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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8193 cluster # 8193       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8193#0 length = 803 sequences # 5  

consensusID : consensus_8193#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 803
fasta sequence
                              [TTGAAAATCGCTTTGCCTCTTCTCAAAATGAATAGTATCCGACTTCAGAGTGGATATGATACATGGTTTCTAGCATTCTCTTCAATACACAGCTCAGCTAATGATGCTGCGAATGTGCAAATAAACACCTCAACTAGCATCCCTCTCTTATCTCTAAACTGACTGAAAAAGAATCACTTGGGTAATGTAATAAATTGTGCCTGTCTATTTGTCAAAAATGTACACTATACAATGTAAATAGGAAATTTAAGACAGTTTGGAGATCTTGTGTTGCCTGGCATCATCCTGCCATATAAATACTAGATTCTTGTGAAGCAGCAAATTATCACGACCTGTGGATCTCACCCATATATGTGAAAATAGGAATTGGTGTATTTGTATCTGACTCTGGGGGATAAATATATGTTGATATATGTCATCTAGCAAGAGGTTCAAGCTGGACCTCCATCACACCAGAAGGACTTGATTCTGAATTCCTGTCTGTACTGTCAGGATGCAAAAGATCAACTGAATCGTCTTCCTCGGTGTTACCTAACACCCAGTGCCCTCTAGAGCTTGTGTCGCCGCTCCTCCGTTTGACCTCTTTATACTCCAAGTAAAGTGTTATAACTATAGCAGAAAGCACCCACAGCATCAAGGCCCAAGTGAGCTCCTCTACATTCTCGCTATCATACCTATGGCCTAAATGCTTCATTCCAGTGAAAAGTGCCACAATTCCGACTATGATTGCCGACCTGCCTGTGATAACATGAAGGTATTCCCAGAGGACACGATTCCAGGATGAAGCCTCCCCATTAGCTGGT]

[+] EMBL CB664403             [ TGAAAATCGCTTTGCCTCTTCTCAAAATGAATAGTATCCGACTTCAGAGTGGATATGATACATGGTTTCTAGCATTCTCTTCAATACACAGCTCAGCTAATGATGCTGCGAATGTGCAAATAAACACCTCAACTAGCATCCCTCTCTTATCTCTAAACTGACTGAAAAAGAATCACTTGGGTAATGTAATAAATTGTGCCTGTCTATTTGTCAAAAATGTACACTATACAATGTAAATAGGAAATTTAAGACAGTTTGGAGATCTTGTGTTGCCTGGCATCATCCTGCCATATAAATACTAGATTCTTGTGAAGCAGCAAATTATCACGACCTGTGGATCTCACCCATATATGTGAAAATAGGAATTGGTGTATTTGTATCTGACTCTGGGGGATAAATATATGTTGATATATGTCATCTAGCAAGAGGTTCAAGCTGGACCTCCATCACACCAGAAGGACTTGATTCTGAATTCCTGTCTGTACTGTCAGGATGCAAAAGATCAACTGAATCGTCTTCCTCGGTGTTACCTAACACCCAGTGCCCTCTAGAGCTTGTGTCGCCGCTCCTCCGTTTGACCTCTTTATACTCCAAGTAAAGTGTTATAACTATAGCAGAAAGCACCCACAGCATCAAGGCCCAAGTGAGCTCCTCTACATTCTCGCTATCATACCTATGGCCTAAATGCTTCATTCCAGTGAAAAGTGCCACAATTCCGACTATGATTGCCGACCTGCCTGTGATAACATGAAGGTATTCCCAGAGGACACGATTCCAGGATGAAGCCTCCCCATTAGCTGGT]
[-] EMBL CA765447             [tgtAAAATCGCTTTGCCTCTTCTCAAAATGAATAGTATCCGACTTCAGAGTGGATATGATACATGGTTTCTAGCATTCTCTTCAATACACAGCTCAGCTAATGATGCTGCGAATGTGCAAATAAACACCTCAACTAGCATCCCTCTCTTATCTCTAAACTGACTGAAAAAGAATCACTTGGGTAATGTAATAAATTGTGCCTGTCTATTTGTCAAAAATGTACACTATACAATGTAAATAGGAAATTTAAGACAGTTTGGAGATCTTGTGTTGCCTGGCATCATCCTGCCATATAAATACTAGATTCTTGTGAAGCAGCAAATTATCACGACCTGTGGATCTCACCCATATATGTGAAAATAGGAATTGGTGTATTTGTATCTGACTCTGGGGGATAAATATATGTTGATATATGTCATCTAGCAAGAGGTTCAAGCTGGACCTCCATCACACCAGAAGGACTTGATTCTGAATTCCTGTCTGTACTGTCAGGATGCAAAAGATCAACTGAATCGTC TCCTCGGTGTTACCTAACA                                                                                                                                                                                                                                                                          ]
[+] EMBL CB637685             [       tcttTTTGCCTCTTCTCAAAATG ATAGTATCCGACTTCAGAGTGGATATGATACATGGTTTCTAGCATTCTCTTCAATACACAGCTCAGCTAATGATGCTGCGAATGTGCAAATAAACACCTCAACTAGCATCCCTCTCTTATCTCTAAACTGACTGAAAAAGAATCACTTGGGTAATGTAATAAATTGTGCCTGTCTATTTGTCAAAAATGTACACTATACAATGTAAATAGGAAATTTAAGACAGTTTGGAGATCTTGTGTTGCCTGGCATCATCCTGCCATATAAATACTAAATTCTTGTGAAGCAGCAAATTATCACGACCTGTGGATCTCACCCATATATGTGAAAATAGGAATTGGTGTATTTGTATCTGACTCTGGGGGATAAATATATGTTGATATATGTCATCTAGCAAGAGGTTCAAGCTGGACCTCCATCACACCAGAAGGACTTGATTCTGAATTCCTGTCTGTACTGTCAGGATGCAAAAGATCAACTGAATCGTCTTCCTCGGTGTTACCTAACACCCAGTGCCCTCTAGAGCTTGTGTCGCCGC                                                                                                                                                                                                                                            ]
[-] EMBL AK058533             [           TTTGCCTCTTCTCAAAATGAATAGTATCCGACTTCAGAGTGGATATGATACATGGTTTCTAGCATTCTCTTCAATACACAGCTCAGCTAATGATGCTGCGAATGTGCAAATAAACACCTCAACTAGCATCCCTCTCTTATCTCTAAACTGACTGAAAAAGAATCACTTGGGTAATGTAATAAATTGTGCCTGTCTATTTGTCAAAAATGTACACTATACAATGTAAATAGGAAATTTAAGACAGTTTGGAGATCTTGTGTTGCCTGGCATCATCCTGCCATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CA767612             [                          AATGAATAGTATCCGACTTCAGAGTGGATATGATACATGGTTTCTAGCATTCTCTTCAATACACAGCTCAGCTAATGATGCTGCGAATGTGCAAATAANCACCTCAACTAGCATCCCTCTCTTATCTCTAAACTGACTGAAAAAGAATCACTTGGGTAATGTAATAAATTGTGCCTGTCTATTTGTCAAAAATGTACACTATACAATGTAAATAGGAAATTTAAGACAGTTTGGAGATCTTGTGTTGCCTGGCATCATCCTGCCATATAAATACTAGATTCTTGTGAAGCAGCAAATTATCACGACCTGTGGATCTCACCCATATATGTGAAAATAGGAATTGGTGTATTTGTATCTGACTCTGGGGGATAAATATATGTTGATATATGTCATCTAGCAAGAGGTTCAAGCTGGACCTCCATCACACCAGAAGGACTTGATTCTGAATTCCTGTCTGTACTGTCAGGATGCAAAAGATCAACTGAATCGTCTTCCTCGGTGTTACCTAACACCCAGTGCCCTCTAGAGCTTGTGTCGCCGCTCCTCCGTTTGACCTCTTTATACTCCAAGTAAAGTGTTATAACTATAGCAGAAAGCACCCACAGCATCAAGGCCCAAGTGAGCTCCTCTACATTCTCGCTATCATACCTATGGCCTAAATGCTTCATTCCAGTGAAAAGTGCC                                                                                             ]


>consensus_8193#0 TTGAAAATCGCTTTGCCTCTTCTCAAAATGAATAGTATCCGACTTCAGAGTGGATATGAT ACATGGTTTCTAGCATTCTCTTCAATACACAGCTCAGCTAATGATGCTGCGAATGTGCAA ATAAACACCTCAACTAGCATCCCTCTCTTATCTCTAAACTGACTGAAAAAGAATCACTTG GGTAATGTAATAAATTGTGCCTGTCTATTTGTCAAAAATGTACACTATACAATGTAAATA GGAAATTTAAGACAGTTTGGAGATCTTGTGTTGCCTGGCATCATCCTGCCATATAAATAC TAGATTCTTGTGAAGCAGCAAATTATCACGACCTGTGGATCTCACCCATATATGTGAAAA TAGGAATTGGTGTATTTGTATCTGACTCTGGGGGATAAATATATGTTGATATATGTCATC TAGCAAGAGGTTCAAGCTGGACCTCCATCACACCAGAAGGACTTGATTCTGAATTCCTGT CTGTACTGTCAGGATGCAAAAGATCAACTGAATCGTCTTCCTCGGTGTTACCTAACACCC AGTGCCCTCTAGAGCTTGTGTCGCCGCTCCTCCGTTTGACCTCTTTATACTCCAAGTAAA GTGTTATAACTATAGCAGAAAGCACCCACAGCATCAAGGCCCAAGTGAGCTCCTCTACAT TCTCGCTATCATACCTATGGCCTAAATGCTTCATTCCAGTGAAAAGTGCCACAATTCCGA CTATGATTGCCGACCTGCCTGTGATAACATGAAGGTATTCCCAGAGGACACGATTCCAGG ATGAAGCCTCCCCATTAGCTGGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)