Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8202 cluster # 8202       Sequences # 5       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8202#0 length = 2296 sequences # 4  
 consensus_8202#1 length = 1954 sequences # 1  
consensusID : consensus_8202#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2296
fasta sequence 
                              [TGCGGCCCGCTCCAACATCAGAATGGTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATGACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAACTACTACCAAGAATCGAGCTCCTGTTGCTTCCTCTAGCCTCTGTCTAGTCTGAAGCCTGAACCCTTGCATGCTCCAGTTTCTGCACTGTGTGAGCAGAATTATTTCTGAAGTCTGAACAGCAGCCAAGCAAAAGAAGGCATCTGACAGTAAGATATGAACACCTGTGTTTCAGGTGAATTTGGCTGATGATTCTGCCCCTGTGTTCTGATTTATTCAAGACACTAGCAACTGAATCATCAGGTGTTGGTCGCGAATATCCCAGTGATGGATTCATCGAGTTCTTTCGTGCTCGTGGTGCTGATTCTCCAAGCTGTCGTGATCGG-TTGCTCCTCACTGGACGAGCTACCCGTTCAGCTT-AGCAACCGGAGGCTAC-TTCAT-GACAGAAATCACGCTGCTCTACTCTACAAAGATCATTTCCCAACAGTTGGAAACATGACGTTTCCAACATCTCATCAACTGCAAAATGATCCAAATTACAAGCCTCTAGATAGTTCATCCCACCCTGCCGAGGCTTCTGCAAATAAAGGATCAAGCAAAGGATTCAAGAAGTGGCTGTATATAGTTGTGATTCCAGTGGCTGGTTTGATTATGCTTGCTGGCATGGCATGGATGTTCTTGCCATGCCGCAAGAAATCCGTTGCGACTATTGGCCCTTGGAGGACTGGATCAGTGGCCAGCTGCAGAAGGCATTTGTGTCAGGAGTGCCCCAATTACAGCGTCCAGAACTGGAGCGTGCTTGTGAGGACTTCAGTAATATTGTGGCAAGTCATCCATACTACACTGTCTACAAGGGAACCTTATCATCCGGTGTTGAGATCGCCGTTGTATCGACAACGATTAAATCCAGCAAAGATTGGTCAAAGCACTGTGAAGATTGTTTCAGGAAAAAGATAGAGTCGCTCTCGCGAATAAATCATAAGAATTTCATCAATCTGCTGGGGTTTTGTGAGGAGGAAGAACCTTTCACGAGGGTGATGGTGTTCGAATACGCACCAAATGGGACGCTTTATGAGAATCTCCATGATGAGGCCTTTGATCACATCGACTGGAGAAGTAGAATGAGAATAATCATGGGAATAGCTTACTGTATTCAGCACATGCATGAGCTCAACCCTGCCAACGTGCACCCTGATCTGCATTCAAGTGCAGTATTTCTTTCTGAAGATTGTGCTGCAAAGATTGCAGACTTGAGTGTTTGGCAGGAAGTGGTTTCCGACGGCAAAAAGTCGACAGCGAATAATGATCATCATGAACCAATATCTGCTAGACTGGCAGGGAACGTTTACAGTTTTGGCATACTGCTTCTTGAAATCATCTCAGGGAAACCCCCTTACTCTGAAAACGAGGGCTCCCTGGCGAATCTGGCTTTGGGGTGCATTATCAAAGGTCGGAGTATAGCCTCCACGCTTGATTCAGTACTAGAGTCACACAAAGAAAATGAGCTAGATGTGATCTGTCAGATAATCATGGAATGCATCCAGAGTGACCCAACGAAGAGACCAGGCATGAGGGAGATCACCACAAGGCTGAGAGAGACCATAGCCATTTCGCCGGATGCAGCAACGCCCAGATTGTCTCCGCTCTGGTGGGCTGAAGTGGAGGTCCTCTCACCAGTGGAGCCAAGGTAAAAACAATGATAAATGTGCTTCTGAAAAACCAACATCCTGCAGGATGACGATCTTGCTGTGCATACTGCTGTTCGTGCAACCTTTACCTTGTGCAACTCCCTGCCCATGTTTGATACTGCCCTTGTGCAACTCTGCTGCAAATGTCAAAGATGAGTACTTTCTGTGTGTCAAAAAAA]

[+] EMBL BI305998             [TGCGGCCCGCTCCAACATCAGAATGGTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK062165             [                                                       TTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAACTACTACCAAGAATCGAGCTCCTGTTGCTTCCTCTAGCCTCTGTCTAGTCTGAAGCCTGAACCCTTGCATGCTCCAGTTTCTGCACTGTGTGAGCAGAATTATTTCTGAAGTCTGAACAGCAGCCAAGCAAAAGAAGGCATCTGACAGTAAGATATGAACACCTGTGTTTCAGGTGAATTTGGCTGATGATTCTGCCCCTGTGTTCTGATTTATTCAAGACACTAGCAACTGAATCATCAGGTGTTGGTCGCGAATATCCCAGTGATGGATTCATCGAGTTCTTTCGTGCTCGTGGTGCTGATTCTCCAAGCTGTCGTGATCGG TTGCTCCTCACTGGACGAGCTACCCGTTCAGCTT AGCAACCGGAGGCTAC TTCAT GACAGAAATCACGCTGCTCTACTCTACAAAGATCATTTCCCAACAGTTGGAAACATGACGTTTCCAACATCTCATCAACTGCAAAATGATCCAAATTACAAGCCTCTAGATAGTTCATCCCACCCTGCCGAGGCTTCTGCAAATAAAGGATCAAGCAAAGGATTCAAGAAGTGGCTGTATATAGTTGTGATTCCAGTGGCTGGTTTGATTATGCTTGCTGGCATGGCATGGATGTTCTTGCCATGCCGCAAGAAATCCGTTGCGACTATTGGCCCTTGGAGGACTGGATCAGTGGCCAGCTGCAGAAGGCATTTGTGTCAGGAGTGCCCCAATTACAGCGTCCAGAACTGGAGCGTGCTTGTGAGGACTTCAGTAATATTGTGGCAAGTCATCCATACTACACTGTCTACAAGGGAACCTTATCATCCGGTGTTGAGATCGCCGTTGTATCGACAACGATTAAATCCAGCAAAGATTGGTCAAAGCACTGTGAAGATTGTTTCAGGAAAAAGATAGAGTCGCTCTCGCGAATAAATCATAAGAATTTCATCAATCTGCTGGGGTTTTGTGAGGAGGAAGAACCTTTCACGAGGGTGATGGTGTTCGAATACGCACCAAATGGGACGCTTTATGAGAATCTCCATGATGAGGCCTTTGATCACATCGACTGGAGAAGTAGAATGAGAATAATCATGGGAATAGCTTACTGTATTCAGCACATGCATGAGCTCAACCCTGCCAACGTGCACCCTGATCTGCATTCAAGTGCAGTATTTCTTTCTGAAGATTGTGCTGCAAAGATTGCAGACTTGAGTGTTTGGCAGGAAGTGGTTTCCGACGGCAAAAAGTCGACAGCGAATAATGATCATCATGAACCAATATCTGCTAGACTGGCAGGGAACGTTTACAGTTTTGGCATACTGCTTCTTGAAATCATCTCAGGGAAACCCCCTTACTCTGAAAACGAGGGCTCCCTGGCGAATCTGGCTTTGGGGTGCATTATCAAAGGTCGGAGTATAGCCTCCACGCTTGATTCAGTACTAGAGTCACACAAAGAAAATGAGCTAGATGTGATCTGTCAGATAATCATGGAATGCATCCAGAGTGACCCAACGAAGAGACCAGGCATGAGGGAGATCACCACAAGGCTGAGAGAGACCATAGCCATTTCGCCGGATGCAGCAACGCCCAGATTGTCTCCGCTCTGGTGGGCTGAAGTGGAGGTCCTCTCACCAGTGGAGCCAAGGTAAAAACAATGATAAATGTGCTTCTGAAAAACCAACATCCTGCAGGATGACGATCTTGCTGTGCATACTGCTGTTCGTGCAACCTTTACCTTGTGCAACTCCCTGCCCATGTTTGATACTGCCCTTGTGCAACTCTGCTGCAAATGTCAAAGATGAGTACTT                 ]
[+] EMBL OSC29151             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACCCTTGCATGCTCCAGTTTCTGCACTGTGTGAGCAGAATTATTTCTGAAGTCTGAACAGCAGCCAAGCAAAAGAAGGCATCTGACAGTAAGATATGAACACCTGTGTTTCAGGTGAATTTGGCTGATGATTCTGCCCCTGTGTTCTGATTTATTCAAGACACTAGCAACTGAATCATCAGGTGTTGGTCGCGAATATCCCAGTGATGGATTCATCGAGTTCTTTCGTGCTCGTGGTGCTGATTCTCCAAGCTGTCGTGATCGGTTTGCTCCTCACTGGACGAGCTANCCGTTCAGCTTAAGCAACCGGAGGCTACTTTCATGGACAGAAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BI813329             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GACTGCCAGGGAAC TTTACA TTTT GCATACTGCTTCTTGAAATCATCTCAGGGAAACCCCCTTACTCTGAAAACGAGGGCTCCCTGGCGAATCTGGCTTTGGGGTGCATTATCAAAGGTCGGAGTATAGCCTCCCTGCTTGATCCAGTACTAGAGTCACACAAAGAAAATGAGCTAGATGTGATCTGTCAGATAATCATGGAATGCATCCAGAGTGACCCAACGAAGAGACCAGGCATGAGGGAGATCACCACAAGGCTGAGAGAGACCATAGCCATTTCGCCGGATGCAGCAACGCCCAGATTGTCTCCGCTCTGGTGGGCTGAAGTGGAGGTCCTCTCACCAGTGGAGCCAAGGTAGAAACAATGATCAATGTGCTTCTGAAAAACCTACATCCTGCAGGATGACGATCTTGCTGTGCATACTGCTGTTCGTGC ACCTTTACCTTGTGC ACTCCCTGCCCATGTTTGATACTGCCCTTGTGCAACTCTGCTGC AATGTC AAGATGAGTACTTTCTGTGTGTCAAAAAAA]




>consensus_8202#0
TGCGGCCCGCTCCAACATCAGAATGGTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAG
CCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATC
AGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATGACCGTAGTAATTCTAGAGCTAAT
ACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGG
GCTCCGCCCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCCTCGTGCCG
GCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCA
TGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGG
CTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTA
GTGACAATAAACTACTACCAAGAATCGAGCTCCTGTTGCTTCCTCTAGCCTCTGTCTAGT
CTGAAGCCTGAACCCTTGCATGCTCCAGTTTCTGCACTGTGTGAGCAGAATTATTTCTGA
AGTCTGAACAGCAGCCAAGCAAAAGAAGGCATCTGACAGTAAGATATGAACACCTGTGTT
TCAGGTGAATTTGGCTGATGATTCTGCCCCTGTGTTCTGATTTATTCAAGACACTAGCAA
CTGAATCATCAGGTGTTGGTCGCGAATATCCCAGTGATGGATTCATCGAGTTCTTTCGTG
CTCGTGGTGCTGATTCTCCAAGCTGTCGTGATCGGTTGCTCCTCACTGGACGAGCTACCC
GTTCAGCTTAGCAACCGGAGGCTACTTCATGACAGAAATCACGCTGCTCTACTCTACAAA
GATCATTTCCCAACAGTTGGAAACATGACGTTTCCAACATCTCATCAACTGCAAAATGAT
CCAAATTACAAGCCTCTAGATAGTTCATCCCACCCTGCCGAGGCTTCTGCAAATAAAGGA
TCAAGCAAAGGATTCAAGAAGTGGCTGTATATAGTTGTGATTCCAGTGGCTGGTTTGATT
ATGCTTGCTGGCATGGCATGGATGTTCTTGCCATGCCGCAAGAAATCCGTTGCGACTATT
GGCCCTTGGAGGACTGGATCAGTGGCCAGCTGCAGAAGGCATTTGTGTCAGGAGTGCCCC
AATTACAGCGTCCAGAACTGGAGCGTGCTTGTGAGGACTTCAGTAATATTGTGGCAAGTC
ATCCATACTACACTGTCTACAAGGGAACCTTATCATCCGGTGTTGAGATCGCCGTTGTAT
CGACAACGATTAAATCCAGCAAAGATTGGTCAAAGCACTGTGAAGATTGTTTCAGGAAAA
AGATAGAGTCGCTCTCGCGAATAAATCATAAGAATTTCATCAATCTGCTGGGGTTTTGTG
AGGAGGAAGAACCTTTCACGAGGGTGATGGTGTTCGAATACGCACCAAATGGGACGCTTT
ATGAGAATCTCCATGATGAGGCCTTTGATCACATCGACTGGAGAAGTAGAATGAGAATAA
TCATGGGAATAGCTTACTGTATTCAGCACATGCATGAGCTCAACCCTGCCAACGTGCACC
CTGATCTGCATTCAAGTGCAGTATTTCTTTCTGAAGATTGTGCTGCAAAGATTGCAGACT
TGAGTGTTTGGCAGGAAGTGGTTTCCGACGGCAAAAAGTCGACAGCGAATAATGATCATC
ATGAACCAATATCTGCTAGACTGGCAGGGAACGTTTACAGTTTTGGCATACTGCTTCTTG
AAATCATCTCAGGGAAACCCCCTTACTCTGAAAACGAGGGCTCCCTGGCGAATCTGGCTT
TGGGGTGCATTATCAAAGGTCGGAGTATAGCCTCCACGCTTGATTCAGTACTAGAGTCAC
ACAAAGAAAATGAGCTAGATGTGATCTGTCAGATAATCATGGAATGCATCCAGAGTGACC
CAACGAAGAGACCAGGCATGAGGGAGATCACCACAAGGCTGAGAGAGACCATAGCCATTT
CGCCGGATGCAGCAACGCCCAGATTGTCTCCGCTCTGGTGGGCTGAAGTGGAGGTCCTCT
CACCAGTGGAGCCAAGGTAAAAACAATGATAAATGTGCTTCTGAAAAACCAACATCCTGC
AGGATGACGATCTTGCTGTGCATACTGCTGTTCGTGCAACCTTTACCTTGTGCAACTCCC
TGCCCATGTTTGATACTGCCCTTGTGCAACTCTGCTGCAAATGTCAAAGATGAGTACTTT
CTGTGTGTCAAAAAAA

consensusID : consensus_8202#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1954
fasta sequence 
                              [CCGTCTTCGTCCTCTTCCTTCTTGTTTAATAATCCCTGCATTAACTGATCAACACAACCGAGATGTTTGACAAAGAGAGAAGAATACAAGGGAATGCAGTGAACCAAGAGTTTTACCCATTCCTCCTGTATCCAGTTTAGTCGTTGCAGAAAAATCTCCCCCTTTTTTTTTTCTTTATCTGAAGATTTGCTCCTGGTTCTTCAACTACTACCAAGAATCGAGCTCCTGTTGCTTCCTCTAGCCTCTGTCTAGTCTGAAGCCTGAACCCTTGCATGCTCCAGTTTCTGCACTGTGTGAGCAGAATTATTTCTGAAGTCTGAACAGCAGCCAAGCAAAAGGTGAATTTGGCTGATGATTCTGCCCCTGTGTTCTGATTTATTCAAGACACTAGCAACTGAATCATCAGGTGTTGGTCGCGAATATCCCAGTGATGGATTCATCGAGTTCTTTCGTGCTCGTGGTGCTGATTCTCCAAGCTGTCGTGATCGGTTGCTCCTCACTGGACGAGCTACCCGTTCAGCTTAGCAACCGGAGGCTACTTCATGACAGAAATCACGCTGCTCTACTCTACAAAGATCATTTCCCAACAGTTGGAAACATGACGTTTCCAACATCTCATCAACTGCAAAATGATCCAAATTACAAGCCTCTAGATAGTTCATCCCACCCTGCCGAGGCTTCTGCAAATAAAGGATCAAGCAAAGGATTCAAGAAGTGGCTGTATATAGTTGTGATTCCAGTGGCTGGTTTGATTATGCTTGCTGGCATGGCATGGATGTTCTTGCCATGCCGCAAGAAATCCGTTGCGACTATTGGCCCTTGGAGGACTGGACTCAGTGGCCAGCTGCAGAAGGCATTTGTGTCAGGAGTGCCCCAATTACAGCGTCCAGAACTGGAGCGTGCTTGTGAGGGCTTCAGTAATATTGTGGCAAGTCATCCATACTACACTGTCTACAAGGGAACCTTATCATCCGGTGTTGAGATCGCCGTTGTATCGACAACGATTAAATCCAGCAAAGATTGGTCAAAGCACTGTGAAGATTGTTTCAGGAAAAAGATAGAGTCGCTCTCACGAATAAATCATAAGAATTTCATCAATCTGCTGGGGTTTTGTGAGGAGGAAGAACCTTTCACGAGGGTGATGGTGTTCGAATACGCACCAAATGGGACGCTTTATGAGAATCTCCATGATGAGGCCTTTGATCACATCGACTGGAGAAGTAGAATGAGAATAATCATGGGAATAGCTTACTGTATTCAGCACATGCATGAGCTCAACCCTGCCAACGTGCACCCTGATCTGCATTCAAGTGCAGTATTTCTTTCTGAAGATTGTGCTGCAAAGATTGCAGACTTGAGTGTTTGGCAGGAAGTGGTTTCCGACGGCAAAAAGTCGACAGCGAATAATGATCATCATGAACCAATATCTGCTAGACTGGCAGGGAACGTTTACAGTTTTGGCATACTGCTTCTTGAAATCATCTCAGGGAAACCCCCTTACTCTGAAAACGAGGGCTCCCTGGCGAATCTGGCTTTGGGGTGCATTATCAAAGGTCGGAGTATAGCCTCCATGCTTGATTCAGTACTAGAGTCACACAAAGAAAATGAGCTAGATGTGATCTGTCAGATAATCATGGAATGCATCCAGAGTGACCCAACGAAGAGACCAGGCATGAGGGAGATCACCACAAGGCTGAGAGAGACCATAGCCATTTCGCCGGATGCAGCAACGCCCAGATTGTCTCCGCTCTGGTGGGCTGAAGTGGAGGTCCTCTCACCAGTGGAGCCAAGGTAGAAACAATGATAAATGTGCTTCTGAAAAACCAACATCCTGCAGGATGACGATCTTGCTGTGCATACTGCTGTTCGTGCAACCTTTACCTTGTGCAACTCCCTGCCCATGTTTGATACTGCCCTTGTGCAACTCTGCTGCAAATGTCAAAGATGAGTACTT]

[+] EMBL AK065592             [CCGTCTTCGTCCTCTTCCTTCTTGTTTAATAATCCCTGCATTAACTGATCAACACAACCGAGATGTTTGACAAAGAGAGAAGAATACAAGGGAATGCAGTGAACCAAGAGTTTTACCCATTCCTCCTGTATCCAGTTTAGTCGTTGCAGAAAAATCTCCCCCTTTTTTTTTTCTTTATCTGAAGATTTGCTCCTGGTTCTTCAACTACTACCAAGAATCGAGCTCCTGTTGCTTCCTCTAGCCTCTGTCTAGTCTGAAGCCTGAACCCTTGCATGCTCCAGTTTCTGCACTGTGTGAGCAGAATTATTTCTGAAGTCTGAACAGCAGCCAAGCAAAAGGTGAATTTGGCTGATGATTCTGCCCCTGTGTTCTGATTTATTCAAGACACTAGCAACTGAATCATCAGGTGTTGGTCGCGAATATCCCAGTGATGGATTCATCGAGTTCTTTCGTGCTCGTGGTGCTGATTCTCCAAGCTGTCGTGATCGGTTGCTCCTCACTGGACGAGCTACCCGTTCAGCTTAGCAACCGGAGGCTACTTCATGACAGAAATCACGCTGCTCTACTCTACAAAGATCATTTCCCAACAGTTGGAAACATGACGTTTCCAACATCTCATCAACTGCAAAATGATCCAAATTACAAGCCTCTAGATAGTTCATCCCACCCTGCCGAGGCTTCTGCAAATAAAGGATCAAGCAAAGGATTCAAGAAGTGGCTGTATATAGTTGTGATTCCAGTGGCTGGTTTGATTATGCTTGCTGGCATGGCATGGATGTTCTTGCCATGCCGCAAGAAATCCGTTGCGACTATTGGCCCTTGGAGGACTGGACTCAGTGGCCAGCTGCAGAAGGCATTTGTGTCAGGAGTGCCCCAATTACAGCGTCCAGAACTGGAGCGTGCTTGTGAGGGCTTCAGTAATATTGTGGCAAGTCATCCATACTACACTGTCTACAAGGGAACCTTATCATCCGGTGTTGAGATCGCCGTTGTATCGACAACGATTAAATCCAGCAAAGATTGGTCAAAGCACTGTGAAGATTGTTTCAGGAAAAAGATAGAGTCGCTCTCACGAATAAATCATAAGAATTTCATCAATCTGCTGGGGTTTTGTGAGGAGGAAGAACCTTTCACGAGGGTGATGGTGTTCGAATACGCACCAAATGGGACGCTTTATGAGAATCTCCATGATGAGGCCTTTGATCACATCGACTGGAGAAGTAGAATGAGAATAATCATGGGAATAGCTTACTGTATTCAGCACATGCATGAGCTCAACCCTGCCAACGTGCACCCTGATCTGCATTCAAGTGCAGTATTTCTTTCTGAAGATTGTGCTGCAAAGATTGCAGACTTGAGTGTTTGGCAGGAAGTGGTTTCCGACGGCAAAAAGTCGACAGCGAATAATGATCATCATGAACCAATATCTGCTAGACTGGCAGGGAACGTTTACAGTTTTGGCATACTGCTTCTTGAAATCATCTCAGGGAAACCCCCTTACTCTGAAAACGAGGGCTCCCTGGCGAATCTGGCTTTGGGGTGCATTATCAAAGGTCGGAGTATAGCCTCCATGCTTGATTCAGTACTAGAGTCACACAAAGAAAATGAGCTAGATGTGATCTGTCAGATAATCATGGAATGCATCCAGAGTGACCCAACGAAGAGACCAGGCATGAGGGAGATCACCACAAGGCTGAGAGAGACCATAGCCATTTCGCCGGATGCAGCAACGCCCAGATTGTCTCCGCTCTGGTGGGCTGAAGTGGAGGTCCTCTCACCAGTGGAGCCAAGGTAGAAACAATGATAAATGTGCTTCTGAAAAACCAACATCCTGCAGGATGACGATCTTGCTGTGCATACTGCTGTTCGTGCAACCTTTACCTTGTGCAACTCCCTGCCCATGTTTGATACTGCCCTTGTGCAACTCTGCTGCAAATGTCAAAGATGAGTACTT]




>consensus_8202#1
CCGTCTTCGTCCTCTTCCTTCTTGTTTAATAATCCCTGCATTAACTGATCAACACAACCG
AGATGTTTGACAAAGAGAGAAGAATACAAGGGAATGCAGTGAACCAAGAGTTTTACCCAT
TCCTCCTGTATCCAGTTTAGTCGTTGCAGAAAAATCTCCCCCTTTTTTTTTTCTTTATCT
GAAGATTTGCTCCTGGTTCTTCAACTACTACCAAGAATCGAGCTCCTGTTGCTTCCTCTA
GCCTCTGTCTAGTCTGAAGCCTGAACCCTTGCATGCTCCAGTTTCTGCACTGTGTGAGCA
GAATTATTTCTGAAGTCTGAACAGCAGCCAAGCAAAAGGTGAATTTGGCTGATGATTCTG
CCCCTGTGTTCTGATTTATTCAAGACACTAGCAACTGAATCATCAGGTGTTGGTCGCGAA
TATCCCAGTGATGGATTCATCGAGTTCTTTCGTGCTCGTGGTGCTGATTCTCCAAGCTGT
CGTGATCGGTTGCTCCTCACTGGACGAGCTACCCGTTCAGCTTAGCAACCGGAGGCTACT
TCATGACAGAAATCACGCTGCTCTACTCTACAAAGATCATTTCCCAACAGTTGGAAACAT
GACGTTTCCAACATCTCATCAACTGCAAAATGATCCAAATTACAAGCCTCTAGATAGTTC
ATCCCACCCTGCCGAGGCTTCTGCAAATAAAGGATCAAGCAAAGGATTCAAGAAGTGGCT
GTATATAGTTGTGATTCCAGTGGCTGGTTTGATTATGCTTGCTGGCATGGCATGGATGTT
CTTGCCATGCCGCAAGAAATCCGTTGCGACTATTGGCCCTTGGAGGACTGGACTCAGTGG
CCAGCTGCAGAAGGCATTTGTGTCAGGAGTGCCCCAATTACAGCGTCCAGAACTGGAGCG
TGCTTGTGAGGGCTTCAGTAATATTGTGGCAAGTCATCCATACTACACTGTCTACAAGGG
AACCTTATCATCCGGTGTTGAGATCGCCGTTGTATCGACAACGATTAAATCCAGCAAAGA
TTGGTCAAAGCACTGTGAAGATTGTTTCAGGAAAAAGATAGAGTCGCTCTCACGAATAAA
TCATAAGAATTTCATCAATCTGCTGGGGTTTTGTGAGGAGGAAGAACCTTTCACGAGGGT
GATGGTGTTCGAATACGCACCAAATGGGACGCTTTATGAGAATCTCCATGATGAGGCCTT
TGATCACATCGACTGGAGAAGTAGAATGAGAATAATCATGGGAATAGCTTACTGTATTCA
GCACATGCATGAGCTCAACCCTGCCAACGTGCACCCTGATCTGCATTCAAGTGCAGTATT
TCTTTCTGAAGATTGTGCTGCAAAGATTGCAGACTTGAGTGTTTGGCAGGAAGTGGTTTC
CGACGGCAAAAAGTCGACAGCGAATAATGATCATCATGAACCAATATCTGCTAGACTGGC
AGGGAACGTTTACAGTTTTGGCATACTGCTTCTTGAAATCATCTCAGGGAAACCCCCTTA
CTCTGAAAACGAGGGCTCCCTGGCGAATCTGGCTTTGGGGTGCATTATCAAAGGTCGGAG
TATAGCCTCCATGCTTGATTCAGTACTAGAGTCACACAAAGAAAATGAGCTAGATGTGAT
CTGTCAGATAATCATGGAATGCATCCAGAGTGACCCAACGAAGAGACCAGGCATGAGGGA
GATCACCACAAGGCTGAGAGAGACCATAGCCATTTCGCCGGATGCAGCAACGCCCAGATT
GTCTCCGCTCTGGTGGGCTGAAGTGGAGGTCCTCTCACCAGTGGAGCCAAGGTAGAAACA
ATGATAAATGTGCTTCTGAAAAACCAACATCCTGCAGGATGACGATCTTGCTGTGCATAC
TGCTGTTCGTGCAACCTTTACCTTGTGCAACTCCCTGCCCATGTTTGATACTGCCCTTGT
GCAACTCTGCTGCAAATGTCAAAGATGAGTACTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8202#0      TGCGGCCCGCTCCAACATCAGAATGGTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAG 60
consensus_8202#1      ------------------------------------------------------------
                                                                                  

consensus_8202#0      CCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATC 120
consensus_8202#1      ------------------------------------------------------------
                                                                                  

consensus_8202#0      AGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATGACCGTAGTAATTCTAGAGCTAAT 180
consensus_8202#1      ------------------------------------------------------------
                                                                                  

consensus_8202#0      ACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGG 240
consensus_8202#1      ------------------------------------------------------------
                                                                                  

consensus_8202#0      GCTCCGCCCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCCTCGTGCCG 300
consensus_8202#1      ---------------------------------------------------------CCG 3
                                                                               ***

consensus_8202#0      GCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCA 360
consensus_8202#1      TCTTCGTCCTCTTCC--TTCTTGTTTAATAATCCCTGCATTAACTGATCAACACA-ACCG 60
                       *  **     ***   **  **    ** * *  *  **     ***     *  *** 

consensus_8202#0      TGGTGGT-GACGGGTGACGGAGAAT-TAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAAC 418
consensus_8202#1      AGATGTTTGACAAAGAGAGAAGAATACAAGGGAATGCAGTGAACCAAGAGTTTTACCCAT 120
                       * ** * ***       * *****  * **         * *    ***  * *   * 

consensus_8202#0      GGCTACCACATCCAAGGAAGGCA--GCAGG-----CGCGCAAATTACCCAATCCTGACAC 471
consensus_8202#1      TCCTCCTGTATCCAGTTTAGTCGTTGCAGAAAAATCTCCCCCTTTTTTTTTTCTTTATCT 180
                        ** *   *****    ** *   ****      * * *   **      ** * *   

consensus_8202#0      GGGGAGGTAGTGACAATA----AACTACTACCAAGAATCGAGCTCCTGTTGCTTCCTCTA 527
consensus_8202#1      GAAGATTTGCTCCTGGTTCTTCAACTACTACCAAGAATCGAGCTCCTGTTGCTTCCTCTA 240
                      *  **  *  *     *     **************************************

consensus_8202#0      GCCTCTGTCTAGTCTGAAGCCTGAACCCTTGCATGCTCCAGTTTCTGCACTGTGTGAGCA 587
consensus_8202#1      GCCTCTGTCTAGTCTGAAGCCTGAACCCTTGCATGCTCCAGTTTCTGCACTGTGTGAGCA 300
                      ************************************************************

consensus_8202#0      GAATTATTTCTGAAGTCTGAACAGCAGCCAAGCAAAAGAAGGCATCTGACAGTAAGATAT 647
consensus_8202#1      GAATTATTTCTGAAGTCTGAACAGCAGCCAAGCAAAAG---------------------- 338
                      **************************************                      

consensus_8202#0      GAACACCTGTGTTTCAGGTGAATTTGGCTGATGATTCTGCCCCTGTGTTCTGATTTATTC 707
consensus_8202#1      -----------------GTGAATTTGGCTGATGATTCTGCCCCTGTGTTCTGATTTATTC 381
                                       *******************************************

consensus_8202#0      AAGACACTAGCAACTGAATCATCAGGTGTTGGTCGCGAATATCCCAGTGATGGATTCATC 767
consensus_8202#1      AAGACACTAGCAACTGAATCATCAGGTGTTGGTCGCGAATATCCCAGTGATGGATTCATC 441
                      ************************************************************

consensus_8202#0      GAGTTCTTTCGTGCTCGTGGTGCTGATTCTCCAAGCTGTCGTGATCGGTTGCTCCTCACT 827
consensus_8202#1      GAGTTCTTTCGTGCTCGTGGTGCTGATTCTCCAAGCTGTCGTGATCGGTTGCTCCTCACT 501
                      ************************************************************

consensus_8202#0      GGACGAGCTACCCGTTCAGCTTAGCAACCGGAGGCTACTTCATGACAGAAATCACGCTGC 887
consensus_8202#1      GGACGAGCTACCCGTTCAGCTTAGCAACCGGAGGCTACTTCATGACAGAAATCACGCTGC 561
                      ************************************************************

consensus_8202#0      TCTACTCTACAAAGATCATTTCCCAACAGTTGGAAACATGACGTTTCCAACATCTCATCA 947
consensus_8202#1      TCTACTCTACAAAGATCATTTCCCAACAGTTGGAAACATGACGTTTCCAACATCTCATCA 621
                      ************************************************************

consensus_8202#0      ACTGCAAAATGATCCAAATTACAAGCCTCTAGATAGTTCATCCCACCCTGCCGAGGCTTC 1007
consensus_8202#1      ACTGCAAAATGATCCAAATTACAAGCCTCTAGATAGTTCATCCCACCCTGCCGAGGCTTC 681
                      ************************************************************

consensus_8202#0      TGCAAATAAAGGATCAAGCAAAGGATTCAAGAAGTGGCTGTATATAGTTGTGATTCCAGT 1067
consensus_8202#1      TGCAAATAAAGGATCAAGCAAAGGATTCAAGAAGTGGCTGTATATAGTTGTGATTCCAGT 741
                      ************************************************************

consensus_8202#0      GGCTGGTTTGATTATGCTTGCTGGCATGGCATGGATGTTCTTGCCATGCCGCAAGAAATC 1127
consensus_8202#1      GGCTGGTTTGATTATGCTTGCTGGCATGGCATGGATGTTCTTGCCATGCCGCAAGAAATC 801
                      ************************************************************

consensus_8202#0      CGTTGCGACTATTGGCCCTTGGAGGACTGGA-TCAGTGGCCAGCTGCAGAAGGCATTTGT 1186
consensus_8202#1      CGTTGCGACTATTGGCCCTTGGAGGACTGGACTCAGTGGCCAGCTGCAGAAGGCATTTGT 861
                      ******************************* ****************************

consensus_8202#0      GTCAGGAGTGCCCCAATTACAGCGTCCAGAACTGGAGCGTGCTTGTGAGGACTTCAGTAA 1246
consensus_8202#1      GTCAGGAGTGCCCCAATTACAGCGTCCAGAACTGGAGCGTGCTTGTGAGGGCTTCAGTAA 921
                      ************************************************** *********

consensus_8202#0      TATTGTGGCAAGTCATCCATACTACACTGTCTACAAGGGAACCTTATCATCCGGTGTTGA 1306
consensus_8202#1      TATTGTGGCAAGTCATCCATACTACACTGTCTACAAGGGAACCTTATCATCCGGTGTTGA 981
                      ************************************************************

consensus_8202#0      GATCGCCGTTGTATCGACAACGATTAAATCCAGCAAAGATTGGTCAAAGCACTGTGAAGA 1366
consensus_8202#1      GATCGCCGTTGTATCGACAACGATTAAATCCAGCAAAGATTGGTCAAAGCACTGTGAAGA 1041
                      ************************************************************

consensus_8202#0      TTGTTTCAGGAAAAAGATAGAGTCGCTCTCGCGAATAAATCATAAGAATTTCATCAATCT 1426
consensus_8202#1      TTGTTTCAGGAAAAAGATAGAGTCGCTCTCACGAATAAATCATAAGAATTTCATCAATCT 1101
                      ****************************** *****************************

consensus_8202#0      GCTGGGGTTTTGTGAGGAGGAAGAACCTTTCACGAGGGTGATGGTGTTCGAATACGCACC 1486
consensus_8202#1      GCTGGGGTTTTGTGAGGAGGAAGAACCTTTCACGAGGGTGATGGTGTTCGAATACGCACC 1161
                      ************************************************************

consensus_8202#0      AAATGGGACGCTTTATGAGAATCTCCATGATGAGGCCTTTGATCACATCGACTGGAGAAG 1546
consensus_8202#1      AAATGGGACGCTTTATGAGAATCTCCATGATGAGGCCTTTGATCACATCGACTGGAGAAG 1221
                      ************************************************************

consensus_8202#0      TAGAATGAGAATAATCATGGGAATAGCTTACTGTATTCAGCACATGCATGAGCTCAACCC 1606
consensus_8202#1      TAGAATGAGAATAATCATGGGAATAGCTTACTGTATTCAGCACATGCATGAGCTCAACCC 1281
                      ************************************************************

consensus_8202#0      TGCCAACGTGCACCCTGATCTGCATTCAAGTGCAGTATTTCTTTCTGAAGATTGTGCTGC 1666
consensus_8202#1      TGCCAACGTGCACCCTGATCTGCATTCAAGTGCAGTATTTCTTTCTGAAGATTGTGCTGC 1341
                      ************************************************************

consensus_8202#0      AAAGATTGCAGACTTGAGTGTTTGGCAGGAAGTGGTTTCCGACGGCAAAAAGTCGACAGC 1726
consensus_8202#1      AAAGATTGCAGACTTGAGTGTTTGGCAGGAAGTGGTTTCCGACGGCAAAAAGTCGACAGC 1401
                      ************************************************************

consensus_8202#0      GAATAATGATCATCATGAACCAATATCTGCTAGACTGGCAGGGAACGTTTACAGTTTTGG 1786
consensus_8202#1      GAATAATGATCATCATGAACCAATATCTGCTAGACTGGCAGGGAACGTTTACAGTTTTGG 1461
                      ************************************************************

consensus_8202#0      CATACTGCTTCTTGAAATCATCTCAGGGAAACCCCCTTACTCTGAAAACGAGGGCTCCCT 1846
consensus_8202#1      CATACTGCTTCTTGAAATCATCTCAGGGAAACCCCCTTACTCTGAAAACGAGGGCTCCCT 1521
                      ************************************************************

consensus_8202#0      GGCGAATCTGGCTTTGGGGTGCATTATCAAAGGTCGGAGTATAGCCTCCACGCTTGATTC 1906
consensus_8202#1      GGCGAATCTGGCTTTGGGGTGCATTATCAAAGGTCGGAGTATAGCCTCCATGCTTGATTC 1581
                      ************************************************** *********

consensus_8202#0      AGTACTAGAGTCACACAAAGAAAATGAGCTAGATGTGATCTGTCAGATAATCATGGAATG 1966
consensus_8202#1      AGTACTAGAGTCACACAAAGAAAATGAGCTAGATGTGATCTGTCAGATAATCATGGAATG 1641
                      ************************************************************

consensus_8202#0      CATCCAGAGTGACCCAACGAAGAGACCAGGCATGAGGGAGATCACCACAAGGCTGAGAGA 2026
consensus_8202#1      CATCCAGAGTGACCCAACGAAGAGACCAGGCATGAGGGAGATCACCACAAGGCTGAGAGA 1701
                      ************************************************************

consensus_8202#0      GACCATAGCCATTTCGCCGGATGCAGCAACGCCCAGATTGTCTCCGCTCTGGTGGGCTGA 2086
consensus_8202#1      GACCATAGCCATTTCGCCGGATGCAGCAACGCCCAGATTGTCTCCGCTCTGGTGGGCTGA 1761
                      ************************************************************

consensus_8202#0      AGTGGAGGTCCTCTCACCAGTGGAGCCAAGGTAAAAACAATGATAAATGTGCTTCTGAAA 2146
consensus_8202#1      AGTGGAGGTCCTCTCACCAGTGGAGCCAAGGTAGAAACAATGATAAATGTGCTTCTGAAA 1821
                      ********************************* **************************

consensus_8202#0      AACCAACATCCTGCAGGATGACGATCTTGCTGTGCATACTGCTGTTCGTGCAACCTTTAC 2206
consensus_8202#1      AACCAACATCCTGCAGGATGACGATCTTGCTGTGCATACTGCTGTTCGTGCAACCTTTAC 1881
                      ************************************************************

consensus_8202#0      CTTGTGCAACTCCCTGCCCATGTTTGATACTGCCCTTGTGCAACTCTGCTGCAAATGTCA 2266
consensus_8202#1      CTTGTGCAACTCCCTGCCCATGTTTGATACTGCCCTTGTGCAACTCTGCTGCAAATGTCA 1941
                      ************************************************************

consensus_8202#0      AAGATGAGTACTTTCTGTGTGTCAAAAAAA 2296
consensus_8202#1      AAGATGAGTACTT----------------- 1954
                      *************


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)