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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8228#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2356 fasta sequence
[TTCCATCTTCCTCCTCAGCTCCTCCTCCTCACAACCAGCTTCTTCCTCCTCCACCTCGCCCAATTCTCTCCTCCACGGCTCCACCTCTGCTCGATCGGATCAAGATCAGAATCACGATCAGATCGATCCGCCCGCCATGAGCACGCTATCCGCCGGGGTCCTCCTCAAGCTGCTCGAC-GGCATGAAGGCCGGCGCAGCCAAGCCCGTCGGGGAGCACCGCACCGCGCTGCTCCAGGTCACCGACATCGTCCCCGCCGACCTCGACGACAAGGACCTCCTCCCCCGCCATGGCAAGTTCTACGTCAAGGTCTCCGACTCCTCCCACTCCATCTACGCCACCCTCCCGCTCCCCCAGGCCGATCTCGTCCTCAGCAACAAGCTCCAGCTCGGCCAGTTCGTCCACCTCGACCGCCTCGACCCGGGCTCCCCCGTCCCCGTCATCGTCGGCGCCAGGCCCCTTCCCGGCCGCCACCCGCTCGTCGTCGGCACCCCCGACCCGGCCACCCGCGCCAAGCCCGCCGCGCCCAGGAGGGGCTCCTGGGGCCCTGAGAACCATGCCGGAATCCTCGCCTCCCCCAGGGTCATCAAGCCCACCACGCTCAACTTCGAAGACAGGACGCCCGTCAAGGAGAGACCGCCCGCGCCCTCGCCGGCGCGGAGCACCGCCTCCTCCCTCAGGAAGAGCAGCAGCGTCCTCCCCAGGATCACCAGGAGCAAGAGCTTCGTCGCCGACAGGGCTCCTGACCACCCCAAGATCCCCAAGAGCCCATTCCCCGCCGTCCGTAACCCACCACTATATACTCCCTCTTCAATTCGATTAGATTCGATTTGATTCTTCTCTGAATAATTGAGCAATTGGAGTTTCATCCACAAGTTGTGATAAGAGACGATTGATTATCTGTGCGGTGCAGGAGAAGATCTCAATGAGCTGCTACACAGCTTCGCGGGCGATGAGCAGAAGAGCGCCGCCCAAGGAGGAAGAACCCTCCTCACCGTCTTCGGATGATGAGCTCTGCAGCTCCGCGACGTCGTCCAAGAAGAGGCCGTCCACGAGCACTCGCGTTCCGGTGCCCGGGAAGCTCAATCTCCTGGGGAAGGCAAGTCCCTCAACTCAATTTCCATCCTGAATTCGCAGCGTCCTGATGCAGTCGTCTGATTGGGTTGCTGATTTCACTTCGTTCCTTGATTCAGGAAGCCATGGAGCAGAGGGAGCAAGCTCAGAAGGCCGCCCTCGAGGCGCTGCGCAACGCCTCCGCCACGGACAACGTAGTCAGGATCTACAAGATGTTCGCTGAATTGAGCAAGACGGCGAGGCCCGACGCACCGGCCACCTGCTTCGAGAGCTTCCTCAGCTTCCACCAGGAGGCCGTGCAGGCCGTGACCGACATCGAGTCGATCCAGGCGGCCACCTCGATGGCCGGCGCCGTGGCAGCCGATGAGCCGCCGGTCTTGCAGGAGATTGCGCAGAACAGGTCGTCGTTGTCCAAGAGGAGAGGAGCCCTGGGCGTGTCCAAGTCGGTGTCGTTCGCGCCGGGCACGCTGGATGACGGCGGCGGCAAGAACCGGAGCTCCAACGCCAGCAGAAAGTGCCTTGTACTAGACAAGATCGGAGAAGACGGCGACGAGAAGCGATCTTCTTCTGGTAGTACTACCACCGGTGCTCTCGGGTCGTCGTTGAGGCTGGCGAAGCAGATGCAATGTGAGGCGTCGAGCTGGTTTATGGACTTCGTGGAGGCTGCGCTGGAGACTGGCCTGAAGAAGAAGAGCAAGGCGTCGGCGACGGCGGATGGGCGGAAGCAGAGTAGCTGCTGCTGCCCGCAGTCGCTGATACTGAGGGTGATCAACTGGGTAGAGATGGAGCAGAGTGGCGATGGCAGCAGCAGGAAGCCCAGTCACCCGAGAGCGGCTGCCATTGCCAGGAAGCTTAGGATAAAGGCCAAGAACCCTTAATTCCTGCTAGTTTATTCTTTTGCTTGTTGTAGGCATTGAGAAGGTTATCTGTAGAATCTGTAGATCAAGGAAAGGAAGTTCCAGGATAGAGATGCGGATTCTTTTGCTTCATGGTATATGAAGCTGTTCTGCCCTCCTCCCTGTGACATAAATTGACATCCATACTATACAGTAGTCAATCAGCCACAGAAGGAAGAAAACACCTCTGCTTGAGCAAGTGCTACGCTCTAGTTTGAGTACAAGTAGTACCATCCGTTATTATTCATTTTAACTTGTTTTTTTTATCATTGTCTTATCTTGTGTTTTGCATGATGGGGGTAAGACAACCATTTGCTTGACTAATTCAACCTGCTTTCGCGGTGATAGAAATTGTTCTGATCACGTGGCATGAATGCTTTGCTATACA]
[+] EMBL AK102103 [TTCCATCTTCCTCCTCAGCTCCTCCTCCTCACAACCAGCTTCTTCCTCCTCCACCTCGCCCAATTCTCTCCTCCACGGCTCCACCTCTGCTCGATCGGATCAAGATCAGAATCACGATCAGATCGATCCGCCCGCCATGAGCACGCTATCCGCCGGGGTCCTCCTCAAGCTGCTCGAC GGCATGAAGGCCGGCGCAGCCAAGCCCGTCGGGGAGCACCGCACCGCGCTGCTCCAGGTCACCGACATCGTCCCCGCCGACCTCGACGACAAGGACCTCCTCCCCCGCCATGGCAAGTTCTACGTCAAGGTCTCCGACTCCTCCCACTCCATCTACGCCACCCTCCCGCTCCCCCAGGCCGATCTCGTCCTCAGCAACAAGCTCCAGCTCGGCCAGTTCGTCCACCTCGACCGCCTCGACCCGGGCTCCCCCGTCCCCGTCATCGTCGGCGCCAGGCCCCTTCCCGGCCGCCACCCGCTCGTCGTCGGCACCCCCGACCCGGCCACCCGCGCCAAGCCCGCCGCGCCCAGGAGGGGCTCCTGGGGCCCTGAGAACCATGCCGGAATCCTCGCCTCCCCCAGGGTCATCAAGCCCACCACGCTCAACTTCGAAGACAGGACGCCCGTCAAGGAGAGACCGCCCGCGCCCTCGCCGGCGCGGAGCACCGCCTCCTCCCTCAGGAAGAGCAGCAGCGTCCTCCCCAGGATCACCAGGAGCAAGAGCTTCGTCGCCGACAGGGCTCCTGACCACCCCAAGATCCCCAAGAGCCCATTCCCCGCCGTCCGTAACCCACCACTATATACTCCCTCTTCAATTCGATTAGATTCGATTTGATTCTTCTCTGAATAATTGAGCAATTGGAGTTTCATCCACAAGTTGTGATAAGAGACGATTGATTATCTGTGCGGTGCAGGAGAAGATCTCAATGAGCTGCTACACAGCTTCGCGGGCGATGAGCAGAAGAGCGCCGCCCAAGGAGGAAGAACCCTCCTCACCGTCTTCGGATGATGAGCTCTGCAGCTCCGCGACGTCGTCCAAGAAGAGGCCGTCCACGAGCACTCGCGTTCCGGTGCCCGGGAAGCTCAATCTCCTGGGGAAGGCAAGTCCCTCAACTCAATTTCCATCCTGAATTCGCAGCGTCCTGATGCAGTCGTCTGATTGGGTTGCTGATTTCACTTCGTTCCTTGATTCAGGAAGCCATGGAGCAGAGGGAGCAAGCTCAGAAGGCCGCCCTCGAGGCGCTGCGCAACGCCTCCGCCACGGACAACGTAGTCAGGATCTACAAGATGTTCGCTGAATTGAGCAAGACGGCGAGGCCCGACGCACCGGCCACCTGCTTCGAGAGCTTCCTCAGCTTCCACCAGGAGGCCGTGCAGGCCGTGACCGACATCGAGTCGATCCAGGCGGCCACCTCGATGGCCGGCGCCGTGGCAGCCGATGAGCCGCCGGTCTTGCAGGAGATTGCGCAGAACAGGTCGTCGTTGTCCAAGAGGAGAGGAGCCCTGGGCGTGTCCAAGTCGGTGTCGTTCGCGCCGGGCACGCTGGATGACGGCGGCGGCAAGAACCGGAGCTCCAACGCCAGCAGAAAGTGCCTTGTACTAGACAAGATCGGAGAAGACGGCGACGAGAAGCGATCTTCTTCTGGTAGTACTACCACCGGTGCTCTCGGGTCGTCGTTGAGGCTGGCGAAGCAGATGCAATGTGAGGCGTCGAGCTGGTTTATGGACTTCGTGGAGGCTGCGCTGGAGACTGGCCTGAAGAAGAAGAGCAAGGCGTCGGCGACGGCGGATGGGCGGAAGCAGAGTAGCTGCTGCTGCCCGCAGTCGCTGATACTGAGGGTGATCAACTGGGTAGAGATGGAGCAGAGTGGCGATGGCAGCAGCAGGAAGCCCAGTCACCCGAGAGCGGCTGCCATTGCCAGGAAGCTTAGGATAAAGGCCAAGAACCCTTAATTCCTGCTAGTTTATTCTTTTGCTTGTTGTAGGCATTGAGAAGGTTATCTGTAGAATCTGTAGATCAAGGAAAGGAAGTTCCAGGATAGAGATGCGGATTCTTTTGCTTCATGGTATATGAAGCTGTTCTGCCCTCCTCCCTGTGACATAAATTGACATCCATACTATACAGTAGTCAATCAGCCACAGAAGGAAGAAAACACCTCTGCTTGAGCAAGTGCTACGCTCTAGTTTGAGTACAAGTAGTACCATCCGTTATTATTCATTTTAACTTGTTTTTTTTATCATTGTCTTATCTTGTGTTTTGCATGATGGGGGTAAGACAACCATTTGCTTGACTAATTCAACCTGCTTTCGCGGTGATAGAAATTGTTCTGATCACGTGGCATGAATGCTTTGCTATACA]
[+] EMBL C97308 [ CTCACAACCAGCTTCTTCCTCCTCCACCTCGCCCAATTCTCTCCTCCACGGCTCCACCTCTGCTCGATCGGATCAAGATCAGAATCACGATCAGATCGATCCGNCCGCCATGAGCACGCTATCCGCCGGGGTCCTCCTCAAGCTGCTCGACGGGCATGAAGGCCGGCGCA NAAAGCCCGTCGGGGAGCACCGCACCG GCTGCTCCAGGTCACCGACATCGTNCCCGCCGACCTCGACGACAAGGACCTTCTTCCCCGCCATGGCAAGTTCTACGTCAAGGTCTCCGACTTCTTCCANTTCATNTACGGCAACCTt ]
consensusID : consensus_8228#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 690 fasta sequence
[CTTCGACGACAAGGACNTCTTCCCCCGCCATGNCAAGTTCTACGTCAAGGTCTCCGAACTCCTCCCATTCCATCTACGCCACCTTCCCCGNTCCCCCCAGGCCGATCTCGTCCTCAGCAACAAGCTCCAGCTCGGCCAGTTCGTTGAGGCTGGCGAAGCAGATGCAATGTGAGGCGTCGAGCTGGTTTATGGATTCGTGGAGNTGCGCTGGAGACTGNCCTGAAGAAGAAGAGCAAGGCGTCGGCGACGGCGGATGGGCGGAAGCAGAGTAGCTNCTGCTGCCCGCAGTCGCTGATACTGAGGGTGATCAACTGGGTAGAGATGGAGCAGAGTGNCGATGGCAGCAGCAGGAAGCCCAGTCACCCGAGAGCGGCTGCCATTGCCAGGAAGCTTAGGATAAAGGCCAAGAACCCTTAATTCCTGCTAGTTTATTCTTTTGCTTGTTGTAGGCATTGAGAAGGTTATCTGTAGAATCTGTAGATCAAGGAAAGGAAGTTCCAGGATAGAGATGCGGATTCTTTTGCTTCATGGTATATGAAGCTGTTCTGCCCTCCTCCCTGTGACATAAATTGACATCCATACTATACAGTAGTCAATCAGCCACAGAAGGAAGAAAACACCTCTGCTTGAGCAAGTNTACGCTCTAGTTTGAGTACAAGTAGTACCATCCGTTATTATTCATTTTAAAAA]
[+] EMBL AU083404 [CTTCGACGACAAGGACNTCTTCCCCCGCCATGNCAAGTTCTACGTCAAGGTCTCCGAACTCCTCCCATTCCATCTACGCCACCTTCCCCGNTCCCCCCAGGCCGATCTCGTCCTCAGCAACAAGCTCCAGCTCGGCCAGTTCGTTGAGGCTGGCGAAGCAGATGCAATGTGAGGCGTCGAGCTGGTTTATGGATTCGTGGAGNTGCGCTGGAGACTGNCCTGAAGAAGAAGAGCAAGGCGTCGGCGACGGCGGATGGGCGGAAGCAGAGTAGCTNCTGCTGCCCGCAGTCGCTGATACTGAGGGTGATCAACTGGGTAGAGATGGAGCAGAGTGNCGATGGCAGCAGCAGGAAGCCCAGTCACCCGAGAGCGGCTGCCATTGCCAGGAAGCTTAGGATAAAGGCCAAGAACCCTTAATTCCTGCTAGTTTATTCTTTTGCTTGTTGTAGGCATTGAGAAGGTTATCTGTAGAATCTGTAGATCAAGGAAAGGAAGTTCCAGGATAGAGATGCGGATTCTTTTGCTTCATGGTATATGAAGCTGTTCTGCCCTCCTCCCTGTGACATAAATTGACATCCATACTATACAGTAGTCAATCAGCCACAGAAGGAAGAAAACACCTCTGCTTGAGCAAGTNTACGCTCTAGTTTGAGTACAAGTAGTACCATCCGTTATTATTCATTTTAAAAA]
consensusID : consensus_8228#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 680 fasta sequence
[TCCAGGCGGCCACCTCGATGGCGGGCGCCGTGGCAGCCGATGAGCCGCCGGTCTTGCAGGAGATTGCGCAGAACAGGTNGTCGTTGTCCAAGAGGAGAGGCGCCCTGGGCGTGTCCAAGTCGGTGTCGTTCGCGCCGGGCACGCTGGATGACGGCGGCGGCAAGAACCGGAGCTCCAACGCCAGCAGAAAGTGCCTTGTACTAGACAAGATCGGAGAAGACGGCGACGAGAAGCGATCTTCTTCTGGTAGTACTTCCACCGGTGCTCTCGGGTCGTCGTTGAGGCTGGCGAAGCAGATACAATGTGAGGCGTCGAGCTGGTTTATGGACTTCGTGGAGGCTGCGCTGGAGACTGGCCTGAAGAAGAAGAGCAAGGCGTCGGCGACGGCGGATGGGCGGAAGCAGAGTAGCTGCTGCTGCCCGCAGTCGCTGATACTGAGGGTGACCAACTGGGTAGAGATGGAGCAGAGTGGCGATGGCAGCAGCAGGAAGCCCAGTCACCCGAGAGCGGCTGCCATTGCCAGGAAGCTTAGGATAAAGGCCAAGAACCCTTAATTCCTGCTAGTTTATTCTTTTGCTTGTTGTAGGCATTGAGAAGGTTATCTGTAGAATCTGTAGATCAAGGAAAGGAAGTTCCAGGATAGAGATGCGGATTCTTTTGCTTCATGGTAAAAAAAAAAA]
[-] EMBL CA759834 [TCCAGGCGGCCACCTCGATGGCGGGCGCCGTGGCAGCCGATGAGCCGCCGGTCTTGCAGGAGATTGCGCAGAACAGGTNGTCGTTGTCCAAGAGGAGAGGCGCCCTGGGCGTGTCCAAGTCGGTGTCGTTCGCGCCGGGCACGCTGGATGACGGCGGCGGCAAGAACCGGAGCTCCAACGCCAGCAGAAAGTGCCTTGTACTAGACAAGATCGGAGAAGACGGCGACGAGAAGCGATCTTCTTCTGGTAGTACTTCCACCGGTGCTCTCGGGTCGTCGTTGAGGCTGGCGAAGCAGATACAATGTGAGGCGTCGAGCTGGTTTATGGACTTCGTGGAGGCTGCGCTGGAGACTGGCCTGAAGAAGAAGAGCAAGGCGTCGGCGACGGCGGATGGGCGGAAGCAGAGTAGCTGCTGCTGCCCGCAGTCGCTGATACTGAGGGTGACCAACTGGGTAGAGATGGAGCAGAGTGGCGATGGCAGCAGCAGGAAGCCCAGTCACCCGAGAGCGGCTGCCATTGCCAGGAAGCTTAGGATAAAGGCCAAGAACCCTTAATTCCTGCTAGTTTATTCTTTTGCTTGTTGTAGGCATTGAGAAGGTTATCTGTAGAATCTGTAGATCAAGGAAAGGAAGTTCCAGGATAGAGATGCGGATTCTTTTGCTTCATGGTAAAAAAAAAAA]
consensusID : consensus_8228#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 533 fasta sequence
[ACTGCTAATGGCAGNAANNAAAGAACCTTCTNNTNCCNGAAGCACNTNAAACTACAGGGTTAACNAACCGGGGAAAAGATGGANCNAGAAGTGGCTANTGGCAGCAANAAGGGAANCCCCAAGTCACCCCGAAAAAGCGGCTTCCATTTCCNAGGAATCCTTAGGGATAAAGNCNAAGGAACCCCTTAATNCCCTGCTAGTTTAATCCTTTTGCCTTGTTTGTAGGTCATTGAGAAGGTTAANCTGTAGAAATCTGTAGATCAAGGAAAGGAAGTNCCCAGGATAAGAGATGCGGATNCTTTTGCTCCATGGTATATGAAGCTGNTCTGCCCTCCTCCCTGTGACATAAATTGACATCCATACTATACAGTAGTCAATCAGCCACAGAAGGAAGAAAACACCTCTGCTTGAGCAAGTCTACGCTCTAGTTTGAGTACAAGTAGTACCATCCGTTATTATTCATTTTAACTTGTTTTTTTTATCATTGTCTTATCTTGTGTTTTGCATGATGGGGGTAAGACAACCATTTGCTT]
[-] EMBL D42954 [ACTGCTAATGGCAGNAANNAAAGAACCTTCTNNTNCCNGAAGCACNTNAAACTACAGGGTTAACNAACCGGGGAAAAGATGGANCNAGAAGTGGCTANTGGCAGCAANAAGGGAANCCCCAAGTCACCCCGAAAAAGCGGCTTCCATTTCCNAGGAATCCTTAGGGATAAAGNCNAAGGAACCCCTTAATNCCCTGCTAGTTTAATCCTTTTGCCTTGTTTGTAGGTCATTGAGAAGGTTAANCTGTAGAAATCTGTAGATCAAGGAAAGGAAGTNCCCAGGATAAGAGATGCGGATNCTTTTGCTCCATGGTATATGAAGCTGNTCTGCCCTCCTCCCTGTGACATAAATTGACATCCATACTATACAGTAGTCAATCAGCCACAGAAGGAAGAAAACACCTCTGCTTGAGCAAGTCTACGCTCTAGTTTGAGTACAAGTAGTACCATCCGTTATTATTCATTTTAACTTGTTTTTTTTATCATTGTCTTATCTTGTGTTTTGCATGATGGGGGTAAGACAACCATTTGCTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 TTCCATCTTCCTCCTCAGCTCCTCCTCCTCACAACCAGCTTCTTCCTCCTCCACCTCGCC 60
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 CAATTCTCTCCTCCACGGCTCCACCTCTGCTCGATCGGATCAAGATCAGAATCACGATCA 120
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 GATCGATCCGCCCGCCATGAGCACGCTATCCGCCGGGGTCCTCCTCAAGCTGCTCGACGG 180
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 CATGAAGGCCGGCGCAGCCAAGCCCGTCGGGGAGCACCGCACCGCGCTGCTCCAGGTCAC 240
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 CGACATCGTCCCCGCCGACCTCGACGACAAGGACCTCCTCCCCCGCCATGGCAAGTTCTA 300
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 CGTCAAGGTCTCCGACTCCTCCCACTCCATCTACGCCACCCTCCCGCTCCCCCAGGCCGA 360
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 TCTCGTCCTCAGCAACAAGCTCCAGCTCGGCCAGTTCGTCCACCTCGACCGCCTCGACCC 420
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 GGGCTCCCCCGTCCCCGTCATCGTCGGCGCCAGGCCCCTTCCCGGCCGCCACCCGCTCGT 480
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 CGTCGGCACCCCCGACCCGGCCACCCGCGCCAAGCCCGCCGCGCCCAGGAGGGGCTCCTG 540
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 GGGCCCTGAGAACCATGCCGGAATCCTCGCCTCCCCCAGGGTCATCAAGCCCACCACGCT 600
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 CAACTTCGAAGACAGGACGCCCGTCAAGGAGAGACCGCCCGCGCCCTCGCCGGCGCGGAG 660
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 CACCGCCTCCTCCCTCAGGAAGAGCAGCAGCGTCCTCCCCAGGATCACCAGGAGCAAGAG 720
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 CTTCGTCGCCGACAGGGCTCCTGACCACCCCAAGATCCCCAAGAGCCCATTCCCCGCCGT 780
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 CCGTAACCCACCACTATATACTCCCTCTTCAATTCGATTAGATTCGATTTGATTCTTCTC 840
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 TGAATAATTGAGCAATTGGAGTTTCATCCACAAGTTGTGATAAGAGACGATTGATTATCT 900
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 GTGCGGTGCAGGAGAAGATCTCAATGAGCTGCTACACAGCTTCGCGGGCGATGAGCAGAA 960
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 GAGCGCCGCCCAAGGAGGAAGAACCCTCCTCACCGTCTTCGGATGATGAGCTCTGCAGCT 1020
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 CCGCGACGTCGTCCAAGAAGAGGCCGTCCACGAGCACTCGCGTTCCGGTGCCCGGGAAGC 1080
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 TCAATCTCCTGGGGAAGGCAAGTCCCTCAACTCAATTTCCATCCTGAATTCGCAGCGTCC 1140
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 TGATGCAGTCGTCTGATTGGGTTGCTGATTTCACTTCGTTCCTTGATTCAGGAAGCCATG 1200
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 GAGCAGAGGGAGCAAGCTCAGAAGGCCGCCCTCGAGGCGCTGCGCAACGCCTCCGCCACG 1260
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 GACAACGTAGTCAGGATCTACAAGATGTTCGCTGAATTGAGCAAGACGGCGAGGCCCGAC 1320
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 GCACCGGCCACCTGCTTCGAGAGCTTCCTCAGCTTCCACCAGGAGGCCGTGCAGGCCGTG 1380
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 ACCGACATCGAGTCGATCCAGGCGGCCACCTCGATGGCCGGCGCCGTGGCAGCCGATGAG 1440
consensus_8228#2 ----------------TCCAGGCGGCCACCTCGATGGCGGGCGCCGTGGCAGCCGATGAG 44
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 CCGCCGGTCTTGCAGGAGATTGCGCAGAACAGGTCGTCGTTGTCCAAGAGGAGAGGAGCC 1500
consensus_8228#2 CCGCCGGTCTTGCAGGAGATTGCGCAGAACAGGTNGTCGTTGTCCAAGAGGAGAGGCGCC 104
consensus_8228#1 --------------------------------------CTTCGACGACAAGGACNTCTTC 22
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 CTGGGCGTGTCCAAGTCGGTGTCGTTCGCGCCGGGCACGCTGGATGACGGCGGCGGCAAG 1560
consensus_8228#2 CTGGGCGTGTCCAAGTCGGTGTCGTTCGCGCCGGGCACGCTGGATGACGGCGGCGGCAAG 164
consensus_8228#1 CCCCGCCATGNCAAGTTCTACGTCAAGGTCTCCGAACTCCTCCCATTCCATCTACGCCAC 82
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 AACCGGAGCTCCAACGCCAGCAGAAAGTGCCTTGTACTAGACAAGATCGGAGAAGACGGC 1620
consensus_8228#2 AACCGGAGCTCCAACGCCAGCAGAAAGTGCCTTGTACTAGACAAGATCGGAGAAGACGGC 224
consensus_8228#1 CTTCCCCGNTCCCCCCAGGCCGATCTCGTCCTCAGCAACAAGCTCCAGCTCGGCCAGTTC 142
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 GACGAGAAGCGATCTTCTTCTGGTAGTACTACCACCGGTGCTCTCGGGTCG-------TC 1673
consensus_8228#2 GACGAGAAGCGATCTTCTTCTGGTAGTACTTCCACCGGTGCTCTCGGGTCG-------TC 277
consensus_8228#1 GTTGAGGCTGGCGAAGCAGATGCAATGTGAGGCGTCGAGCTGGTTTATGGA-TTCGTGGA 201
consensus_8228#3 ------------------------------------------------------------
consensus_8228#0 GTTGAGGCTGGCGAAGCAGATGCAATGTGAGGCGTCGAGCTGGTTTATGGACTTCGTGGA 1733
consensus_8228#2 GTTGAGGCTGGCGAAGCAGATACAATGTGAGGCGTCGAGCTGGTTTATGGACTTCGTGGA 337
consensus_8228#1 GN-TGCGCTGGAGACTGNCCTGAAGAAGAAGAGCAAGGCGTCGGCGACGGCGGATGGGCG 260
consensus_8228#3 ----------------------------------------------ACTGCTAATGGCAG 14
consensus_8228#0 GGCTGCGCTGGAGACTGGCCTGAAGAAGAAGAGCAAGGCGTCGGCGACGGCGGATGGGCG 1793
consensus_8228#2 GGCTGCGCTGGAGACTGGCCTGAAGAAGAAGAGCAAGGCGTCGGCGACGGCGGATGGGCG 397
** ** **** *
consensus_8228#1 GAAGCAGAGTAGCTNCTGCTGCCCGCAGTCGCTGATACTG-AGGGTGATCAA--CTGGGT 317
consensus_8228#3 NAANNAAAGAACCTTCTNNTNCCNGAAGCACNTNAAACTACAGGGTTAACNAACCGGGGA 74
consensus_8228#0 GAAGCAGAGTAGCTGCTGCTGCCCGCAGTCGCTGATACTG-AGGGTGATCAA--CTGGGT 1850
consensus_8228#2 GAAGCAGAGTAGCTGCTGCTGCCCGCAGTCGCTGATACTG-AGGGTGACCAA--CTGGGT 454
** * ** * ** ** * ** * ** * * *** ***** * * * * ***
consensus_8228#1 AGAGATGGAGCA--GAGTGNC-GATGGCAGCAGCA--GGAAGCCC--AGTCACCC---GA 367
consensus_8228#3 AAAGATGGANCNAGAAGTGGCTANTGGCAGCAANAAGGGAANCCCCAAGTCACCCCGAAA 134
consensus_8228#0 AGAGATGGAGCA--GAGTGGC-GATGGCAGCAGCA--GGAAGCCC--AGTCACCC---GA 1900
consensus_8228#2 AGAGATGGAGCA--GAGTGGC-GATGGCAGCAGCA--GGAAGCCC--AGTCACCC---GA 504
* ******* * **** * ******** * **** *** ******** *
consensus_8228#1 GAGCGGCTGCCATTGCCAGGAAG--CTTAGG-ATAAAGGCCAAGAA--CCCTTAATTCC- 421
consensus_8228#3 AAGCGGCTTCCATTTCCNAGGAATCCTTAGGGATAAAGNCNAAGGAACCCCTTAATNCCC 194
consensus_8228#0 GAGCGGCTGCCATTGCCAGGAAG--CTTAGG-ATAAAGGCCAAGAA--CCCTTAATTCC- 1954
consensus_8228#2 GAGCGGCTGCCATTGCCAGGAAG--CTTAGG-ATAAAGGCCAAGAA--CCCTTAATTCC- 558
******* ***** ** * * ****** ****** * *** * ******** **
consensus_8228#1 TGCTAGTTTA-TTCTTTTGCTTG--TTGTAGG-CATTGAGAAGGTTA-TCTGTAGAA-TC 475
consensus_8228#3 TGCTAGTTTAATCCTTTTGCCTTGTTTGTAGGTCATTGAGAAGGTTAANCTGTAGAAATC 254
consensus_8228#0 TGCTAGTTTA-TTCTTTTGCTTG--TTGTAGG-CATTGAGAAGGTTA-TCTGTAGAA-TC 2008
consensus_8228#2 TGCTAGTTTA-TTCTTTTGCTTG--TTGTAGG-CATTGAGAAGGTTA-TCTGTAGAA-TC 612
********** * ******* * ******* ************** ******** **
consensus_8228#1 TGTAGATCAAGGAAAGGAAGTTCC-AGGATA-GAGATGCGGATTCTTTTGCTTCATGGTA 533
consensus_8228#3 TGTAGATCAAGGAAAGGAAGTNCCCAGGATAAGAGATGCGGATNCTTTTGCTCCATGGTA 314
consensus_8228#0 TGTAGATCAAGGAAAGGAAGTTCC-AGGATA-GAGATGCGGATTCTTTTGCTTCATGGTA 2066
consensus_8228#2 TGTAGATCAAGGAAAGGAAGTTCC-AGGATA-GAGATGCGGATTCTTTTGCTTCATGGTA 670
********************* ** ****** *********** ******** *******
consensus_8228#1 TATGAAGCTGTTCTGCCCTCCTCCCTGTGACATAAATTGACATCCATACTATACAGTAGT 593
consensus_8228#3 TATGAAGCTGNTCTGCCCTCCTCCCTGTGACATAAATTGACATCCATACTATACAGTAGT 374
consensus_8228#0 TATGAAGCTGTTCTGCCCTCCTCCCTGTGACATAAATTGACATCCATACTATACAGTAGT 2126
consensus_8228#2 AAAAAAAAAA-------------------------------------------------- 680
* **
consensus_8228#1 CAATCAGCCACAGAAGGAAGAAAACACCTCTGCTTGAGCAAGTNTACGCTCTAGTTTGAG 653
consensus_8228#3 CAATCAGCCACAGAAGGAAGAAAACACCTCTGCTTGAGCAAGTCTACGCTCTAGTTTGAG 434
consensus_8228#0 CAATCAGCCACAGAAGGAAGAAAACACCTCTGCTTGAGCAAGTGCTACGCTCTAGTTTGA 2186
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 TACAAGTAGTACCATCCGTTATTATTCATTTTAAAAA----------------------- 690
consensus_8228#3 TACAAGTAGTACCATCCGTTATTATTCATTTTAACTTGTTTTTTTTATCATTGTCTTATC 494
consensus_8228#0 GTACAAGTAGTACCATCCGTTATTATTCATTTTAACTTGTTTTTTTTATCATTGTCTTAT 2246
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 ------------------------------------------------------------
consensus_8228#3 TTGTGTTTTGCATGATGGGGGTAAGACAACCATTTGCTT--------------------- 533
consensus_8228#0 CTTGTGTTTTGCATGATGGGGGTAAGACAACCATTTGCTTGACTAATTCAACCTGCTTTC 2306
consensus_8228#2 ------------------------------------------------------------
consensus_8228#1 --------------------------------------------------
consensus_8228#3 --------------------------------------------------
consensus_8228#0 GCGGTGATAGAAATTGTTCTGATCACGTGGCATGAATGCTTTGCTATACA 2356
consensus_8228#2 --------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||