cluster # 8178

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Oryza sativa
cluster # 8178 cluster # 8178 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8178#0 length = 1955 sequences # 5
consensusID : consensus_8178#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1955
fasta sequence
                              [GCTACAACGAGGGAAAGTTTAATATAGGCATGGCAAAAACCGATTTCATCCTCATGGATTCTTCTGAAGTTTCTGGTGCTAGTGGTACTAGTTGGACTGACGAAGAGACATTGCTTCTTTTAGAAGCTTTGGAAATTTTTGGTGGAAAATGGACTGAGATAGCTGAACATGTTGCTACAAAAACAAAAGCTCAGTGCATGCTGCACTTCCTTCAAATGCAAATTGAGGACCGCTTTCATGGCGATGAAGATATTAATCAAAATATCCAGGAAAACACAGAGCAAGCTTCAGCAGAAAAAGGCGCTGCTGAAATACCTGATAAAATGGAAGTTGAAGAGAAAGCAGAAGGAAAAGATACTGCAGGTGAGAAAACTCCAGAGAAAGCAGAGGGCAATAGTGTAGAAGCACAAACGGAAGATGGAAATGCTATTGAAAATAAAGATGCCAATAATTCAGGTGGCACAGATTCAGTTAAATCTCTAAACACTGATGAGCCAAAAAAATCTTCTGATGCTGACCCACCGAAAAGTTCATCCGATGCTGAACCTGTAGTGAAGGAAAATTCTGTTGATGTTGATACTTCTCGTGAAAATGCATCAAACTTTGCTATTGATACATTGAAATCCGCATTTGAGGCTGTTGGTTACTTCCCAGAACATGAAGGTTCATTTGCTGATGCAGGAAATCCTGTTATGGCACTGGCATCATTTTTAGCTGGTCTTGTGGAAGATGACACTGCAACCAATTCATGTCGAAGTTCACTANAAGCTATCTCTGAGGTTTCTCCTGCACTTCAGTTGGCAACTAGACACTGCTTTATTCTTGANGATCCACCAAGTGATGTGAAAGACATGTCTGGCAATGCAAGTACTACAAGCACAGATGGTGATAAAAGAAAAGACAAGGATAAGACTCAAGATTCAATTGATAGTGAAGTGGAAGGCATAAATAAAAAGGGAGAGACGGTTCTATCTGTTGAAGGGAAAAAAAGTTCTCCCATTTCACCAAAAGGCCAAGACACAGACAAAAAGGATGAATGTGATGAGGACCCCTCAGTGGATCCTAAACACAATAATGGTAAGGAGTCAGATGATCCTGTTTCTCTGGATAAAAGTGTGTCCAACAACAAAAAAGGAAATACCATGGAAACAAGTAATCCTGAAATGATAGAGGACAAAGCAAGTTCTGAAGTCAACCCTGCTGATGATTCATCTTTAGAAGGCAAGGTTGAGATGAAGAAGACCAAAGATGCAGTTGCTAATGCAACTACCGCACAGGAACAAAAGCAAAGCCAAATATTGGAAAATGGCAAGATGGAAGAACCTAAGAGTACTGAAGATGTTGCTGCCGATGAAGAGAACAGCTCTAGAGTAACCGCCAACCTCACGGATTCCATAACTAGGCTGAAACGAGCAGCCGCTACAGCTATTTCTGCAGCTGCTGTGAAGGCAAAACTCCTTGCTGACCATGAGGAAGAACAAGTCCGTCAGCTGGCTGCGCTGATGATTGACAAACTGTATCGGAAAGTAGAGGCGAAGGTGTCTTTTCTCACCGAAGTTGAACACCTGGTCCAGAGAACAAGAGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGGAGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTAGGCCAAACCAGCCCGGTGCAGCCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACCAAACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGCTCTATACCCCCATTCTTTAGAGGGATATCTCGAAAGCCATGAACTGTGTTGTAGTAGTACCATTCTTTTAGAAGCAGAGAATACTGTATGACGATCTGTTGTTACTGCATAAGAGCTTCTATAAAATTTTTCACGATTTTCACTTTGGAAAAAAA]

[+] EMBL CB665133             [GCTACAACGAGGGAAAGTTTAATATAGGCATGGCAAAAACCGATTTCATCCTCATGGATTCTTCTGAAGTTTCTGGTGCTAGTGGTACTAGTTGGACTGACGAAGAGACATTGCTTCTTTTAGAAGCTTTGGAAATTTTTGGTGGAAAATGGACTGAGATAGCTGAACATGTTGCTACAAAAACAAAAGCTCAGTGCATGCTGCACTTCCTTCAAATGCAAATTGAGGACCGCTTTCATGGCGATGAAGATATTAATCAAAATATCCAGGAAAACACAGAGCAAGCTTCAGCAGAAAAAGGCGCTGCTGAAATACCTGATAAAATGGAAGTTGAAGAGAAAGCAGAAGGAAAAGATACTGCAGGTGAGAAAACTCCAGAGAAAGCAGAGGGCAATAGTGTAGAAGCACAAACGGAAGATGGAAATGCTATTGAAAATAAAGATGCCAATAATTCAGGTGGCACAGATTCAGTTAAATCTCTAAACACTGATGAGCCAAAAAAATCTTCTGATGCTGACCCACCGAAAAGTTCATCCGATGCTGAACCTGTAGTGAAGGAAAATTCTGTTGATGTTGATACTTCTCGTGAAAATGCATCAAACTTTGCTATTGATACATTGAAATCCGCATTTGAGGCTGTTGGTTACTTCCCAGAACATGAAGGTTCATTTGCTGATGCAGGAAATCCTGTTATGGCACTGGCATCATTTTTAGCTGGTCTTGTGGAAGATGACACTGCAACCAATTCATGTCGAAGTTCACTANAAGCTATCTCTGAGGTTTCTCCTGCACTTCAGTTGGCAACTAGACACTGCTTTATTCTTGANGATCCACCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK058989             [                                                                                                                                                                      ACATGTTGCTACAAAAACAAAAGCTCAGTGCATGCTGCACTTCCTTCAAATGCAAATTGAGGACCGCTTTCATGGCGATGAAGATATTAATCAAAATATCCAGGAAAACACAGAGCAAGCTTCAGCAGAAAAAGGCGCTGCTGAAATACCTGATAAAATGGAAGTTGAAGAGAAAGCAGAAGGAAAAGATACTGCAGGTGAGAAAACTCCAGAGAAAGCAGAGGGCAATAGTGTAGAAGCACAAACGGAAGATGGAAATGCTATTGAAAATAAAGATGCCAATAATTCAGGTGGCACAGATTCAGTTAAATCTCTAAACACTGATGAGCCAAAAAAATCTTCTGATGCTGACCCACCGAAAAGTTCATCCGATGCTGAACCTGTAGTGAAGGAAAATTCTGTTGATGTTGATACTTCTCGTGAAAATGCATCAAACTTTGCTATTGATACATTGAAATCCGCATTTGAGGCTGTTGGTTACTTCCCAGAACATGAAGGTTCATTTGCTGATGCAGGAAATCCTGTTATGGCACTGGCATCATTTTTAGCTGGTCTTGTGGAAGATGACACTGCAACCAATTCATGTCGAAGTTCACTAAAAGCTATCTCTGAGGTTTCTCCTGCACTTCAGTTGGCAACTAGACACTGCTTTATTCTTGAGGATCCACCAAGTGATGTGAAAGACATGTCTGGCAATGCAAGTACTACAAGCACAGATGGTGATAAAAGAAAAGACAAGGATAAGACTCAAGATTCAATTGATAGTGAAGTGGAAGGCATAAATAAAAAGGGAGAGACGGTTCTATCTGTTGAAGGGAAAAAAAGTTCTCCCATTTCACCAAAAGGCCAAGACACAGACAAAAAGGATGAATGTGATGAGGACCCCTCAGTGGATCCTAAACACAATAATGGTAAGGAGTCAGATGATCCTGTTTCTCTGGATAAAAGTGTGTCCAACAACAAAAAAGGAAATACCATGGAAACAAGTAATCCTGAAATGATAGAGGACAAAGCAAGTTCTGAAGTCAACCCTGCTGATGATTCATCTTTAGAAGGCAAGGTTGAGATGAAGAAGACCAAAGATGCAGTTGCTAATGCAACTACCGCACAGGAACAAAAGCAAAGCCAAATATTGGAAAATGGCAAGATGGAAGAACCTAAGAGTACTGAAGATGTTGCTGCCGATGAAGAGAACAGCTCTAGAGTAACCGCCAACCTCACGGATTCCATAACTAGGCTGAAACGAGCAGCCGCTACAGCTATTTCTGCAGCTGCTGTGAAGGCAAAACTCCTTGCTGACCATGAGGAAGAACAAGTCCGTCAGCTGGCTGCGCTGATGATTGACAAACTGTATCGGAAAGTAGAGGCGAAGGTGTCTTTTCTCACCGAAGTTGAACACCTGGTCCAGAGAACAAGAGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGGAGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTAGGCCAAACCAGCCCGGTGCAGCCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACCAAACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGCTCTATACCCCCATTCTTTAGAGGGATATCTCGAAAGCCATGAACTGTGTTGTAGTAGTACCATTCTTTTAGAAGCAGAGAATACTGTATGACGATCTGTTGTTACTGCATAAGAGCTTCTATAAAATTTTTCACGATT                 ]
[-] EMBL CB665134             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAGTCAGATGATCCTGTTTCTCTGGATAAAAGTGTGTCCAACAACAAAAAAGGAAATACCATGGAAACAAGTAATCCTGAAATGATAGAGGACAAAGCAAGTTCTGAAGTCAACCCTGCTGATGATTCATCTTTAGAAGGCAAGGTTGAGATGAAGAAGACCAAAGATGCAGTTGCTAATGCAACTACCGCACAGGAACAAAAGCAAAGCCAAATATTGGAAAATGGCAAGATGGAAGAACCTAAGAGTACTGAAGATGTTGCTGCCGATGAAGAGAACAGCTCTAGAGTAACCGCCAACCTCACGGATTCCATAACTAGGCTGAAACGAGCAGCCGCTACAGCTATTTCTGCAGCTGCTGTGAAGGCAAAACTCCTTGCTGACCATGAGGAAGAACAAGTCCGTCAGCTGGCTGCGCTGATGATTGACAAACTGTATCGGAAAGTAGAGGCGAAGGTGTCTTTTCTCACCGAAGTTGAACACCTGGTCCAGAGAACAAGAGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGGAGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTAGGCCAAACCAGCCCGGTGCAGCCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACCAAACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGCTCTATACCCCCATTCTTTAGAGGGATATCTCGAAAGCCATGAACTGTGTTGTAGTAGTACCATTCTTTTAGAAGCAGAGAATACTGTATGACGATCTGTTGTTACTGCATAAGAGCTTCTATAAAATTTTTC                       ]
[+] EMBL CA756659             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TAGAGGACAAAGCAAGTTCTGAAGTCAACCCTGCTGATGATTCATCTTTAGAAGGCAAGGTTGAGATGAAGAAGACCAAAGATGCAGTTGCTAATGCAACTACCGCACAGGAAAAAAAGCAAAGCCAAATATTGGAAAATGGCAAGATGGAAGAACCTAAGAGTACTGAAGATGTTGCTGCCGATGAAGAGAACAGCTCTAGAGTAACCGCCAACCTCACGGATTCCATAACCAGGCTGAAACGAGCAGCCGCTACAGCTATTTCTGCAGCTGCTGTGAAGGCAAAACTCCTTGCTGACCATGAGGAAGAACAAATCCGTCAGCTGGCTGCGCTGATGATTGACAAACTGTATCGGAAAGTAGAGGCGAAGGTGTCTTTTCTCACCGAAGTTGAACACCTGGTCCAGAGAACAAGAGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGGAGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTAGGCCAAACCAGCCCGGTGCAGCCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACCAAACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGCTCTATACCCC                                                                                                                                                 ]
[+] EMBL BI812816             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGGAGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTA GCCAAACCAGCCCGGTGCA CCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACC AACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGCTCTATACCCCCATTCTTTAGAGGGATATCTCGAAAGCCATGAACTGTGTTGTAGTAGTACCATTCTTTTAGAAGCAGAGAATACTGTATGACGATCTGTTGTTACTGCATAAGAGCTTCTATAAAATTTTTCACGATTTTCACTTTGGAAAAAAA]




>consensus_8178#0
GCTACAACGAGGGAAAGTTTAATATAGGCATGGCAAAAACCGATTTCATCCTCATGGATT
CTTCTGAAGTTTCTGGTGCTAGTGGTACTAGTTGGACTGACGAAGAGACATTGCTTCTTT
TAGAAGCTTTGGAAATTTTTGGTGGAAAATGGACTGAGATAGCTGAACATGTTGCTACAA
AAACAAAAGCTCAGTGCATGCTGCACTTCCTTCAAATGCAAATTGAGGACCGCTTTCATG
GCGATGAAGATATTAATCAAAATATCCAGGAAAACACAGAGCAAGCTTCAGCAGAAAAAG
GCGCTGCTGAAATACCTGATAAAATGGAAGTTGAAGAGAAAGCAGAAGGAAAAGATACTG
CAGGTGAGAAAACTCCAGAGAAAGCAGAGGGCAATAGTGTAGAAGCACAAACGGAAGATG
GAAATGCTATTGAAAATAAAGATGCCAATAATTCAGGTGGCACAGATTCAGTTAAATCTC
TAAACACTGATGAGCCAAAAAAATCTTCTGATGCTGACCCACCGAAAAGTTCATCCGATG
CTGAACCTGTAGTGAAGGAAAATTCTGTTGATGTTGATACTTCTCGTGAAAATGCATCAA
ACTTTGCTATTGATACATTGAAATCCGCATTTGAGGCTGTTGGTTACTTCCCAGAACATG
AAGGTTCATTTGCTGATGCAGGAAATCCTGTTATGGCACTGGCATCATTTTTAGCTGGTC
TTGTGGAAGATGACACTGCAACCAATTCATGTCGAAGTTCACTANAAGCTATCTCTGAGG
TTTCTCCTGCACTTCAGTTGGCAACTAGACACTGCTTTATTCTTGANGATCCACCAAGTG
ATGTGAAAGACATGTCTGGCAATGCAAGTACTACAAGCACAGATGGTGATAAAAGAAAAG
ACAAGGATAAGACTCAAGATTCAATTGATAGTGAAGTGGAAGGCATAAATAAAAAGGGAG
AGACGGTTCTATCTGTTGAAGGGAAAAAAAGTTCTCCCATTTCACCAAAAGGCCAAGACA
CAGACAAAAAGGATGAATGTGATGAGGACCCCTCAGTGGATCCTAAACACAATAATGGTA
AGGAGTCAGATGATCCTGTTTCTCTGGATAAAAGTGTGTCCAACAACAAAAAAGGAAATA
CCATGGAAACAAGTAATCCTGAAATGATAGAGGACAAAGCAAGTTCTGAAGTCAACCCTG
CTGATGATTCATCTTTAGAAGGCAAGGTTGAGATGAAGAAGACCAAAGATGCAGTTGCTA
ATGCAACTACCGCACAGGAACAAAAGCAAAGCCAAATATTGGAAAATGGCAAGATGGAAG
AACCTAAGAGTACTGAAGATGTTGCTGCCGATGAAGAGAACAGCTCTAGAGTAACCGCCA
ACCTCACGGATTCCATAACTAGGCTGAAACGAGCAGCCGCTACAGCTATTTCTGCAGCTG
CTGTGAAGGCAAAACTCCTTGCTGACCATGAGGAAGAACAAGTCCGTCAGCTGGCTGCGC
TGATGATTGACAAACTGTATCGGAAAGTAGAGGCGAAGGTGTCTTTTCTCACCGAAGTTG
AACACCTGGTCCAGAGAACAAGAGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGG
AGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTAGGCCAAACCAGCCCG
GTGCAGCCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACCAA
ACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGC
TCTATACCCCCATTCTTTAGAGGGATATCTCGAAAGCCATGAACTGTGTTGTAGTAGTAC
CATTCTTTTAGAAGCAGAGAATACTGTATGACGATCTGTTGTTACTGCATAAGAGCTTCT
ATAAAATTTTTCACGATTTTCACTTTGGAAAAAAA
clustalw multiple alignements is not computed in this case