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Oryza sativa
cluster # 8262 cluster # 8262       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8262#0 length = 2501 sequences # 3  
consensus_8262#1 length = 378 sequences # 2  

consensusID : consensus_8262#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2501
fasta sequence
                              [CCTTTTTCGTAACTGGCTCTCTCCTCCTCTGCTCCACTGCTGCTCCGCCTCTGCTCGTGTGAGCCCCCAGCCTCCATTCCTGCCTGCCTGCCTGCCTCCTGCTGCTCCTCCCCGGATCGAAATCGATCTCTCCTCTTCCTCCTCCTCCTCCTCTTCTCCATCTCTCCAGATTCCACAAGCCACGCGGGATATGCTGCTCTGATTGATCTCTCTCCACGTCGGGTCAGGTCTTCACCCTTGAGGGAATTGTTTTCATTATCTTATCAAAATGGAGAAAATGCAAAAGACGCAATCAAGGAAATCCAGCTCATGGTGGTGGGATAGCCATATTAGTCCAAAAAGTTCTAAGTGGCTCTCCGATAACTTAGAAGTGATGGAGACACAGATAAAAGAAACGCTGGAGCTTATTGAGGAAGGAGAACCCTCTGCAGAAAAGGCTGGGGTTCTTATTACTCACGTACAGAACTTTCAGCAGATGTATCGTGTTCTTGCCAAGCGATATGGCAATGTGACTGGAGAATTGCGCAAAAATATCCCATCATCTCTGCAATCATCTGTCTCCTTTGGCATCTCAGAATCAGATTCTGAGGCACAGTCTCCTTCATCACCAGAGCGTGACTTGCAAGAGAAGATGTCACAAAAGCAAAAACCGCGATCAGATTGCTTTGATGTTTCTATTGGCTCTGGTATGAGTTCTGACGTATCCAAGAAGGGGAGTGATGGGTCTTCATCATCTTCAGAATCTGATTTAGAGCTTGATGAGGCTAAAGAAGAAAATGGCAATAGCATTTTTTATGCCCTAAGTCAAAAAATTATTGAGCTTGAGGATGAGCTTCATGAAGTAAGGGGTAAACTTGATGCTTCCGAGGAAAAGAACATGCGTTGCCATTGTAATTTTGGTGCTAACTCAGAACTGTCTGAACATGAGGAAAAGCAACAGGTTTCAGATGTGGAAACCAGTAGCCTTCAGAAGGATCTTGATGAAGTCAAAAGTGAAAAGGAAGCATTGGAAGCTGTTGTATTGGTGAACAAAGATGAAATTGATAGGCTGAAGGAATCAATGGTATCGGCAGCCAAGCAGTTTGAAGTTGAACTTGCGCATCGTGATACTGAAATTGATAAGTGCAAACAGGAGCTTGAGGTACTTTCGGAGAAGTATCTGCATGATATATCTGCTCTTGAGGCTGAAATTGGAAAGCTCCAGGGAGTCATCAAAACCTTTGAAGACGACTTTGCAAAAATATCACAGGAGAAATTGATGCTCGAATCTCGGGTTGAAGAGCTTGAGCAGTCAGTTAACAGCTCAAATTATTCGGTTTCTGAGATGGTTAATCTGCAAGAACTAATGAAGGATACACAAGCAGAATTAGAAAAGGTTTCACAGGAGAAAGAAGTGCTCAGAGAACGTGTTCTTGAATTTGAGCAACTTTTGGGGGACTTTGAGAATTCAGGCATGGAGGTTGCAAAGCTACCAGAAACCATCAAGAACTTGGGAGCCCAGATAGAGGGAACACTACAGGAGAAATCAGTACTCCAGGACAGGATTAAGGAGCTGGAGCAGGCTGTCCATGATTCATTGCAGAACCATTCACTGGAGAAGTCCTCTCTGAGTGCTGAGCTTTCAAAATTATCTGAAGCCAATGCTTCTCTTGAAGCCAAGTTGGCATCCGTGGAGGCAGAGCTCAAACAAGTTTACGACGAAAAGGCTAATGAATCCCTCAACAGCGAGAAGGAAATCTCCAGGCTGAATCAAGAACTGGCCAATGTCAAAACCGATCTGGAATTGCTGTTATCCGAGAAATCCCTGGTGGACAACAAAGTAACCACTCTACTAACCGACATCACAACTCGCGATGAAAAGATGAAGCAGATGGATGATCAACTGAATCAGCTTCAGCTTGAGCATTCCAAGCTAATGGCACAGGCCGATCTTGCCCGCAAGTCCCTGTCAGAACTGCATGCTCGGGTATGCGAGCTCGAGAAAGAGGTAGAGATGCAGAAGCTTGTGATCTCTGAGAGCGCCGAGGGGAAGCGCGAGGCGATCAGGCAACTGTGCTTCTCACTCGAGCACTACCGCAGCGGCTACCAGGAGCTGCGGCAGCTGCTGCATGACCAGAAGAGACCACTGGTGATGGCAACATGAACCAAAGCTAGTGATCCTGATGCCATCCTTCTCGGATGCTTTGTGGATGTTTTCTGTCAATGGCAATGCATGCTTTCCTGTGTCTCTCTCTCTCTCTCTTCTACCAGTAGCTTGCTGCTGCTCTATAACTTGTGCACTGTTGCTTCTCCGGCTACTAAGAATTCTGTGTTGTGTCTTGCAATGTGATGGGATAATCAATATCGTTTCTTGTGTACTCTTATAACTGTCGTCAGGTAATGGGCATAGTGATGTCTATCAATCTATGCTTGATCTTTGAAAGATGATATGCATATCAGCTGTCAACTTTGTCAAATGTGTGGATTATCCTTGTGCTTTCCAATCCAATCAATGATGAGTT]

[+] EMBL AK101183             [CCTTTTTCGTAACTGGCTCTCTCCTCCTCTGCTCCACTGCTGCTCCGCCTCTGCTCGTGTGAGCCCCCAGCCTCCATTCCTGCCTGCCTGCCTGCCTCCTGCTGCTCCTCCCCGGATCGAAATCGATCTCTCCTCTTCCTCCTCCTCCTCCTCTTCTCCATCTCTCCAGATTCCACAAGCCACGCGGGATATGCTGCTCTGATTGATCTCTCTCCACGTCGGGTCAGGTCTTCACCCTTGAGGGAATTGTTTTCATTATCTTATCAAAATGGAGAAAATGCAAAAGACGCAATCAAGGAAATCCAGCTCATGGTGGTGGGATAGCCATATTAGTCCAAAAAGTTCTAAGTGGCTCTCCGATAACTTAGAAGTGATGGAGACACAGATAAAAGAAACGCTGGAGCTTATTGAGGAAGGAGAACCCTCTGCAGAAAAGGCTGGGGTTCTTATTACTCACGTACAGAACTTTCAGCAGATGTATCGTGTTCTTGCCAAGCGATATGGCAATGTGACTGGAGAATTGCGCAAAAATATCCCATCATCTCTGCAATCATCTGTCTCCTTTGGCATCTCAGAATCAGATTCTGAGGCACAGTCTCCTTCATCACCAGAGCGTGACTTGCAAGAGAAGATGTCACAAAAGCAAAAACCGCGATCAGATTGCTTTGATGTTTCTATTGGCTCTGGTATGAGTTCTGACGTATCCAAGAAGGGGAGTGATGGGTCTTCATCATCTTCAGAATCTGATTTAGAGCTTGATGAGGCTAAAGAAGAAAATGGCAATAGCATTTTTTATGCCCTAAGTCAAAAAATTATTGAGCTTGAGGATGAGCTTCATGAAGTAAGGGGTAAACTTGATGCTTCCGAGGAAAAGAACATGCGTTGCCATTGTAATTTTGGTGCTAACTCAGAACTGTCTGAACATGAGGAAAAGCAACAGGTTTCAGATGTGGAAACCAGTAGCCTTCAGAAGGATCTTGATGAAGTCAAAAGTGAAAAGGAAGCATTGGAAGCTGTTGTATTGGTGAACAAAGATGAAATTGATAGGCTGAAGGAATCAATGGTATCGGCAGCCAAGCAGTTTGAAGTTGAACTTGCGCATCGTGATACTGAAATTGATAAGTGCAAACAGGAGCTTGAGGTACTTTCGGAGAAGTATCTGCATGATATATCTGCTCTTGAGGCTGAAATTGGAAAGCTCCAGGGAGTCATCAAAACCTTTGAAGACGACTTTGCAAAAATATCACAGGAGAAATTGATGCTCGAATCTCGGGTTGAAGAGCTTGAGCAGTCAGTTAACAGCTCAAATTATTCGGTTTCTGAGATGGTTAATCTGCAAGAACTAATGAAGGATACACAAGCAGAATTAGAAAAGGTTTCACAGGAGAAAGAAGTGCTCAGAGAACGTGTTCTTGAATTTGAGCAACTTTTGGGGGACTTTGAGAATTCAGGCATGGAGGTTGCAAAGCTACCAGAAACCATCAAGAACTTGGGAGCCCAGATAGAGGGAACACTACAGGAGAAATCAGTACTCCAGGACAGGATTAAGGAGCTGGAGCAGGCTGTCCATGATTCATTGCAGAACCATTCACTGGAGAAGTCCTCTCTGAGTGCTGAGCTTTCAAAATTATCTGAAGCCAATGCTTCTCTTGAAGCCAAGTTGGCATCCGTGGAGGCAGAGCTCAAACAAGTTTACGACGAAAAGGCTAATGAATCCCTCAACAGCGAGAAGGAAATCTCCAGGCTGAATCAAGAACTGGCCAATGTCAAAACCGATCTGGAATTGCTGTTATCCGAGAAATCCCTGGTGGACAACAAAGTAACCACTCTACTAACCGACATCACAACTCGCGATGAAAAGATGAAGCAGATGGATGATCAACTGAATCAGCTTCAGCTTGAGCATTCCAAGCTAATGGCACAGGCCGATCTTGCCCGCAAGTCCCTGTCAGAACTGCATGCTCGGGTATGCGAGCTCGAGAAAGAGGTAGAGATGCAGAAGCTTGTGATCTCTGAGAGCGCCGAGGGGAAGCGCGAGGCGATCAGGCAACTGTGCTTCTCACTCGAGCACTACCGCAGCGGCTACCAGGAGCTGCGGCAGCTGCTGCATGACCAGAAGAGACCACTGGTGATGGCAACATGAACCAAAGCTAGTGATCCTGATGCCATCCTTCTCGGATGCTTTGTGGATGTTTTCTGTCAATGGCAATGCATGCTTTCCTGTGTCTCTCTCTCTCTCTCTTCTACCAGTAGCTTGCTGCTGCTCTATAACTTGTGCACTGTTGCTTCTCCGGCTACTAAGAATTCTGTGTTGTGTCTTGCAATGTGATGGGATAATCAATATCGTTTCTTGTGTACTCTTATAACTGTCGTCAGGTAATGGGCATAGTGATGTCTATCAATCTATGCTTGATCTTTGAAAGATGATATGCATATCAGCTGTCAACTTTGTCAAATGTGTGGATTATCCTTGTGCTTTCCAATCCAATCAATGATGAGTT]
[+] EMBL AK101173             [                                           TCCGCCTCTGCTCGTGTGAGCCCCCAGCCTCCATTCCTGCCTGCCTGCCTGCCTCCTGCTGCTCCTCCCCGGATCGAAATCGATCTCTCCTCTTCCTCCTCCTCCTCCTCTTCTCCATCTCTCCAGATTCCACAAGCCACGCGGGATATGCTGCTCTGATTGATCTCTCTCCACGTCGGGTCAGGTCTTCACCCTTGAGGGAATTGTTTTCATTATCTTATCAAAATGGAGAAAATGCAAAAGACGCAATCAAGGAAATCCAGCTCATGGTGGTGGGATAGCCATATTAGTCCAAAAAGTTCTAAGTGGCTCTCCGATAACTTAGAAGTGATGGAGACACAGATAAAAGAAACGCTGGAGCTTATTGAGGAAGGAGAACCCTCTGCAGAAAAGGCTGGGGTTCTTATTACTCACGTACAGAACTTTCAGCAGATGTATCGTGTTCTTGCCAAGCGATATGGCAATGTGACTGGAGAATTGCGCAAAAATATCCCATCATCTCTGCAATCATCTGTCTCCTTTGGCATCTCAGAATCAGATTCTGAGGCACAGTCTCCTTCATCACCAGAGCGTGACTTGCAAGAGAAGATGTCACAAAAGCAAAAACCGCGATCAGATTGCTTTGATGTTTCTATTGGCTCTGGTATGAGTTCTGACGTATCCAAGAAGGGGAGTGATGGGTCTTCATCATCTTCAGAATCTGATTTAGAGCTTGATGAGGCTAAAGAAGAAAATGGCAATAGCATTTTTTATGCCCTAAGTCAAAAAATTATTGAGCTTGAGGATGAGCTTCATGAAGTAAGGGGTAAACTTGATGCTTCCGAGGAAAAGAACATGCGTTGCCATTGTAATTTTGGTGCTAACTCAGAACTGTCTGAACATGAGGAAAAGCAACAGGTTTCAGATGTGGAAACCAGTAGCCTTCAGAAGGATCTTGATGAAGTCAAAAGTGAAAAGGAAGCATTGGAAGCTGTTGTATTGGTGAACAAAGATGAAATTGATAGGCTGAAGGAATCAATGGTATCGGCAGCCAAGCAGTTTGAAGTTGAACTTGCGCATCGTGATACTGAAATTGATAAGTGCAAACAGGAGCTTGAGGTACTTTCGGAGAAGTATCTGCATGATATATCTGCTCTTGAGGCTGAAATTGGAAAGCTCCAGGGAGTCATCAAAACCTTTGAAGACGACTTTGCAAAAATATCACAGGAGAAATTGATGCTCGAATCTCGGGTTGAAGAGCTTGAGCAGTCAGTTAACAGCTCAAATTATTCGGTTTCTGAGATGGTTAATCTGCAAGAACTAATGAAGGATACACAAGCAGAATTAGAAAAGGTTTCACAGGAGAAAGAAGTGCTCAGAGAACGTGTTCTTGAATTTGAGCAACTTTTGGGGGACTTTGAGAATTCAGGCATGGAGGTTGCAAAGCTACCAGAAACCATCAAGAACTTGGGAGCCCAGATAGAGGGAACACTACAGGAG  ATCAGTACTCCAGGACAGGATTAAGGAGCTGGAGCAGGCTGTCCATGATTCATTGCAGAACCATTCACTGGAGAAGTCCTCTCTGAGTGCTGAGCTTTCAAAATTATCTGAAGCCAATGCTTCTCTTGAAGCCAAGTTGGCATCCGTGGAGGCAGAGCTCAAACAAGTTTACGACGAAAAGGCTAATGAATCCCTCAACAGCGAGAAGGAAATCTCCAGGCTGAATCAAGAACTGGCCAATGTCAAAACCGATCTGGAATTGCTGTTATCCGAGAAATCCCTGGTGGACAACAAAGTAACCACTCTACTAACCGACATCACAACTCGCGATGAAAAGATGAAGCAGATGGATGATCAACTGAATCAGCTTCAGCTTGAGCATTCCAAGCTAATGGCACAGGCCGATCTTGCCCGCAAGTCCCTGTCAGAACTGCATGCTCGGGTATGCGAGCTCGAGAAAGAGGTAGAGATGCAGAAGCTTGTGATCTCTGAGAGCGCCGAGGGGAAGCGCGAGGCGATCAGGCAACTGTGCTTCTCACTCGAGCACTACCGCAGCGGCTACCAGGAGCTGCGGCAGCTGCTGCATGACCAGAAGAGACCACTGGTGATGGCAACATGAACCAAAGCTAGTGATCCTGATGCCATCCTTCTCGGATGCTTTGTGGATGTTTTCTGTCAATGGCAATGCATGCTTTCCTGTGTCTCTCTCTCTCTCTCTTCTACCAGTAGCTTGCTGCTGCTCTATAACTTGTGCACTGTTGCTTCTCCGGCTACTAAGAATTCTGTGTTGTGTCTTGCAATGTGATGGGATAATCAATATCGTTTCT                                                                                                                                                      ]
[+] EMBL AK062017             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATTTTTTATGCCCTAAGTCAAAAAATTATTGAGCTTGAGGATGAGCTTCATGAAGTAAGGGGTAAACTTGATGCTTCCGAGGAAAAGAACATGCGTTGCCATTGTAATTTTGGTGCTAACTCAGAACTGTCTGAACATGAGGAAAAGCAACAGGTTTCAGATGTGGAAACCAGTAGCCTTCAGAAGGATCTTGATGAAGTCAAAAGTGAAAAGGAAGCATTGGAAGCTGTTGTATTGGTGAACAAAGATGAAATTGATAGGCTGAAGGAATCAATGGTATCGGCAGCCAAGCAGTTTGAAGTTGAACTTGCGCATCGTGATACTGAAATTGATAAGTGCAAACAGGAGCTTGAGGTACTTTCGGAGAAGTATCTGCATGATATATCTGCTCTTGAGGCTGAAATTGGAAAGCTCCAGGGAGTCATCAAAACCTTTGAAGACGACTTTGCAAAAATATCACAGGAGAAATTGATGCTCGAATCTCGGGTTGAAGAGCTTGAGCAGTCAGTTAACAGCTCAAATTATTCGGTTTCTGAGATGGTTAATCTGCAAGAACTAATGAAGGATACACAAGCAGAATTAGAAAAGGTTTCACAGGAGAAAGAAGTGCTCAGAGAACGTGATCTTGAATTTGAGCAACTTTTGGGGGACTTTGAGAATTCAGGCATGGAGGTTGCAAAGCTACCAGAAACCATCAAGAACTTGGGAGCCCAGATAGAGGGAACACTACAGGAGAAATCAGTACTCCAGGACAGGATTAAGGAGCTGGAGCAGGCTGTCCATGATTCATTGCAGAACCATTCACTGGAGAAGTCCTCTCTGAGTGCTGAGCTTTCAAAATTATCTGAAGCCAATGCTTCTCTTGAAGCCAAGTTGGCATCCGTGGAGGCAGAGCTCAAACAAGTTTACGACGAAAAGGCTAATGAATCCCTCAACAGCGAGAAGGAAATCTCCAGGCTGAATCAAGAACTGGCCAATGTCAAAACCGATCTGGAATTGCTGTTATCCGAGAAATCCCTGGTGGACAACAAAGTAACCACTCTACTAACCGACATCACAACTCGCGATGAAAAGATGAAGCAGATGGATGATCAACTGAATCAGCTTCAGCTTGAGCATTCCAAGCTAATGGCACAGGCCGATCTTGCCCGCAAGTCCCTGTCAGAACTGCATGCTCGGGTATGCGAGCTCGAGAAAGAGGTAGAGATGCAGAAGCTTGTGATCTCTGAGAGCGCCGAGGGGAAGCGCGAGGCGATCAGGCAACTGTGCTTCTCACTCGAGCACTACCGCAGCGGCTACCAGGAGCTGCGGCAGCTGCTGCATGACCAGAAGAGACCACTGGTGATGGCAACATGAACCAAAGCTAGTGATCCTGATGCCATCCTTCTCGGATGCTTTGTGGATGTTTTCTGTCAATGGCAATGCATGCTTTCCTGTGTCTCTCTCTCTCTCTCTTCTACCAGTAGCTTGCTGCTGCTCTATAACTTGTGCACTGTTGCTTCTCCGGCTACTAAGAATTCTGTGTTGTGTCTTGCAATGTGATGGGATAATCAATATCGTTTCTTGTGTACTCTTATAACTGTCGTCAGGTAATGGGCATAGTGATGTCTATCAATCTATGCTTGATCTTTGAAAGATGATATGCATATCAGCTGT                                                          ]


>consensus_8262#0 CCTTTTTCGTAACTGGCTCTCTCCTCCTCTGCTCCACTGCTGCTCCGCCTCTGCTCGTGT GAGCCCCCAGCCTCCATTCCTGCCTGCCTGCCTGCCTCCTGCTGCTCCTCCCCGGATCGA AATCGATCTCTCCTCTTCCTCCTCCTCCTCCTCTTCTCCATCTCTCCAGATTCCACAAGC CACGCGGGATATGCTGCTCTGATTGATCTCTCTCCACGTCGGGTCAGGTCTTCACCCTTG AGGGAATTGTTTTCATTATCTTATCAAAATGGAGAAAATGCAAAAGACGCAATCAAGGAA ATCCAGCTCATGGTGGTGGGATAGCCATATTAGTCCAAAAAGTTCTAAGTGGCTCTCCGA TAACTTAGAAGTGATGGAGACACAGATAAAAGAAACGCTGGAGCTTATTGAGGAAGGAGA ACCCTCTGCAGAAAAGGCTGGGGTTCTTATTACTCACGTACAGAACTTTCAGCAGATGTA TCGTGTTCTTGCCAAGCGATATGGCAATGTGACTGGAGAATTGCGCAAAAATATCCCATC ATCTCTGCAATCATCTGTCTCCTTTGGCATCTCAGAATCAGATTCTGAGGCACAGTCTCC TTCATCACCAGAGCGTGACTTGCAAGAGAAGATGTCACAAAAGCAAAAACCGCGATCAGA TTGCTTTGATGTTTCTATTGGCTCTGGTATGAGTTCTGACGTATCCAAGAAGGGGAGTGA TGGGTCTTCATCATCTTCAGAATCTGATTTAGAGCTTGATGAGGCTAAAGAAGAAAATGG CAATAGCATTTTTTATGCCCTAAGTCAAAAAATTATTGAGCTTGAGGATGAGCTTCATGA AGTAAGGGGTAAACTTGATGCTTCCGAGGAAAAGAACATGCGTTGCCATTGTAATTTTGG TGCTAACTCAGAACTGTCTGAACATGAGGAAAAGCAACAGGTTTCAGATGTGGAAACCAG TAGCCTTCAGAAGGATCTTGATGAAGTCAAAAGTGAAAAGGAAGCATTGGAAGCTGTTGT ATTGGTGAACAAAGATGAAATTGATAGGCTGAAGGAATCAATGGTATCGGCAGCCAAGCA GTTTGAAGTTGAACTTGCGCATCGTGATACTGAAATTGATAAGTGCAAACAGGAGCTTGA GGTACTTTCGGAGAAGTATCTGCATGATATATCTGCTCTTGAGGCTGAAATTGGAAAGCT CCAGGGAGTCATCAAAACCTTTGAAGACGACTTTGCAAAAATATCACAGGAGAAATTGAT GCTCGAATCTCGGGTTGAAGAGCTTGAGCAGTCAGTTAACAGCTCAAATTATTCGGTTTC TGAGATGGTTAATCTGCAAGAACTAATGAAGGATACACAAGCAGAATTAGAAAAGGTTTC ACAGGAGAAAGAAGTGCTCAGAGAACGTGTTCTTGAATTTGAGCAACTTTTGGGGGACTT TGAGAATTCAGGCATGGAGGTTGCAAAGCTACCAGAAACCATCAAGAACTTGGGAGCCCA GATAGAGGGAACACTACAGGAGAAATCAGTACTCCAGGACAGGATTAAGGAGCTGGAGCA GGCTGTCCATGATTCATTGCAGAACCATTCACTGGAGAAGTCCTCTCTGAGTGCTGAGCT TTCAAAATTATCTGAAGCCAATGCTTCTCTTGAAGCCAAGTTGGCATCCGTGGAGGCAGA GCTCAAACAAGTTTACGACGAAAAGGCTAATGAATCCCTCAACAGCGAGAAGGAAATCTC CAGGCTGAATCAAGAACTGGCCAATGTCAAAACCGATCTGGAATTGCTGTTATCCGAGAA ATCCCTGGTGGACAACAAAGTAACCACTCTACTAACCGACATCACAACTCGCGATGAAAA GATGAAGCAGATGGATGATCAACTGAATCAGCTTCAGCTTGAGCATTCCAAGCTAATGGC ACAGGCCGATCTTGCCCGCAAGTCCCTGTCAGAACTGCATGCTCGGGTATGCGAGCTCGA GAAAGAGGTAGAGATGCAGAAGCTTGTGATCTCTGAGAGCGCCGAGGGGAAGCGCGAGGC GATCAGGCAACTGTGCTTCTCACTCGAGCACTACCGCAGCGGCTACCAGGAGCTGCGGCA GCTGCTGCATGACCAGAAGAGACCACTGGTGATGGCAACATGAACCAAAGCTAGTGATCC TGATGCCATCCTTCTCGGATGCTTTGTGGATGTTTTCTGTCAATGGCAATGCATGCTTTC CTGTGTCTCTCTCTCTCTCTCTTCTACCAGTAGCTTGCTGCTGCTCTATAACTTGTGCAC TGTTGCTTCTCCGGCTACTAAGAATTCTGTGTTGTGTCTTGCAATGTGATGGGATAATCA ATATCGTTTCTTGTGTACTCTTATAACTGTCGTCAGGTAATGGGCATAGTGATGTCTATC AATCTATGCTTGATCTTTGAAAGATGATATGCATATCAGCTGTCAACTTTGTCAAATGTG TGGATTATCCTTGTGCTTTCCAATCCAATCAATGATGAGTT



consensusID : consensus_8262#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 378
fasta sequence
                              [ANGNATAGCTTGTAATCTCTGAGAGCNCCGAGGGGAAGCGCGAGGCGATCAGGCAACTNTNCTTCTCACTCGAGCACTACCGCAGCGGCTACCAGGAGCTGCGGCA-NTGCTGCATGACCAGAAGAGACCACTGGTGATGGCAACATGAACCAAAGCTAGTNATCCTNATGCCATCCTTCTCGGATGCTTTGTGGATGTTTTCTGTCAATGGCAATNCATGTTTTCCTGTGTCTCTCTCTCTCTCTCTTCTACCAGTAGCTTGCTGCTGCTCTATAACTTGTGCACTGTTGCTTCTCCGGCTACTAAGAATTCTGTGTTGTGTCTTNCAATGTGATGGGATAATCAATATCGGTTCTTGTGTACTCTAAANAAAAAAAA]

[+] EMBL AU161834             [ANGNATAGCTTGTAATCTCTGAGAGCNCCGAGGGGAAGCGCGAGGCGATCAGGCAACTNTNCTTCTCACTCGAGCACTACCGCAGCGGCTACCAGGAGCTGCGGCA NTGCTGCATGACCAGAAGAGACCACTGGTGATGGCAACATGAACCAAAGCTAGTNATCCTNATGCCATCCTTCTCGGATGCTTTGTGGATGTTTTCTGTCAATGGCAATNCATGTTTTCCTGTGTCTCTCTCTCTCTCTCTTCTACCAGTAGCTTGCTGCTGCTCTATAACTTGTGCACTGTTGCTTCTCCGGCTACTAAGAATTCTGTGTTGTGTCTTNCAATGTGATGGGATAATCAATATCGGTTCTTGTGTACTCTAAANAAAAAAA ]
[+] EMBL AU033230             [                                                        CTGTGCTTCTCACTCGNGCACTACCGCAGCGGCTACCAGGAGCTGCGGCAGCTGCTGCATGACCAGAAGAGACCACTGGTGATGGCAACATGAACCAAAGCTAGTGATCNTGATGCCATCCTTCNCGGATGCTTTGTGGATGTTTTCTGNCAATGGCAATGCATGCTTTCCTGTGTCTCTCTCTCTCTCTCTTCTACCAGTAGCTTGCTGCTGCTCTATAACTTGTGCACTGTTGCTTCTCCGGCTACTAAGAATTCTGTGTTGTGTCTTGCAATGTGATGGGATAATCAATATCGTTTCTTGTGTACTCTAAAannnnaaaa]


>consensus_8262#1 ANGNATAGCTTGTAATCTCTGAGAGCNCCGAGGGGAAGCGCGAGGCGATCAGGCAACTNT NCTTCTCACTCGAGCACTACCGCAGCGGCTACCAGGAGCTGCGGCANTGCTGCATGACCA GAAGAGACCACTGGTGATGGCAACATGAACCAAAGCTAGTNATCCTNATGCCATCCTTCT CGGATGCTTTGTGGATGTTTTCTGTCAATGGCAATNCATGTTTTCCTGTGTCTCTCTCTC TCTCTCTTCTACCAGTAGCTTGCTGCTGCTCTATAACTTGTGCACTGTTGCTTCTCCGGC TACTAAGAATTCTGTGTTGTGTCTTNCAATGTGATGGGATAATCAATATCGGTTCTTGTG TACTCTAAANAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8262#0      CCTTTTTCGTAACTGGCTCTCTCCTCCTCTGCTCCACTGCTGCTCCGCCTCTGCTCGTGT 60
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      GAGCCCCCAGCCTCCATTCCTGCCTGCCTGCCTGCCTCCTGCTGCTCCTCCCCGGATCGA 120
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      AATCGATCTCTCCTCTTCCTCCTCCTCCTCCTCTTCTCCATCTCTCCAGATTCCACAAGC 180
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      CACGCGGGATATGCTGCTCTGATTGATCTCTCTCCACGTCGGGTCAGGTCTTCACCCTTG 240
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      AGGGAATTGTTTTCATTATCTTATCAAAATGGAGAAAATGCAAAAGACGCAATCAAGGAA 300
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      ATCCAGCTCATGGTGGTGGGATAGCCATATTAGTCCAAAAAGTTCTAAGTGGCTCTCCGA 360
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      TAACTTAGAAGTGATGGAGACACAGATAAAAGAAACGCTGGAGCTTATTGAGGAAGGAGA 420
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      ACCCTCTGCAGAAAAGGCTGGGGTTCTTATTACTCACGTACAGAACTTTCAGCAGATGTA 480
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      TCGTGTTCTTGCCAAGCGATATGGCAATGTGACTGGAGAATTGCGCAAAAATATCCCATC 540
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      ATCTCTGCAATCATCTGTCTCCTTTGGCATCTCAGAATCAGATTCTGAGGCACAGTCTCC 600
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      TTCATCACCAGAGCGTGACTTGCAAGAGAAGATGTCACAAAAGCAAAAACCGCGATCAGA 660
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      TTGCTTTGATGTTTCTATTGGCTCTGGTATGAGTTCTGACGTATCCAAGAAGGGGAGTGA 720
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      TGGGTCTTCATCATCTTCAGAATCTGATTTAGAGCTTGATGAGGCTAAAGAAGAAAATGG 780
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      CAATAGCATTTTTTATGCCCTAAGTCAAAAAATTATTGAGCTTGAGGATGAGCTTCATGA 840
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      AGTAAGGGGTAAACTTGATGCTTCCGAGGAAAAGAACATGCGTTGCCATTGTAATTTTGG 900
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      TGCTAACTCAGAACTGTCTGAACATGAGGAAAAGCAACAGGTTTCAGATGTGGAAACCAG 960
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      TAGCCTTCAGAAGGATCTTGATGAAGTCAAAAGTGAAAAGGAAGCATTGGAAGCTGTTGT 1020
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      ATTGGTGAACAAAGATGAAATTGATAGGCTGAAGGAATCAATGGTATCGGCAGCCAAGCA 1080
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      GTTTGAAGTTGAACTTGCGCATCGTGATACTGAAATTGATAAGTGCAAACAGGAGCTTGA 1140
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      GGTACTTTCGGAGAAGTATCTGCATGATATATCTGCTCTTGAGGCTGAAATTGGAAAGCT 1200
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      CCAGGGAGTCATCAAAACCTTTGAAGACGACTTTGCAAAAATATCACAGGAGAAATTGAT 1260
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      GCTCGAATCTCGGGTTGAAGAGCTTGAGCAGTCAGTTAACAGCTCAAATTATTCGGTTTC 1320
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      TGAGATGGTTAATCTGCAAGAACTAATGAAGGATACACAAGCAGAATTAGAAAAGGTTTC 1380
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      ACAGGAGAAAGAAGTGCTCAGAGAACGTGTTCTTGAATTTGAGCAACTTTTGGGGGACTT 1440
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      TGAGAATTCAGGCATGGAGGTTGCAAAGCTACCAGAAACCATCAAGAACTTGGGAGCCCA 1500
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      GATAGAGGGAACACTACAGGAGAAATCAGTACTCCAGGACAGGATTAAGGAGCTGGAGCA 1560
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      GGCTGTCCATGATTCATTGCAGAACCATTCACTGGAGAAGTCCTCTCTGAGTGCTGAGCT 1620
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      TTCAAAATTATCTGAAGCCAATGCTTCTCTTGAAGCCAAGTTGGCATCCGTGGAGGCAGA 1680
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      GCTCAAACAAGTTTACGACGAAAAGGCTAATGAATCCCTCAACAGCGAGAAGGAAATCTC 1740
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      CAGGCTGAATCAAGAACTGGCCAATGTCAAAACCGATCTGGAATTGCTGTTATCCGAGAA 1800
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      ATCCCTGGTGGACAACAAAGTAACCACTCTACTAACCGACATCACAACTCGCGATGAAAA 1860
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      GATGAAGCAGATGGATGATCAACTGAATCAGCTTCAGCTTGAGCATTCCAAGCTAATGGC 1920
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      ACAGGCCGATCTTGCCCGCAAGTCCCTGTCAGAACTGCATGCTCGGGTATGCGAGCTCGA 1980
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      GAAAGAGGTAGAGATGCAGAAGCTTGTGATCTCTGAGAGCGCCGAGGGGAAGCGCGAGGC 2040
consensus_8262#1      -------------ANGNATA-GCTTGTAATCTCTGAGAGCNCCGAGGGGAAGCGCGAGGC 46
                                   * * * * ****** ************ *******************

consensus_8262#0      GATCAGGCAACTGTGCTTCTCACTCGAGCACTACCGCAGCGGCTACCAGGAGCTGCGGCA 2100
consensus_8262#1      GATCAGGCAACTNTNCTTCTCACTCGAGCACTACCGCAGCGGCTACCAGGAGCTGCGGCA 106
                      ************ * *********************************************

consensus_8262#0      GCTGCTGCATGACCAGAAGAGACCACTGGTGATGGCAACATGAACCAAAGCTAGTGATCC 2160
consensus_8262#1      N-TGCTGCATGACCAGAAGAGACCACTGGTGATGGCAACATGAACCAAAGCTAGTNATCC 165
                        ***************************************************** ****

consensus_8262#0      TGATGCCATCCTTCTCGGATGCTTTGTGGATGTTTTCTGTCAATGGCAATGCATGCTTTC 2220
consensus_8262#1      TNATGCCATCCTTCTCGGATGCTTTGTGGATGTTTTCTGTCAATGGCAATNCATGTTTTC 225
                      * ************************************************ **** ****

consensus_8262#0      CTGTGTCTCTCTCTCTCTCTCTTCTACCAGTAGCTTGCTGCTGCTCTATAACTTGTGCAC 2280
consensus_8262#1      CTGTGTCTCTCTCTCTCTCTCTTCTACCAGTAGCTTGCTGCTGCTCTATAACTTGTGCAC 285
                      ************************************************************

consensus_8262#0      TGTTGCTTCTCCGGCTACTAAGAATTCTGTGTTGTGTCTTGCAATGTGATGGGATAATCA 2340
consensus_8262#1      TGTTGCTTCTCCGGCTACTAAGAATTCTGTGTTGTGTCTTNCAATGTGATGGGATAATCA 345
                      **************************************** *******************

consensus_8262#0      ATATCGTTTCTTGTGTACTCTTATAACTGTCGTCAGGTAATGGGCATAGTGATGTCTATC 2400
consensus_8262#1      ATATCGGTTCTTGTGTACTCTAAANAAAAAAAA--------------------------- 378
                      ****** ************** *  *                                  

consensus_8262#0      AATCTATGCTTGATCTTTGAAAGATGATATGCATATCAGCTGTCAACTTTGTCAAATGTG 2460
consensus_8262#1      ------------------------------------------------------------
                                                                                  

consensus_8262#0      TGGATTATCCTTGTGCTTTCCAATCCAATCAATGATGAGTT 2501
consensus_8262#1      -----------------------------------------
                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)