTTTGTTATTTGGAACTGCGGCGAAAGGAATTTCCACGCTT
TATTTCCAACCTGTCCTTCGGATGAATCTAGAGCTGATTGGTCTTTTCTGGGAGCCATGA
TGTGGAAAAGGAGCTCTTGCAGGGAAGTTATTACTTTGCTGATTATGTCTTTGTGGTTAG
AAAGATGTTTAGGAACAGACAGCATCTCTGCAAATGAAACACTTCCAGATGGGCAGACCA
TAGTGTCCATGAAAAATGTGTTTGTACTTGGTTTCTTTAGCCCTGGAGCTTCAAGTCATC
GATATGTTGGTATATGGTACAGCAACCCAGTAAATAGAACAATCGTATGGGTTGCTAACA
GGAACGAACCACTATTAGATGCTTCAGGAGTCCTTATGTTTGATGTTAATGGAAACCTGG
TCATTGCGCATGGAGGCAGATCACTCATAGTGGCTTATGGACAAGGAACCAAAGACATGA
AAGCCACAATCCTGGATTCTGGTAATCTTGCCCTGAGCAGCATGGCTAACCCATCAAGGT
ATATATGGCAGAGTTTTGATTCTCCTACTGATACATGGCTCCCTGAAATGAAGATTGGAC
TCAGGACAACAAACCAAACACTCATTTCATGGTCGAGCATTGATGACCCAGCAATGGGGG
ATTACAAACTTGGAATGGATCCTGCTGGGCTGTCACATCCTGCTGGGCTGTCACAATTCA
TTGTCTGGTGGAGAGGGAATAATTTTTGGACCAGTGGACACTGGAGTGGTGACATGTTTT
CTCTCATCCCAGAACTAAAATTTTTTACCACCATCCCCAATTTTCTTCAAATGTAACAAT
TCTACCAATGACATCACTTGCACATACTCTGCTAACCCATCCGATAGGATGACAAAGATT
GTTTTGAATTCAACTGGATCATTAAGCATCATGCAGTTTGATTCTCTTGAGAAATCATGG
ATTTTGTTATGGAGACAGCCAAGTACTTGTGAAGTTCATAACCTATGTGGAGCTTTTGGT
ATATGCAATGACAATGATGCAGTGCCTAAGTGTTATTGTACAAAAGGATTTGTTCCACAG
GACATAATAGCATATACTAATGGGTATACCAGGGAGGGCTGCAACAGGCAGACCAAGCTG
CAATGTAGCAGTGACGAGTTCTTTGAGATTCCTAATGTACGGCTTCCTGATAATAGAAAG
AAGCTGCCTGTTATGGGTCTTAGTGAGTGCAAACTGGCATGTTTGATGAACTGCTCTTGT
ACAGCTTATGCTTATTTGCAGTTGGATGGATGCAGCTTGTGGTATGGTGATCTTATGAAC
TTGCAGGATGGTTATGATGTTCATGGTGCAGGAACTCTATGCCTTCGTCTGGCAGCGTCA
GAAGTAGAATCTGGAAGAAACTCAGGCTCGGGTCACAAAATGCTTTGGATGGCGTGTGTG
ATTCCACCTGTTGTAGTTCTTTCCTTTTGCTCCCTTTCCTTTGTTCTTTGGAGAAGACGG
AGTCAAAACAAAGGTAAAGAAAATTTACATGCTCACCACTCCTTGATGACTCTGGATACG
GACAGTGCAGTCAAACTTTGGGAGAGTGAAGAAGCAGGTTCTCAGTTTGTGCTGTTTTCC
TTCTCCCAAATAGCAAATTCCACCAACAACTTTTCAGCTCAAAACAAGCTTGGTGAGGGG
GGGTTTGGTCCTGTGTACAAGGGAAACTTACCTGATAGGCAGGATATTGCTGTCAAGAGG
CTTGCAACAAATTCGGGACAAGGGTTAGTTGAATTTAAGAATGAGGTCCTGCTGATAGCA
AAACTTCAACACGTAAATTTGGTTAGGCTTTTAGGCTGCTGCATCCAAGGGGAAGAAAAG
ATACTTATCTACGAGTACATGCCAAATAAAAGCTTGGATTTCTTCCTCTTTGAAAAATCA
AGAAGTGTGGTATTGGACTGGAGAAAGCGAATACATATAATTGAAGGAATTGCTCATGGT
CTTCTTTATCTTCACAAACATTCTAGACTGAGAATTATTCATAGGGACTTGAAAGCAAGC
AACATTCTGTTAGACATTGATATGAACCCTAAGATCTCTGATTTTGGCTTGGCGAGAATA
TTTGGCTCTAAAGAAACTCAAGCTAATACAAACAGGGTTGTTGGGACATATGGTTACATG
GCTCCTGAGTATGCCATGCAAGGCATTTTCTCGGTTAAGTCTGATGTGTTTAGCTTTGGG
GTGTTGCTTTTGGAGATCGTCAGCGGAATGAGAAATGCAGGATCCCACCGACGTGGGCGC
TCTCTTAACCTCCTTGGTCATGCCTGGGAGTTATGGAGGGAAGGCAGATGGTTTGATCTC
GTTGATCCATCAACACGTGATGCATATCCTGAGCATAGGGTACTGAGATGTGTTCATGTC
GGCCTGATGTGCGTCCAAGAGAACGCTGTTGATCGTCCCACTATGAGCGATGTCATCTCA
ATGCTTACTAGCGAAAGCATCACCTTACCTGATCCTAGGCAGCCTGCTTTCCTCTCCATT
GTGCTTCCAGCCGAAATGGATGCCCATGATGGATCCTTTTCTCAAAATGCAATGACAATT
ACTGATCTGGAGGGTAGATAATAATATCATGTCCACCTGTCCAGCATATGCTGTTCTTAA
AGCTTGATCAAATCCATTTGGCATAATGTATTGTATGTTCTTACAGCTGGACATGCTTAT
TGATTGACAGAGAAAAATCTGAAAAAAAAAAAGTTTCAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_8164#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 805
fasta sequence 
                              [GATCTTAATGGAAACCTGGTAATTGCACATGGAGGCAGATCACTCATAGTGGCTTATGGAAAAGGAGCCAAAGACATGAAAGCAACAATCCTGGATTCTGGTAATCTTGTCCTGAGCAGCATGGCTAACCGATCAAGGTATATGTGGCAGAGTTTTGATTCTCCTACTGATACATGGCTTCCAGAAATGAAGATTGGACTCAGGACAGCAAACCAATCTCTCATTTCATGGTGGAGCAATGATGACCCAGCAGTGGGGGACTACACCCTTGCAATGGACCCTTCTGGGTTGTCAAAACTCATTATCTGGTGGAAAGAGACTATATATTGGAGCAGTGCGCAATGGAACAGTAGTGAGTTGTCTCTCATCCCACAATTATCATCTTTTACACCCATCTCAATTTTCTTCAGGTGTAGTAATTTTACCAATGACATCTCTTGCACATACTCTGCCAACCCATCTGATAGGATGACAAAGATTTTGTTGAATCCAGCTGGATCGTTAAACATCATGCAGTTTGATTCTCTAGCACAGGTGTGGATTTTGGTATGGAGTGTACCAAGTACTTGTGAAGTTCATAACCTATGTGGAGCTTTTGGTGTATGTAATAACAGTAGAGTGCTCAAGTGTGTGTGTACAAGAGGATTTGTGCCACGAGACTTAGCGGCATATTCTAGTGGAAATACCTGGAAGGGTTGTACCAGGAAGATCAAGCTGCAATGTAGCAGTGACGAGTTCCATGAGATTCCTAATGCGCGACTTCCTGATAATGGAAAGAAGCTGACTGTTACAGGTCTTAGAGAGT]

[+] EMBL CB630311             [GATCTTAATGGAAACCTGGTAATTGCACATGGAGGCAGATCACTCATAGTGGCTTATGGAAAAGGAGCCAAAGACATGAAAGCAACAATCCTGGATTCTGGTAATCTTGTCCTGAGCAGCATGGCTAACCGATCAAGGTATATGTGGCAGAGTTTTGATTCTCCTACTGATACATGGCTTCCAGAAATGAAGATTGGACTCAGGACAGCAAACCAATCTCTCATTTCATGGTGGAGCAATGATGACCCAGCAGTGGGGGACTACACCCTTGCAATGGACCCTTCTGGGTTGTCAAAACTCATTATCTGGTGGAAAGAGACTATATATTGGAGCAGTGCGCAATGGAACAGTAGTGAGTTGTCTCTCATCCCACAATTATCATCTTTTACACCCATCTCAATTTTCTTCAGGTGTAGTAATTTTACCAATGACATCTCTTGCACATACTCTGCCAACCCATCTGATAGGATGACAAAGATTTTGTTGAATCCAGCTGGATCGTTAAACATCATGCAGTTTGATTCTCTAGCACAGGTGTGGATTTTGGTATGGAGTGTACCAAGTACTTGTGAAGTTCATAACCTATGTGGAGCTTTTGGTGTATGTAATAACAGTAGAGTGCTCAAGTGTGTGTGTACAAGAGGATTTGTGCCACGAGACTTAGCGGCATATTCTAGTGGAAATACCTGGAAGGGTTGTACCAGGAAGATCAAGCTGCAATGTAGCAGTGACGAGTTCCATGAGATTCCTAATGCGCGACTTCCTGATAATGGAAAGAAGCTGACTGTTACAGGTCTTAGAGAGT]




>consensus_8164#1
GATCTTAATGGAAACCTGGTAATTGCACATGGAGGCAGATCACTCATAGTGGCTTATGGA
AAAGGAGCCAAAGACATGAAAGCAACAATCCTGGATTCTGGTAATCTTGTCCTGAGCAGC
ATGGCTAACCGATCAAGGTATATGTGGCAGAGTTTTGATTCTCCTACTGATACATGGCTT
CCAGAAATGAAGATTGGACTCAGGACAGCAAACCAATCTCTCATTTCATGGTGGAGCAAT
GATGACCCAGCAGTGGGGGACTACACCCTTGCAATGGACCCTTCTGGGTTGTCAAAACTC
ATTATCTGGTGGAAAGAGACTATATATTGGAGCAGTGCGCAATGGAACAGTAGTGAGTTG
TCTCTCATCCCACAATTATCATCTTTTACACCCATCTCAATTTTCTTCAGGTGTAGTAAT
TTTACCAATGACATCTCTTGCACATACTCTGCCAACCCATCTGATAGGATGACAAAGATT
TTGTTGAATCCAGCTGGATCGTTAAACATCATGCAGTTTGATTCTCTAGCACAGGTGTGG
ATTTTGGTATGGAGTGTACCAAGTACTTGTGAAGTTCATAACCTATGTGGAGCTTTTGGT
GTATGTAATAACAGTAGAGTGCTCAAGTGTGTGTGTACAAGAGGATTTGTGCCACGAGAC
TTAGCGGCATATTCTAGTGGAAATACCTGGAAGGGTTGTACCAGGAAGATCAAGCTGCAA
TGTAGCAGTGACGAGTTCCATGAGATTCCTAATGCGCGACTTCCTGATAATGGAAAGAAG
CTGACTGTTACAGGTCTTAGAGAGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8164#0      CAAACGCTGCCCCCTGCTGGGACCGGCTCGGCCATGGCTCGTCGGTGGCGGCGGCGGAGG 60
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      AGGAGAGGAGGAGGAGGAGGAGGTGGAGGAGAAATTGCAGATCGAAACCGGTGCACTGTG 120
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      CTTGCAACAAAAATTGTGGCTACAGAACTCTGTCAATGGAAGGAGTAGGGAGATGCTACA 180
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      ATAGAAATGATTTTTTTTCCTTTTTTTTTTCAGGGATACAACAGAAAGGAGTTGGTGGAA 240
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      GAGTGAAATTGGAATTTATTATTCTCCAATTATTTTCTGTGAATCTGTTCTCAAATGTAG 300
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      ACAACATATCGTGGGGCAGATAAACCGGTGGAAATTCTCTGTGCCACCAATGATACAAGT 360
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      ACTTGAGTTGATGGATAGTCACTTCCCAGTCAACACAGGAGAATTGGTTTGATGCTTTGA 420
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      TGTTGATGGTACCACCATGGAGAATGCAAGTAAGAAGAAAGGTATTTATGGGTTAATGGT 480
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      GCCACCACTGCGATCAGAAGAGTTCAAACAGTTAGTCACATGGTCAAAATTCAGCTATTG 540
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      GGCCAAAAGAACTACATCCATTCTTGACCTAGTCAATAAGCAGCACTTATTCAATCAATT 600
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      ATTGTCTTATTGTTGTTCAATGTCATGTCATAGATTAGTTTCCTTGGCATGTGTTGACCG 660
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      CAAGTCTGCAACGTAGACTTCACGGTAAAACACCATATGAAGTTCAAGCTGACAACTCTC 720
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      AATGTATTGTCCAGAGAAGTTTTGTTATTTGGAACTGCGGCGAAAGGAATTTCCACGCTT 780
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      TATTTCCAACCTGTCCTTCGGATGAATCTAGAGCTGATTGGTCTTTTCTGGGAGCCATGA 840
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      TGTGGAAAAGGAGCTCTTGCAGGGAAGTTATTACTTTGCTGATTATGTCTTTGTGGTTAG 900
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      AAAGATGTTTAGGAACAGACAGCATCTCTGCAAATGAAACACTTCCAGATGGGCAGACCA 960
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      TAGTGTCCATGAAAAATGTGTTTGTACTTGGTTTCTTTAGCCCTGGAGCTTCAAGTCATC 1020
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      GATATGTTGGTATATGGTACAGCAACCCAGTAAATAGAACAATCGTATGGGTTGCTAACA 1080
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      GGAACGAACCACTATTAGATGCTTCAGGAGTCCTTATGTTTGATGTTAATGGAAACCTGG 1140
consensus_8164#1      -----------------------------------------GATCTTAATGGAAACCTGG 19
                                                               *** ***************

consensus_8164#0      TCATTGCGCATGGAGGCAGATCACTCATAGTGGCTTATGGACAAGGAACCAAAGACATGA 1200
consensus_8164#1      TAATTGCACATGGAGGCAGATCACTCATAGTGGCTTATGGAAAAGGAGCCAAAGACATGA 79
                      * ***** ********************************* ***** ************

consensus_8164#0      AAGCCACAATCCTGGATTCTGGTAATCTTGCCCTGAGCAGCATGGCTAACCCATCAAGGT 1260
consensus_8164#1      AAGCAACAATCCTGGATTCTGGTAATCTTGTCCTGAGCAGCATGGCTAACCGATCAAGGT 139
                      **** ************************* ******************** ********

consensus_8164#0      ATATATGGCAGAGTTTTGATTCTCCTACTGATACATGGCTCCCTGAAATGAAGATTGGAC 1320
consensus_8164#1      ATATGTGGCAGAGTTTTGATTCTCCTACTGATACATGGCTTCCAGAAATGAAGATTGGAC 199
                      **** *********************************** ** ****************

consensus_8164#0      TCAGGACAACAAACCAAACACTCATTTCATGGTCGAGCATTGATGACCCAGCAATGGGGG 1380
consensus_8164#1      TCAGGACAGCAAACCAATCTCTCATTTCATGGTGGAGCAATGATGACCCAGCAGTGGGGG 259
                      ******** ******** * ************* ***** ************* ******

consensus_8164#0      ATTACAAACTTGGAATGGATCCTGCTGGGCTGTCACATCCTGCTGGGCTGTCACAATTCA 1440
consensus_8164#1      ACTACACCCTTGCAATGGACCCTTC------------------TGGGTTGTCAAAACTCA 301
                      * ****  **** ****** *** *                  **** ***** ** ***

consensus_8164#0      TTGTCTGGTGGAGAGGGAATAATTTTTGGACCAGTGGACACTGGAGTGGTGACATGTTTT 1500
consensus_8164#1      TTATCTGGTGGAAAGAGACTATATATTGGAGCAGTGCGCAATGGAACAGTAGTGAGTTGT 361
                      ** ********* ** ** **  * ***** *****  ** ****   **     *** *

consensus_8164#0      CTCTCATCCCAGAACTAAAATTTTTTACCACCATCCCCAATTTTCTTCAAATGTAACAAT 1560
consensus_8164#1      CTCTCATCCCACAATTATCATCTTTTACACCCATCTC-AATTTTCTTCAGGTGTAGTAAT 420
                      *********** ** **  ** ******  ***** * ***********  ****  ***

consensus_8164#0      TCTACCAATGACATCACTTGCACATACTCTGCTAACCCATCCGATAGGATGACAAAGATT 1620
consensus_8164#1      TTTACCAATGACATCTCTTGCACATACTCTGCCAACCCATCTGATAGGATGACAAAGATT 480
                      * ************* **************** ******** ******************

consensus_8164#0      GTTTTGAATTCAACTGGATCATTAAGCATCATGCAGTTTGATTCTCTTGAGAAATCATGG 1680
consensus_8164#1      TTGTTGAATCCAGCTGGATCGTTAAACATCATGCAGTTTGATTCTCTAGCACAGGTGTGG 540
                       * ****** ** ******* **** ********************* *   *    ***

consensus_8164#0      ATTTTGTTATGGAGACAGCCAAGTACTTGTGAAGTTCATAACCTATGTGGAGCTTTTGGT 1740
consensus_8164#1      ATTTTGGTATGGAGTGTACCAAGTACTTGTGAAGTTCATAACCTATGTGGAGCTTTTGGT 600
                      ****** *******    ******************************************

consensus_8164#0      ATATGCAATGACAATGATGCAGTGCCTAAGTGTTATTGTACAAAAGGATTTGTTCCACAG 1800
consensus_8164#1      GTATGTAATAACAGTAG---AGTGCTCAAGTGTGTGTGTACAAGAGGATTTGTGCCACGA 657
                       **** *** *** *     *****  ******   ******* ********* ****  

consensus_8164#0      GACATAATAGCATATACTAATGGGTATACCAGGGAGGGCTGCAACAGGCAGACCAAGCTG 1860
consensus_8164#1      GACTTAGCGGCATATTCTAGTGGAAATACCTGGAAGGGTTGTACCAGGAAGATCAAGCTG 717
                      *** **   ****** *** ***  ***** ** **** ** * **** *** *******

consensus_8164#0      CAATGTAGCAGTGACGAGTTCTTTGAGATTCCTAATGTACGGCTTCCTGATAATAGAAAG 1920
consensus_8164#1      CAATGTAGCAGTGACGAGTTCCATGAGATTCCTAATGCGCGACTTCCTGATAATGGAAAG 777
                      *********************  **************  ** ************ *****

consensus_8164#0      AAGCTGCCTGTTATGGGTCTTAGTGAGTGCAAACTGGCATGTTTGATGAACTGCTCTTGT 1980
consensus_8164#1      AAGCTGACTGTTACAGGTCTTAGAGAGT-------------------------------- 805
                      ****** ******  ******** ****                                

consensus_8164#0      ACAGCTTATGCTTATTTGCAGTTGGATGGATGCAGCTTGTGGTATGGTGATCTTATGAAC 2040
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      TTGCAGGATGGTTATGATGTTCATGGTGCAGGAACTCTATGCCTTCGTCTGGCAGCGTCA 2100
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      GAAGTAGAATCTGGAAGAAACTCAGGCTCGGGTCACAAAATGCTTTGGATGGCGTGTGTG 2160
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      ATTCCACCTGTTGTAGTTCTTTCCTTTTGCTCCCTTTCCTTTGTTCTTTGGAGAAGACGG 2220
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      AGTCAAAACAAAGGTAAAGAAAATTTACATGCTCACCACTCCTTGATGACTCTGGATACG 2280
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      GACAGTGCAGTCAAACTTTGGGAGAGTGAAGAAGCAGGTTCTCAGTTTGTGCTGTTTTCC 2340
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      TTCTCCCAAATAGCAAATTCCACCAACAACTTTTCAGCTCAAAACAAGCTTGGTGAGGGG 2400
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      GGGTTTGGTCCTGTGTACAAGGGAAACTTACCTGATAGGCAGGATATTGCTGTCAAGAGG 2460
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      CTTGCAACAAATTCGGGACAAGGGTTAGTTGAATTTAAGAATGAGGTCCTGCTGATAGCA 2520
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      AAACTTCAACACGTAAATTTGGTTAGGCTTTTAGGCTGCTGCATCCAAGGGGAAGAAAAG 2580
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      ATACTTATCTACGAGTACATGCCAAATAAAAGCTTGGATTTCTTCCTCTTTGAAAAATCA 2640
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      AGAAGTGTGGTATTGGACTGGAGAAAGCGAATACATATAATTGAAGGAATTGCTCATGGT 2700
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      CTTCTTTATCTTCACAAACATTCTAGACTGAGAATTATTCATAGGGACTTGAAAGCAAGC 2760
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      AACATTCTGTTAGACATTGATATGAACCCTAAGATCTCTGATTTTGGCTTGGCGAGAATA 2820
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      TTTGGCTCTAAAGAAACTCAAGCTAATACAAACAGGGTTGTTGGGACATATGGTTACATG 2880
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      GCTCCTGAGTATGCCATGCAAGGCATTTTCTCGGTTAAGTCTGATGTGTTTAGCTTTGGG 2940
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      GTGTTGCTTTTGGAGATCGTCAGCGGAATGAGAAATGCAGGATCCCACCGACGTGGGCGC 3000
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      TCTCTTAACCTCCTTGGTCATGCCTGGGAGTTATGGAGGGAAGGCAGATGGTTTGATCTC 3060
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      GTTGATCCATCAACACGTGATGCATATCCTGAGCATAGGGTACTGAGATGTGTTCATGTC 3120
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      GGCCTGATGTGCGTCCAAGAGAACGCTGTTGATCGTCCCACTATGAGCGATGTCATCTCA 3180
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      ATGCTTACTAGCGAAAGCATCACCTTACCTGATCCTAGGCAGCCTGCTTTCCTCTCCATT 3240
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      GTGCTTCCAGCCGAAATGGATGCCCATGATGGATCCTTTTCTCAAAATGCAATGACAATT 3300
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      ACTGATCTGGAGGGTAGATAATAATATCATGTCCACCTGTCCAGCATATGCTGTTCTTAA 3360
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      AGCTTGATCAAATCCATTTGGCATAATGTATTGTATGTTCTTACAGCTGGACATGCTTAT 3420
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      TGATTGACAGAGAAAAATCTGAAAAAAAAAAAGTTTCAAAAAAAAAAAAAAAAAAAAAAA 3480
consensus_8164#1      ------------------------------------------------------------
                                                                                  

consensus_8164#0      AAAAAAAAAAAAAAAAAAAAAAAAAAA 3507
consensus_8164#1      ---------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)