These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8214#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1340 fasta sequence [TCTTTTTTTTTTTGGAAATCATTTACATTATTTAAAAAAAAACCTTTTGTCCGTGGAGATAATTCGATACTAGTAAAAAGGAAGAGGAAAAAATCTAGCGAATTGGAGGAGGACATCGAGCATAGTAGAATCGCACCGCCGTGTCGTCAGGCCGCGGGCGCCTCGGCGTGGCCGTCGGCCGCCGCGGCGCCGGCGCCGGCGCCGTAGCGGCGGACGCGCTCGTCGATCCAGGCGCGCATGTCGGCGAGCACGCGGTCGCGGTTCTCGTCGGACTCCCCCTGGATGAGCGAGTGGTACATCCCGTCGTAGAGGATGAGGCTCTTGTCCTCGCTCGCCGCGCGCTCGTACAGCATCCTGGACCCCTCCGGCGAGGTCACCCCGTCGTCGGTGCCGTGCACCACCAGGAACGGCGCCGCCACCTCCCCGAAGCTCTCCCGCAGCAGCGCCGTCACGCGTGCGAGCTCCCGCATCGTCCCCACCCGCGGCGAGCCGCGGTACAGCCGCGGGTTGGACGCGATCACCCTCAGCTTCGCCGGGTCGCGGATCGATCTCCCCACCATCCTCTTGTCCGGCATCACCGCCCATGTGTCGGCTAGGCCGAAGAGGAGGCCGTACAGGAAGAGCCGCACGCGGGACGGGTACATGTCGTCGGGGAAGACGAGCAGCGGCGCCGACAGGATGATCCCCGCCCACCCGGCGTCGGGCGGGGAGCGGAGGTAGGCGAGCAGGGTGGTGGCGCCGCCCATGGACTCGCCGAAGAGGAACGCCGGGAGGGAGGCGTAGGCGCCGCTCCGCCGCACGGAGAGGAAGAAGGAGAGCGCCGCCCTCGCGACGGCCTCCGTGTCGCCGAGGTAGCCGCGGACGCCGTCGGAGCGGCCGTGTCCGAGCAGGTCGGCGCAGAAGACGGCGTACCCCCACCGCGCGTAGCTGATGGCGATGTTCTGGAACATCCACGAGGAGTCGGAGCCGTAGCCGTGGCTCATGAAGACGACGCCCTTGACGTCGCCGTCGCTGGCGGCGGAGAGCGGGTGGAACGAGTGCGTGAAGAGGCGGCCGCAGGGGGACTGGAAGTAGGCCTCGGCGTGGCGGAGACCCAGCGAGGCGTAGTACTCGTCGGGCTCCGGGGAGTCGCCCCAGAAGTACTTCGTCGCCGTCGGTGGCGGCGGTGGCGGCGCCATCGCCGGAGACGGAGACGGCAGCACGCGAGACGGCGAGAAGATATTTTTTTTCTCCTTTATTTTTCGTTGACGAAAGCCAGCAGAAATGGAAGATGGGTGAGCAGTGAGCTCATTTATTGTACAAAGGAAAGGAAAAAAAGGGTTGCTTCCTCTATTTAAATT] [+] EMBL CB645658 [TCTTTTTTTTTTTGGAAATCATTTACATTATTTAAAAAAAAACCTTTTGTCCGTGGAGATAATTCGATACTAGTAAAAAGGAAGAGGAAAAAATCTAGCGAATTGGAGGAGGACATCGAGCATAGTAGAATCGCACCGCCGTGTCGTCAGGCCGCGGGCGCCTCGGCGTGGCCGTCGGCCGCCGCGGCGCCGGCGCCGGCGCCGTAGCGGCGGACGCGCTCGTCGATCCAGGCGCGCATGTCGGCGAGCACGCGGTCGCGGTTCTCGTCGGACTCCCCCTGGATGAGCGAGTGGTACATCCCGTCGTAGAGGATGAGGCTCTTGTCCTCGCTCGCCGCGCGCTCGTACAGCATCCTGGACCCCTCCGGCGAGGTCACCCCGTCGTCGGTGCCGTGCACCACCAGGAACGGCGCCGCCACCTCCCCGAAGCTCTCCCGCAGCAGCGCCGTCACGCGTGCGAGCTCCCGCATCGTCCCCACCCGCGGCGAGCCGCGGTACAGCCGCGGGTTGGACGCGATCACCCTCAGCTTCGCCGGGTCGCGGATCGATCTCCCCACCATCCTCTTGTCCGGCATCACCGCCCATGTGTCGGCTAGGCCGAAGAGGAGGCCGTACAGGAAGAGCCGCACGCGGGACGGGTACATGTCGTCGGGGAAGACGAGCAGCGGCGCCGACAGGAT ] [+] EMBL CB645123 [ TTACATTATTTAAAAAAAAAACATTTGTCCGTGGAGATAATTCGATACTAGTAAAAAGGAAGAGGAAAAAATCTAGCGAATTGGAGGAGGACATCGAGCATAGTAGAATCGCACCGCCGTGTCGTCAGGCCGCGGGCGCCTCGGCGTGGCCGTCGGCCGCCGCGGCGCCGGCGCCGGCGCCGTAGCGGCGGACGCGCTCGTCGATCCAGGCGCGCATGTCGGCGAGCACGCGGTCGCGGTTCTCGTCGGACTCCCCCTGGATGAGCGAGTGGTACATCCCGTCGTAGAGGATGAGGCTCTTGTCCTCGCTCGCCGCGCGCTCGTACAGCATCCTGGACCCCTCCGGCGAGGTCACCCCGTCGTCGGTGCCGTGCACCACCAGGAACGGCGCCGCCACCTCCCCGAAGCTCTCCCGCAGCAGCGCCGTCACGCGTGCGAGCTCCCGCATCGTCCCCACCCGCGGCGAGCCGCGGTACAGCCGCGGGTTGGACGCGATCACCCTCAGCTTCGCCGGGTCGCGGATCGATCTCCCCACCATCCTCTTGTCCGGCATCACCGCCCATGTGTCGGCTAGGCCGAAGAGGAGGCCGTACAGGAAGAGCCGCACGCGGGACGGGTACATGTCGTCGGGGAAGACGAGCAGCGGCGCCGACAGGATGATCCCCGCC ] [+] EMBL AK111370 [ AGTAGAATCGCACCGCCGTGTCGTCAGGCCGCGGGCGCCTCGGCGTGGCCGTCGGCCGCCGCGGCGCCGGCGCCGGCGCCGTAGCGGCGGACGCGCTCGTCGATCCAGGCGCGCATGTCGGCGAGCACGCGGTCGCGGTTCTCGTCGGACTCCCCCTGGATGAGCGAGTGGTACATCCCGTCGTAGAGGATGAGGCTCTTGTCCTCGCTCGCCGCGCGCTCGTACAGCATCCTGGACCCCTCCGGCGAGGTCACCCCGTCGTCGGTGCCGTGCACCACCAGGAACGGCGCCGCCACCTCCCCGAAGCTCTCCCGCAGCAGCGCCGTCACGCGTGCGAGCTCCCGCATCGTCCCCACCCGCGGCGAGCCGCGGTACAGCCGCGGGTTGGACGCGATCACCCTCAGCTTCGCCGGGTCGCGGATCGATCTCCCCACCATCCTCTTGTCCGGCATCACCGCCCATGTGTCGGCTAGGCCGAAGAGGAGGCCGTACAGGAAGAGCCGCACGCGGGACGGGTACATGTCGTCGGGGAAGACGAGCAGCGGCGCCGACAGGATGATCCCCGCCCACCCGGCGTCGGGCGGGGAGCGGAGGTAGGCGAGCAGGGTGGTGGCGCCGCCCATGGACTCGCCGAAGAGGAACGCCGGGAGGGAGGCGTAGGCGCCGCTCCGCCGCACGGAGAGGAAGAAGGAGAGCGCCGCCCTCGCGACGGCCTCCGTGTCGCCGAGGTAGCCGCGGACGCCGTCGGAGCGGCCGTGTCCGAGCAGGTCGGCGCAGAAGACGGCGTACCCCCACCGCGCGTAGCTGATGGCGATGTTCTGGAACATCCACGAGGAGTCGGAGCCGTAGCCGTGGCTCATGAAGACGACGCCCTTGACGTCGCCGTCGCTGGCGGCGGAGAGCGGGTGGAACGAGTGCGTGAAGAGGCGGCCGCAGGGGGACTGGAAGTAGGCCTCGGCGTGGCGGAGACCCAGCGAGGCGTAGTACTCGTCGGGCTCCGGGGAGTCGCCCCAGAAGTACTTCGTCGCCGTCGGTGGCGGCGGTGGCGGCGCCATCGCCGGAGACGGAGACGGCAGCACGCGAGACGGCGAGAAGATATTTTTTTTCTCCTTTATTTTTCGTTGACGAAAGCCAGCAGAAATGGAAGATGGGTGAGCAGTGAGCTCATTTATTGTACAAAGGAAAGGAAAAAAAGGGTTGCTTCCTCTATTTAAATT] [-] EMBL CB645122 [ GTCACGCGTGCGAGCTCCCGCATCGTCCCCACCCGCGGCGAGCCGCGGTACAGCCGCGGGTGNGACGCGATCACCCTCAGCTTCGCCGGGTCGCGGATCGATCTCCCCACCATCCTCTTGTCCGGCATCACCGCCCATGTGTCGGCTAGGCCGAAGAGGAGGCCGTACAGGAAGAGCCGCACGCGGGACGGGTACATGTCGTCGGGGAAGACGAGCAGCGGCGCCGACAGGATGATCCCCGCCCACCCGGCGTCGGGCGGGGAGCGGAGGTAGGCGAGCAGGGTGGTGGCGCCGCCCATGGACTCGCCGAAGAGGAACGCCGGGAGGGAGGCGTAGGCGCCGCTCCGCCGCACGGAGAGGAAGAAGGAGAGCGCCGCCCTCGCGACGGCCTCCGTGTCGCCGAGGTAGCCGCGGACGCCGTCGGAGCGGCCGTGTCCGAGCAGGTCGGCGCAGAAGACGGCGTACCCCCACCGCGCGTAGCTGATGGCGATGTTCTGGAACATCCACGAGGAGTCGGAGCCGTAGCCGTGGCTCATGAAGACGACGCCCTTGACGTCGCCGTCGCTGGCGGCGGAGAGCGGGTGGAACGAGTGCGTGAAGAGGCGGCCGCAGGGGGACTGGAAGTAGGCCTCGGCGTGGCGGAGACCCAGCGAGGCGTAGTACTCGTCGGGCTCCGGGGAGTCGCCCCAGAAGTACTTCGTCGCCGTCGGTGGCGGCGGTGGCGGCGCCATCGCCGGAGACGGAGACGGCAGCACGCGAGACGGCGAGAAGATATTTTTTTTCTCCTTTATTTTTCG ] [-] EMBL CB645657 [ GCCGCACGCGGGACGGGTACATGTCGTCGGGGAAGACGAGCAGCGGCGCCGACAGGATGATCNCCGCCCACCCGGCGTCGGGCGGGGAGCGGAGGTAGGCGAGCAGGGTGGTGGCGCCGCCCATGGACTCGCCGAAGAGGAACGCCGGGAGGGAGGCGTAGGCGCCGCTCCGCCGCACGGAGAGGAAGAAGGAGAGCGCCGCCCTCGCGACGGCCTCCGTGTCGCCGAGGTAGCCGCGGACGCCGTCGGAGCGGCCGTGTCCGAGCAGGTCGGCGCAGAAGACGGCGTACCCCCACCGCGCGTAGCTGATGGCGATGTTCTGGAACATCCACGAGGAGTCGGAGCCGTAGCCGTGGCTCATGAAGACGACGCCCTTGACGTCGCCGTCGCTGGCGGCGGAGAGCGGGTGGAACGAGTGCGTGAAGAGGCGGCCGCAGGGGGACTGGAAGTAGGCCTCGGCGTGGCGGAGACCCAGCGAGGCGTAGTACTCGTCGGGCTCCGGGGAGTCGCCCCAGAAGTACTTCGTCGCCGTCGGTGGCGGCGGTGGCGGCGCCATCGCCGGAGACGGAGACGGCAGCACGCGAGACGGCGAGAAGATATTTTTTTTCTCCTAAAGTTTTCG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||