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Oryza sativa
cluster # 8168 cluster # 8168       Sequences # 5       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8168#0 length = 2586 sequences # 3  
 consensus_8168#1 length = 601 sequences # 1  
consensus_8168#2 length = 579 sequences # 1  
consensusID : consensus_8168#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2586
fasta sequence 
                              [GCGCGCACTCTCTCTCTCCCCCCTACTCCGCCGCGCTGGTGGCGCCGCCTCGACCCCAACTGCGGCGGCTGTCTCCACCCCCTCCGGTTGGCAGCGCCCGCGGCCACCGCCACTAACTACGCGCCTGCCGCCGCCGCCGCCAAGGCCTTTGACAGAATATGGGGCACAGCGACGGCGACCACGGTAGCGACCTCTCCGCCGACGATTCCCCGTGGAGCGAGGGGAGCTGGTCCGACGACGATGACGAGGGATCGCTATCCTTCGAGGACAGCGGCGAAGGCTCCGACGCCGAGTCCGACGAACCGGATGCCCCGGCGGTGGAGGAGAGCGACTCTTCTGAGGACGAGGTGGCGCCACGGAATACGATAGGAGATGTGCCGTTGGAATGGTACAAGAACGAGGAGCACATCGGCTATGACATCACTGGTAGTAAGATCAAGAAGCGGGATAGGGAGGGCCGAATTGAGGCCTACCTCAGGAATGCTGATGATGCTAAGAATTGGAGAAAGATCTATGACGAGTATAATGATGAAGAGGTGCAGATTACCAAGGAAGAGGCTAAGATAATTAGTAGATTGCTGAAGGGAAAGACTCCACACACAAATGTGGATCCATATCCAGATTATGTTGATTGGTTTGAATATGATGGTAAAGGCCATCCACTTTCTAGTGCTCCGGAGCCAAAGAGGCGATTTGTACCCTCGAGGTGGGAACAGAAGAAGGTTGTTAAACTTGTTAGAGCCATTCGTAAAGGATGGATAAAGTTTGATAAGCCAAAGGAGGAACCTAACTTTTATCTCTTGTGGGGAGATGAAACTGATACAGCAGACAATAAGCGGCAAGGCCTGAGCTACATTCCTGCACCCAAACCAAATTTGCCAGGTCATGAAGAGTCATATAATCCTTCTGTTGAATACATTCCAACACAAGAGGAGATAGATTCATATCAGCTTATGTATGAGGAGGACAGGCCAAAGTTTATTCCACGAAAATTTGATTGTCTTAGAAGTGTACCTGCATATGAGAAGGCACTTAGGGAAGGCTTTGATCGGTGTCTAGATCTTTATCTCTGCCCTAGAACACGCAAGAAGCGTATAAACATTGATCCTGAGTCACTCAAGCCAAAGTTACCCAGTAAAAAGGATTTGAGGCCATACCCAAGAACATGTTACCTTGAGTTCAAGGGGCATAATGGTCCAGTGAAGTCTCTTTCAGTTGAAGCAACTGGGCAATGGATAGCATCTGGTTCATCTGATGGAACAATTCGTGTTTGGGAGGTTGAAACTGGTCGCTGCATTAAGGTTTGGAATGTTGGTGGTGTTGTTCACCGTATTGCCTGGAATCCTTCACCTGATAGACACATTCTTGCTGCTGTTGTAGACCATGATCTGCTGCTTCTTAATGCTGAGGTTGGGGATGAAGACGCTCAAATGAAGACAAAAGGGCTCCTCCAAATCGAGGAACTGGCTCAGGAAGAGGATAATGGTGATAAGAAACCAGCTGTCAAGTGGGTCAAGCATGAAAAATTTGATGGAATCATGTTGATTCATCATAAGGCTGTGTCAACTGTAGAGTGGCATTTCAAGGGAGACTATTTCACCACAGTTGTGCCAAGTGGTGATTCAAGAGCTGTACTGTTGCATCAGCTCTCTAAGAAGCATTCGCATCATCCTTTCCGTAAATTGCCAGGCCTTCCTATTGCAGCAGTGTTTCATCCAAGTCAAAAGATGTTCTTTGTGGCCACTAAGAAATTTGTTCAGGTTTATGATCTCCAGAAGGCACAGTTAGTCAAGAAGTTGGAGTCAGGTGTTCGTGAGATTTCCTCCATCTCGATACATCCTGGTGGTGATAATGTTATCGTGGGCAGCAAAGATGGTAAATTGTGTTGGTTCGATACTGATCTATCCACGCGACCATACAAGACATTAAAGAACCACTCGAAGGATATCACTAATGTTACTTTTCACCGGAAATATCCTC--TTTTTGCCTCATCCTCAGAGGATTGT-ACGGCC-TATGTA-TTCCATGGAATGGTCTATTCAGATCTTAA-CCA-AAACCCACT-TATTGTACCATTGGAAA-TTCTTCGTGGTCATTCAAGTTCAGATGGAAGAGGAGTTCTGGAT-TGCAAATTCCACCCAAGACAGCCTTGG-TTGTTCACTGCTGGTGCTGACTCTGTCGTTAGGCTTTATTGCGACTAAAGGTGCTTTCGAAA-AAAAAAACAATAGATGGTTTTACAAGGCAATGCAATATGTCTGGTCTTT-CTACGGGCTCGTATACGATGATGGATGGTGTATCATGCCAAACACTTAACTGGAGCCAGGGCACGTGTTGAGCCATCTGTGCTGCCTAAATTTTGGTTCAAATTATTTGTACCCTATTGTTATTTTAGTTC-TGTAGTAACAGTGAGACATGCAGAGTGTTCCAGAATCGTGGCAAAGGTAGGTGTGTACTAGGATAAACAGATAAGGAACACCGAGCTAATCTATGCTATTCCAAAAGAGGTTTTGTGCTGTCACAAGCTTTTGTGGTCTCTGAAGCTGAACTGAACTAAAAAAGTAGTGATATTGGAAGCTTGAGCTCGACCCAACT]

[+] EMBL AK111603             [GCGCGCACTCTCTCTCTCCCCCCTACTCCGCCGCGCTGGTGGCGCCGCCTCGACCCCAACTGCGGCGGCTGTCTCCACCCCCTCCGGTTGGCAGCGCCCGCGGCCACCGCCACTAACTACGCGCCTGCCGCCGCCGCCGCCAAGGCCTTTGACAGAATATGGGGCACAGCGACGGCGACCACGGTAGCGACCTCTCCGCCGACGATTCCCCGTGGAGCGAGGGGAGCTGGTCCGACGACGATGACGAGGGATCGCTATCCTTCGAGGACAGCGGCGAAGGCTCCGACGCCGAGTCCGACGAACCGGATGCCCCGGCGGTGGAGGAGAGCGACTCTTCTGAGGACGAGGTGGCGCCACGGAATACGATAGGAGATGTGCCGTTGGAATGGTACAAGAACGAGGAGCACATCGGCTATGACATCACTGGTAGTAAGATCAAGAAGCGGGATAGGGAGGGCCGAATTGAGGCCTACCTCAGGAATGCTGATGATGCTAAGAATTGGAGAAAGATCTATGACGAGTATAATGATGAAGAGGTGCAGATTACCAAGGAAGAGGCTAAGATAATTAGTAGATTGCTGAAGGGAAAGACTCCACACACAAATGTGGATCCATATCCAGATTATGTTGATTGGTTTGAATATGATGGTAAAGGCCATCCACTTTCTAGTGCTCCGGAGCCAAAGAGGCGATTTGTACCCTCGAGGTGGGAACAGAAGAAGGTTGTTAAACTTGTTAGAGCCATTCGTAAAGGATGGATAAAGTTTGATAAGCCAAAGGAGGAACCTAACTTTTATCTCTTGTGGGGAGATGAAACTGATACAGCAGACAATAAGCGGCAAGGCCTGAGCTACATTCCTGCACCCAAACCAAATTTGCCAGGTCATGAAGAGTCATATAATCCTTCTGTTGAATACATTCCAACACAAGAGGAGATAGATTCATATCAGCTTATGTATGAGGAGGACAGGCCAAAGTTTATTCCACGAAAATTTGATTGTCTTAGAAGTGTACCTGCATATGAGAAGGCACTTAGGGAAGGCTTTGATCGGTGTCTAGATCTTTATCTCTGCCCTAGAACACGCAAGAAGCGTATAAACATTGATCCTGAGTCACTCAAGCCAAAGTTACCCAGTAAAAAGGATTTGAGGCCATACCCAAGAACATGTTACCTTGAGTTCAAGGGGCATAATGGTCCAGTGAAGTCTCTTTCAGTTGAAGCAACTGGGCAATGGATAGCATCTGGTTCATCTGATGGAACAATTCGTGTTTGGGAGGTTGAAACTGGTCGCTGCATTAAGGTTTGGAATGTTGGTGGTGTTGTTCACCGTATTGCCTGGAATCCTTCACCTGATAGACACATTCTTGCTGCTGTTGTAGACCATGATCTGCTGCTTCTTAATGCTGAGGTTGGGGATGAAGACGCTCAAATGAAGACAAAAGGGCTCCTCCAAATCGAGGAACTGGCTCAGGAAGAGGATAATGGTGATAAGAAACCAGCTGTCAAGTGGGTCAAGCATGAAAAATTTGATGGAATCATGTTGATTCATCATAAGGCTGTGTCAACTGTAGAGTGGCATTTCAAGGGAGACTATTTCACCACAGTTGTGCCAAGTGGTGATTCAAGAGCTGTACTGTTGCATCAGCTCTCTAAGAAGCATTCGCATCATCCTTTCCGTAAATTGCCAGGCCTTCCTATTGCAGCAGTGTTTCATCCAAGTCAAAAGATGTTCTTTGTGGCCACTAAGAAATTTGTTCAGGTTTATGATCTCCAGAAGGCACAGTTAGTCAAGAAGTTGGAGTCAGGTGTTCGTGAGATTTCCTCCATCTCGATACATCCTGGTGGTGATAATGTTATCGTGGGCAGCAAAGATGGTAAATTGTGTTGGTTCGATACTGATCTATCCACGCGACCATACAAGACATTAAAGAACCACTCGAAGGATATCACTAATGTTACTTTTCACCGGAAATATCCTC  TTTTTGCCTCATCCTCAGAGGATTGT ACGGCC TATGTA TTCCATGGAATGGTCTATTCAGATCTTAA CCA AAACCCACT TATTGTACCATTGGAAA TTCTTCGTGGTCATTCAAGTTCAGATGGAAGAGGAGTTCTGGAT TGCAAATTCCACCCAAGACAGCCTTGG TTGTTCACTGCTGGTGCTGACTCTGTCGTTAGGCTTTATTGCGACTAAAGGTGCTTTCGAAA AAAAAAACAATAGATGGTTTTACAAGGCAATGCAATATGTCTGGTCTTT CTACGGGCTCGTATACGATGATGGATGGTGTATCATGCCAAACACTTAACTGGAGCCAGGGCACGTGTTGAGCCATCTGTGCTGCCTAAATTTTGGTTCAAATTATTTGTACCCTATTGTTATTTTAGTTC TGTAGTAACAGTGAGACATGCAGAGTGTTCCAGAATCGTGGCAAAGGTAGGTGTGTACTAGGATAAACAGATAAGGAACACCGAGCTAATCTATGCTATTCCAAAAGAGGTTTTGTGCTGTCACAAGCTTTTGTGGTCTCTGAAGCTGAACTGAACTAAAAAAGTAGTGATATTGGAAGCTTG              ]
[+] EMBL BI805597             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               gGGGAGTATCCTCGGGTGTTGCCTCATCCTCAGAGGATTGTGACGTCCTTATGTAGTTCCATGGAATGGTCTATTCAGATCTTAAGCCACATACCCACTGTATTGTACCATTGGAAAGTTCTTCGTGGTCATTCAAGTTCAGATGGAAGAGGAGTTCTGGATGTGCAAATTCCACCCAAGACAGCCTTGGTTTGTTCACTGCTGGTGCTGACTCTGTCGTTAGGCTTTATTGCGACTAAAGGTGCTTTCGAAAGAAANAAACAATAGATGGTTTTACAAGGCAATGCAATATGTCTGGTCTTTGCTACGGGCTCGTATACGATGATGGATGGTGTATCATGCC AACACTTAACTGGAGCCAGGGCACGTGTTGAGCCATCTGTGCTGCCTAAATTTTGGTTCAAATTATTTGTACCCTATTGTTATGTTAGTTCTTGTAGTAACAGTGAGACATGCAGAGTGTTCCAGAATCGTGGCAAAGGTAGGTGTGTACTAGGATAAACAGATAAGGAACACCGAGCTAATCTATGCTATTCCAAAAGAGGTTTTGTGCTGTCA AAGaggagga                                                               ]
[+] EMBL AK112040             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCTTTATTGCGACTAAAGGTGCTTTCG AA AAAAAAACAATAGATGGTTTTACAAGGCAATGCAATATGTCTGGTCTTT CTACGGGCTCGTATACGATGATGGATGGTGTATCATGCCAAACACTTAACTGGAGCCAGGGCACGTGTTGAGCCATCTGTGCTGCCTAAATTTTGGTTCAAATTATTTGTACCCTATTGTTATTTTAGTTC TGTAGTAACAGTGAGACATGCAGAGTGTTCCAGAATCGTGGCAAAGGTAGGTGTGTACTAGGATAAACAGATAAGGAACACCGAGCTAATCTATGCTATTCCAAAAGAGGTTTTGTGCTGTCACAAGCTTTTGTGGTCTCTGAAGCTGAACTGAACTAAAAAAGTAGTGATATTGGAAGCTTGAGCTCGACCCAACT]




>consensus_8168#0
GCGCGCACTCTCTCTCTCCCCCCTACTCCGCCGCGCTGGTGGCGCCGCCTCGACCCCAAC
TGCGGCGGCTGTCTCCACCCCCTCCGGTTGGCAGCGCCCGCGGCCACCGCCACTAACTAC
GCGCCTGCCGCCGCCGCCGCCAAGGCCTTTGACAGAATATGGGGCACAGCGACGGCGACC
ACGGTAGCGACCTCTCCGCCGACGATTCCCCGTGGAGCGAGGGGAGCTGGTCCGACGACG
ATGACGAGGGATCGCTATCCTTCGAGGACAGCGGCGAAGGCTCCGACGCCGAGTCCGACG
AACCGGATGCCCCGGCGGTGGAGGAGAGCGACTCTTCTGAGGACGAGGTGGCGCCACGGA
ATACGATAGGAGATGTGCCGTTGGAATGGTACAAGAACGAGGAGCACATCGGCTATGACA
TCACTGGTAGTAAGATCAAGAAGCGGGATAGGGAGGGCCGAATTGAGGCCTACCTCAGGA
ATGCTGATGATGCTAAGAATTGGAGAAAGATCTATGACGAGTATAATGATGAAGAGGTGC
AGATTACCAAGGAAGAGGCTAAGATAATTAGTAGATTGCTGAAGGGAAAGACTCCACACA
CAAATGTGGATCCATATCCAGATTATGTTGATTGGTTTGAATATGATGGTAAAGGCCATC
CACTTTCTAGTGCTCCGGAGCCAAAGAGGCGATTTGTACCCTCGAGGTGGGAACAGAAGA
AGGTTGTTAAACTTGTTAGAGCCATTCGTAAAGGATGGATAAAGTTTGATAAGCCAAAGG
AGGAACCTAACTTTTATCTCTTGTGGGGAGATGAAACTGATACAGCAGACAATAAGCGGC
AAGGCCTGAGCTACATTCCTGCACCCAAACCAAATTTGCCAGGTCATGAAGAGTCATATA
ATCCTTCTGTTGAATACATTCCAACACAAGAGGAGATAGATTCATATCAGCTTATGTATG
AGGAGGACAGGCCAAAGTTTATTCCACGAAAATTTGATTGTCTTAGAAGTGTACCTGCAT
ATGAGAAGGCACTTAGGGAAGGCTTTGATCGGTGTCTAGATCTTTATCTCTGCCCTAGAA
CACGCAAGAAGCGTATAAACATTGATCCTGAGTCACTCAAGCCAAAGTTACCCAGTAAAA
AGGATTTGAGGCCATACCCAAGAACATGTTACCTTGAGTTCAAGGGGCATAATGGTCCAG
TGAAGTCTCTTTCAGTTGAAGCAACTGGGCAATGGATAGCATCTGGTTCATCTGATGGAA
CAATTCGTGTTTGGGAGGTTGAAACTGGTCGCTGCATTAAGGTTTGGAATGTTGGTGGTG
TTGTTCACCGTATTGCCTGGAATCCTTCACCTGATAGACACATTCTTGCTGCTGTTGTAG
ACCATGATCTGCTGCTTCTTAATGCTGAGGTTGGGGATGAAGACGCTCAAATGAAGACAA
AAGGGCTCCTCCAAATCGAGGAACTGGCTCAGGAAGAGGATAATGGTGATAAGAAACCAG
CTGTCAAGTGGGTCAAGCATGAAAAATTTGATGGAATCATGTTGATTCATCATAAGGCTG
TGTCAACTGTAGAGTGGCATTTCAAGGGAGACTATTTCACCACAGTTGTGCCAAGTGGTG
ATTCAAGAGCTGTACTGTTGCATCAGCTCTCTAAGAAGCATTCGCATCATCCTTTCCGTA
AATTGCCAGGCCTTCCTATTGCAGCAGTGTTTCATCCAAGTCAAAAGATGTTCTTTGTGG
CCACTAAGAAATTTGTTCAGGTTTATGATCTCCAGAAGGCACAGTTAGTCAAGAAGTTGG
AGTCAGGTGTTCGTGAGATTTCCTCCATCTCGATACATCCTGGTGGTGATAATGTTATCG
TGGGCAGCAAAGATGGTAAATTGTGTTGGTTCGATACTGATCTATCCACGCGACCATACA
AGACATTAAAGAACCACTCGAAGGATATCACTAATGTTACTTTTCACCGGAAATATCCTC
TTTTTGCCTCATCCTCAGAGGATTGTACGGCCTATGTATTCCATGGAATGGTCTATTCAG
ATCTTAACCAAAACCCACTTATTGTACCATTGGAAATTCTTCGTGGTCATTCAAGTTCAG
ATGGAAGAGGAGTTCTGGATTGCAAATTCCACCCAAGACAGCCTTGGTTGTTCACTGCTG
GTGCTGACTCTGTCGTTAGGCTTTATTGCGACTAAAGGTGCTTTCGAAAAAAAAAACAAT
AGATGGTTTTACAAGGCAATGCAATATGTCTGGTCTTTCTACGGGCTCGTATACGATGAT
GGATGGTGTATCATGCCAAACACTTAACTGGAGCCAGGGCACGTGTTGAGCCATCTGTGC
TGCCTAAATTTTGGTTCAAATTATTTGTACCCTATTGTTATTTTAGTTCTGTAGTAACAG
TGAGACATGCAGAGTGTTCCAGAATCGTGGCAAAGGTAGGTGTGTACTAGGATAAACAGA
TAAGGAACACCGAGCTAATCTATGCTATTCCAAAAGAGGTTTTGTGCTGTCACAAGCTTT
TGTGGTCTCTGAAGCTGAACTGAACTAAAAAAGTAGTGATATTGGAAGCTTGAGCTCGAC
CCAACT

consensusID : consensus_8168#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 601
fasta sequence 
                              [AGAGGATTGTACGGCCTATGTATTCCATGGAATGGTCTATTCAGATCTTAACCAAAACCCACTTATTGTACCATTGGAAATTCTTCGTGGTCATTCAAGTTCAGATGGAAGAGGAGTTCTGGATTGCAAATTCCACCCAAGACAGCCTTGGTTGTTCACTGCTGGTGCTGACTCTGTCGTTAGGCTTTATTGCGACTAAAGGTGCTTTCGAAAAAAAAAACAATAGATGGTTTTACAAGGCAATGCAATATGTCTGGTCTTTCTACGGGCTCGTATACGATGATGGATGGTGTATCATGCCAAACACTTAACTGGAGCCAGGGCACGTGTTGAGCCATCTGTGCTGCCTAAATTTTGGCTCAAATTATTTGCACCCTATGGTTATTTTAGTTCTGCAGGAACAGTGAGACATGCAGAGGGTTCCAAAATCCTGGTCAAAGGTAGGGGTGGTACTACGCAAAACAGATCAGGAACCCCGAGGTAATCTATGCTATTCCAAAAAGAGGTTTTGTGGTGTCCTAAAAAGAAACAAGGAGCAAACCACCCGCGCTCCATCTCTGATCCCCGACCGGCGCTCTGATGAAAACCCCGGGTTCCTGCG]

[+] EMBL CA755759             [AGAGGATTGTACGGCCTATGTATTCCATGGAATGGTCTATTCAGATCTTAACCAAAACCCACTTATTGTACCATTGGAAATTCTTCGTGGTCATTCAAGTTCAGATGGAAGAGGAGTTCTGGATTGCAAATTCCACCCAAGACAGCCTTGGTTGTTCACTGCTGGTGCTGACTCTGTCGTTAGGCTTTATTGCGACTAAAGGTGCTTTCGAAAAAAAAAACAATAGATGGTTTTACAAGGCAATGCAATATGTCTGGTCTTTCTACGGGCTCGTATACGATGATGGATGGTGTATCATGCCAAACACTTAACTGGAGCCAGGGCACGTGTTGAGCCATCTGTGCTGCCTAAATTTTGGCTCAAATTATTTGCACCCTATGGTTATTTTAGTTCTGCAGGAACAGTGAGACATGCAGAGGGTTCCAAAATCCTGGTCAAAGGTAGGGGTGGTACTACGCAAAACAGATCAGGAACCCCGAGGTAATCTATGCTATTCCAAAAAGAGGTTTTGTGGTGTCCTAAAAAGAAACAAGGAGCAAACCACCCGCGCTCCATCTCTGATCCCCGACCGGCGCTCTGATGAAAACCCCGGGTTCCTGCG]




>consensus_8168#1
AGAGGATTGTACGGCCTATGTATTCCATGGAATGGTCTATTCAGATCTTAACCAAAACCC
ACTTATTGTACCATTGGAAATTCTTCGTGGTCATTCAAGTTCAGATGGAAGAGGAGTTCT
GGATTGCAAATTCCACCCAAGACAGCCTTGGTTGTTCACTGCTGGTGCTGACTCTGTCGT
TAGGCTTTATTGCGACTAAAGGTGCTTTCGAAAAAAAAAACAATAGATGGTTTTACAAGG
CAATGCAATATGTCTGGTCTTTCTACGGGCTCGTATACGATGATGGATGGTGTATCATGC
CAAACACTTAACTGGAGCCAGGGCACGTGTTGAGCCATCTGTGCTGCCTAAATTTTGGCT
CAAATTATTTGCACCCTATGGTTATTTTAGTTCTGCAGGAACAGTGAGACATGCAGAGGG
TTCCAAAATCCTGGTCAAAGGTAGGGGTGGTACTACGCAAAACAGATCAGGAACCCCGAG
GTAATCTATGCTATTCCAAAAAGAGGTTTTGTGGTGTCCTAAAAAGAAACAAGGAGCAAA
CCACCCGCGCTCCATCTCTGATCCCCGACCGGCGCTCTGATGAAAACCCCGGGTTCCTGC
G

consensusID : consensus_8168#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 579
fasta sequence 
                              [TTGTTGCCCTACATCCCATAAAAGGATTTTTTCCCGCCCCATGGTTTTTTCCCGGGGAATGTGTTTTTTTCAGATTCTTACCCCAAAACCCCCCCTATTTGGATCCCATGGGGAATTTCTTTGGGGGGCCTTTCAAATTTTAGATGGAAGAGGGATTTCTGGGATTGCAAATTTCCACCCAAGACAGCCCTGGGTTGTTCCCTGCTGGTGCTGACTCCGTCGTTGGGCTTTATTGCGACTAAAGGTGCTTTCGAAAAAAAAAAACCATAGATGGTTTTACAAGGCAATGCAATATGTTTGGTCTTTTTACGGGCTTGTATACGATGATGGATGGTGTATCATGCCTAACCCTTAACTGGAGCCAGGGCACGTAGTGAGCCATCTGTGCTGCCTAAATTTTGGTTCAAATTATTTGTACCCTATTGTTATTTTAGTTCCGTAGTAACAGTGAGACATGCAGAGTGTTCCAGAATCGTGGCAAAGGTAGTTGTGTTCTAGGATAAACAGATAAGGAACCCCGAGCTAATCTTTGCTATTCCAAAAGAGGTTTTGTGCTGTCAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA760929             [TTGTTGCCCTACATCCCATAAAAGGATTTTTTCCCGCCCCATGGTTTTTTCCCGGGGAATGTGTTTTTTTCAGATTCTTACCCCAAAACCCCCCCTATTTGGATCCCATGGGGAATTTCTTTGGGGGGCCTTTCAAATTTTAGATGGAAGAGGGATTTCTGGGATTGCAAATTTCCACCCAAGACAGCCCTGGGTTGTTCCCTGCTGGTGCTGACTCCGTCGTTGGGCTTTATTGCGACTAAAGGTGCTTTCGAAAAAAAAAAACCATAGATGGTTTTACAAGGCAATGCAATATGTTTGGTCTTTTTACGGGCTTGTATACGATGATGGATGGTGTATCATGCCTAACCCTTAACTGGAGCCAGGGCACGTAGTGAGCCATCTGTGCTGCCTAAATTTTGGTTCAAATTATTTGTACCCTATTGTTATTTTAGTTCCGTAGTAACAGTGAGACATGCAGAGTGTTCCAGAATCGTGGCAAAGGTAGTTGTGTTCTAGGATAAACAGATAAGGAACCCCGAGCTAATCTTTGCTATTCCAAAAGAGGTTTTGTGCTGTCAAAAAAAAAAAAAAAAAAAA]




>consensus_8168#2
TTGTTGCCCTACATCCCATAAAAGGATTTTTTCCCGCCCCATGGTTTTTTCCCGGGGAAT
GTGTTTTTTTCAGATTCTTACCCCAAAACCCCCCCTATTTGGATCCCATGGGGAATTTCT
TTGGGGGGCCTTTCAAATTTTAGATGGAAGAGGGATTTCTGGGATTGCAAATTTCCACCC
AAGACAGCCCTGGGTTGTTCCCTGCTGGTGCTGACTCCGTCGTTGGGCTTTATTGCGACT
AAAGGTGCTTTCGAAAAAAAAAAACCATAGATGGTTTTACAAGGCAATGCAATATGTTTG
GTCTTTTTACGGGCTTGTATACGATGATGGATGGTGTATCATGCCTAACCCTTAACTGGA
GCCAGGGCACGTAGTGAGCCATCTGTGCTGCCTAAATTTTGGTTCAAATTATTTGTACCC
TATTGTTATTTTAGTTCCGTAGTAACAGTGAGACATGCAGAGTGTTCCAGAATCGTGGCA
AAGGTAGTTGTGTTCTAGGATAAACAGATAAGGAACCCCGAGCTAATCTTTGCTATTCCA
AAAGAGGTTTTGTGCTGTCAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8168#0      GCGCGCACTCTCTCTCTCCCCCCTACTCCGCCGCGCTGGTGGCGCCGCCTCGACCCCAAC 60
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      TGCGGCGGCTGTCTCCACCCCCTCCGGTTGGCAGCGCCCGCGGCCACCGCCACTAACTAC 120
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      GCGCCTGCCGCCGCCGCCGCCAAGGCCTTTGACAGAATATGGGGCACAGCGACGGCGACC 180
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      ACGGTAGCGACCTCTCCGCCGACGATTCCCCGTGGAGCGAGGGGAGCTGGTCCGACGACG 240
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      ATGACGAGGGATCGCTATCCTTCGAGGACAGCGGCGAAGGCTCCGACGCCGAGTCCGACG 300
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      AACCGGATGCCCCGGCGGTGGAGGAGAGCGACTCTTCTGAGGACGAGGTGGCGCCACGGA 360
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      ATACGATAGGAGATGTGCCGTTGGAATGGTACAAGAACGAGGAGCACATCGGCTATGACA 420
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      TCACTGGTAGTAAGATCAAGAAGCGGGATAGGGAGGGCCGAATTGAGGCCTACCTCAGGA 480
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      ATGCTGATGATGCTAAGAATTGGAGAAAGATCTATGACGAGTATAATGATGAAGAGGTGC 540
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      AGATTACCAAGGAAGAGGCTAAGATAATTAGTAGATTGCTGAAGGGAAAGACTCCACACA 600
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      CAAATGTGGATCCATATCCAGATTATGTTGATTGGTTTGAATATGATGGTAAAGGCCATC 660
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      CACTTTCTAGTGCTCCGGAGCCAAAGAGGCGATTTGTACCCTCGAGGTGGGAACAGAAGA 720
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      AGGTTGTTAAACTTGTTAGAGCCATTCGTAAAGGATGGATAAAGTTTGATAAGCCAAAGG 780
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      AGGAACCTAACTTTTATCTCTTGTGGGGAGATGAAACTGATACAGCAGACAATAAGCGGC 840
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      AAGGCCTGAGCTACATTCCTGCACCCAAACCAAATTTGCCAGGTCATGAAGAGTCATATA 900
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      ATCCTTCTGTTGAATACATTCCAACACAAGAGGAGATAGATTCATATCAGCTTATGTATG 960
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      AGGAGGACAGGCCAAAGTTTATTCCACGAAAATTTGATTGTCTTAGAAGTGTACCTGCAT 1020
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      ATGAGAAGGCACTTAGGGAAGGCTTTGATCGGTGTCTAGATCTTTATCTCTGCCCTAGAA 1080
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      CACGCAAGAAGCGTATAAACATTGATCCTGAGTCACTCAAGCCAAAGTTACCCAGTAAAA 1140
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      AGGATTTGAGGCCATACCCAAGAACATGTTACCTTGAGTTCAAGGGGCATAATGGTCCAG 1200
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      TGAAGTCTCTTTCAGTTGAAGCAACTGGGCAATGGATAGCATCTGGTTCATCTGATGGAA 1260
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      CAATTCGTGTTTGGGAGGTTGAAACTGGTCGCTGCATTAAGGTTTGGAATGTTGGTGGTG 1320
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      TTGTTCACCGTATTGCCTGGAATCCTTCACCTGATAGACACATTCTTGCTGCTGTTGTAG 1380
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      ACCATGATCTGCTGCTTCTTAATGCTGAGGTTGGGGATGAAGACGCTCAAATGAAGACAA 1440
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      AAGGGCTCCTCCAAATCGAGGAACTGGCTCAGGAAGAGGATAATGGTGATAAGAAACCAG 1500
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      CTGTCAAGTGGGTCAAGCATGAAAAATTTGATGGAATCATGTTGATTCATCATAAGGCTG 1560
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      TGTCAACTGTAGAGTGGCATTTCAAGGGAGACTATTTCACCACAGTTGTGCCAAGTGGTG 1620
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      ATTCAAGAGCTGTACTGTTGCATCAGCTCTCTAAGAAGCATTCGCATCATCCTTTCCGTA 1680
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      AATTGCCAGGCCTTCCTATTGCAGCAGTGTTTCATCCAAGTCAAAAGATGTTCTTTGTGG 1740
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      CCACTAAGAAATTTGTTCAGGTTTATGATCTCCAGAAGGCACAGTTAGTCAAGAAGTTGG 1800
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      AGTCAGGTGTTCGTGAGATTTCCTCCATCTCGATACATCCTGGTGGTGATAATGTTATCG 1860
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      TGGGCAGCAAAGATGGTAAATTGTGTTGGTTCGATACTGATCTATCCACGCGACCATACA 1920
consensus_8168#2      ------------------------------------------------------------
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      AGACATTAAAGAACCACTCGAAGGATATCACTAATGTTACTTTTCACCGGAAATATCCTC 1980
consensus_8168#2      ---------------------------------TTGTTGCCCTACATCCCATAAAAGGAT 27
consensus_8168#1      ------------------------------------------------------------
                                                                                  

consensus_8168#0      TTTTTGCCTCATCCTCAGAGGATTGTACGGCCTATGTATTCCATGGAATGGTCTATTCAG 2040
consensus_8168#2      TTTTT--CCCGCCCCATGGTTTTTTCCCGGGGAATGTGTTTTTTTCAG------ATTCTT 79
consensus_8168#1      ----------------AGAGGATTGTACGGCCTATGTATTCCATGGAATGGTCTATTCAG 44
                                       *    **   ***   **** **   *  *       ****  

consensus_8168#0      ATCTTAACCAAAACCCACTTATT---GTACCATTGGAAATTCTTC---GTGGTCATTCAA 2094
consensus_8168#2      ACCCCA---AAACCCCCCCTATTTGGATCCCATGGGGAATTTCTTTGGGGGGCCTTTCAA 136
consensus_8168#1      ATCTTAACCAAAACCCACTTATT---GTACCATTGGAAATTCTTC---GTGGTCATTCAA 98
                      * *  *   *** *** * ****    * **** ** ****  *    * ** * *****

consensus_8168#0      GTTC-AGATGGAAGAGGAGTTCT--GGATTGCAAATT-CCACCCAAGACAGCCTTGG-TT 2149
consensus_8168#2      ATTTTAGATGGAAGAGGGATTTCTGGGATTGCAAATTTCCACCCAAGACAGCCCTGGGTT 196
consensus_8168#1      GTTC-AGATGGAAGAGGAGTTCT--GGATTGCAAATT-CCACCCAAGACAGCCTTGG-TT 153
                       **  ************  **    ************ *************** *** **

consensus_8168#0      GTTCACTGCTGGTGCTGACTCTGTCGTTAGGCTTTATTGCGACTAAAGGTGCTTTCGAAA 2209
consensus_8168#2      GTTCCCTGCTGGTGCTGACTCCGTCGTTGGGCTTTATTGCGACTAAAGGTGCTTTCGAAA 256
consensus_8168#1      GTTCACTGCTGGTGCTGACTCTGTCGTTAGGCTTTATTGCGACTAAAGGTGCTTTCGAAA 213
                      **** **************** ****** *******************************

consensus_8168#0      AAAAAAA-CAATAGATGGTTTTACAAGGCAATGCAATATGTCTGGTCTTTCTACGGGCTC 2268
consensus_8168#2      AAAAAAAACCATAGATGGTTTTACAAGGCAATGCAATATGTTTGGTCTTTTTACGGGCTT 316
consensus_8168#1      AAAAAAA-CAATAGATGGTTTTACAAGGCAATGCAATATGTCTGGTCTTTCTACGGGCTC 272
                      ******* * ******************************* ******** ******** 

consensus_8168#0      GTATACGATGATGGATGGTGTATCATGCCAAACACTTAACTGGAGCCAGGGCACGTGTTG 2328
consensus_8168#2      GTATACGATGATGGATGGTGTATCATGCCTAACCCTTAACTGGAGCCAGGGCACGTAGTG 376
consensus_8168#1      GTATACGATGATGGATGGTGTATCATGCCAAACACTTAACTGGAGCCAGGGCACGTGTTG 332
                      ***************************** *** **********************  **

consensus_8168#0      AGCCATCTGTGCTGCCTAAATTTTGGTTCAAATTATTTGTACCCTATTGTTATTTTAGTT 2388
consensus_8168#2      AGCCATCTGTGCTGCCTAAATTTTGGTTCAAATTATTTGTACCCTATTGTTATTTTAGTT 436
consensus_8168#1      AGCCATCTGTGCTGCCTAAATTTTGGCTCAAATTATTTGCACCCTATGGTTATTTTAGTT 392
                      ************************** ************ ******* ************

consensus_8168#0      CTGTAGTAACAGTGAGACATGCAGAGTGTTCCAGAATCGTGG-CAAAGGTAGGTGTG-TA 2446
consensus_8168#2      CCGTAGTAACAGTGAGACATGCAGAGTGTTCCAGAATCGTGG-CAAAGGTAGTTGTG-TT 494
consensus_8168#1      CTGCAGGAACAGTGAGACATGCAGAGGGTTCCAAAATCCTGGTCAAAGGTAGGGGTGGTA 452
                      * * ** ******************* ****** **** *** *********  *** * 

consensus_8168#0      CTAGGATAAACAGATAAGGAACACCGAGCTAATCTATGCTATTCCAAAA-GAGGTTTTGT 2505
consensus_8168#2      CTAGGATAAACAGATAAGGAACCCCGAGCTAATCTTTGCTATTCCAAAA-GAGGTTTTGT 553
consensus_8168#1      CTACGCAAAACAGATCAGGAACCCCGAGGTAATCTATGCTATTCCAAAAAGAGGTTTTGT 512
                      *** *  ******** ****** ***** ****** ************* **********

consensus_8168#0      GCTGTCACAAGCTTTTGTGGTCTCTGAAGCTGAACTGAACTAAAAAAGTAGTGATATTGG 2565
consensus_8168#2      GCTGTCAAAAAAAAAAAAAAAAAAAA---------------------------------- 579
consensus_8168#1      GGTGTCCTAAAAAGAAACAAGGAGCAAACCACCCGCGCTCCATCTCTGATCCCCGACCGG 572
                      * ****  **                                                  

consensus_8168#0      AAGCTTGAGCTCGACCCAACT-------- 2586
consensus_8168#2      -----------------------------
consensus_8168#1      CGCTCTGATGAAAACCCCGGGTTCCTGCG 601


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)