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Oryza sativa
cluster # 8178 cluster # 8178       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8178#0 length = 1955 sequences # 5  

consensusID : consensus_8178#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1955
fasta sequence
                              [GCTACAACGAGGGAAAGTTTAATATAGGCATGGCAAAAACCGATTTCATCCTCATGGATTCTTCTGAAGTTTCTGGTGCTAGTGGTACTAGTTGGACTGACGAAGAGACATTGCTTCTTTTAGAAGCTTTGGAAATTTTTGGTGGAAAATGGACTGAGATAGCTGAACATGTTGCTACAAAAACAAAAGCTCAGTGCATGCTGCACTTCCTTCAAATGCAAATTGAGGACCGCTTTCATGGCGATGAAGATATTAATCAAAATATCCAGGAAAACACAGAGCAAGCTTCAGCAGAAAAAGGCGCTGCTGAAATACCTGATAAAATGGAAGTTGAAGAGAAAGCAGAAGGAAAAGATACTGCAGGTGAGAAAACTCCAGAGAAAGCAGAGGGCAATAGTGTAGAAGCACAAACGGAAGATGGAAATGCTATTGAAAATAAAGATGCCAATAATTCAGGTGGCACAGATTCAGTTAAATCTCTAAACACTGATGAGCCAAAAAAATCTTCTGATGCTGACCCACCGAAAAGTTCATCCGATGCTGAACCTGTAGTGAAGGAAAATTCTGTTGATGTTGATACTTCTCGTGAAAATGCATCAAACTTTGCTATTGATACATTGAAATCCGCATTTGAGGCTGTTGGTTACTTCCCAGAACATGAAGGTTCATTTGCTGATGCAGGAAATCCTGTTATGGCACTGGCATCATTTTTAGCTGGTCTTGTGGAAGATGACACTGCAACCAATTCATGTCGAAGTTCACTANAAGCTATCTCTGAGGTTTCTCCTGCACTTCAGTTGGCAACTAGACACTGCTTTATTCTTGANGATCCACCAAGTGATGTGAAAGACATGTCTGGCAATGCAAGTACTACAAGCACAGATGGTGATAAAAGAAAAGACAAGGATAAGACTCAAGATTCAATTGATAGTGAAGTGGAAGGCATAAATAAAAAGGGAGAGACGGTTCTATCTGTTGAAGGGAAAAAAAGTTCTCCCATTTCACCAAAAGGCCAAGACACAGACAAAAAGGATGAATGTGATGAGGACCCCTCAGTGGATCCTAAACACAATAATGGTAAGGAGTCAGATGATCCTGTTTCTCTGGATAAAAGTGTGTCCAACAACAAAAAAGGAAATACCATGGAAACAAGTAATCCTGAAATGATAGAGGACAAAGCAAGTTCTGAAGTCAACCCTGCTGATGATTCATCTTTAGAAGGCAAGGTTGAGATGAAGAAGACCAAAGATGCAGTTGCTAATGCAACTACCGCACAGGAACAAAAGCAAAGCCAAATATTGGAAAATGGCAAGATGGAAGAACCTAAGAGTACTGAAGATGTTGCTGCCGATGAAGAGAACAGCTCTAGAGTAACCGCCAACCTCACGGATTCCATAACTAGGCTGAAACGAGCAGCCGCTACAGCTATTTCTGCAGCTGCTGTGAAGGCAAAACTCCTTGCTGACCATGAGGAAGAACAAGTCCGTCAGCTGGCTGCGCTGATGATTGACAAACTGTATCGGAAAGTAGAGGCGAAGGTGTCTTTTCTCACCGAAGTTGAACACCTGGTCCAGAGAACAAGAGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGGAGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTAGGCCAAACCAGCCCGGTGCAGCCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACCAAACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGCTCTATACCCCCATTCTTTAGAGGGATATCTCGAAAGCCATGAACTGTGTTGTAGTAGTACCATTCTTTTAGAAGCAGAGAATACTGTATGACGATCTGTTGTTACTGCATAAGAGCTTCTATAAAATTTTTCACGATTTTCACTTTGGAAAAAAA]

[+] EMBL CB665133             [GCTACAACGAGGGAAAGTTTAATATAGGCATGGCAAAAACCGATTTCATCCTCATGGATTCTTCTGAAGTTTCTGGTGCTAGTGGTACTAGTTGGACTGACGAAGAGACATTGCTTCTTTTAGAAGCTTTGGAAATTTTTGGTGGAAAATGGACTGAGATAGCTGAACATGTTGCTACAAAAACAAAAGCTCAGTGCATGCTGCACTTCCTTCAAATGCAAATTGAGGACCGCTTTCATGGCGATGAAGATATTAATCAAAATATCCAGGAAAACACAGAGCAAGCTTCAGCAGAAAAAGGCGCTGCTGAAATACCTGATAAAATGGAAGTTGAAGAGAAAGCAGAAGGAAAAGATACTGCAGGTGAGAAAACTCCAGAGAAAGCAGAGGGCAATAGTGTAGAAGCACAAACGGAAGATGGAAATGCTATTGAAAATAAAGATGCCAATAATTCAGGTGGCACAGATTCAGTTAAATCTCTAAACACTGATGAGCCAAAAAAATCTTCTGATGCTGACCCACCGAAAAGTTCATCCGATGCTGAACCTGTAGTGAAGGAAAATTCTGTTGATGTTGATACTTCTCGTGAAAATGCATCAAACTTTGCTATTGATACATTGAAATCCGCATTTGAGGCTGTTGGTTACTTCCCAGAACATGAAGGTTCATTTGCTGATGCAGGAAATCCTGTTATGGCACTGGCATCATTTTTAGCTGGTCTTGTGGAAGATGACACTGCAACCAATTCATGTCGAAGTTCACTANAAGCTATCTCTGAGGTTTCTCCTGCACTTCAGTTGGCAACTAGACACTGCTTTATTCTTGANGATCCACCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK058989             [                                                                                                                                                                      ACATGTTGCTACAAAAACAAAAGCTCAGTGCATGCTGCACTTCCTTCAAATGCAAATTGAGGACCGCTTTCATGGCGATGAAGATATTAATCAAAATATCCAGGAAAACACAGAGCAAGCTTCAGCAGAAAAAGGCGCTGCTGAAATACCTGATAAAATGGAAGTTGAAGAGAAAGCAGAAGGAAAAGATACTGCAGGTGAGAAAACTCCAGAGAAAGCAGAGGGCAATAGTGTAGAAGCACAAACGGAAGATGGAAATGCTATTGAAAATAAAGATGCCAATAATTCAGGTGGCACAGATTCAGTTAAATCTCTAAACACTGATGAGCCAAAAAAATCTTCTGATGCTGACCCACCGAAAAGTTCATCCGATGCTGAACCTGTAGTGAAGGAAAATTCTGTTGATGTTGATACTTCTCGTGAAAATGCATCAAACTTTGCTATTGATACATTGAAATCCGCATTTGAGGCTGTTGGTTACTTCCCAGAACATGAAGGTTCATTTGCTGATGCAGGAAATCCTGTTATGGCACTGGCATCATTTTTAGCTGGTCTTGTGGAAGATGACACTGCAACCAATTCATGTCGAAGTTCACTAAAAGCTATCTCTGAGGTTTCTCCTGCACTTCAGTTGGCAACTAGACACTGCTTTATTCTTGAGGATCCACCAAGTGATGTGAAAGACATGTCTGGCAATGCAAGTACTACAAGCACAGATGGTGATAAAAGAAAAGACAAGGATAAGACTCAAGATTCAATTGATAGTGAAGTGGAAGGCATAAATAAAAAGGGAGAGACGGTTCTATCTGTTGAAGGGAAAAAAAGTTCTCCCATTTCACCAAAAGGCCAAGACACAGACAAAAAGGATGAATGTGATGAGGACCCCTCAGTGGATCCTAAACACAATAATGGTAAGGAGTCAGATGATCCTGTTTCTCTGGATAAAAGTGTGTCCAACAACAAAAAAGGAAATACCATGGAAACAAGTAATCCTGAAATGATAGAGGACAAAGCAAGTTCTGAAGTCAACCCTGCTGATGATTCATCTTTAGAAGGCAAGGTTGAGATGAAGAAGACCAAAGATGCAGTTGCTAATGCAACTACCGCACAGGAACAAAAGCAAAGCCAAATATTGGAAAATGGCAAGATGGAAGAACCTAAGAGTACTGAAGATGTTGCTGCCGATGAAGAGAACAGCTCTAGAGTAACCGCCAACCTCACGGATTCCATAACTAGGCTGAAACGAGCAGCCGCTACAGCTATTTCTGCAGCTGCTGTGAAGGCAAAACTCCTTGCTGACCATGAGGAAGAACAAGTCCGTCAGCTGGCTGCGCTGATGATTGACAAACTGTATCGGAAAGTAGAGGCGAAGGTGTCTTTTCTCACCGAAGTTGAACACCTGGTCCAGAGAACAAGAGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGGAGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTAGGCCAAACCAGCCCGGTGCAGCCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACCAAACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGCTCTATACCCCCATTCTTTAGAGGGATATCTCGAAAGCCATGAACTGTGTTGTAGTAGTACCATTCTTTTAGAAGCAGAGAATACTGTATGACGATCTGTTGTTACTGCATAAGAGCTTCTATAAAATTTTTCACGATT                 ]
[-] EMBL CB665134             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAGTCAGATGATCCTGTTTCTCTGGATAAAAGTGTGTCCAACAACAAAAAAGGAAATACCATGGAAACAAGTAATCCTGAAATGATAGAGGACAAAGCAAGTTCTGAAGTCAACCCTGCTGATGATTCATCTTTAGAAGGCAAGGTTGAGATGAAGAAGACCAAAGATGCAGTTGCTAATGCAACTACCGCACAGGAACAAAAGCAAAGCCAAATATTGGAAAATGGCAAGATGGAAGAACCTAAGAGTACTGAAGATGTTGCTGCCGATGAAGAGAACAGCTCTAGAGTAACCGCCAACCTCACGGATTCCATAACTAGGCTGAAACGAGCAGCCGCTACAGCTATTTCTGCAGCTGCTGTGAAGGCAAAACTCCTTGCTGACCATGAGGAAGAACAAGTCCGTCAGCTGGCTGCGCTGATGATTGACAAACTGTATCGGAAAGTAGAGGCGAAGGTGTCTTTTCTCACCGAAGTTGAACACCTGGTCCAGAGAACAAGAGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGGAGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTAGGCCAAACCAGCCCGGTGCAGCCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACCAAACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGCTCTATACCCCCATTCTTTAGAGGGATATCTCGAAAGCCATGAACTGTGTTGTAGTAGTACCATTCTTTTAGAAGCAGAGAATACTGTATGACGATCTGTTGTTACTGCATAAGAGCTTCTATAAAATTTTTC                       ]
[+] EMBL CA756659             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TAGAGGACAAAGCAAGTTCTGAAGTCAACCCTGCTGATGATTCATCTTTAGAAGGCAAGGTTGAGATGAAGAAGACCAAAGATGCAGTTGCTAATGCAACTACCGCACAGGAAAAAAAGCAAAGCCAAATATTGGAAAATGGCAAGATGGAAGAACCTAAGAGTACTGAAGATGTTGCTGCCGATGAAGAGAACAGCTCTAGAGTAACCGCCAACCTCACGGATTCCATAACCAGGCTGAAACGAGCAGCCGCTACAGCTATTTCTGCAGCTGCTGTGAAGGCAAAACTCCTTGCTGACCATGAGGAAGAACAAATCCGTCAGCTGGCTGCGCTGATGATTGACAAACTGTATCGGAAAGTAGAGGCGAAGGTGTCTTTTCTCACCGAAGTTGAACACCTGGTCCAGAGAACAAGAGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGGAGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTAGGCCAAACCAGCCCGGTGCAGCCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACCAAACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGCTCTATACCCC                                                                                                                                                 ]
[+] EMBL BI812816             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGGAGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTA GCCAAACCAGCCCGGTGCA CCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACC AACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGCTCTATACCCCCATTCTTTAGAGGGATATCTCGAAAGCCATGAACTGTGTTGTAGTAGTACCATTCTTTTAGAAGCAGAGAATACTGTATGACGATCTGTTGTTACTGCATAAGAGCTTCTATAAAATTTTTCACGATTTTCACTTTGGAAAAAAA]


>consensus_8178#0 GCTACAACGAGGGAAAGTTTAATATAGGCATGGCAAAAACCGATTTCATCCTCATGGATT CTTCTGAAGTTTCTGGTGCTAGTGGTACTAGTTGGACTGACGAAGAGACATTGCTTCTTT TAGAAGCTTTGGAAATTTTTGGTGGAAAATGGACTGAGATAGCTGAACATGTTGCTACAA AAACAAAAGCTCAGTGCATGCTGCACTTCCTTCAAATGCAAATTGAGGACCGCTTTCATG GCGATGAAGATATTAATCAAAATATCCAGGAAAACACAGAGCAAGCTTCAGCAGAAAAAG GCGCTGCTGAAATACCTGATAAAATGGAAGTTGAAGAGAAAGCAGAAGGAAAAGATACTG CAGGTGAGAAAACTCCAGAGAAAGCAGAGGGCAATAGTGTAGAAGCACAAACGGAAGATG GAAATGCTATTGAAAATAAAGATGCCAATAATTCAGGTGGCACAGATTCAGTTAAATCTC TAAACACTGATGAGCCAAAAAAATCTTCTGATGCTGACCCACCGAAAAGTTCATCCGATG CTGAACCTGTAGTGAAGGAAAATTCTGTTGATGTTGATACTTCTCGTGAAAATGCATCAA ACTTTGCTATTGATACATTGAAATCCGCATTTGAGGCTGTTGGTTACTTCCCAGAACATG AAGGTTCATTTGCTGATGCAGGAAATCCTGTTATGGCACTGGCATCATTTTTAGCTGGTC TTGTGGAAGATGACACTGCAACCAATTCATGTCGAAGTTCACTANAAGCTATCTCTGAGG TTTCTCCTGCACTTCAGTTGGCAACTAGACACTGCTTTATTCTTGANGATCCACCAAGTG ATGTGAAAGACATGTCTGGCAATGCAAGTACTACAAGCACAGATGGTGATAAAAGAAAAG ACAAGGATAAGACTCAAGATTCAATTGATAGTGAAGTGGAAGGCATAAATAAAAAGGGAG AGACGGTTCTATCTGTTGAAGGGAAAAAAAGTTCTCCCATTTCACCAAAAGGCCAAGACA CAGACAAAAAGGATGAATGTGATGAGGACCCCTCAGTGGATCCTAAACACAATAATGGTA AGGAGTCAGATGATCCTGTTTCTCTGGATAAAAGTGTGTCCAACAACAAAAAAGGAAATA CCATGGAAACAAGTAATCCTGAAATGATAGAGGACAAAGCAAGTTCTGAAGTCAACCCTG CTGATGATTCATCTTTAGAAGGCAAGGTTGAGATGAAGAAGACCAAAGATGCAGTTGCTA ATGCAACTACCGCACAGGAACAAAAGCAAAGCCAAATATTGGAAAATGGCAAGATGGAAG AACCTAAGAGTACTGAAGATGTTGCTGCCGATGAAGAGAACAGCTCTAGAGTAACCGCCA ACCTCACGGATTCCATAACTAGGCTGAAACGAGCAGCCGCTACAGCTATTTCTGCAGCTG CTGTGAAGGCAAAACTCCTTGCTGACCATGAGGAAGAACAAGTCCGTCAGCTGGCTGCGC TGATGATTGACAAACTGTATCGGAAAGTAGAGGCGAAGGTGTCTTTTCTCACCGAAGTTG AACACCTGGTCCAGAGAACAAGAGAATACACTGAAAAGACTAGAAAGAAGCTTCTGATGG AGCGAAATGCGATAATCGCTGCCCGCATGGGTTCATTGCCATCTAGGCCAAACCAGCCCG GTGCAGCCGGCAACAGATTACCAGCTGGATATGGAGGCCCCATCGTGAGACCACCACCAA ACGCAATGCCCCGCCCTAGCAGCTGATCGAGCTGACCGTGGTGATCCGGACAACTAGTGC TCTATACCCCCATTCTTTAGAGGGATATCTCGAAAGCCATGAACTGTGTTGTAGTAGTAC CATTCTTTTAGAAGCAGAGAATACTGTATGACGATCTGTTGTTACTGCATAAGAGCTTCT ATAAAATTTTTCACGATTTTCACTTTGGAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)