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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8235#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3354 fasta sequence
[TTCCAATTTCAACCAAACTTCTAATTAGTTCATGAACTAAACACACCCTTATACATGTGTAACATGTCCAATTTGCGGGTCTTCTCAAAGGTCGTCAGAACTGGAGCAATTACTATACATGTGTGCCAACTTGGGGGGTATTCTGCAGTTATCATGTACTACACGTCTTCCATTCCCACTACAATGTTTAGGCAACAGCCAGCAGCCCTTTCAACCAATGATACATGACCCCAGTCCTTCTGACAGTCGTCTAAAATTCAAGAAATCTACCACCCTCTACTGATTTCACCGTGTCGTGTCTTTTTAAGTGGATAAAGCACAGCACTTGCGAAAATACCTTCACCACCATGTCGTCGTTCTCCAAGAGAGTCCCTCACCATGTGGCATCACTCCTAGCAATGATGCTCATCCTCCAGCTAGTCCAGGCCACCACGCTCGACGACCTTACGACGACCTCCTCCGAAACGACGCCGGCAAT-GTGCCTTCCAGACCAGGCTTCCGCGCTGCTCCGGCTGAAGCACTCCTTCAACGCGACGGCCGGCGACTACTCCACCACCTTTCGATCATGGGTCCCTGGTGCAGACTGCTGTCGCTGGGAGGGCGTCCACTGCGACGGCGCCGATGGCCGTGTCACCTCACTCGACTTGGGAGGCCACAACCTGCAAGCCGGCGGCCTCGACCATGCACTGTTCAGGTTAACCTCACTCAAGCACCTCAACCTCTCTGGTAACATCTTCACCATGTCCCAGCTCCCGGCCACTGGATTCGAGCAGCTCACCGAGCTCACACACCTTGACCTCTCGGACACCAACATCGCCGGCAAGGTGCCGGCTGGCATTGGGCGCCTCGTGAGCCTGGTCTACCTCGACCTCTCCACGAGCTTCGTCATCGTGTCTTACGATGACGAAAACAGCATCACACAGTACGCTGTAGACTCCATTGGGCAGCTCTCAGCACCAAACATGGAGACCTTGCTCACAAACCTCACTAACCTGGAGGAGCTCCATATGGGAATGGTGGATATGTCCAATAATGGCGAATTGTGGTGTGACCACATAGCCAAGTACACACCTAAGCTTCAAGTTCTTAGTTTACCTTACTGCTCACTGTCAGGTCCCGTATGCGCATCATTTGCTGCCATGCGATCGCTCACCACGATCGAGCTTCATTACAATTTATTGTCAGGTTCAGTGCCAGAGTTCTTGGCTGGCTTTTCCAACCTCACTGTTCTTCAGCTATCCACAAACAAGTTTCAAGGATGGTTTCCTCCCATCATCTTCCAGCACAAGAAGTTGAGAACAATTGATCTTTCTAAGAATCCTGGCATATCTGGTAATCTGCCAAATTTCTCACAGGACAGTAGCTTGGAGAATTTGTCCGTCAGTAGAACAAACTTCACAGGTATGATTCCGAGCTCCATCAGCAATCTCAGATCTCTGAAGAAGTTGGGCATTGGTGCAAGTGGTTTCTCTGGAACACTGCCCTCTTCGTTAGGTAGCTTCCTATACTTGGATTTGCTAGAAGTGTCTGGGTTCCAGATAGTAGGATCCATGCCGTCATGGATATCCAACCTAACTTCTCTTACTGTTCTCCAGTTCTCCAACTGCGGATTGTCTGGACATGTACCTTCTTCAATAGGAAACTTAAGGGAATTGATTAAGTTAGCACTGTACAACTGCAAGTTTTCAGGGAAGGTGCCTCCGCAGATCTTAAATTTGACTCATTTGGAAACTCTCGTGCTCCATTCGAACAATTTTGACGGCACAATAGAACTCACCTCATTCTCAAAACTGAAAAACCTATCCGTCCTGAATCTCTCAAACAATAAACTAGTAGTGGTAGATGGAGAAAATATTTCATCACTGGTGTCATTCCCCAATTTGGAGTTCTTAAGTTTAGCATCTTGCAGCATGTCTACTTTTCCCAATATCTTGAAGCATCTCGATAAGATGTTTAGTCTTGACATTTCACATAACCAGATCCAAGGAGCTATACCACAGTGGGCATGGAAGACATGGAAAGGCTTGCAATTTCTCCTCTTGAACATGTCGCACAATAACTTTACAAGTCTTGGATCTGATCCTTTGCTTCCTCTTCATATAGAATTCCTTGACCTCAGTTTCAACAGTATTGAAGGGCCCATACCGATACCACAAGAAGGTAGCAGCACATTAGATTACTCGAGCAACCAATTCTCATCTATTCCTCTTCATTACTTAACTTACCTTGGGGAAACTCTCACTTTCAAGGCCTCCAGAAACAAACTCTCTGGAGATATTCCACCATCAATATGTACCGCTGCTACGAATTTGCAACTCTTTGATCTCTCTTACAATAACTTGAGTGGTTCGATCCCATCCTGCTTAATGGAGGATGCCATTGAATTACAAGTATTAAGTCTAAAAGAAAATAAACTTGTTGGAAATTTACCTGATAGCATCAAGGAAGGCTGTTCACTTGAGGCAATAGATTTAAGTGGCAATTTGATTGACGGAAAGATACCCAGATCTCTAGTTTCTTGCAGGAACTTGGAGATCCTTGACGTTGGAAACAATCAGATTAGTGACTCCTTTCCATGTTGGATGAGTAAACTTCGTAAACTTCAAGTCCTTGTCCTCAAGTCTAACAAGTTCACTGGACAAGTAATGGATCCTTCATATACAGTTGACAGGAACAGCTGTGCATTTACGCAGCTCAGAATTGCTGACATGGCCTCAAACAACTTCAATGGAACATTGCCAGAAGCATGGTTTAAGATGCTCAAGTCCATGATTGCCATGACTCAAAATGATACACTAGTCATGGAAAATAAATATTACCATGGGCAAACATACCAGTTTACTGCCTCAGTTACATACAAAGGGAGTGACACGACAATTTCCAAGATATTGAGGACCCTTATGCTGATTGATTTCTCAAATAATGCATT-CCATGGTACCATTCCTGAGACTGTCGGGGGGCTTGTACTGCTTCACGGGCTCAACATGTCTCACAATGCCCTTACAGGATCAATTCCAACTCAGTTTGGCAGGTTGAATCAACTTGAGTCATTGGACCTCTCCTCGAATGAGCTCACTGGGGGGATCCCCAAGGAGCTAGCATCACTCAACTTCCTTTCAACACTGAATTTGTCCTACAACATGTTGGTTGGAAGAATACCAAACTCATATCAGTTTTCCACCTTTTCCAACAATTCTTTTCTTGGAAACATTGGTTTGTGTGGACCACCGTTATCCAAACAATGTGACAACCCAAAAGAGCCCATTGTTATGACATACACTTCGGAGAAATCCACAGATGTTGTACTAGTCCTCTTCACTGCATTGGGATTTGGTGTTTCCTATGCAATGACAA]
[-] EMBL AK106666 [TTCCAATTTCAACCAAACTTCTAATTAGTTCATGAACTAAACACACCCTTATACATGTGTAACATGTCCAATTTGCGGGTCTTCTCAAAGGTCGTCAGAACTGGAGCAATTACTATACATGTGTGCCAACTTGGGGGGTATTCTGCAGTTATCATGTACTACACGTCTTCCATTCCCACTACAATGTTTAGGCAACAGCCAGCAGCCCTTTCAACCAATGATACATGACCCCAGTCCTTCTGACAGTCGTCTAAAATTCAAGAAATCTACCACCCTCTACTGATTTCACCGTGTCGTGTCTTTTTAAGTGGATAAAGCACAGCACTTGCGAAAATACCTTCACCACCATGTCGTCGTTCTCCAAGAGAGTCCCTCATCATGTGGCATCACTCCTAGCAATGATGCTCATCCTCCAGCTAGTCCAGGCCACCACGCTCGACGACCTTACGACGACCTCCTCCGAAACGACGCCGGCAAT GTGCCTTCCAGACCAGGCTTCCGCGCTGCTCCGGCTGAAGCACTCCTTCAACGCGACGGCCGGCGACTACTCCACCACCTTTCGATCATGGGTCCCTGGTGCAGACTGCTGTCGCTGGGAGGGCGTCCACTGCGACGGCGCCGATGGCCGTGTCACCTCACTCGACTTGGGAGGCCACAACCTGCAAGCCGGCGGCCTCGACCATGCACTGTTCAGGTTAACCTCACTCAAGCACCTCAACCTCTCTGGTAACATCTTCACCATGTCCCAGCTCCTGGCCACTGGATTCGAGCAGCTCACCGAGCTCACACACCTTGACCTCTCGGACACCAACATCGCCGGCAAGGTGCCGGCTGGCATTGGGCGCCTCGTGAGCCTGGTCTACCTCGACCTCTCCACGAGCTTCGTCATCGTGTCTTACGATGACGAAAACAGCATCACACAGTACGCTGTAGACTCCATTGGGCAGCTCTCAGCACCAAACATGGAGACCTTGCTCACAAACCTCACTAACCTGGAGGAGCTCCATATGGGAATGGTGGATATGTCCAATAATGGCGAATTGTGGTGTGACCACATAGCCAAGTACACACCTAAGCTTCAAGTTCTTAGTTTACCTTACTGCTCACTGTCAGGTCCCGTATGCGCATCATTTGCTGCCATGCGATCGCTCACCACGATCGAGCTTCATTACAATTTATTGTCAGGTTCAGTGCCAGAGTTCTTGGCTGGCTTTTCCAACCTCACTGTTCTTCAGCTATCCACAAACAAGTTTCAAGGATGGTTTCCTCCCATCATCTTCCAGCACAAGAAGTTGAGAACAATTGATCTTTCTAAGAATCCTGGCATATCTGGTAATCTGCCAAATTTCTCACAGGACAGTAGCTTGGAGAATTTGTCCGTCAGTAGAACAAACTTCACAGGTATGATTCCGAGCTCCATCAGCAATCTCAGATCTCTGAAGAAGTTGGGCATTGGTGCAAGTGGTTTCTCTGGAACACTGCCCTCTTCGTTAGGTAGCTTCCTATACTTGGATTTGCTAGAAGTGTCTGGGTTCCAGATAGTAGGATCCATGCCGTCATGGATATCCAACCTAACTTCTCTTACTGTTCTCCAGTTCTCCAACTGCGGATTGTCTGGACATGTACCTTCTTCAATAGGAAACTTAAGGGAATTGATTAAGTTAGCACTGTACAACTGCAAGTTTTCAGGGAAGGTGCCTCCGCAGATCTTAAATTTGACTCATTTGGAAACTCTCGTGCTCCATTCGAACAATTTTGACGGCACAATAGAACTCACCTCATTCTCAAAACTGAAAAACCTATCCGTCCTGAATCTCTCAAACAATAAACTAGTAGTGGTAGATGGAGAAAATATTTCATCACTGGTGTCATTCCCCAATTTGGAGTTCTTAAGTTTAGCATCTTGCAGCATGTCTACTTTTCCCAATATCTTGAAGCATCTCGATAAGATGTTTAGTCTTGACATTTCACATAACCAGATCCAAGGAGCTATACCACAGTGGGCATGGAAGACATGGAAAGGCTTGCAATTTCTCCTCTTGAACATGTCGCACAATAACTTTACAAGTCTTGGATCTGATCCTTTGCTTCCT ]
[+] EMBL AK103606 [ CACCATGTCGTCGTTCTCCAAGAGAGTCCCTCACCATGTGGCATCACTCCTAGCAATGATGCTCATCCTCCAGCTAGTCCAGACCACCACGCTCGACGACCTTACGACGACCTCCTCCGAAACGACGCCGGCAAT GTGCCTTCCAGACCAGGCTTCCGCGCTGCTCCGGCTGAAGCACTCCTTCAACGCGACGGCCGGCGACTACTCCACCACCTTTCGATCATGGGTCCCTGGTGCAGACTGCTGTCGCTGGGAGGGCGTCCACTGCGACGGCGCCGATGGCCGTGTCACCTCACTCGACTTGGGAGGCCACAACCTGCAAGCCGGCGGCCTCGACCATGCACTGTTCAGGTTAACCTCACTCAAGCACCTCAACCTCTCTGGTAACATCTTCACCATGTCCCAGCTCCCGGCCACTGGATTCGAGCAGCTCACCGAGCTCACACACCTTGACCTCTCGGACACCAACATCGCCGGCAAGGTGCCGGCTGGCATTGGGCGCCTCGTGAGCCTGGTCTACCTCGACCTCTCCACGAGCTTCGTCATCGTGTCTTACGATGACGAAAACAGCATCACACAGTACGCTGTAGACTCCATTGGGCAGCTCTCAGCACCAAACATGGAGACCTTGCTCACAAACCTCACTAACCTGGAGGAGCTCCATATGGGAATGGTGGATATGTCCAATAATGGCGAATTGTGGTGTGACCACATAGCCAAGTACACACCTAAGCTTCAAGTTCTTAGTTTACCTTACTGCTCACTGTCAGGTCCCGTATGCGCATCATTTGCTGCCATGCGATCGCTCACCACGATCGAGCTTCATTACAATTTATTGTCAGGTTCAGTGCCAGAGTTCTTGGCTGGCTTTTCCAACCTCACTGTTCTTCAGCTATCCACAAACAAGTTTCAAGGATGGTTTCCTCCCATCATCTTCCAGCACAAGAAGTTGAGAACAATTGATCTTTCTAAGAATCCTGGCATATCTGGTAATCTGCCAAATTTCTCACAGGACAGTAGCTTGGAGAATTTGTCCGTCAGTAGAACAAACTTCACAGGTATGATTCCGAGCTCCATCAGCAATCTCAGATCTCTGAAGAAGTTGGGCATTGGTGCAAGTGGTTTCTCTGGAACACTGCCCTCTTCGTTAGGTAGCTTCCTATACTTGGATTTGCTAGAAGTGTCTGGGTTCCAGATAGTAGGATCCATGCCGTCATGGATATCCAACCTAACTTCTCTTACTGTTCTCCAGTTCTCCAACTGCGGATTGTCTGGACATGTACCTTCTTCAATAGGAAACTTAAGGGAATTGATTAAGTTAGCACTGTACAACTGCAAGTTTTCAGGGAAGGTGCCTCCGCAGATCTTAAATTTGACTCATTTGGAAACTCTCGTGCTCCATTCGAACAATTTTGACGGCACAATAGAACTCACCTCATTCTCAAAACTGAAAAACCTATCCGTCCTGAATCTCTCAAACAATAAACTAGTAGTGGTAGATGGAGAAAATATTTCATCACTGGTGTCATTCCCCAATTTGGAGTTCTTAAGTTTAGCATCTTGCAGCATGTCTACTTTTCCCAATATCTTGAAGCATCTCGATAAGATGTTTAGTCTTGACATTTCACATAACCAGATCCAAGGAGCTATACCACAGTGGGCATGGAAGACATGGAAAGGCTTGCAATTTCTCCTCTTGAACATGTCGCACAATAACTTTACAAGTCTTGGATCTGATCCTTTGCTTCCTCTTCATATAGAATTCCTTGACCTCAGTTTCAACAGTATTGAAGGGCCCATACCGATACCACAAGAAGGTAGCAGCACATTAGATTACTCGAGCAACCAATTCTCATCTATTCCTCTTCATTACTTAACTTACCTTGGGGAAACTCTCACTTTCAAGGCCTCCAGAAACAAACTCTCTGGAGATATTCCACCATCAATATGTACCGCTGCTACGAATTTGCAACTCTTTGATCTCTCTTACAATAACTTGAGTGGTTCGATCCCATCCTGCTTAATGGAGGATGCCATTGAATTACAAGTATTAAGTCTAAAAGAAAATAAACTTGTTGGAAATTTACCTGATAGCATCAAGGAAGGCTGTTCACTTGAGGCAATAGATTTAAGTGGCAATTTGATTGACGGAAAGATACCCAGATCTCTAGTTTCTTGCAGGAACTTGGAGATCCTTGACGTTGGAAACAATCAGATTAGTGACTCCTTTCCATGTTGGATGAGTAAACTTCGTAAACTTCAAGTCCTTGTCCTCAAGTCTAACAAGTTCACTGGACAAGTAATGGATCCTTCATATACAGTTGACAGGAACAGCTGTGCATTTACGCAGCTCAGAATTGCTGACATGGCCTCAAACAACTTCAATGGAACATTGCCAGAAGCATGGTTTAAGATGCTCAAGTCCATGATTGCCATGACTCAAAATGATACACTAGTCATGGAAAATAAATATTACCATGGGCAAACATACCAGTTTACTGCCTCAGTTACATACAAAGGGAGTGACACGACAATTTCCAAGATATTGAGGACCCTTATGCTGATTGATTTCTCAAATAATGCATT CCATGGTACCATTCCTGAGACTGTCGGGGGGCTTGTACTGCTTCACGGGCTCAACATGTCTCACAATGCCCTTACAGGATCAATTCCAACTCAGTTTGGCAGGTTGAATCAACTTGAGTCATTGGACCTCTCCTCGAATGAGCTCACTGGGGGGATCCCCAAGGAGCTAGCATCACTCAACTTCCTTTCAACACTGAATTTGTCCTACAACATGTTGGTTGGAAGAATACCAAACTCATATCAGTTTTCCACCTTTTCCAACAATTCTTTTCTTGGAAACATTGGTTTGTGTGGACCACCGTTATCCAAACAATGTGACAACCCAAAAGAGCCCATTGTTATGACATACACTTCGGAGAAATCCACAGATGTTGTACTAGTCCTCTTCACTGCATTGGGATTTGGTGTTTCCTATGCAATGACAA]
[+] EMBL CB635271 [ CAAGAGAGTCCCTCACCATGTGGCATCACTCCTAGCAATGATGCTCATCCTCCAGCTAGTCCAGGCCACCACGCTCGACGACCTTACGACGACCTCCTCCGAAACGACGCCGGCAATGGTGCCTTCCAGACCAGGCTTCCGCGCTGCTCCGACTGAAGCGCTCCTTCAACGCGACGGCCGGCGACTACTCCACCACCTTTCGATCATGGATCCCTGGTTCAGACTGCTGTCGCTGGGAGAGCGTCCACTGCGACGGCGCCGATGGCCGTGTCACCTCACTCGACTTGGGAGGCCACAACCTGCAAGCCGGCGGCCTCGACCATGCACTGTTCAGGTTAACCTCACTCAAGCACCTCAACCTCTCTGGTAACATCTTCACCATGTCCCAGCTCCCGGCCACTGGATTCGAGCAGCTCACCGAGCTCACACACCTTGACCTCTCGGACACCAACATCGCCGGCAAGGTGCCGGCTGGCATTGGGCGCCTCGTGAGCCTGGTCTACCTCGACCTCTCCACGAGCTTCGTCATCGTGTCTTACGATGACGAAAACAGCATCACACGGTACGCTACACACTCCATTGGGCAGCTCTCAGCGCCAAACATGGAGACCTTGCTCACAAACCTCACCAACCTGGAGGAGCTCCATATGGGAATGGTGGATATGTCCAATAATGGCGAATTGTGGTGTGACCACATAGCCAAGTACACACCTAAGCTTCAAGTTCTTAGTTTACCTTACTGCTCACTGTCAGGTCCCGTATGCGCATCATTTGCTGCCA ]
[+] EMBL CB635173 [ GCTGTCGCTGGGAGAGCGTCCACTGCGACGGCGCCGATGGCCGTGTCACCTCACTCGACTTGGGAGGCCACAACCTGCAAGCCGGCGGCCTCGACCATGCACTGTTCAGGTTAACCTCACTCAAGCACCTCAACCTCTCTGGTAACATCTTCACCATGTCCCAGCTCCCGGCCACTGGATTCGAGCAGCTCACCGAGCTCACACACCTTGACCTCTCGGACACCAACATCGCCGGCAAGGTGCCGGCTGGCATTGGGCGCCTCGTGAGCCTGGTCTACCTCGACCTCTCCACGAGCTTCGTCATCGTGTCTTACGATGACGAAAACAGCATCACACGGTACGCTACACACTCCATTGGGCAGCTCTCAGCGCCAAACATGGAGACCTTGCTCACAAACCTCACCAACCTGGAGGAGCTCCATATGGGAATGGTGGATATGTCCAATAATGGCGAATTGTGGTGTGACCACATAGCCAAGTACACACCTAAGCTTCAAGTTCTTAGTTTACCTTACTGCTCACTGTCAGGTCCCGTATGCGCATCATTTGCTGCCATGCGATCGCTCACCACGATCGAGCTTCATTACAATTTATTGTCAGGTTCAGTGCCAGAGTTCTTGGCTGGCTTTTCCAACCTCACTGTTCTTCAGCTATCCACAAACAACTTTCAAGGATGGTTTCCTCCCATCATCTTCCAGCACAAGAAGTTGAGAACAATTGATCTTTCTAAGAATCCTGGCATATCTGGTAATCTGCCAAATTTCTCACAGGACAGTAGCTTGGAGAATTTGTTCGTCAGTAGAACAAA ]
[-] EMBL CB635174 [ ACCGCTGCTACGAATTTGCAACTCTTTGATCTCTCTTACAATAACTTGAGTGGTTCGATCCCATCCTGCTTAATGGAGGATGCCATTGAATTACAAGTATTAAGTCTAAAAGAAAATAAACTTGTTGGAAATTTACCTGATAGCATCAAGGAAGGCTGTTCACTTGAGGCAATAGATTTAAGTGGCAATTTGATTGACGGAAAGATACCCAGATCTCTAGTTTCTTGCAGGAACTTGGAGATCCTTGACGTTGGAAACAATCAGATTAGTGACTCCTTTCCATGTTGGATGAGTAAACTTTGTAAACTTCAAGTCCTTGTCCTCAAGTCTAACAAGTTCACTGGACAAGTAATGGATCCTTCATATACAGTTGACAGGAACAGCTGTGCATTTACGCAGCTCAGAATTGCTGACATGGCCTCAAACAACTTCAATGGAACATTGCCAGAAGCATGGTTTAAGATGCTCAAGTCCATGATTGCCATGACTCAAAATGATACACTAGTCATGGAAAATAAATATTACCATGGGCAAACATACCAGTTTACTGCCTCAGTTACATACAAAGGGAGTGACATGACAATTTCCAAGATATTGAGGACCCTTATGCTGATTGATTTCTCAAATAATGCATTGGCATGGTACCATTCCTGAGACTGTCGGGGGGCTTGTACTGCTTCACGGGCTCAACATGTCTCACAATTCTCGAAGAGGATCAATTCCAACTCAG ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||