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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8169#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3164 fasta sequence
[ATAAAGAGGCTTTTTGCTCGCACCGCGCCGTCCTTGTCACGGGCCGCGCTCACCAGCTCACACACACACACTCGCAACCACCGCGCTCGCCGCGCGCGCTCTCGGCGCGCCACGGCCTATATAAAGTGGCAGTGGCGAGGAGCAAGGGGAGCAACGACCATGGCCATGGCGGCGAGGGGAGTGTTGGCCATGGTGGTGGCGGTGGCGGTGGTGTGGTGCAATAATGTGGCGAGGGCGCAGACGCCGGTGTTCGCGTGCGACGCGTCGAACGCGACGGTGTCCGGGTACGGGTTCTGCGACCGGACGAAGAGCAGCGCGGCGCGGGCGGCGGACCTGCTGGGGAGGCTGACGCTGGCGGAGAAGGTGGGGTTCCTGGTGAACAAGCAGGCGGCGCTGCCGCGGCTGGGGATCCCGGCGTACGAGTGGTGGTCGGAGGCGCTGCACGGCGTCTCCTACGTCGGCCCCGGCACCCGCTTCTCGACGCTCGTCCCCGGCGCCACCAGCTTCCCGCAGCCCATCCTCACCGCCGCCTCCTTCAACGCCTCCCTCTTCCGCGCCATTGGCGAGGTGGTGTCGACGGAGGCGA-GGGCGATGCACAACGTCGGGCTGGCCGGGCTCACGTTCTGGAGCCCCAACATCAACATCTTCCGCGACCCGCGGTGGGGACGCGGCCAGGAGACGCCCGGCGAGGACCCGCTGCTCGCCAGCAAGTACGCCGTCGGCTACGTCACCGGCCTCCAGGACGCCGGCGGCGGCAGCGACGCGCTCAAGGTCGCCGCCTGCTGCAAGCACTACACCGCATACGACGTCGACAACTGGAAGGGCGTCGAGCGCTACACCTTCGACGCCGTGGTGTCCCAGCAGGATCTGGACGACACGTTCCAGCCCCCGTTCAAGAGCTGCGTGATCGACGGCAATGTGGCCAGTGTTATGTGCTCCTACAACAAGGTCAATGGGAAGCCTACCTGTGCAGACAAGGACCTCTTGTCAGGAGTCATCAGAGGGGACTGGAAGCTGAACGGATACATTGTGTCGGATTGCGATTCGGTTGACGTACTGTACAATAACCAACACTACACCAAGAACCCTGAAGACGCAGCTGCCATCACAATCAAATCAGGTTTGGACCTGAACTGCGGCAACTTCCTGGCGCAGCACACCGTGGCGGCGGTGCAGGCCGGGAAGCTGTCGGAGTCCGACGTCGACCGGGCCATCACCAACAACTTCATCGTGCTCATGCGACTCGGCTTCTTCGACGGCGACCCGAGGAAGCTCCCCTTCGGCAGCCTCGGCCCCAAGGACGTGTGCACGTCGTCGAACCAGGAGCTGGCCCGCGAGGCCGCGCGCCAGGGCATCGTCCTCCTCAAGAACACCGGCGCGCTGCCGCTCTCCGCCAAGTCCATCAAGTCCATGGCCGTCATTGGCCCCAACGCCAATGCCAGCTTCACCATGATCGGCAACTACGAAGGTACGCCGTGCAAGTACACGACGCCGCTCCAGGGCCTCGGCGCCAACGTCGCCACCGTGTACCAGCCGGGATGCACCAACGTCGGGTGCAGCGGGAACAGCCTCCAGCTCAGCGCCGCCACGCAGGCCGCGGCGAGCGCTGACGTGACCGTGCTGGTGGTCGGCGCCGACCAGTCCGTGGAGCGCGAGAGCCTGGACAGGACGAGCCTCCTCCTGCCAGGACAGCAGCCGCAGCTCGTCTCGGCTGTCGCCAACGCCTCCAGGGGCCCCGTCATCCTCGTCGTCATGTCCGGCGGGCCGTTCGACATCTCCTTCGCCAAGTCCAGCGACAAGATCTCCGCCATTCTTTGGGTCGGCTACCCCGGCGAAGCCGGTGGCGCCGCCCTCGCCGACATCCTCTTCGGATACCACAATCCTGGTGGAAGGTTGCCGGTGACGTGGTACCCGGCGTCGTTCGCCGACAAGGTCTCGATGACCGACATGCGCATGCGGCCGGACTCGTCGACCGGCTACCCCGGCCGGACATACCGGTTCTACACCGGCGACACGGTGTACGCCTTCGGCGACGGCCTGAGCTACACCAAATTCGCGCACAGCCTCGTGTCGGCGCCGGAGCAGGTGGCCGTGCAGCTGGCCGAGGGCCACGCCTGCCACACCGAGCACTGCTTCTCGGTGGAGGCCGCCGGCGAGCACTGCGGGAGCCTGTCCTTCGACGTCCACCTCCGCGTGCGGAACGCCGGCGGGATGGCCGGCGGGCACACCGTGTTCCTCTTCTCGTCGCCGCCGTCGGTGCACAGCGCGCCGGCGAAGCACCTGCTCGGGTTCGAGAAGGTGTCGCTGGAGCCCGGCCAGGCCGGCGTGGTGGCGTTCAAGGTGGACGTGTGCAAGGACCTGAGCGTCGTCGACGAGCTCGGCAACCGGAAGGTGGCGCTGGGCAGCCACACGCTGCACGTCGGCGACCTCAAGCACACGCTCAACCTGAGGGTTTAAATTGATTAGGAGTTGGAATTAAACGGGAGATTTGCTAGTGAGGAAGGGCCTCTGATCTGATTGATACACGGAGTTTGGAATTGGATTCGTCAAGGGAATTTGCATTACGAGTGGCCGTCAGAAATCAGAATTGGTTAATGGGGGGTGTAATAAGGACGGACTCCCCCGTTGGAGAGAATTGGATCCTC-GGGGGTGGGTCTTTTGCT-GTGGGTGTTAACATTTGATTTATTTGGAGGGTCGATTTGCAACTGTAATCTTTGGAAAAAGAAATTTCCGCAAGTGTAATTGATT-GGAAGGGAAATTAGCTCATTTTCGTCCATTCAATTCAATTCAAAATTTCAAATCGTTGCTCTCAAAAAANAAAAAANAANNNNAANNAAAAAAAAAAAAAAAAAAAAAACCTCAACCTTGGGGGGGGGGCCCCGGGACCCAAATTCCCCTTTTAGTGGAGTGGTATAACCCGCCCCTCCTGGCCCGGGTTTTAAAACCGCGGGGACTTGGAAAAACCTGCGGGTCCCCAACTTTATTGGTTGGAAAACATTCCCCTTTTTCCCAGTTGGGGTATAACCAAAAAGGCCCCCACCTATCCCCCTTCCCAACTTGGCCCCCCCTTAATGGCGAATGGGGACCCCCCCTTTACCGGGCCATTAACCGGGGGGGGGGGGGGGGTTTCCCCAAGTGGCCGGTAATTTGCCACGGCCCTACGC]
[+] EMBL AK101782 [ATAAAGAGGCTTTTTGCTCGCACCGCGCCGTCCTTGTCACGGGCCGCGCTCACCAGCTCACACACACACACTCGCAACCACCGCGCTCGCCGCGCGCGCTCTCGGCGCGCCACGGCCTATATAAAGTGGCAGTGGCGAGGAGCAAGGGGAGCAACGACCATGGCCATGGCGGCGAGGGGAGTGTTGGCCATGGTGGTGGCGGTGGCGGTGGTGTGGTGCAATAATGTGGCGAGGGCGCAGACGCCGGTGTTCGCGTGCGACGCGTCGAACGCGACGGTGTCCGGGTACGGGTTCTGCGACCGGACGAAGAGCAGCGCGGCGCGGGCGGCGGACCTGCTGGGGAGGCTGACGCTGGCGGAGAAGGTGGGGTTCCTGGTGAACAAGCAGGCGGCGCTGCCGCGGCTGGGGATCCCGGCGTACGAGTGGTGGTCGGAGGCGCTGCACGGCGTCTCCTACGTCGGCCCCGGCACCCGCTTCTCGACGCTCGTCCCCGGCGCCACCAGCTTCCCGCAGCCCATCCTCACCGCCGCCTCCTTCAACGCCTCCCTCTTCCGCGCCATTGGCGAGGTGGTGTCGACGGAGGCGAGGGGCGATGCACAACGTCGGGCTGGCGGGGCTCACGTTCTGGAGCCCCAACATCAACATCTTCCGCGACCCGCGGTGGGGACGCGGCCAGGAGACGCCCGGCGAGGACCCGCTGCTCGCCAGCAAGTACGCCGTCGGCTACGTCACCGGCCTCCAGGACGCCGGCGGCGGCAGCGACGCGCTCAAGGTCGCCGCCTGCTGCAAGCACTACACCGCATACGACGTCGACAACTGGAAGGGCGTCGAGCGCTACACCTTCGACGCCGTGGTGTCCCAGCAGGATCTGGACGACACGTTCCAGCCCCCGTTCAAGAGCTGCGTGATCGACGGCAATGTGGCCAGTGTTATGTGCTCCTACAACAAGGTCAATGGGAAGCCTACCTGTGCAGACAAGGACCTCTTGTCAGGAGTCATCAGAGGGGACTGGAAGCTGAACGGATACATTGTGTCGGATTGCGATTCGGTTGACGTACTGTACAATAACCAACACTACACCAAGAACCCTGAAGACGCAGCTGCCATCACAATCAAATCAGGTTTGGACCTGAACTGCGGCAACTTCCTGGCGCAGCACACCGTGGCGGCGGTGCAGGCCGGGAAGCTGTCGGAGTCCGACGTCGACCGGGCCATCACCAACAACTTCATCGTGCTCATGCGACTCGGCTTCTTCGACGGCGACCCGAGGAAGCTCCCCTTCGGCAGCCTCGGCCCCAAGGACGTGTGCACGTCGTCGAACCAGGAGCTGGCCCGCGAGGCCGCGCGCCAGGGCATCGTCCTCCTCAAGAACACCGGCGCGCTGCCGCTCTCCGCCAAGTCCATCAAGTCCATGGCCGTCATTGGCCCCAACGCCAATGCCAGCTTCACCATGATCGGCAACTACGAAGGTACGCCGTGCAAGTACACGACGCCGCTCCAGGGCCTCGGCGCCAACGTCGCCACCGTGTACCAGCCGGGATGCACCAACGTCGGGTGCAGCGGGAACAGCCTCCAGCTCAGCGCCGCCACGCAGGCCGCGGCGAGCGCTGACGTGACCGTGCTGGTGGTCGGCGCCGACCAGTCCGTGGAGCGCGAGAGCCTGGACAGGACGAGCCTCCTCCTGCCAGGACAGCAGCCGCAGCTCGTCTCGGCTGTCGCCAACGCCTCCAGGGGCCCCGTCATCCTCGTCGTCATGTCCGGCGGGCCGTTCGACATCTCCTTCGCCAAGTCCAGCGACAAGATCTCCGCCATTCTTTGGGTCGGCTACCCCGGCGAAGCCGGTGGCGCCGCCCTCGCCGACATCCTCTTCGGATACCACAATCCTGGTGGAAGGTTGCCGGTGACGTGGTACCCGGCGTCGTTCGCCGACAAGGTCTCGATGACCGACATGCGCATGCGGCCGGACTCGTCGACCGGCTACCCCGGCCGGACATACCGGTTCTACACCGGCGACACGGTGTACGCCTTCGGCGACGGCCTGAGCTACACCAAATTCGCGCACAGCCTCGTGTCGGCGCCGGAGCAGGTGGCCGTGCAGCTGGCCGAGGGCCACGCCTGCCACACCGAGCACTGCTTCTCGGTGGAGGCCGCCGGCGAGCACTGCGGGAGCCTGTCCTTCGACGTCCACCTCCGCGTGCGGAACGCCGGCGGGATGGCCGGCGGGCACACCGTGTTCCTCTTCTCGTCGCCGCCGTCGGTGCACAGCGCGCCGGCGAAGCACCTGCTCGGGTTCGAGAAGGTGTCGCTGGAGCCCGGCCAGGCCGGCGTGGTGGCGTTCAAGGTGGACGTGTGCAAGGACCTGAGCGTCGTCGACGAGCTCGGCAACCGGAAGGTGGCGCTGGGCAGCCACACGCTGCACGTCGGCGACCTCAAGCACACGCTCAACCTGAGGGTTTAAATTGATTAGGAGTTGGAATTAAACGGGAGATTTGCTAGTGAGGAAGGGCCTCTGATCTGATTGATACACGGAGTTTGGAATTGGATTCGTCAAGGGAATTTGCATTACGAGTGGCCGTCAGAAATCAGAATTGGTTAATGGGGGGTGTAATAAGGACGGACTCCCCCGTTGGAGAGAATTGGATCCTC GGGGGTGGGTCTTTTGCT GTGGGTGTTAACATTTGATTTATTTGGAGGGTCGATTTGCAACTGTAATCTTTGGAAAAAGAAATTTCCGCAAGTGTAATTGATT GGAAGGGAAATTAGCTCATTTTCGTCCATTCAATTCAATTCAAAATTTCAAAT ]
[+] EMBL CB638412 [ TGGCGGTGGCGGTGGTGTGGTGCAATAATGTGGCGAGGGCGCAGACGCCGGTGTTCGCGTGCGACGCGTCGAACGCGACGGTGTCCGGGTACGGGTTCTGCGACCGGACGAAGAGCAGCGCGGCGCGGGCGGCGGACCTGCTGGGGAGGCTGACGCTGGCGGAGAAGGTGGGGTTCCTGGTGAACAAGCAGGCGGCGCTGCCGCGGCTGGGGATCCCGGCGTACGAGTGGTGGTCGGAGGCGCTGCACGGCGTCTCCTACGTCGGCCCCGGCACCCGCTTCTCGACGCTCGTCCCCGGCGCCACCAGCTTCCCGCAGCCCATCCTCACCGCCGCCTCCTTCAACGCCTCCCTCTTCCGCGCCATTGGCGAGGTGGTGTCGACGGAGGCGA GGGCGATGCACAACGTCGGGCTGGCCGGGCTCACGTTCTGGAGCCCCAACATCAACATCTTCCGCGACCCGCGGTGGGGACGCGGCCAGGAGACGCCCGGCGAGGACCCGCTGCTCGCCAGCAAGTACGCCGTCGGCTACGTCACCGGCCTCCAGGACGCCGGCGGCGGCAGCGACGCGCTCAAAGTCGCCGC ]
[+] EMBL CB638464 [ TGGCGGTGGCGGTGGTGTGGTGCAATAATGTGGCGAGGGCGCAGACGCCGGTGTTCGCGTGCGACGCGTCGAACGCGACGGTGTCCGGGTACGGGTTCTGCGACCGGACGAAGAGCAGCGCGGCGCGGGCGGCGGACCTGCTGGGGAGGCTGACGCTGGCGGAGAAGGTGGGGTTCCTGGTGAACAAGCAGGCGGCGCTGCCGCGGCTGGGGATCCCGGCGTACGAGTGGTGGTCGGAGGCGCTGCACGGCGTCTCCTACGTCGGCCCCGGCACCCGCTTCTCGACGCTCGTCCCCGGCGCCACCAGCTTCCCGCAGCCCATCCTCACCGCCGCCTCCTTCAACGCCTCCCTCTTCCGCGCCATTGGCGAGGTGGTGTCGACGGAGGCGA GGGCGATGCACAACGTCGGGCTGGCCGGGCTCACGTTCTGGAGCCCCAACATCAACATCTTCCGCGACCCGCGGTGGGGACGCGGCCAGGAGACGCCCGGCGAGGACCCGCTGCTCGCCAGCAAGTACGCCGTCGGCTACGTCACCGGCCTCCAGGACGCCGGC ]
[+] EMBL AK071973 [ TGCGATTCGGTTGACGTACTGTACAATAACCAACACTACACCAAGAACCCTGAAGACGCAGCTGCCATCACAATCAAATCAGGTTTGGACCTGAACTGCGGCAACTTCCTGGCGCAGCACACCGTGGCGGCGGTGCAGGCCGGGAAGCTGTCGGAGTCCGACGTCGACCGGGCCATCACCAACAACTTCATCGTGCTCATGCGACTCGGCTTCTTCGACGGCGACCCGAGGAAGCTCCCCTTCGGCAGCCTCGGCCCCAAGGACGTGTGCACGTCGTCGAACCAGGAGCTGGCCCGCGAGGCCGCGCGCCAGGGCATCGTCCTCCTCAAGAACACCGGCGCGCTGCCGCTCTCCGCCAAGTCCATCAAGTCCATGGCCGTCATTGGCCCCAACGCCAATGCCAGCTTCACCATGATCGGCAACTACGAAGGTACGCCGTGCAAGTACACGACGCCGCTCCAGGGCCTCGGCGCCAACGTCGCCACCGTGTACCAGCCGGGATGCACCAACGTCGGGTGCAGCGGGAACAGCCTCCAGCTCAGCGCCGCCACGCAGGCCGCGGCGAGCGCTGACGTGACCGTGCTGGTGGTCGGCGCCGACCAGTCCGTGGAGCGCGAGAGCCTGGACAGGACGAGCCTCCTCCTGCCAGGACAGCAGCCGCAGCTCGTCTCGGCTGTCGCCAACGCCTCCAGGGGCCCCGTCATCCTCGTCGTCATGTCCGGCGGGCCGTTCGACATCTCCTTCGCCAAGTCCAGCGACAAGATCTCCGCCATTCTTTGGGTCGGCTACCCCGGCGAAGCCGGTGGCGCCGCCCTCGCCGACATCCTCTTCGGATACCACAATCCTGGTGGAAGGTTGCCGGTGACGTGGTACCCGGCGTCGTTCGCCGACAAGGTCTCGATGACCGACATGCGCATGCGGCCGGACTCGTCGACCGGCTACCCCGGCCGGACATACCGGTTCTACACCGGCGACACGGTGTACGCCTTCGGCGACGGCCTGAGCTACACCAAATTCGCGCACAGCCTCGTGTCGGCGCCGGAGCAGGTGGCCGTGCAGCTGGTCGAGGGCCACGCCTGCCACACCGAGCACTGCTTCTCGGTGGAGGCCGCCGGCGAGCACTGCGGGAGCCTGTCCTTCGACGTCCACCTCCGCGTGCGGAACGCCGGCGGGATGGCCGGCGGGCACACCGTGTTCCTCTTCTCGTCGCCGCCGTCGGTGCACAGCGCGCCGGCGAAGCACCTGCTCGGGTTCGAGAAGGTGTCGCTGGAGCCCGGCCAGGCCGGCGTGGTGGCGTTCAAGGTGGACGTGTGCAAGGACCTGAGCGTCGTCGACGAGCTCGGCAACCGGAAGGTGGCGCTGGGCAGCCACACGCTGCACGTCGGCGACCTCAAGCACACGCTCAACCTGAGGGTTTAAATTGATTAGGAGTTGGAATTAAACGGGAGATTTGCTAGTGAGGAAGGGCCTCTGATCTGATTGATACACGGAGTTTGGAATTGGATTCGTCAAGGGAATTTGCATTACGAGTGGCCGTCAGAAATCAGAATTGGTTAATGGGGGGTGTAATAAGGACGGACTCCCCCGTTGGAGAGAATTGGATCCTC GGGGGTGGGTCTTTTGCT GTGGGTGTTAACATTTGATTTATTTGGAGGGTCGATTTGCAACTGTAATCTTTGGAAAAAGAAATTTCCGCAAGTGTAATTGATT GGAAGGGAAATTAGCTC ]
[+] EMBL CA757958 [ GAGAAGGTGTCGCTGGAGCCCGGCCAGGCCGGCGTGGTGGCGTTCAAGGTGGACGTGTGCAAGGACCTGAGCGTCGTCGACGAGCTCGGCAACCGGAAGGTGGCGCTGGGCAGCCACACGCTGCACGTCGGCGACCTCAAGCACACGCTCAACCTGAGGGTTTAAATTGATTAGGAGTTGGAATTAAACGGGAGATTTGCTAGTGAGGAAGGGCCTCTGATCTGATTGATACACGGAGTTTGGAATTGGATTCGTCAAGGGAATTTGCATTACGAGTGGCCGCCAGAAATCAGAATTGGTTAATGGGGGGTGTAATAAGGACGGACTCCCCCGTTGGAGAGAATTGGATCCTCGGGGGGTGGGTCTTTTGCTGGTGGGTGTTAACATTTGATTTATTTGGAGGGTCGATTTGCAACTGTAATCTTTGGAAAAAGAAATTTCCGCAAGTGTAATTGATTGGGAAGGGAAATTAGCTCATTTTCGTCCATTCAATTCAATTCAAAATTTCAAATCGTTGCTCTCAAAAAANAAAAAANAANNNNAANNAAAAAAAAAAAAAAAAAAAAAACCTCAACCTTGGGGGGGGGGCCCCGGGACCCAAATTCCCCTTTTAGTGGAGTGGTATAACCCGCCCCTCCTGGCCCGGGTTTTAAAACCGCGGGGACTTGGAAAAACCTGCGGGTCCCCAACTTTATTGGTTGGAAAACATTCCCCTTTTTCCCAGTTGGGGTATAACCAAAAAGGCCCCCACCTATCCCCCTTCCCAACTTGGCCCCCCCTTAATGGCGAATGGGGACCCCCCCTTTACCGGGCCATTAACCGGGGGGGGGGGGGGGGTTTCCCCAAGTGGCCGGTAATTTGCCACGGCCCTACGC]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||