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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8231#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2624 fasta sequence
[AAGTTTCAACCTCCCTTCTCCAACTTGCAATGTCTTCATCTCACACGGTGACAGTCTCCATGGATGTTGAAGCCGGACAGAAAAACAAAGATAAGAAGGGGATCAGCCAAGATCTGATCCTGGCTTACAAGACTCTTGGTGTTGTTTTCGGTGGCCTTGTTACCTCACCACTCTACGTCTACCCATCCATGAATTTGACGAATCCTACTGAAGAAGACTACCTGGGAATATACAGCATCATGTTCTGGACCCTCACTCTCATTGGCGTAGTCAAGTACATATGCATCGCTCTCAACGCTGACGACCACGGCGAAGGTGGCACATTTGCCATGTATTCTCTGCTCTGTCAGCACGCAAACATTGGGATCCTTCCATCCAAGAAGATCTACACTGAAGAAGAGAACCTGATCTCGAATCAGCCTGTCGTAGCTGGAAGGCCTGGAAGACTGAGAAGGTTCATCGAAAGCAGCATAATCGCCAGGAGGCTGCTGCTGCTCACAGCCATCCTAGGCATGTGCATGCTCATCGGCGATGGCATCCTCACTCCTGCAATCTCAGTCTTGTCAGCGA-TTGATGGACTCAGAGGCCCGTTCCCATCCGTCAGTAAACCTGCTG-TGGA-GGGCCTGTCGGCCGCGATTCTCGTTGGGCTGTTC-TTGCTGCAGAAGTACGGCACGTCGAAGGTGAGCTTCATGTTCTCGCCGATCATGGCGGCGTGGACGTTCGCCACCCCGGTCATCGGCGTGTACAGCATCTGGCGCTACTACCCTGGCATCTTCAAAGCCATGTCGCCGCATTACATCGTCAGATTCTTCATGACGAACCAGACCAGAGGCTGGCAGCTACTCGGCGGCACCGTCCTCTGCATCACAGGTGCCGAGGCGATGTTCGCGGATCTTGGTCACTTCAGCAAGAGGTCCATCCAGATCGCGTTCATGTCGAGCATATACCCTTCGCTGGTGCTGACGTACGCCGGGCAGACGGCGTACCTGATCAACAACGTCGACGACTTCAGCGACGGGTTCTACAAGTTCGTGCCGCGGCCGGTGTACTGGCCGATGTTCATCATCGCGACGCTGGCGGCGATCGTGGCGAGCCAGTCGCTGATCTCGGCCACCTTCTCCGTCATCAAGCAGTCGGTGGTGCTGGACTACTTCCCGCGGGTGAAGGTGGTGCACACGTCCAAGGACAAGGAAGGGGAGGTGTACTCGCCGGAGACCAACTACATGCTGATGCTGCTGTGCGTGGGCGTCATCCTCGGCTTCGGCGACGGCAAGGACATCGGCAACGCGTTCGGGGTGGTGGTGATCCTCGTGATGCTCATCACCACCATCCTGCTCACGCTGGTGATGCTCATCATCTGGGGCACCCACGTCGTGCTGGTGGCGCTCTACTTAGTGCCGTTCCTGCTCCTCGAGGCCACATACGTGAGCGCCGTGTGCACCAAGATCCTCCGCGGAGGGTGGGTGCCGTTCGCGGTGTCGGTGGCGCTGGCGGCGGTCATGTTCGGGTGGTACTACGGCCGGCAGCGGAAGACGGAGTACGAGGCGGCGAACAAGGTGACGCTGGAGCGGCTCGGCGAGCTGCTGTCCGGCCCCGGCTTGCGCCGCGTCCCGGGCCTCTGCTTCTTCTACAGCAACAGGCAGGACGGCGGGTGGCTCACCCCGGTGCTCGCGCACTACATCAGGAACATGCGGTCGCTGCACGAGGTGACCGTGTTCCTCACGCTCCGGTACCTGCTGGTGGCGAAGGTGGACGGCAAGGACAGGGTGCAGGCCGTGCGCCGGCTGGGGCCAGCGGGGGTGTACGGCTGCACGATCCAGTACGGGTACGCCGACGCGATCGACTTCGAGGAGGACGACATCGCCGGGCAGGTGGTGGGGGCGCTGCGGGAGCGGGTCGTCGACGGGGAGGAGGAGGGGGAGCGGGTGGAGGCGGCGAGGGCGGCCGGGGTGGTGCACGTGAGGGGGAAGATGAGGTTCCACGTCGGGAAGGACACGAGGCTGTTCGACCGGGTGCTGCTCGGGTTCTACGAGTTGCTGCACGGCGCGTGCCGCTCCGCGCTGCCGGCGCTCGGGATCCCGCTGCAGCAGCGCGTCGAGATCGGCATGCTCTACAAGGCCTAACGGCGCCGAACGCCACGCACGCGCCCCACGAATCCGTACGTACGTACGTGGCCATTAATTACCATTAGCAGTATAACCCCTATTATTAGTGTGGATATTATGGGTACCCCATACCCATACGGCATGGTTATCCGACCAGTCATAGGGGATAACTTATATCTATAGAATATGTAATAGATCATGACTCGGGTATTACGTTTCCTTATATATTACGGAACAGCCTAAAGTCCTGGTTTGATAATATTGTAAAGTAGATTTAGGAAACCGATACCGTATTGGTTAAGGTTTCTATCTTGTAATCCTGCCCCCCACCCTATATAAGGTGGGCAGGAGGCCCTCTAGGGGGCATGAGACAACCTGATCGTCAGATCTATAATACACCCGGCGGATTCAAATCCCCAAACAGGAGTAGGGTATTACCTCTCATTGAGAGGGCCCGAACCTGTCTAAAAAAAAAAAANAAAAAAAAANNAAAAAAAAAAAAAAANNNAAAAAANAAAA]
[+] EMBL AK071698 [AAGTTTCAACCTCCCTTCTCCAACTTGCAATGTCTTCATCTCACACGGTGACAGTCTCCATGGATGTTGAAGCCGGACAGAAAAACAAAGATAAGAAGGGGATCAGCCAAGATCTGATCCTGGCTTACAAGACTCTTGGTGTTGTTTTCGGTGGCCTTGTTACCTCACCACTCTACGTCTACCCATCCATGAATTTGACGAATCCTACTGAAGAAGACTACCTGGGAATATACAGCATCATGTTCTGGACCCTCACTCTCATTGGCGTAGTCAAGTACATATGCATCGCTCTCAACGCTGACGACCACGGCGAAGGTGGCACATTTGCCATGTATTCTCTGCTCTGTCAGCACGCAAACATTGGGATCCTTCCATCCAAGAAGATCTACACTGAAGAAGAGAACCTGATCTCGAATCAGCCTGTCGTAGCTGGAAGGCCTGGAAGACTGAGAAGGTTCATCGAAAGCAGCATAATCGCCAGGAGGCTGCTGCTGCTCACAGCCATCCTAGGCATGTGCATGCTCATCGGCGATGGCATCCTCACTCCTGCAATCTCAGTCTTGTCAGCGA TTGATGGACTCAGAGGCCCGTTCCCATCCGTCAGTAAACCTGCTG TGGA GGGCCTGTCGGCCGCGATTCTCGTTGGGCTGTTC TTGCTGCAGAAGTACGGCACGTCGAAGGTGAGCTTCATGTTCTCGCCGATCATGGCGGCGTGGACGTTCGCCACCCCGGTCATCGGCGTGTACAGCATCTGGCGCTACTACCCTGGCATCTTCAAAGCCATGTCGCCGCATTACATCGTCAGATTCTTCATGACGAACCAGACCAGAGGCTGGCAGCTACTCGGCGGCACCGTCCTCTGCATCACAGGTGCCGAGGCGATGTTCGCGGATCTTGGTCACTTCAGCAAGAGGTCCATCCAGATCGCGTTCATGTCGAGCATATACCCTTCGCTGGTGCTGACGTACGCCGGGCAGACGGCGTACCTGATCAACAACGTCGACGACTTCAGCGACGGGTTCTACAAGTTCGTGCCGCGGCCGGTGTACTGGCCGATGTTCATCATCGCGACGCTGGCGGCGATCGTGGCGAGCCAGTCGCTGATCTCGGCCACCTTCTCCGTCATCAAGCAGTCGGTGGTGCTGGACTACTTCCCGCGGGTGAAGGTGGTGCACACGTCCAAGGACAAGGAAGGGGAGGTGTACTCGCCGGAGACCAACTACATGCTGATGCTGCTGTGCGTGGGCGTCATCCTCGGCTTCGGCGACGGCAAGGACATCGGCAACGCGTTCGGGGTGGTGGTGATCCTCGTGATGCTCATCACCACCATCCTGCTCACGCTGGTGATGCTCATCATCTGGGGCACCCACGTCGTGCTGGTGGCGCTCTACTTAGTGCCGTTCCTGCTCCTCGAGGCCACATACGTGAGCGCCGTGTGCACCAAGATCCTCCGCGGAGGGTGGGTGCCGTTCGCGGTGTCGGTGGCGCTGGCGGCGGTCATGTTCGGGTGGTACTACGGCCGGCAGCGGAAGACGGAGTACGAGGCGGCGAACAAGGTGACGCTGGAGCGGCTCGGCGAGCTGCTGTCCGGCCCCGGCTTGCGCCGCGTCCCGGGCCTCTGCTTCTTCTACAGCAACAGGCAGGACGGCGGGTGGCTCACCCCGGTGCTCGCGCACTACATCAGGAACATGCGGTCGCTGCACGAGGTGACCGTGTTCCTCACGCTCCGGTACCTGCTGGTGGCGAAGGTGGACGGCAAGGACAGGGTGCAGGCCGTGCGCCGGCTGGGGCCAGCGGGGGTGTACGGCTGCACGATCCAGTACGGGTACGCCGACGCGATCGACTTCGAGGAGGACGACATCGCCGGGCAGGTGGTGGGGGCGCTGCGGGAGCGGGTCGTCGACGGGGAGGAGGAGGGGGAGCGGGTGGAGGCGGCGAGGGCGGCCGGGGTGGTGCACGTGAGGGGGAAGATGAGGTTCCACGTCGGGAAGGACACGAGGCTGTTCGACCGGGTGCTGCTCGGGTTCTACGAGTTGCTGCACGGCGCGTGCCGCTCCGCGCTGCCGGCGCTCGGGATCCCGCTGCAGCAGCGCGTCGAGATCGGCATGCTCTACAAGGCCTAACGGCGCCGAACGCCACGCACGCGCCCCACGAATCCGTACGTACGTACGTGGCCATTAATTACCATTAGCAGTATAACCCCTATTATTAGTGTGGATATTATGGGTACCCCATACCCATACGGCATGGTTATCCGACCAGTCATAGGGGATAACTTATATCTATAGAATATGTAATAGATCATGACTCGGGTATT ]
[+] EMBL AK119564 [ AGTTTCAACCTCCCTTCTCCAACTTGCAATGTCTTCATCTCACACGGTGTCAGTCTCCATGGATGTTGAAGCCGGACAGAAAAACAAAGATAAGAAGGGGATCAGCCAAGATCCGATCCTGGCTTACAAGACTCTTGGTGTTGTTTTCGGTGGCCTTGTTACCTCACCACTCTACGTCTACCCATCCATGAATTTGACGAATCCTACTGAAGAAGACTACCTGGGAATATACAGCATCATGTTCTGGACCCTCACTCTCATTGGCGTAGTCAAGTACATATGCATCGCTCTCAACGCTGACGACCACGGCGAAGGTGGCACATTTGCCATGTATTCTCTGCTCTGTCAGCACGCAAACATTGGGATCCTTCCATCCAAGAAGATCTACACTGAAGAAGAGAACCTGATCTCGAATCAGCCTGTCGTAGCTGGAAGGCCTGGAAGACTGAGAAGGTTCATCGAAAGCAGCATAATCGCCAGGAGGCTGCTGCTGCTCACAGCCATCCTAGGCATGTGCATGCTCATCGGCGATGGCATCCTCACTCCTGCAATCTCAGTCTTGTCAGCGA TTGATGGACTCAGAGGCCCGTTCCCATCCGTCAGTAAACCTGCTG TGGA GGGCCTGTCGGCCGCGATTCTCGTTGGGCTGTTC TTGCTGCAGAAGTACGGCACGTCGAAGGTGAGCTTCATGTTCTCGCCGATCATGGCGGCGTGGACGTTCGCCACCCCGGTCATCGGCGTGTACAGCATCTGGCGCTACTACCCTGGCATCTTCAAAGCCATGTCGCCGCATTACATCGTCAGATTCTTCATGACGAACCAGACCAGAGGCTGGCAGCTACTCGGCGGCACCGTCCTCTGCATCACAGGTGCCGAGGCGATGTTCGCGGATCTTGGTCACTTCAGCAAGAGGTCCATCCAGATCGCGTTCATGTCGAGCATATACCCTTCGCTGGTGCTGACGTACGCCGGGCAGACGGCGTACCTGTTCAACAACGTCGACGACTTCAGCGACGGGTTCTACAAGTTCGTGCCGCGGCCGGTGTACTGGCCGATGTTCATCATCGCGACGCTGGCGGCGATCGTGGCGAGCCAGTCGCTGATCTCGGCCACCTTCTCCGTCATCAAGCAGTCGGTGGTGCTGGACTACTTCCCGCGGGTGAAGGTGGTGCACACGTCCAAGGACAAGGAAGGGGAGGTGTACTCGCCGGAGACCAACTACATGCTGATGCTGCTGTGCGTGGGCGTCATCCTCGGCTTCGGCGACGGCAAGGACATCGGCAACGCGTTCGGGGTGGTGGTGATCCTCGTGATGCTCATCACCACCATCCTGCTCACGCTGGTGATGCTCATCATCTGGGGCACCCACGTCGTGCTGGTGGCGCTCTACTTAGTGCCGTTCCTGCTCCTCGAGGCCACATACGTGAGCGCCGTGTGCACCAAGATCCTCCGCGGAGGGTGGGTGCCGTTCGCGGTGTCGGTGGCGCTGGCGGCGGTCATGTTCGGGTGGTACTACGGCCGGCAGCGGAAGACGGAGTACGAGGCGGCGAACAAGGTGACGCTGGAGCGGCTCGGCGAGCTGCTGTCCGGCCCCGGCTTGCGCCGCGTCCCGGGCCTCTGCTTCTTCTACAGCAACAGGCAGGACGGCGGGTGGCTCACCCCGGTGCTCGCGCACTACATCAGGAACATGCGGTCGCTGCACGAGGTGACCGTGTTCCTCACGCTCCGGTACCTGCTGGTGGCGAAGGTGGACGGCAAGGACAGGGTGCAGGCCGTGCGCCGGCTGGGGCCAGCGGGGGTGTACGGCTGCACGATCCAGTACGGGTACGCCGACGCGATCGACTTCGAGGAGGACGACATCGCCGGGCAGGTGGTGGGGGCGCTGCGGGAGCGGGTCGTCGACGGGGAGGAGGAGGGGGAGCGGGTGGAGGCGGCGAGGGCGGCCGGGGTGGTGCACGTGAGGGGGAAGATGAGGTTCCACGTCGGGAAGGACACGAGGCTGTTCGACCGGGTGCTGCTCGGGTTCTACGAGTTGCTGCACGGCGCGTGCCGCTCCGCGCTGCCGGCGCTCGGGATCCCGCTGCAGCAGCGCGTCGAGATCGGCATGCTCTACAAGGCCTAACGGCGCCGAACGCCACGCACGCGCCCCACGAATCCGTACGTACGTACGTGGCCATTAATTACCATTAGCAGTATAACCCCTATTATTAGTGTGGATATTATGGGTACCCCATACCCATACGGCATGGTTATCCGACCAGTCATAGGGGATAACTTATATCTATAGAATATGTAATAGATCATGACTCGGGTATTACGTTTCCTTATATATTACGGAACAGCCTAAAGTCCTGGTTTGATAATATTGTAAAGTAGATTTAGGAAACCGATACCGTATTGGTTAAGGTTTCTATCTTGTAATCCTGCCCCCCACCCTATATAAGGTGGGCAGGAGGCCCTCTAGGGGGCATGAGACAACCTGATCGTCAGATCTATAATACACCCGGCGGATTCAAATCCCCAAACAGGAGTAGGGTATTACCTCTCATTGAGAGGGCCC ]
[+] EMBL C71725 [ ATGCATCGCTCTCAACGCTGACGACCACGGCGAAGGTGGCACATTTGCCATGTATTCTCTGCTCTGTCAGCACGCAAACATTGGGATCCTTCCATCCAAGAAGATCTACACTGAAGAAGAGAACCTGATCTCGAATCAGCCTGTCGTAGCTGGAAGGCCTGGAAGACTGAGAAGGTTCATCGAAAGCAGCATAATCGCCAGGAGGCTGCTGCTGCTCACAGCCATCCTAGGCATGTGCATGCTCATCGGCGATGGCATCCTCACTCCTGCAATCTCAGTCTTGTCAGCGATTTGATGGACTCAGAGGCCCGTTNCCATCCGTCAGTAAACCTGCTGTTGGAGGGGCCTNTCGGCCGCGATTCTCGTTGGGCTGTTCTTTGCTNCAGAAGTACGGNA GTCGAAGGTGAG TTTATGTTCTCGCCG TCATGGGGGCGTn ]
[+] EMBL AF129485 [ TGCATCGCTCTCAACGCTGACGACCACGGCGAAGGTGGCACATTTGCCATGTATTCTCTGCTCTGTCAGCACGCAAACATTGGGATCCTTCCATCCAAGAAGATCTACACTGAAGAAGAGAACCTGATCTCGAATCAGCCTGTCGTAGCTGGAAGGCCTGGAAGACTGAGAAGGTTCATCGAAAGCAGCATAATCGCCAGGAGGCTGCTGCTGCTCACAGCCATCCTAGGCATGTGCATGCTCATCGGCGATGGCATCCTCACTCCTGCAATCTCAGTCTTGTCAGCGA TTGATGGACTCAGAGGCCCGTTCCCATCCGTCAGTAAACCTGCTG TGGA GGGCCTGTCGGCCGCGATTCTCGTTGGGCTGTTC TTGCTGCAGAAGTACGGCACGTCGAAGGTGAGCTTCATGTTCTCGCCGATCATGGCGGCGTGGACGTTCGCCACCCCGGTCATCGGCGTGTACAGCATCTGGCGCTACTACCCTGGCATCTTCAAAGCCATGTCGCCGCATTACATCGTCAGATTCTTCATGACGAACCAGACCAGAGGCTGGCAGCTACTCGGCGGCACCGTCCTCTGCATCACAGGTGCCGAGGCGATGTTCGCGGATCTTGGTCACTTCAGCAAGAGGTCCATCCAGATCGCGTTCATGTCGAGCATATACCCTTCGCTGGTGCTGACGTACGCCGGGCAGACGGCGTACCTGATCAACAACGTCGACGACTTCAGCGACGGGTTCTACAAGTTCGTGCCGCGGCCGGTGTACTGGCCGATGTTCATCATCGCGACGCTGGCGGCGATCGTGGCGAGCCAGTCGCTGATCTCGGCCACCTTCTCCGTCATCAAGCAGTCGGTGGTGCTGGACTACTTCCCGCGGGTGAAGGTGGTGCACACGTCCAAGGACAAAGAAAGGGAAGTGTACTCCCCGGAAAACAACTACATGCTGATGCTGCTGTGCGTGGGCGTCATCCTCCGGTTCCGCGAAAGGAAAGACATCGGCAACGCGTTCGGGGTGGTGGTGATCCTCGTGATGCTCATCACCACCATCCTGCTCACGCTGGTGATGCTCATCATCTGGGGCACCCACGTCGTGCTGGTGGCGCTCTACTTAGTGCCGTTCCTGCTCCTCGAGGCCACATACGTGAGCGCCGTGTGCACCAAGATCCTCCGCGGAGGGTGGGTGCCGTTCGCGGTGTCGGTGGCGCTGGCGGCGGTCATGTTCGGGTGGTACTACGGCCGGCAGCGGAAGACGGAGTACGAGGCGGCGAACAAGGTGACGCTGGAGCGGCTCGGCGAGCTGCTGTCCGGCCCCGGCTTGCGCCGCGTCCCGGGCCTCTGCTTCTTCTACAGCAACAGGCAGGACGGCGGGTGGCTCACCCCGGTGCTCGCGCACTACATCAGGAACATGCGGTCGCTGCACGAGGTGACCGTGTTCCTCACGCTCCGGTACCTGCTGGTGGCGAAGGTGGACGGCAAGGACAGGGTGCAGGCCGTGCGCCGGCTGGGGCCAGCGGGGGTGTACGGCTGCACGATCCAGTACGGGTACGCCGACGCGATCGACTTCGAGGAGGACGACATCTCCGGGCAGGTGGTGGGGGCGCTGCGGGAGCGGGTCGTCGACGGGGAGGAGGAGGGGGAGCGGGTGGAGGCGGCGAGGGCGGCCGGGGTGGTGCACGTGAGGGGGAAGATGAGGTTCCACGTCGGGAAGGACACGAGGCTGTTCGACCGGGTGCTGCTCGGGTTCTACGAGTTGCTGCACGGCGCGTGCCGCTCCGCGCTGCCGGCGCTCGGGATCCCGCTGCAGCAGCGCGTCGAGATCGGCATGCTCTACAAGGCCTAACGGCGCCGAACGCCACGCACGCGCCCCACGAATCCGTACGTACGTACGTGGCCATTAATTACCATTAGCAGTATAACCCCTATTATTAGTGTGGATATTATGGGTACCCCATACCCATACGGCATGGTTATCCGACCAGTCATAGGGGATAACTTATATCTATAGAATATGTAATAGATCATGACTCGGGTATTACGTTTCCTTATATATTACGGAACAGCCTAAAGTCCTGGTTTGATAATATTGTAAAGTAGATTTAGGAAACCGATACCGTATTGGTTAAGGTTTCTATCTTGTAATCCTGCCCCCCACCCTATATAAGGTGGGCAGGAGGCCCTCTAGGGGGCATGAGACAACCTGATCGTCAGATCTATAATACACCCGGCGGATTCAAATCCCCAAACAGGAGTAGGGTATTACCTCTCATTGAGAGGGCCCGAACCTGTCTAAAAAAAAAAAA ]
[+] EMBL C98429 [ CGGAACAGCCTAAAGTCCTGGTTTGATAATATTGTAAAGTAGATTTAGGAAACCGATACCGTATTGGTTAAGGTTTCTATCTTGTAATCCTGCCCCCCACCCTATATAAGGTGGGCAGGAGGCCCTCTAGGGGGCATGAGACAACCTGATCGTCAGATCTATAATACACCCGGCGGATTCAAATCCCCAAACAGGAGTAGGGTNTTACCTCTNATTGAGAGGGCCCGAACCTGTCTAAAAAAAAAAAANAAAAAAAAANNAAAAAAAAAAAAAAANNNAAAAAANAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||