These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8178#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1955 fasta sequence [GCTACAACGAGGGAAAGTTTAATATAGGCATGGCAAAAACCGATTTCATCCTCATGGATTCTTCTGAAGTTTCTGGTGCTAGTGGTACTAGTTGGACTGACGAAGAGACATTGCTTCTTTTAGAAGCTTTGGAAATTTTTGGTGGAAAATGGACTGAGATAGCTGAACATGTTGCTACAAAAACAAAAGCTCAGTGCATGCTGCACTTCCTTCAAATGCAAATTGAGGACCGCTTTCATGGCGATGAAGATATTAATCAAAATATCCAGGAAAACACAGAGCAAGCTTCAGCAGAAAAAGGCGCTGCTGAAATACCTGATAAAATGGAAGTTGAAGAGAAAGCAGAAGGAAAAGATACTGCAGGTGAGAAAACTCCAGAGAAAGCAGAGGGCAATAGTGTAGAAGCACAAACGGAAGATGGAAATGCTATTGAAAATAAAGATGCCAATAATTCAGGTGGCACAGATTCAGTTAAATCTCTAAACACTGATGAGCCAAAAAAATCTTCTGATGCTGACCCACCGAAAAGTTCATCCGATGCTGAACCTGTAGTGAAGGAAAATTCTGTTGATGTTGATACTTCTCGTGAAAATGCATCAAACTTTGCTATTGATACATTGAAATCCGCATTTGAGGCTGTTGGTTACTTCCCAGAACATGAAGGTTCATTTGCTGATGCAGGAAATCCTGTTATGGCACTGGCATCATTTTTAGCTGGTCTTGTGGAAGATGACACTGCAACCAATTCATGTCGAAGTTCACTANAAGCTATCTCTGAGGTTTCTCCTGCACTTCAGTTGGCAACTAGACACTGCTTTATTCTTGANGATCCACCAAGTGATGTGAAAGACATGTCTGGCAATGCAAGTACTACAAGCACAGATGGTGATAAAAGAAAAGACAAGGATAAGACTCAAGATTCAATTGATAGTGAAGTGGAAGGCATAAATAAAAAGGGAGAGACGGTTCTATCTGTTGAAGGGAAAAAAAGTTCTCCCATTTCACCAAAAGGCCAAGACACAGACAAAAAGGATGAATGTGATGAGGACCCCTCAGTGGATCCTAAACACAATAATGGTAAGGAGTCAGATGATCCTGTTTCTCTGGATAAAAGTGTGTCCAACAACAAAAAAGGAAATACCATGGAAACAAGTAATCCTGAAATGATAGAGGACAAAGCAAGTTCTGAAGTCAACCCTGCTGATGATTCATCTTTAGAAGGCAAGGTTGAGATGAAGAAGACCAAAGATGCAGTTGCTAATGCAACTACCGCACAGGAACAAAAGCAAAGCCAAATATTGGAAAATGGCAAGATGGAAGAACCTAAGAGTACTGAAGATGTTGCTGCCGATGAAGAGAACAGCTCTAGAGTAACCGCCAACCTCACGGATTCCATAACTAGGCTGAAACGAGCAGCCGCTACAGCTATTTCTGCAGCTGCTGTGAAGGCAAAACTCCTTGCTGACCATGAGGAAGAACAAGTCCGTCAGCTGGCTGCGCTGATGATTGACAAACTGTATCGGAAAGTAGAGGCGAAGGTGTCTTTTCTCACCGAAGTTGAACACCTGGTCCAGAGAACAAGAGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGGAGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTAGGCCAAACCAGCCCGGTGCAGCCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACCAAACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGCTCTATACCCCCATTCTTTAGAGGGATATCTCGAAAGCCATGAACTGTGTTGTAGTAGTACCATTCTTTTAGAAGCAGAGAATACTGTATGACGATCTGTTGTTACTGCATAAGAGCTTCTATAAAATTTTTCACGATTTTCACTTTGGAAAAAAA] [+] EMBL CB665133 [GCTACAACGAGGGAAAGTTTAATATAGGCATGGCAAAAACCGATTTCATCCTCATGGATTCTTCTGAAGTTTCTGGTGCTAGTGGTACTAGTTGGACTGACGAAGAGACATTGCTTCTTTTAGAAGCTTTGGAAATTTTTGGTGGAAAATGGACTGAGATAGCTGAACATGTTGCTACAAAAACAAAAGCTCAGTGCATGCTGCACTTCCTTCAAATGCAAATTGAGGACCGCTTTCATGGCGATGAAGATATTAATCAAAATATCCAGGAAAACACAGAGCAAGCTTCAGCAGAAAAAGGCGCTGCTGAAATACCTGATAAAATGGAAGTTGAAGAGAAAGCAGAAGGAAAAGATACTGCAGGTGAGAAAACTCCAGAGAAAGCAGAGGGCAATAGTGTAGAAGCACAAACGGAAGATGGAAATGCTATTGAAAATAAAGATGCCAATAATTCAGGTGGCACAGATTCAGTTAAATCTCTAAACACTGATGAGCCAAAAAAATCTTCTGATGCTGACCCACCGAAAAGTTCATCCGATGCTGAACCTGTAGTGAAGGAAAATTCTGTTGATGTTGATACTTCTCGTGAAAATGCATCAAACTTTGCTATTGATACATTGAAATCCGCATTTGAGGCTGTTGGTTACTTCCCAGAACATGAAGGTTCATTTGCTGATGCAGGAAATCCTGTTATGGCACTGGCATCATTTTTAGCTGGTCTTGTGGAAGATGACACTGCAACCAATTCATGTCGAAGTTCACTANAAGCTATCTCTGAGGTTTCTCCTGCACTTCAGTTGGCAACTAGACACTGCTTTATTCTTGANGATCCACCAA ] [+] EMBL AK058989 [ ACATGTTGCTACAAAAACAAAAGCTCAGTGCATGCTGCACTTCCTTCAAATGCAAATTGAGGACCGCTTTCATGGCGATGAAGATATTAATCAAAATATCCAGGAAAACACAGAGCAAGCTTCAGCAGAAAAAGGCGCTGCTGAAATACCTGATAAAATGGAAGTTGAAGAGAAAGCAGAAGGAAAAGATACTGCAGGTGAGAAAACTCCAGAGAAAGCAGAGGGCAATAGTGTAGAAGCACAAACGGAAGATGGAAATGCTATTGAAAATAAAGATGCCAATAATTCAGGTGGCACAGATTCAGTTAAATCTCTAAACACTGATGAGCCAAAAAAATCTTCTGATGCTGACCCACCGAAAAGTTCATCCGATGCTGAACCTGTAGTGAAGGAAAATTCTGTTGATGTTGATACTTCTCGTGAAAATGCATCAAACTTTGCTATTGATACATTGAAATCCGCATTTGAGGCTGTTGGTTACTTCCCAGAACATGAAGGTTCATTTGCTGATGCAGGAAATCCTGTTATGGCACTGGCATCATTTTTAGCTGGTCTTGTGGAAGATGACACTGCAACCAATTCATGTCGAAGTTCACTAAAAGCTATCTCTGAGGTTTCTCCTGCACTTCAGTTGGCAACTAGACACTGCTTTATTCTTGAGGATCCACCAAGTGATGTGAAAGACATGTCTGGCAATGCAAGTACTACAAGCACAGATGGTGATAAAAGAAAAGACAAGGATAAGACTCAAGATTCAATTGATAGTGAAGTGGAAGGCATAAATAAAAAGGGAGAGACGGTTCTATCTGTTGAAGGGAAAAAAAGTTCTCCCATTTCACCAAAAGGCCAAGACACAGACAAAAAGGATGAATGTGATGAGGACCCCTCAGTGGATCCTAAACACAATAATGGTAAGGAGTCAGATGATCCTGTTTCTCTGGATAAAAGTGTGTCCAACAACAAAAAAGGAAATACCATGGAAACAAGTAATCCTGAAATGATAGAGGACAAAGCAAGTTCTGAAGTCAACCCTGCTGATGATTCATCTTTAGAAGGCAAGGTTGAGATGAAGAAGACCAAAGATGCAGTTGCTAATGCAACTACCGCACAGGAACAAAAGCAAAGCCAAATATTGGAAAATGGCAAGATGGAAGAACCTAAGAGTACTGAAGATGTTGCTGCCGATGAAGAGAACAGCTCTAGAGTAACCGCCAACCTCACGGATTCCATAACTAGGCTGAAACGAGCAGCCGCTACAGCTATTTCTGCAGCTGCTGTGAAGGCAAAACTCCTTGCTGACCATGAGGAAGAACAAGTCCGTCAGCTGGCTGCGCTGATGATTGACAAACTGTATCGGAAAGTAGAGGCGAAGGTGTCTTTTCTCACCGAAGTTGAACACCTGGTCCAGAGAACAAGAGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGGAGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTAGGCCAAACCAGCCCGGTGCAGCCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACCAAACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGCTCTATACCCCCATTCTTTAGAGGGATATCTCGAAAGCCATGAACTGTGTTGTAGTAGTACCATTCTTTTAGAAGCAGAGAATACTGTATGACGATCTGTTGTTACTGCATAAGAGCTTCTATAAAATTTTTCACGATT ] [-] EMBL CB665134 [ GAGTCAGATGATCCTGTTTCTCTGGATAAAAGTGTGTCCAACAACAAAAAAGGAAATACCATGGAAACAAGTAATCCTGAAATGATAGAGGACAAAGCAAGTTCTGAAGTCAACCCTGCTGATGATTCATCTTTAGAAGGCAAGGTTGAGATGAAGAAGACCAAAGATGCAGTTGCTAATGCAACTACCGCACAGGAACAAAAGCAAAGCCAAATATTGGAAAATGGCAAGATGGAAGAACCTAAGAGTACTGAAGATGTTGCTGCCGATGAAGAGAACAGCTCTAGAGTAACCGCCAACCTCACGGATTCCATAACTAGGCTGAAACGAGCAGCCGCTACAGCTATTTCTGCAGCTGCTGTGAAGGCAAAACTCCTTGCTGACCATGAGGAAGAACAAGTCCGTCAGCTGGCTGCGCTGATGATTGACAAACTGTATCGGAAAGTAGAGGCGAAGGTGTCTTTTCTCACCGAAGTTGAACACCTGGTCCAGAGAACAAGAGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGGAGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTAGGCCAAACCAGCCCGGTGCAGCCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACCAAACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGCTCTATACCCCCATTCTTTAGAGGGATATCTCGAAAGCCATGAACTGTGTTGTAGTAGTACCATTCTTTTAGAAGCAGAGAATACTGTATGACGATCTGTTGTTACTGCATAAGAGCTTCTATAAAATTTTTC ] [+] EMBL CA756659 [ TAGAGGACAAAGCAAGTTCTGAAGTCAACCCTGCTGATGATTCATCTTTAGAAGGCAAGGTTGAGATGAAGAAGACCAAAGATGCAGTTGCTAATGCAACTACCGCACAGGAAAAAAAGCAAAGCCAAATATTGGAAAATGGCAAGATGGAAGAACCTAAGAGTACTGAAGATGTTGCTGCCGATGAAGAGAACAGCTCTAGAGTAACCGCCAACCTCACGGATTCCATAACCAGGCTGAAACGAGCAGCCGCTACAGCTATTTCTGCAGCTGCTGTGAAGGCAAAACTCCTTGCTGACCATGAGGAAGAACAAATCCGTCAGCTGGCTGCGCTGATGATTGACAAACTGTATCGGAAAGTAGAGGCGAAGGTGTCTTTTCTCACCGAAGTTGAACACCTGGTCCAGAGAACAAGAGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGGAGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTAGGCCAAACCAGCCCGGTGCAGCCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACCAAACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGCTCTATACCCC ] [+] EMBL BI812816 [ AGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGGAGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTA GCCAAACCAGCCCGGTGCA CCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACC AACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGCTCTATACCCCCATTCTTTAGAGGGATATCTCGAAAGCCATGAACTGTGTTGTAGTAGTACCATTCTTTTAGAAGCAGAGAATACTGTATGACGATCTGTTGTTACTGCATAAGAGCTTCTATAAAATTTTTCACGATTTTCACTTTGGAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||