These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8226#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1568 fasta sequence [TCACACACCTAGCTAGCAAGTAGGCTCTCTCACTCCACACCCACACTACTCCTCCCAGGCTGCCTGCCTAAAAGGCTAGACCTATCCATCTCTTCCCCCCACTCCTCCAGCATCGCCATCATCCACTGTTCATCCACTCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATCGATCCCTGCAGGTTCTTGCTGCTGCTGCTGCTGCCTTGCTTGCTGTCAAGCATGGCTTGACCACCTGAGAGCGAGGAGAGCATAGCGTAGTACTTGGCTAGCTGCTGTTCAATTCCTCATGGATGATTGGAGGATCGCTAGCTAGGTCGCCCGGATCCACGGACACCTCTCCTCGTCTCGTGCTCGTGCATGCCAAGATCGATCGATCCCAGCTGCTGCTGCGAGTGGAGCAGTGGAGGAGGAGATCGGCTGCTACCTGACCTAGATCGGGAAGCAGATTCATCCGGTTGCATTACGGCGGCGAGGCGAGGGCGAGGATGGATCGTCACCATCACCACCACCACCACCACCACCATCACATGATGTCGGGCGGCGGGCAAGACCCGGCGGCGGGGGACGGCGGCGCCGGCGGCGCCACGCAGGACAGCTTCTTCCTCGGCCCGGCCGCGGCCGCCATGTTCTCCGGCGCCGGGTCGTCGTCGTCGGGCGCGGGGACGTCGGCGGGAGGCGGCGGCGGCGGGCCATCGCCGTCCAGCTCGTCGCCGTCGCTGAGCCGGTACGAGTCGCAGAAGCGGCGGGACTGGAACACGTTCGGGCAGTACCTGCGGAACCACCGGCCGCCGCTGTCCCTGTCGCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTCAAGTACATGGACCAGTTCGGGAAGACGAAGGTGCACACGCCGGTGTGCCCCTTCTACGGCCACCCCAACCCGCCGGCGCCATGCCCGTGCCCGCTCCGCCAAGCCTGGGGCTCCCTCGACGCGCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGAACGGCGGCACGCCGGAGATGAACCCCTTCGGCGCCCGCGCCGTCCGCCTCTACCTGCGCGAGGTGCGCGAGACGCAGGCCAGGGCGAGGGGGATCAGCTACGAGAAGAAGAAGCGCAAGAAGCCCTCGTCCGCCGGCGCCGGAGCCGGGCCCTCGTCCGAGGGGAGCCCGCCGCCACCCGGCGGCTCGGCCAGCGGCGGCGGCGACACGTCGGCGTCGCCGCAGTTCATCATCCCGTGAGTTCTTCTCGATCCCCATCGCCATCTCCGCATCTCCATTGATCGATCGAGCCTCGCAGCAAGAAATTCCAATCTCCTTGGCAGAAATGCCATCTTGCTTTGCCAGTACAAGGCATCATATCTCTTCTTTCCTCCTGAATTGGTTTCGATCTCTCCCATTTTGCAAAAAAAAGATTTCTCCTCTTTTTAATTTCATCTCTGTCTCGCTTTCTAAGCTAGGACGAAGGTCATGCATGAGTGATTTCAATTGGTAGCTTAATTAAGACAGAAACAACATGTGTTATGTGTACTTGTCCTGGGAACAGATTCCATATATATGCCAAATGCTTT] [+] EMBL AK111446 [TCACACACCTAGCTAGCAAGTAGGCTCTCTCACTCCACACCCACACTACTCCTCCCAGGCTGCCTGCCTAAAAGGCTAGACCTATCCATCTCTTCCCCCCACTCCTCCAGCATCGCCATCATCCACTGTTCATCCACTCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATCGATCCCTGCAGGTTCTTGCTGCTGCTGCTGCTGCCTTGCTTGCTGTCAAGCATGGCTTGACCACCTGAGAGCGAGGAGAGCATAGCGTAGTACTTGGCTAGCTGCTGTTCAATTCCTCATGGATGATTGGAGGATCGCTAGCTAGGTCGCCCGGATCCACGGACACCTCTCCTCGTCTCGTGCTCGTGCATGCCAAGATCGATCGATCCCAGCTGCTGCTGCGAGTGGAGCAGTGGAGGAGGAGATCGGCTGCTACCTGACCTAGATCGGGAAGCAGATTCATCCGGTTGCATTACGGCGGCGAGGCGAGGGCGAGGATGGATCGTCACCATCACCACCACCACCACCACCACCATCACATGATGTCGGGCGGCGGGCAAGACCCGGCGGCGGGGGACGGCGGCGCCGGCGGCGCCACGCAGGACAGCTTCTTCCTCGGCCCGGCCGCGGCCGCCATGTTCTCCGGCGCCGGGTCGTCGTCGTCGGGCGCGGGGACGTCGGCGGGAGGCGGCGGCGGCGGGCCATCGCCGTCCAGCTCGTCGCCGTCGCTGAGCCGGTACGAGTCGCAGAAGCGGCGGGACTGGAACACGTTCGGGCAGTACCTGCGGAACCACCGGCCGCCGCTGTCCCTGTCGCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTCAAGTACATGGACCAGTTCGGGAAGACGAAGGTGCACACGCCGGTGTGCCCCTTCTACGGCCACCCCAACCCGCCGGCGCCATGCCCGTGCCCGCTCCGCCAAGCCTGGGGCTCCCTCGACGCGCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGAACGGCGGCACGCCGGAGATGAACCCCTTCGGCGCCCGCGCCGTCCGCCTCTACCTGCGCGAGGTGCGCGAGACGCAGGCCAGGGCGAGGGGGATCAGCTACGAGAAGAAGAAGCGCAAGAAGCCCTCGTCCGCCGGCGCCGGAGCCGGGCCCTCGTCCGAGGGGAGCCCGCCGCCACCCGGCGGCTCGGCCAGCGGCGGCGGCGACACGTCGGCGTCGCCGCAGTTCATCATCCCGTGAGTTCTTCTCGATCCCCATCGCCATCTCCGCATCTCCATTGATCGATCGAGCCTCGCAGCAAGAAATTCCAATCTCCTTGGCAGAAATGCCATCTTGCTTTGCCAGTACAAGGCATCATATCTCTTCTTTCCTCCTGAATTGGTTTCGATCTCTCCCATTTTGCAAAAAAAAGATTTCTCCTCTTTTTAATTTCATCTCTGTCTCGCTTTCTAAGCTAGGACGAAGGTCATGCATGAGTGATTTCAATTGGTAGCTTAATTAAGACAGAAACAACATGTGTTATGTGTACTTGTCCTGGGAACAGATTCCATATATATGCCAAATGCTTT] consensusID : consensus_8226#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1434 fasta sequence [GTTTCTTGTGTTGATCTGAGTTTGATTTGATTTTCAGTTTTGCACCATGCGATCGATCGAGAGTGTGTTGTTGTTCTTGTTTTGGTTCTTTTCTAGTAGTATCAGTTGCACTGATTAATTAATTAATATAGCTTGTGTTTTGATTCGGTAGACACGGCTATCTGCAGCGTATCAAAGCTTTTCCTGTTGCACACCACACCTACCATGAGTTCCTTTCAATCAATGCCTCTCTCTCTCTCTCTCGATCTGCAGATCAAATATACAATTCGCCTTCTCGATCGAGTAGTTGATGAACAGTGTTCCCCTTGATTGATTGATCACCATTATTATAACATCCTCTTTCTTTCTTCTCACTGTACCACACACTTCGATCTCTGCAGCCTGAACCAAGCAAGAATTATAGTATTAGAACAACTCCAGATATCTCTAAAGCTGATGATCTAGCTCTACTTTCTGCATCGATCGATCTCGTTAATTAGGGTTAGATCACCGGCCGGCACAGTGCATCTTCAAATAAGCATCATTTGCTCTTTGAGTGATACAGTACTATGCTTCCCCTTCTGCTGATCTGCTCTCTCTGTCCCTGCATGTATTACAGTTAATTTGTGTCAGTTCTTGCTTGGCTGAGCTAAGTTCACGCCAGATCTTCAAAACCCCAATCTTGCTACTGTGTTTTGTTTTTCTTGGACCACCCAGTTATCTGCCTTTTTTTATTTTTTTCCAAATCTCACAAAGCTTTGCACGTCAAACATATTAGAAGAAGCATTGAGATAACTTCCAGATTAGCTGAAACCCTAGTTCTTTCTCATTCTGAATCATCCACAGTATGTCAAATTCTCAATAGCATTAGCTGCTTGGTTTGACCATTGGTCATGGGGTTGACGAACTGACACGCAGCAATTAATGGTTCATGTTTGGCAGGTGAGAGATTGAGGAGATGGACATGATCGGCATGGCGTCGCCGGCGGAAAGCCCCGGCGGCGGCGGCACGGCCAGGCCGAGCAGGTACGAGTCGCAGAAGCGGCGGGACTGGCAGACGTTCGGGCAGTATCTGCGCAACCACCGGCCGCCGCTGGAGCTCTCCCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTCCGGTACCTGGACCAGTTCGGGAAGACGAAGGTGCACGCCCATGGCTGCCCCTTCTTCGGCCACCCCTCGCCGCCGGCGCCGTGCCCCTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCCCTCGTCGGCCGCCTCCGCGCCGCCTTCGAGGAGCACGGCGGCCGCCCTGAGTCCAACCCCTTCGGCGCCCGCGCCGTCCGCCTCTACCTCCGCGACATCCGCGACACGCAGTCCAAGGCCCGCGGCATCGCCTACGAGAAGAAGCGCCGCAAGCGCGCCGCCGCCTCCCACACCAAGCAGAAGCAGCAGCAGCA] [+] EMBL AK106854 [GTTTCTTGTGTTGATCTGAGTTTGATTTGATTTTCAGTTTTGCACCATGCGATCGATCGAGAGTGTGTTGTTGTTCTTGTTTTGGTTCTTTTCTAGTAGTATCAGTTGCACTGATTAATTAATTAATATAGCTTGTGTTTTGATTCGGTAGACACGGCTATCTGCAGCGTATCAAAGCTTTTCCTGTTGCACACCACACCTACCATGAGTTCCTTTCAATCAATGCCTCTCTCTCTCTCTCTCGATCTGCAGATCAAATATACAATTCGCCTTCTCGATCGAGTAGTTGATGAACAGTGTTCCCCTTGATTGATTGATCACCATTATTATAACATCCTCTTTCTTTCTTCTCACTGTACCACACACTTCGATCTCTGCAGCCTGAACCAAGCAAGAATTATAGTATTAGAACAACTCCAGATATCTCTAAAGCTGATGATCTAGCTCTACTTTCTGCATCGATCGATCTCGTTAATTAGGGTTAGATCACCGGCCGGCACAGTGCATCTTCAAATAAGCATCATTTGCTCTTTGAGTGATACAGTACTATGCTTCCCCTTCTGCTGATCTGCTCTCTCTGTCCCTGCATGTATTACAGTTAATTTGTGTCAGTTCTTGCTTGGCTGAGCTAAGTTCACGCCAGATCTTCAAAACCCCAATCTTGCTACTGTGTTTTGTTTTTCTTGGACCACCCAGTTATCTGCCTTTTTTTATTTTTTTCCAAATCTCACAAAGCTTTGCACGTCAAACATATTAGAAGAAGCATTGAGATAACTTCCAGATTAGCTGAAACCCTAGTTCTTTCTCATTCTGAATCATCCACAGTATGTCAAATTCTCAATAGCATTAGCTGCTTGGTTTGACCATTGGTCATGGGGTTGACGAACTGACACGCAGCAATTAATGGTTCATGTTTGGCAGGTGAGAGATTGAGGAGATGGACATGATCGGCATGGCGTCGCCGGCGGAAAGCCCCGGCGGCGGCGGCACGGCCAGGCCGAGCAGGTACGAGTCGCAGAAGCGGCGGGACTGGCAGACGTTCGGGCAGTATCTGCGCAACCACCGGCCGCCGCTGGAGCTCTCCCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTCCGGTACCTGGACCAGTTCGGGAAGACGAAGGTGCACGCCCATGGCTGCCCCTTCTTCGGCCACCCCTCGCCGCCGGCGCCGTGCCCCTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCCCTCGTCGGCCGCCTCCGCGCCGCCTTCGAGGAGCACGGCGGCCGCCCTGAGTCCAACCCCTTCGGCGCCCGCGCCGTCCGCCTCTACCTCCGCGACATCCGCGACACGCAGTCCAAGGCCCGCGGCATCGCCTACGAGAAGAAGCGCCGCAAGCGCGCCGCCGCCTCCCACACCAAGCAGAAGCAGCAGCAGCA] consensusID : consensus_8226#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1217 fasta sequence [CACACACTCCGTCCCAACAAGCTACTCTTCTTCTTCTTCTACCTCCTCACCCCTACCCATTCTCTCTCTCTCTCTCTCTCTAGCTAGCTAGAGCAGCAACCAACCATGGAGCCTTCCCCCGACGCGCCACGCGCCGGGGCAGCGGAAGAGCAGCCTGGTCCGTCCTCCTCGGCGTCGGCGCCGGCGCCCGCGGCGTCGTCGAACGAAGAAGAAGGGAGACATCAGTCGCAGGCGCAGCAGCAGGTGCAAGAAGCGCAGCCGCAGCCGCTGGCGCAGCAGGCGCCGGCGGCGGCGGGGCTGAGCAGGTACGAGTCGCAGAAGCGGCGGGACTGGAACACGTTCCTGCAGTACCTGCGGAACCACAAGCCGCCGCTGACGCTGCCGCGGTGCAGCGGCGCGCACGTCATCGAGTTCCTCAAGTACCTGGACCAGTTCGGGAAGACCAAGGTGCACGCCGACGGGTGCGCCTACTTCGGCGAGCCCAACCCGCCGGCGCCGTGCGCCTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCGCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGTCCGGCGGCCGCCCGGAGTCCAACCCCTTCGCCGCCCGCGCCGTCCGCATCTACCTCCGCGAGGTCCGCGAGGCGCAGGCCAAGGCGCGTGGGATCCCCTACGAGAAGAAGCGCAAGCGTGGCGCCGCCGCCGCCGCCGCCGCCCCTCCCGTCGTCGTCGCGCCGCCCCCCGTCGTCACCGCGCCCGACGACGCCACCGGGACGTCGGGAGGCGCCGGCGAGGACGACGACGACGACGAGGCCACCCACTCCGGCGAGCAGCAGGACACCACGCCGGCGGCCTCTCCTACTACTCCTCCGGCAACAAGTGTCGGTACTACCACCGCGGCGGCGACTGCGGCGGCGGCGAAGGGAAGTGCGGCGAAAGGATCGGCGACGAGTTCGTGATAAGTGTAGAGAAATCATTTGCCTCCCTTTCAATCCCCTCATCACCCTCCAAATTCTAATCCCCTGCAGCATCATCATCATCATCTTAATTTTTAGTGGTTGATTAATTATTATGATTATTACTGTTATTATTTGTTGGTATGAGAGTGGAGAGGCCTAATTAAGGGGGTTTGTAGGATAATGTTAGGATCGAGTACATAAAAGGCTGCTAAATTAACATGCAGAAAATTTCAATTTGAAGAAATAAGAGGAAGACA] [+] EMBL AK106384 [CACACACTCCGTCCCAACAAGCTACTCTTCTTCTTCTTCTACCTCCTCACCCCTACCCATTCTCTCTCTCTCTCTCTCTCTAGCTAGCTAGAGCAGCAACCAACCATGGAGCCTTCCCCCGACGCGCCACGCGCCGGGGCAGCGGAAGAGCAGCCTGGTCCGTCCTCCTCGGCGTCGGCGCCGGCGCCCGCGGCGTCGTCGAACGAAGAAGAAGGGAGACATCAGTCGCAGGCGCAGCAGCAGGTGCAAGAAGCGCAGCCGCAGCCGCTGGCGCAGCAGGCGCCGGCGGCGGCGGGGCTGAGCAGGTACGAGTCGCAGAAGCGGCGGGACTGGAACACGTTCCTGCAGTACCTGCGGAACCACAAGCCGCCGCTGACGCTGCCGCGGTGCAGCGGCGCGCACGTCATCGAGTTCCTCAAGTACCTGGACCAGTTCGGGAAGACCAAGGTGCACGCCGACGGGTGCGCCTACTTCGGCGAGCCCAACCCGCCGGCGCCGTGCGCCTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCGCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGTCCGGCGGCCGCCCGGAGTCCAACCCCTTCGCCGCCCGCGCCGTCCGCATCTACCTCCGCGAGGTCCGCGAGGCGCAGGCCAAGGCGCGTGGGATCCCCTACGAGAAGAAGCGCAAGCGTGGCGCCGCCGCCGCCGCCGCCGCCCCTCCCGTCGTCGTCGCGCCGCCCCCCGTCGTCACCGCGCCCGACGACGCCACCGGGACGTCGGGAGGCGCCGGCGAGGACGACGACGACGACGAGGCCACCCACTCCGGCGAGCAGCAGGACACCACGCCGGCGGCCTCTCCTACTACTCCTCCGGCAACAAGTGTCGGTACTACCACCGCGGCGGCGACTGCGGCGGCGGCGAAGGGAAGTGCGGCGAAAGGATCGGCGACGAGTTCGTGATAAGTGTAGAGAAATCATTTGCCTCCCTTTCAATCCCCTCATCACCCTCCAAATTCTAATCCCCTGCAGCATCATCATCATCATCTTAATTTTTAGTGGTTGATTAATTATTATGATTATTACTGTTATTATTTGTTGGTATGAGAGTGGAGAGGCCTAATTAAGGGGGTTTGTAGGATAATGTTAGGATCGAGTACATAAAAGGCTGCTAAATTAACATGCAGAAAATTTCAATTTGAAGAAATAAGAGGAAGACA] consensusID : consensus_8226#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1206 fasta sequence [TAGTACCTCCGAGCTAAGCCACTCCACCGCCGATTGATCGCGTCACGGCGGCGCAGCCCGGCCGCCAGCGTCGTCCGTCCGATCGGCAGATCTGAGGAGGGAGAAAGGTTTGCTGCTGCTTGTGCTAGGACGTCATGCAGGGAGGCGGCGGCGGGGATAGCTCCGGCGGCGGCGGCGGCGAGGCGCCGCGGCCGAGCAGGTACGAGTCGCAGAAGCGGCGGGACTGGCACACGTTCGGGCAGTACCTGCGCAACCACCGGCCGCCGCTGGAGCTGTCGCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTCCGGTACCTGGACCAGTTCGGGAAGACGAAGGTGCACGCCGCGGGGTGCCCCTTCTTCGGCCACCCCTCGCCGCCGGCGCCGTGCCCGTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCGCTCGTCGGCCGCCTCCGCGCCGCCTTCGAGGAGCACGGCGGCCGCCCCGAGGCCAACCCCTTCGGCGCCCGCGCCGTCCGCCTCTACCTCCGCGAGGTCCGCGACAGCCAGGCCAAGGCCCGCGGCATCGCCTACGAGAAGAAGCGCCGCAAGCGCCCGCCCACCTCCTCGTCTTCGTCTCAGGCCGCCGCCGCCGCCGCCGCCGCCACCTCCCCGGCGAGCCCAGCCGCTAGCCCGACGCCGCCACCGCCACCGCCGACGGAGAGATCAGCCGACGTGCGGCCGATGCCACCGGAGGGCCACTTCTTCATCCCGCACCCACACTTCATGCACGGACACTTCCTCGTACCGGGCGGCGACGCCGACCACCACCACCAGGTCTCCAACGCCGGCAATGGCGGCAACACCAACACCAACACCAACACCAACACCGGCGGCGGCGGCGGCAACGGCGACGAGATGGCGGTGGCGATGGCGGCGGTGGCGGAGGCGCACGCGGCGGGGTGCATGCTGCCGCTGTCCGTGTTTAACTAGCAGTAATATTCAGAGATCAGCAGCATATAGCAAAAATCAAGGTAGGGCTTAATCAAATCCGGGGGAGGGTTTTAATTAATGGATTACTCCAACCTTAGTTCGTTAAAACCGATCGATCGATCGATGGATCGATGCGTCTCATCATGATGGAATGATGGATTCGATTGGATTCGATTCGATCGAGCTATCAACGTAGCGCTACTGTGTATGTACTGTTTGTGTTCTTATCAAACTCTAC] [+] EMBL AK068794 [TAGTACCTCCGAGCTAAGCCACTCCACCGCCGATTGATCGCGTCACGGCGGCGCAGCCCGGCCGCCAGCGTCGTCCGTCCGATCGGCAGATCTGAGGAGGGAGAAAGGTTTGCTGCTGCTTGTGCTAGGACGTCATGCAGGGAGGCGGCGGCGGGGATAGCTCCGGCGGCGGCGGCGGCGAGGCGCCGCGGCCGAGCAGGTACGAGTCGCAGAAGCGGCGGGACTGGCACACGTTCGGGCAGTACCTGCGCAACCACCGGCCGCCGCTGGAGCTGTCGCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTCCGGTACCTGGACCAGTTCGGGAAGACGAAGGTGCACGCCGCGGGGTGCCCCTTCTTCGGCCACCCCTCGCCGCCGGCGCCGTGCCCGTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCGCTCGTCGGCCGCCTCCGCGCCGCCTTCGAGGAGCACGGCGGCCGCCCCGAGGCCAACCCCTTCGGCGCCCGCGCCGTCCGCCTCTACCTCCGCGAGGTCCGCGACAGCCAGGCCAAGGCCCGCGGCATCGCCTACGAGAAGAAGCGCCGCAAGCGCCCGCCCACCTCCTCGTCTTCGTCTCAGGCCGCCGCCGCCGCCGCCGCCGCCACCTCCCCGGCGAGCCCAGCCGCTAGCCCGACGCCGCCACCGCCACCGCCGACGGAGAGATCAGCCGACGTGCGGCCGATGCCACCGGAGGGCCACTTCTTCATCCCGCACCCACACTTCATGCACGGACACTTCCTCGTACCGGGCGGCGACGCCGACCACCACCACCAGGTCTCCAACGCCGGCAATGGCGGCAACACCAACACCAACACCAACACCAACACCGGCGGCGGCGGCGGCAACGGCGACGAGATGGCGGTGGCGATGGCGGCGGTGGCGGAGGCGCACGCGGCGGGGTGCATGCTGCCGCTGTCCGTGTTTAACTAGCAGTAATATTCAGAGATCAGCAGCATATAGCAAAAATCAAGGTAGGGCTTAATCAAATCCGGGGGAGGGTTTTAATTAATGGATTACTCCAACCTTAGTTCGTTAAAACCGATCGATCGATCGATGGATCGATGCGTCTCATCATGATGGAATGATGGATTCGATTGGATTCGATTCGATCGAGCTATCAACGTAGCGCTACTGTGTATGTACTGTTTGTGTTCTTATCAAACTCTAC] consensusID : consensus_8226#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 467 fasta sequence [GCCGCTTAGAAACACAGGCGATCGATATAATGCAGTACGAACGAAGCACCTTCTACTGGTACTTCCGACGACAGAGTTCGTGAACAATTAGCAGCACAAATAATTAAAACCCATTACCATGCACATGCATGCATACGCGAACTTATAGTGCACATAAAATATATGTGCTCGATCTGGCATACCGACCAAATAGGAGAGCGTAGCGTAGGTAGATCGGCCGGCCGGCTCGGTCGCCCGCTCTCAGCAGGCGGCGCCGGCAGGCGGTGGAGGCGGCGGGTGATGCTGGTGGCCGTGAAGGCCACTGCTGTCGCCGCCCTGCAGCTGCTGCTGCTGCGGCTTCTTGCGCTTCTTCTTCTCGTAGCTGACGCCGCGGGCGCGCGCCTGGTGCTCGCGGACCTCGCGGAGGTAGAGGCGGACGGCGCGCGCGGCGAAGGGGTTGGACTCGGGCGGGCGCCGTACTCCTCGAA] [+] EMBL AU225572 [GCCGCTTAGAAACACAGGCGATCGATATAATGCAGTACGAACGAAGCACCTTCTACTGGTACTTCCGACGACAGAGTTCGTGAACAATTAGCAGCACAAATAATTAAAACCCATTACCATGCACATGCATGCATACGCGAACTTATAGTGCACATAAAATATATGTGCTCGATCTGGCATACCGACCAAATAGGAGAGCGTAGCGTAGGTAGATCGGCCGGCCGGCTCGGTCGCCCGCTCTCAGCAGGCGGCGCCGGCAGGCGGTGGAGGCGGCGGGTGATGCTGGTGGCCGTGAAGGCCACTGCTGTCGCCGCCCTGCAGCTGCTGCTGCTGCGGCTTCTTGCGCTTCTTCTTCTCGTAGCTGACGCCGCGGGCGCGCGCCTGGTGCTCGCGGACCTCGCGGAGGTAGAGGCGGACGGCGCGCGCGGCGAAGGGGTTGGACTCGGGCGGGCGCCGTACTCCTCGAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8226#2 ------------------------------------------------------------ consensus_8226#3 ------------------------------------------------------------ consensus_8226#1 ------------------------------------------------------------ consensus_8226#0 TCACACACCTAGCTAGCAAGTAGGCTCTCTCACTCCACACCCACACTACTCCTCCCAGGC 60 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 ------------------------------------------------------------ consensus_8226#3 ------------------------------------------------------------ consensus_8226#1 ------------------------------------------------------------ consensus_8226#0 TGCCTGCCTAAAAGGCTAGACCTATCCATCTCTTCCCCCCACTCCTCCAGCATCGCCATC 120 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 ------------------------------------------------------------ consensus_8226#3 ------------------------------------------------------------ consensus_8226#1 ------------------------------------------------------------ consensus_8226#0 ATCCACTGTTCATCCACTCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATCGATCC 180 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 ------------------------------------------------------------ consensus_8226#3 ------------------------------------------------------------ consensus_8226#1 ------------------------------------------------------------ consensus_8226#0 CTGCAGGTTCTTGCTGCTGCTGCTGCTGCCTTGCTTGCTGTCAAGCATGGCTTGACCACC 240 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 ------------------------------------------------------------ consensus_8226#3 ------------------------------------------------------------ consensus_8226#1 ------------------------------------------------------------ consensus_8226#0 TGAGAGCGAGGAGAGCATAGCGTAGTACTTGGCTAGCTGCTGTTCAATTCCTCATGGATG 300 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 ------------------------------------------------------------ consensus_8226#3 ------------------------------------------------------------ consensus_8226#1 --------------------------------------------------------GTTT 4 consensus_8226#0 ATTGGAGGATCGCTAGCTAGGTCGCCCGGATCCACGGACACCTCTCCTCGTCTCGTGCTC 360 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 ---------------------------------------CACACACTCCGTCCCAACAAG 21 consensus_8226#3 ------------------------------------------------------------ consensus_8226#1 CTTGTGTTGATCTGAGTTTGATTTGATTTTCAGTTTTGCACCATGCGATCGATCGAGAGT 64 consensus_8226#0 GTGCATGCCAAGATCGATCGATCCCAGCTGCTGCTGCGAGTGGAGCAGTGGAGGAGGAGA 420 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 CTACTCTTCTTCTTCTTCTACCTCCTCACCCCTACCCATTCTCTCTCTCTCTCTCTCTCT 81 consensus_8226#3 ------------------------------------------------------------ consensus_8226#1 GTGTTGTTGTTCTTGTTTTGGTTCTTTTCTAGTAGTATCAGTTGCACTGATTAATTAATT 124 consensus_8226#0 TCGGCTGCTACCTGACCTAGATCGGGAAGCAGATTCATCCGGTTGCATTACGGCGGCGAG 480 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 AGC-TAGCTAGAGCAGCAACCAACCATGGA-GCCTTC-CCCCGACG--CGCCACGCGCCG 136 consensus_8226#3 -------------TAGTACCTCCGAGCTAA-GCCACT-CCAC------CGCCGATTGATC 39 consensus_8226#1 AATATAGCTTGTGTTTTGATTCGGTAGACACGGCTAT-CTGCAGCG--TATCAAA-GCTT 180 consensus_8226#0 GCGAGGGCGAGGATGGATCGTCACCATCACCACCACCACCACCACCACCATCACATGATG 540 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 GGGCAGCGGAAGAGCAGCCTGGTCCG---------TCCTCCTCGGCGTCGGCGC------ 181 consensus_8226#3 GCGTCACGGCGGCGCAGCCCGGCC-------------------GCCAGCGTCGT------ 74 consensus_8226#1 TTCCTGTTGCACACCACACCTACCATGAGT-----TCCTTTCAATCAATGCCTC------ 229 consensus_8226#0 TCG-GGCGGCGGGCAAGACCCGGCGGCGGGGGACGGCGGCGCCGGCGGCGCCACGCAGGA 599 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 CGGCGCCCGCGGCGTCGTCGAACGAAGAAGAAGGGAGACATCAGTCGCAGGCGCAGCAGC 241 consensus_8226#3 CCGTCCGATCGGCAGATCTGAGGAGGGAGAAAGGTTTGCTGCTGCTTGTGCTAGGACGTC 134 consensus_8226#1 TCTCTCTCTCTCTCGATCTGCAGATCAAATATACAATTCGCCTTCTCGATCGAGTAGTTG 289 consensus_8226#0 CAGCTTCTTCCTCGGCCCGGCCGCGGCCGCCATGTTCTCCGGCGCCGGGTCGTCGTCGTC 659 consensus_8226#4 -----------------------------------------------------GCCGCTT 7 consensus_8226#2 AGGTGCAAGAAGCGC--------AGCCGCAGCCGCTGGCGCAGCAGGCGCCGGCG---GC 290 consensus_8226#3 ATGCAGGGAGGCGGC--------GGCGGGGATAGCTCCGGCGGC-GGCGGCGGCGAG-GC 184 consensus_8226#1 ATGAACAGTGTTCCCCTTGATTGATTGATCACCATTATTATAACATCCTCTTTCTTTCTT 349 consensus_8226#0 GGGCGCGGGGACGTCGGCGGG-AGGCGGCGGCGGCGGGC-CATCGCCGTCCAGCTCG-TC 716 consensus_8226#4 AGAAACACAGGCGATCGATATAATGCAGT-ACGAACGAAGCACCTTCTACTGGTACTTCC 66 * consensus_8226#2 GGCGGGGCTGAGCAGGTACGAGTCGCAGAAGC---GGCGGGA--CTGGAAC-ACGTTCCT 344 consensus_8226#3 GCCGCGGCCGAGCAGGTACGAGTCGCAGAAGC---GGCGGGA--CTGGCAC-ACGTTCGG 238 consensus_8226#1 CTCACTGTACCACACACTTCGATCTCTGCAGCCTGAACCAAG--CAAGAATTATAGTATT 407 consensus_8226#0 GCCGTCGCTGAGCCGGTACGAGTCGCAGAAGC---GGCGGGA--CTGGAAC-ACGTTCGG 770 consensus_8226#4 GACGACAGAGTTCGTGAACAATTAGCAGCACAAATAATTAAAACCCATTACCATGCACAT 126 * * * * * * * * * consensus_8226#2 GCAGTACCTGCGGA-ACCAC--AAGCCGCCGCTGACGCTGC-CGCGGTGCAGCGG--CGC 398 consensus_8226#3 GCAGTACCTGCGCA-ACCAC--CGGCCGCCGCTGGAGCTGT-CGCGGTGCAGCGG--CGC 292 consensus_8226#1 AGAACAACTCCAGATATCTCTAAAGCTGATGATCTAGCTCTACTTTCTGCATCGAT-CGA 466 consensus_8226#0 GCAGTACCTGCGGA-ACCAC--CGGCCGCCGCTGTCCCTGT-CGCGGTGCAGCGG--CGC 824 consensus_8226#4 GCA-TGCATACGCGAACTTATAGTGCACATAAAATATATGTGCTCGATCTGGCATACCGA 185 * * * * ** * * * * ** consensus_8226#2 GCACGTCA--TCGAGTTCCTCAAGTACCTGGACCAGTTCG-------GGAAGACCAAGGT 449 consensus_8226#3 GCACGTGC--TGGAGTTCCTCCGGTACCTGGACCAGTTCG-------GGAAGACGAAGGT 343 consensus_8226#1 TCTCGTTAATTAGGGTTAGATCACCGGCCGGCACAGTGCATCTTCAAATAAGCATCATTT 526 consensus_8226#0 GCACGTGC--TGGAGTTCCTCAAGTACATGGACCAGTTCG-------GGAAGACGAAGGT 875 consensus_8226#4 CCAAATAGGAGAGCGTAGCGTAGGTAGATCGGCCGGCCGG-------CTCGGTCGCCCGC 238 * * * ** * * * * consensus_8226#2 GCACGCCGACGGGTGC----GCCTACTTCGGCGAGC-CCAACC-CGCCGGCG-CCGTGCG 502 consensus_8226#3 GCACGCCGCGGGGTGC----CCCTTCTTCGGCCACC-CCTCGC-CGCCGGCG-CCGTGCC 396 consensus_8226#1 GCTCTTTGAGTGATACAGTACTATGCTTCCCCTTCTGCTGATC-TGCTCTCT-CTGTCCC 584 consensus_8226#0 GCACACGCCGGTGTGC----CCCTTCTACGGCCACC-CCAACC-CGCCGGCG-CCATGCC 928 consensus_8226#4 TCTCAGCAGGCGGCGCCG--GCAGGCGGTGGAGGCGGCGGGTGATGCTGGTGGCCGTGAA 296 * * * * * ** * * consensus_8226#2 CCTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCGCTCATCGGCCGCCTCCGCGCC- 561 consensus_8226#3 CGTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCGACGCGCTCGTCGGCCGCCTCCGCGCC- 455 consensus_8226#1 TGCATGTATTACAGTTAATTTGTGTCAGTTCTTGCTTGGCTG--AGCTAAGTTCACGCCA 642 consensus_8226#0 CGTGCCCGCTCCGCCAAGCCTGGGGCTCCCTCGACGCGCTCATCGGCCGCCTCCGCGCC- 987 consensus_8226#4 GGCCACTGCTGTCGCCGCCCTGCAGCTGCTGCTGC-TGC-----GGCTTCTTGCGCTTC- 349 * ** * * * ** * * * * consensus_8226#2 GCCTACGAGGAGTCCGGCG--GCCGCCCGGAGTCCAACCCCTTCGCCGCCCGCGCCGTCC 619 consensus_8226#3 GCCTTCGAGGAGCACGGCG--GCCGCCCCGAGGCCAACCCCTTCGGCGCCCGCGCCGTCC 513 consensus_8226#1 GATCTTCAAAACCCCAATCTTGCTACTGTGTTTTGTTTTTCTTGGACCACCCAGTTATCT 702 consensus_8226#0 GCCTACGAGGAGAACGGCG--GCACGCCGGAGATGAACCCCTTCGGCGCCCGCGCCGTCC 1045 consensus_8226#4 TTCTTCTCGTAGC-TGACGCCGCGGGCGCGCGCCTGGTGCTCGCGGACCTCGCGGAGGTA 408 * ** * * * * consensus_8226#2 GCATCTACCTCCGCGAGGTCCGCGAGGCGCAGGCCAAGGCGCGTGGGATCCCCTACGAGA 679 consensus_8226#3 GCCTCTACCTCCGCGAGGTCCGCGACAGCCAGGCCAAGGCCCGCGGCATCGCCTACGAGA 573 consensus_8226#1 GCCTTTTTTTATTTTTT-TCCAAATCTCACAAAGCTTTGCACGTCAAACATATTAGAAGA 761 consensus_8226#0 GCCTCTACCTGCGCGAGGTGCGCGAGACGCAGGCCAGGGCGAGGGGGATCAGCTACGAGA 1105 consensus_8226#4 GAGGCGGACGGCGCGCGCGGCGAAGGGGTTGGACTCGGGCGGGCGCCGTACTCCTCGAA- 467 * * ** * * consensus_8226#2 AGAAGCGC---AAGCGTGGCGCCGCCGC--CGCCGCCGCC----GCCCCTCCCGTCGTCG 730 consensus_8226#3 AGAAGCGCCGCAAGCGCCCGCCCACCTCCTCGTCTTCGTCTCAGGCCGCCGCCGCCGCCG 633 consensus_8226#1 AGCATTGAGATAACTTCCAGATTAGCTGAAACCCTAGTTCTTTCTCATTCTGAATCATCC 821 consensus_8226#0 AGAAG------AAGCGCAAGA---------AGCCCTCGTC------CGCCGGCGCCGGAG 1144 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 TCGC---GCCGCC-CCCCGTCG----TCACCGC---GCCCGACGAC--GCCACCGGGAC- 776 consensus_8226#3 CCGCC--GCCACCTCCCCGGCGAGCCCAGCCGCT-AGCCCGACGCC--GCCACCGCCACC 688 consensus_8226#1 ACAGTATGTCAAATTCTCAATAGCATTAGCTGCTTGGTTTGACCATTGGTCATGGGGTTG 881 consensus_8226#0 CCGG---GCCCTCGTCCGAGGGGAGCCCGCCGCC--ACCCGGCGGCTCGGC-CAGCGGCG 1198 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 GTCG--GGAGGCGC--CGGCGAGGACGACGACGACGAC----GAG-GCCACCCACTCCGG 827 consensus_8226#3 GCCGACGGAGAGAT--CAGCCGACGTGCGGCCGATGCCACCGGAG-GGCCACTTCTTCAT 745 consensus_8226#1 ACGAACTGACACGCAGCAATTAATGGTTCATGTTTGGCAGGTGAGAGATTGAGGAGATGG 941 consensus_8226#0 GCGG--CGACACGT--CGGCGTCGCCGCAGTTCATCAT-CCCGTGAGTTCTTCTCGATCC 1253 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 CGAGCAGCAGGACACCA-CGCCGGCGGCCTCTCCTACTACTCCTCCGGCAACAAGTGTCG 886 consensus_8226#3 CCCGCACCCACACTTCA-TGC--ACGGACACTTCCTCGTACCGGGCGGCGACGCCGACCA 802 consensus_8226#1 ACATGATCGGCATGGCGTCGCCGGCGGAAAGCCCCGGCGGCGGCGGCACGGCCAGGCCGA 1001 consensus_8226#0 CCATCGCCATCTCCGCATCTCCATTGATCGATCGAGCCTCGCAGCAAGAAATTCCAATCT 1313 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 GTACTACCA------CCGCG-GCGGCGACTGCGGCGGCGGCGAAGGGAAGT-GCGGCGAA 938 consensus_8226#3 CCACCACCAGGTCTCCAACG-CCGGCAATGGCGGCAACACCAACACCAACA-CCAACACC 860 consensus_8226#1 GCAGGTACGAGTCG-CAGAA-GCGGCGGGACTGGCAGACGTTCGGGCAGTA-TCTGCGCA 1058 consensus_8226#0 CCTTGGCAGAAATGCCATCTTGCTTTGCCAGTACAAGGCATCATATCTCTTCTTTCCTCC 1373 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 AGGATCGGCGACGAGTT---CGTGATAAGTGTAGAGAAA-TCATTTGCCT---CCCTTTC 991 consensus_8226#3 AACACCGGCGGCGGCGG---CGGCAACGGCGACGAGATG-GCGGTGGCGA---TGGCGGC 913 consensus_8226#1 ACCACCGGCCGCCGCTGGAGCTCTCCCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTCC 1118 consensus_8226#0 TGAATTGGTTTCGATCTCT-CCCATTTTGCAAAAAAAAG-ATTTCTCCTCTTTTTAATTT 1431 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 AATCCCCTCATCACCCTC-----CAAATTCTAATCCCCTGCAGCATCATCATCATCATCT 1046 consensus_8226#3 GGTGGCGGAGGCGCACGCGG---CGGGGTGCATGCTGCCGCTGTCCGTGTTTAACTAGCA 970 consensus_8226#1 GGTACCTGGACCAGTTCGGG---AAGACGAAGGTGCACGCCCATGGCTGCCCCTTCTTCG 1175 consensus_8226#0 CATCTCTGTCTCGCTTTCTAAGCTAGGACGAAGGTCATGCATGAGTGATTTCAATTGGTA 1491 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 -TAATTTTTAGTGGTTGATTAATTATTATGATTATTACTGTTATTATTTGTTGGTATGAG 1105 consensus_8226#3 GTAATATTCAGAGATCAGCAGCATATAGCAAAAATCAAGGT-AGGGCTTAATCAAATCCG 1029 consensus_8226#1 GCCACCCCTCGCCGCCGGCGCCGTGCCCCTGCCCGCTCCGCCAGGCGTGGGGCAGCCTCG 1235 consensus_8226#0 GCTTAATTAAGACAGAAACAACATGTGTTATGTGTACTTGT---CCTGGGAACAGATTCC 1548 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 AGT---GGAGAGGCCTAATTAAGGGGGT--TTGTAGGATAAT--G------TTAGGATCG 1152 consensus_8226#3 GG----GGAGGGTTTTAATTAATGGATTACTCCAACCTTAGTTCG------TTAAAACCG 1079 consensus_8226#1 ACGCCCTCGTCGGCCGCCTCCGCGCCGCCTTCGAGGAGCACGGCGGCCGCCCTGAGTCCA 1295 consensus_8226#0 ATATATATGCCAAATGCTTT---------------------------------------- 1568 consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 AGTACATAAAAGGCTGCTAAAT-------TAACATGCAGAAAATTTCAATTTGAAGAAAT 1205 consensus_8226#3 ATCGATCGATCGATGGATCGATGCGTCT-CATCATGATGGAATGATGGATTCGATTGGAT 1138 consensus_8226#1 ACCCCTTCGGCGCCCGCGCCGTCCGCCTCTACCTCCGCGACATCCGCGACACGCAGTCCA 1355 consensus_8226#0 ------------------------------------------------------------ consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 AAGAGGAAGACA------------------------------------------------ 1217 consensus_8226#3 TCGATTCGATCGAGCTATCAACGTAGCGCTACTGTGTATGTACTGTTTGTGTTCTTATCA 1198 consensus_8226#1 AGGCCCGCGGCATCGCCTACGAGAAGAAGCGCCGCAAGCGCGCCGCCGCCTCCCACACCA 1415 consensus_8226#0 ------------------------------------------------------------ consensus_8226#4 ------------------------------------------------------------ consensus_8226#2 ------------------- consensus_8226#3 AACTCTAC----------- 1206 consensus_8226#1 AGCAGAAGCAGCAGCAGCA 1434 consensus_8226#0 ------------------- consensus_8226#4 ------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||