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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8264#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 4340 fasta sequence
[TCGTGCTGCGCGTCTGACGACCTCGCCCTACCAACCTGCCAATTTCTTCCTTCCTTCCATCCGTCCTGCAACCTCCTCCTCTGCTTCTCGATTTCTCCTCCTCCACTCCATCGTCTCTCTCTCTCTCTCTCTCTCTGCAGCTAACTCCTCCGAATTAGGAGGTTCATCTTGATGTAATTGACTGGATTCAATAAAATTTTTCATTATCTTGAAAAAGAAAGTAGCGGAGGTGCAACGTTGGCATATGGAGAAGCGGAGGCGGCCGGCGGCGGCGGCGATGCTTCTGGTGCTCATCCCTGCTGCATCGCGCCCACCCCATGGGATCGTAGCAGCAACAGAATCCAGTGTCCAGAATAGTGAGCAGAGCTTTGGTTTCAACCTTACACTTGCCAAGACTATTGTGGAGTATGCCTCAGCTGTCTATATGACAGATCTAACAGAGCTCTATACATGGACATGCTCAAAATGCAATGACTTAATCCAAGGGTTCGAGATGAGACGTCTAATCGTTGATGTCCAGAACTGCTTGCAGGCATTTGTTGGTGTCGATCACAATCTCAACGCTATCATTGTTTCAATCAGGGGAACTCAAGAGAACAGTGTACAGAATTGGATTAAGGATATGCTATGGAAGCAATCTGATCTGAACTACCCGGACATGCCCGACGCAAAGCCATCGCAAACGCCGTTCACAAGGCGAGGAAGTTATATGGAGATATTAGCATAATAGTTACAGGGCATTCAATGGGAGGAGCGCTTGCTTCTTTCTGTGCACTTGATCTTGCGATTACCCATGGAGGCAACAATGTTTACCTGATGACTTTTGGGCAGCCGCGCGTTGGCAACGCTGCATTTGCATCCTACTTTACCAAATATGTGCCCAATACAATTCGAGTGACACATGAGCATGACATTGTGCCGCATTTGCCCCCATATTTTTTCATTTTTCCAGACCAAACATACCATCACTTCCCAACAGAGGTATGCTAGCTCTTGCATAAAAACAGGAAATTTGCTACTCCCTCTGTTTCACAATGTAAGTCATTCTAGCATTTTCCACATCTATCTATCTATTATATACTAAAAGTCCATTAAACTTCCTACAAACGCTCTCAAGTTACCACATGGCGCTCTAATAAATTAGAGAAAATCCTGTAAATTCTAAGAAAAAAGCAAAACATCTACCCCTTGATTTTCACTTAAATTGGTGGGTCCAATATTATACACCGTTAGATAAAATTGATTCTAAAATAAACCAAATACTATGGGTCCCACCTAACTCACGTACGTACATGGGTATGCAGTACGTACGCCTCCTTCCAATTATTTTGGTATGTAGTATGTACGCCTCCCTCCAATTATTTCTTCCTTTTTCTCTCTTCTTTTTTCCATTTATATAATTGATATATATATATTCTAAATAAACATAATTTACAAACAAAGAATATACCATCATATAATTCTTTATAAACACAGTTAACTAAATTAGCTCTACAATCTTTGAAAATAAAATTTACACCATTATATGTTTACCCATTAAATCAATATAATTTCCAATTAAACCGGTGTACTCATTAATTTGTACTATTATTTTCAAATAATACACTATTTTAAAATAAACTTTACACAATTATAATGTGTACTTATCAAATAAATAATTTAAGATCTATATTAACTAATTATACGTGCACTTAAACAGATGGACCCATTATTTAAATCATGGGATCTTTTTTTTTATTAATTTGGACTATTATTCTCAAATAATATACTATTTTAAAATAAATTCTACACCATCATATTGTGTACCCATTAAATTAACAATTTAAAATATATATTAACTAATTTACATTTACACTAGAACCGGTGGACCCATTATTTAAATCAACATATCTATTGTTAATAACTAAAGTGTCCAAAGTTCTC-TTTTTGGTCCGCTGCACAATGCACATCTACACCTTTGCCTTTCGCACGTGTGACAAAGCATCGTGTCTGAGGCATCTTAGGTGATCACGATCGCTGCAACGCTACCGCTTTTGTTAATAAAAAATCTTAAGCCACCACATATATATCAACTGTTAAAGATTTTTAGAATGAGAAAACAACGAGTTCTCACCTACATTATTTAGAAACATTAGAAAAACAATGTCCCCTCCACCTCCCTCTCCAATCACATGTGCATAACACTGTTACACTGCCAACCCATCTCTGGCTCGAGTTGTATGCTATTCATTCCTCTCCAATCTCCTCCCTATTTTCAGCATAATATTAACACATATTAATATAATTCGTACTAGGATAAGAGTAATAAGGGAGTTTTAAGGCCTTATTTTTTTTATTGATTCCATCTTTTGCATTTTCGTTTGCACGCTCCACGCTTTTCCAAGTTTATAAATGGTGCTTTTCTTAAACGACTTTTTAACTATTTAGAAGTTAATTCATTTGTTTATAATCTCAAATAGCTATCACATAAATCAGATAATTCATCAATTTCAGTTTTCCTAAACCCTAAGTAGTACATATTTTTTTCGTGCGAATCATGGTGATCAACGAATAATCAAAGTGGTAACATGAATCTTAAGAGCTACTATGAACAATTGCAAATATGTGTCAAAATTATTTGCTATTAATTAGACATCTAATGGTTTGCTAGCAACATATTTAATTTCTCTCTACATGTATATAAACATGGACAAAGCTAGAATGAATATTAACATATATCCCGTACATATATATTACATGTTAATATTCTCATTACATGTGGTAAGTCCATTAAAATTTCAAATACCCTCAAGCTACCACTTGGTGCTCTAATAAATTAGAGAACATATTAGAAATTCTAAGAAAAAAAGCAAATTATCTATTACTTGATTTTCACTTAAATCGGTGGGTTCAATATTATAAACCATTAGATTAAATTGATCTTAGAAGAAACTAAATACTACAAGGTCCCACCTCTCCACCTTCGATACGCACCTACGTACGCGTGGGTACCTATGCTTCCCCTCCCTTTTATCATTTTTCCCTTTCTTCTTTTCTTCATATATACGCTTCCCTCTCTTTCTTACTATATCATGCGCCTTCATGAGACGATTTAATCACAAGAATTTTGAGTATCTTGCTCTCACATTTTTAATTTGTAGCCATACTACAAGCAATATATAGTTTATTATTTACTCGAGAAAATAACATGTTTCAAAAGTCGTAAGTACTTAATCCATCTCCTACTTAAAAATTTGTGAATGGATTTTTAAGATACTTTAAGAAAAATAGAAACCTTAAATTATTATAAAATTACATTATCCGAACTTTAGTTTTCCCTTAATCTATGAGACAAAATCTTTAAACAAATAATAAAAATCTTACCTTTCAATAATATAAGTGCCCGCGCATACGCGCGGGCCACCTTCCTAGTTTCATATTAATGTTAATGAATCTAGACATATATATCTAGCTAGATTCATTAACATCAATATGAATATGGGAAATGTTAGAATGACTTATATTGTGAAACGGAGGAAGTACTACTAAACTGCAGTCACAACGTTTGTGCTTAATTTTTTCTTCACATTGAACTAGATTACAATGCAAGTAGTTTTCTGCAAAACAGTATTTTTTCTTTCCATCTTGGCATCATGAAATGTTTAAACTAATTTGCCAGCCTATTTTATCTGCTTGAAGAATGAAAAAATGCTACCACTCGTGGTTGTATAAATTAAATATATAATTTAAACTGTAACGGTTTTCTTGCTAGATAGCAGAAACCAAACGCCCCCTCTGAACTCTGATATATCATACATCATCGTTTCACCACCCAAACAATGTTCTCACTTACGCATATATATCACCTATACATACGCACTAACTGAAATTTCAGGTCTGGGAACATGAAGTCGATGGCAGCACAGTCTACCAAGTCTGCGACGGCAGCGGCGAAGATCCAGACTGCTCCAGGAGCGTGCTGGTGCTGTTCTGGAGCGCGTCAGACCACCTGACATACCTTGGAGTGGACATGGAGGCCGACGACTGGAGCACCTGCAGGATCGTCCTGGGCAGGAGCGCCGCCGAGACGCTCCTGCTGCAGCACGCACGGCAACTCGCCGGCGGCGACGACGAGAGCGGCGGCGTCAATGTCGTCGTCAGAGATCACGGTGTGCAGGTTGTTGGTTCGGAGATAGCAGTTGCGGCTAGGTAGCCGTACCGTATGTACTTGTGCAACTTGAAAGTGCGTTTTGTGAACACAACTCACTGATGGTATCTCTATATATATAGTTTTGGCTGTAAATTTTTAGATATTGCTTTCTTCTGTAATGCTGGTATAGATTAATTGATATTGAAGTACA]
[+] EMBL AK120281 [TCGTGCTGCGCGTCTGACGACCTCGCCCTACCAACCTGCCAATTTCTTCCTTCCTTCCATCCGTCCTGCAACCTCCTCCTCTGCTTCTCGATTTCTCCTCCTCCACTCCATCGTCTCTCTCTCTCTCTCTCTCTCTGCAGCTAACTCCTCCGAATTAGGAGGTTCATCTTGATGTAATTGACTGGATTCAATAAAATTTTTCATTATCTTGAAAAAGAAAGTAGCGGAGGTGCAACGTTGGCATATGGAGAAGCGGAGGCGGCCGGCGGCGGCGGCGATGCTTCTGGTGCTCATCCCTGCTGCATCGCGCCCACCCCATGGGATCGTAGCAGCAACAGAATCCAGTGTCCAGAATAGTGAGCAGAGCTTTGGTTTCAACCTTACACTTGCCAAGACTATTGTGGAGTATGCCTCAGCTGTCTATATGACAGATCTAACAGAGCTCTATACATGGACATGCTCAAAATGCAATGACTTAATCCAAGGGTTCGAGATGAGACGTCTAATCGTTGATGTCCAGAACTGCTTGCAGGCATTTGTTGGTGTCGATCACAATCTCAACGCTATCATTGTTTCAATCAGGGGAACTCAAGAGAACAGTGTACAGAATTGGATTAAGGATATGCTATGGAAGCAATCTGATCTGAACTACCCGGACATGCCCGACGCAAAGCCATCGCAAACGCCGTTCACAAGGCGAGGAAGTTATATGGAGATATTAGCATAATAGTTACAGGGCATTCAATGGGAGGAGCGCTTGCTTCTTTCTGTGCACTTGATCTTGCGATTACCCATGGAGGCAACAATGTTTACCTGATGACTTTTGGGCAGCCGCGCGTTGGCAACGCTGCATTTGCATCCTACTTTACCAAATATGTGCCCAATACAATTCGAGTGACACATGAGCATGACATTGTGCCGCATTTGCCCCCATATTTTTTCATTTTTCCAGACCAAACATACCATCACTTCCCAACAGAGGTATGCTAGCTCTTGCATAAAAACAGGAAATTTGCTACTCCCTCTGTTTCACAATGTAAGTCATTCTAGCATTTTCCACATCTATCTATCTATTATATACTAAAAGTCCATTAAACTTCCTACAAACGCTCTCAAGTTACCACATGGCGCTCTAATAAATTAGAGAAAATCCTGTAAATTCTAAGAAAAAAGCAAAACATCTACCCCTTGATTTTCACTTAAATTGGTGGGTCCAATATTATACACCGTTAGATAAAATTGATTCTAAAATAAACCAAATACTATGGGTCCCACCTAACTCACGTACGTACATGGGTATGCAGTACGTACGCCTCCTTCCAATTATTTTGGTATGTAGTATGTACGCCTCCCTCCAATTATTTCTTCCTTTTTCTCTCTTCTTTTTTCCATTTATATAATTGATATATATATATTCTAAATAAACATAATTTACAAACAAAGAATATACCATCATATAATTCTTTATAAACACAGTTAACTAAATTAGCTCTACAATCTTTGAAAATAAAATTTACACCATTATATGTTTACCCATTAAATCAATATAATTTCCAATTAAACCGGTGTACTCATTAATTTGTACTATTATTTTCAAATAATACACTATTTTAAAATAAACTTTACACAATTATAATGTGTACTTATCAAATAAATAATTTAAGATCTATATTAACTAATTATACGTGCACTTAAACAGATGGACCCATTATTTAAATCATGGGATCTTTTTTTTTATTAATTTGGACTATTATTCTCAAATAATATACTATTTTAAAATAAATTCTACACCATCATATTGTGTACCCATTAAATTAACAATTTAAAATATATATTAACTAATTTACATTTACACTAGAACCGGTGGACCCATTATTTAAATCAACATATCTATTGTTAATAACTAAAGTGTCCAAAGTTCTC TTTTTGGTCCGCTGCACAATGCACATCTACACCTTTGCCTTTCGCACGTGTGACAAAGCATCGTGTCTGAGGCATCTTAGGTGATCACGATCGCTGCAACGCTACCGCTTTTGTTAATAAAAAATCTTAAGCCACCACATATATATCAACTGTTAAAGATTTTTAGAATGAGAAAACAACGAGTTCTCACCTACATTATTTAGAAACATTAGAAAAACAATGTCCCCTCCACCTCCCTCTCCAATCACATGTGCATAACACTGTTACACTGCCAACCCATCTCTGGCTCGAGTTGTATGCTATTCATTCCTCTCCAATCTCCTCCCTATTTTCAGCATAATATTAACACATATTAATATAATTCGTACTAGGATAAGAGTAATAAGGGAGTTTTAAGGCCTTATTTTTTTTATTGATTCCATCTTTTGCATTTTCGTTTGCACGCTCCACGCTTTTCCAAGTTTATAAATGGTGCTTTTCTTAAACGACTTTTTAACTATTTAGAAGTTAATTCATTTGTTTATAATCTCAAATAGCTATCACATAAATCAGATAATTCATCAATTTCAGTTTTCCTAAACCCTAAGTAGTACATATTTTTTTCGTGCGAATCATGGTGATCAACGAATAATCAAAGTGGTAACATGAATCTTAAGAGCTACTATGAACAATTGCAAATATGTGTCAAAATTATTTGCTATTAATTAGACATCTAATGGTTTGCTAGCAACATATTTAATTTCTCTCTACATGTATATAAACATGGACAAAGCTAGAATGAATATTAACATATATCCCGTACATATATATTACATGTTAATATTCTCATTACATGTGGTAAGTCCATTAAAATTTCAAATACCCTCAAGCTACCACTTGGTGCTCTAATAAATTAGAGAACATATTAGAAATTCTAAGAAAAAAAGCAAATTATCTATTACTTGATTTTCACTTAAATCGGTGGGTTCAATATTATAAACCATTAGATTAAATTGATCTTAGAAGAAACTAAATACTACAAGGTCCCACCTCTCCACCTTCGATACGCACCTACGTACGCGTGGGTACCTATGCTTCCCCTCCCTTTTATCATTTTTCCCTTTCTTCTTTTCTTCATATATACGCTTCCCTCTCTTTCTTACTATATCATGCGCCTTCATGAGACGATTTAATCACAAGAATTTTGAGTATCTTGCTCTCACATTTTTAATTTGTAGCCATACTACAAGCAATATATAGTTTATTATTTACTCGAGAAAATAACATGTTTCAAAAGTCGTAAGTACTTAATCCATCTCCTACTTAAAAATTTGTGAATGGATTTTTAAGATACTTTAAGAAAAATAGAAACCTTAAATTATTATAAAATTACATTATCCGAACTTTAGTTTTCCCTTAATCTATGAGACAAAATCTTTAAACAAATAATAAAAATCTTACCTTTCAATAATATAAGTGCCCGCGCATACGCGCGGGCCACCTTCCTAGTTTCATATTAATGTTAATGAATCTAGACATATATATCTAGCTAGATTCATTAACATCAATATGAATATGGGAAATGTTAGAATGACTTATATTGTGAAACGGAGGAAGTACTACTAAACTGCAGTCACAACGTTTGTGCTTAATTTTTTCTTCACATTGAACTAGATTACAATGCAAGTAGTTTTCTGCAAAACAGTATTTTTTCTTTCCATCTTGGCATCATGAAATGTTTAAACTAATTTGCCAGCCTATTTTATCTGCTTGAAGAATGAAAAAATGCTACCACTCGTGGTTGTATAAATTAAATATATAATTTAAACTGTAACGGTTTTCTTGCTAGATAGCAGAAACCAAACGCCCCCTCTGAACTCTGATATATCATACATCATCGTTTCACCACCCAAACAATGTTCTCACTTACGCATATATATCACCTATACATACGCACTAACTGAAATTTCAGGTCTGGGAACATGAAGTCGATGGCAGCACAGTCTACCAAGTCTGCGACGGCAGCGGCGAAGATCCAGACTGCTCCAGGAGCGTGCTGGTGCTGTTCTGGAGCGCGTCAGACCACCTGACATACCTTGGAGTGGACATGGAGGCCGACGACTGGAGCACCTGCAGGATCGTCCTGGGCAGGAGCGCCGCCGAGACGCTCCTGCTGCAGCACGCACGGCAACTCGCCGGCGGCGACGACGAGAGCGGCGGCGTCAATGTCGTCGTCAGAGATCACGGTGTGCAGGTTGTTGGTTCGGAGATAGCAGTTGCGGCTAGGTAGCCGTACCGTATGTACTTGTGCAACTTGAAAGTGCGTTTTGTGAACACAACTCACTGATGGTATCTCTATATATATAGTTTTGGCTGTAAATTTTTAGATATTGCTTTCTTCTGTAATGCTGGTATAGATTAATTGATATTGAAGTACA]
[+] EMBL AK059731 [ TGCCAATTTCTTCCTTCCTTCCATCCGTCCTGCAACCTCCTCCTCTGCTTCTCGATTTCTCCTCCTCCACTCCATCGTCTCTCTCTCTCTCTCTCTCTCTGCAGCTAACTCCTCCGAATTAGGAGGTTCATCTTGATGTAATTGACTGGATTCAATAAAATTTTTCATTATCTTGAAAAAGAAAGTAGCGGAGGTGCAACGTTGGCATATGGAGAAGCGGAGGCGGCCGGCGGCGGCGGCGATGCTTCTGGTGCTCATCCCTGCTGCATCGCGCCCACCCCATGGGATCGTAGCAGCAACAGAATCCAGTGTCCAGAATAGTGAGCAGAGCTTTGGTTTCAACCTTACACTTGCCAAGACTATTGTGGAGTATGCCTCAGCTGTCTATATGACAGATCTAACAGAGCTCTATACATGGACATGCTCAAAATGCAATGACTTAATCCAAGGGTTCGAGATGAGACGTCTAATCGTTGATGTCCAGAACTGCTTGCAGGCATTTGTTGGTGTCGATCACAATCTCAACGCTATCATTGTTTCAATCAGGGGAACTCAAGAGAACAGTGTACAGAATTGGATTAAGGATATGCTATGGAAGCAATCTGATCTGAACTACCCGGACATGCCCGACGCAAAGCCATCGCAAACGCCGTTCACAAGGCGAGGAAGTTATATGGAGATATTAGCATAATAGTTACAGGGCATTCAATGGGAGGAGCGCTTGCTTCTTTCTGTGCACTTGATCTTGCGATTACCCATGGAGGCAACAATGTTTACCTGATGACTTTTGGGCAGCCGCGCGTTGGCAACGCTGCATTTGCATCCTACTTTACCAAATATGTGCCCAATACAATTCGAGTGACACATGAGCATGACATTGTGCCGCATTTGCCCCCATATTTTTTCATT ]
[+] EMBL CF325286 [ gCTAAATAAACATAATTTACAAACAAAGAATATACCATCATATAATTCTTTATAAACACAGTTAACTAAATTAGCTCTACAATCTTTGAAAATAAAATTTACACCATTATATGTTTACCCATTAAATCAATATAATTTCCAATTAAACCGGTGTACTCATTAATTTGTACTATTATTTTCAAATAATACACTATTTTAAAATAAACTTTACACAATTATAATGTGTACTTATCAAATAAATAATTTAAGATCTATATTAACTAATTATACGTGCACTTAAACAGATGGACCCATTATTTAAATCATGGGATCTTTTTTTTTATTAATTTGGACTATTATTCTCAAATAATATACTATTTTAAAATAAATTCTACACCATCATATTGTGTACCCATTAAATTAACAATTTAAAATATATATTAACTAATTTACATTTACACTAGAACCGGTGGACCCATTATTTAAATCAACATATCTATTGTTAATAACTAAAGTGTCCAAAGTTCTCTTTTTTGGTCCGCTGCACAATGCACATCTACACCTTTGCCTTTCGCACGTGT ]
[-] EMBL CB631819 [ TTTCCAAGTTTATAAATGGTGCTTTTCTTAAACGACTTTTTAACTATTTAGAAGTTAATTCATTTGTTTATAATCTCAAATAGCTATCACATAAATCAGATAATTCATCAATTTCAGTTTTCCTAAACCCTAAGTAGTACATATTTTTTTCGTGCGAATCATGGTGATCAACGAATAATCAAAGTGGTAACATGAATCTTAAGAGCTACTATGAACAATTGCAAATATGTGTCAAAATTATTTGCTATTAATTAGACATCTAATGGTTTGCTAGCAACATATTTAATTTCTCTCTACATGTATATAAACATGGACAAAGCTAGAATGAATATTAACATATATCCCATACATATATATTACATGTTAATATTCTCATTACATGTGGTAAGTCCATTAAAATTTCAAATACCCTCAAGCTACCACTTGGTGCTCTAATAAATTAGAGAACATATTAGAAATTCTAAGAAAAAAAGCAAATTATCTATTACTTGATTTTCACTTAAATCGGTGGGTTCAATATTATAAACCATTAGATTAAATTGATCTTAGAAGAAACTAAATACTACAAGGTCCCACCTCTCCACCTTCGATACGCACCTACGTACGCGTGGGTACCTATGCTTCCCCTCCCTTTTATCATTTTTCCCTTTCTTCTTTTCTTCATATATACGCTTCCCTCTCTTTCTTACTATATCATGCGCCTTCATGAGACGATTTAATCACAAGAATTTTGAGTATCTTGCTCTCACATTTTTAATTTGTAGCCATACTACAAGCAATAAATGGTTT ]
consensusID : consensus_8264#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 634 fasta sequence
[TCGTTTAAATCTCAAANAGCTATCACATAAATTAAATAATTCATCAATTTCAATTGTCCTAAACCCTAAACCCTAAGTAGTACATAATTATAATTTTTTCATGCGAGTCATGGTGATCAGTAAATTAGTGATCAACGCATAATCAAAGTCGTAAGATGAATCTGTAAGAGCTACTATAAACAATTGTAAATAGGTCTGTATATAAACACGGACGAAGCTATAATGAATATTAACATATATCCCATGCATATATATTACATGGTTAATATTATAATTACATGTGGTAAGTACATTAAAATTTCTTAAAATGCCCTCAAGCTGCCACGTGGTGCTCTAATAAATTAGAAAAAATATTAGAAATTCTAAGAAAAAAAGCAAAGTATCTATTACTTGATTTTCACTTAATCGATGGGTCCAATATTATAAACCATTAGATTAAATTGATCTTAGAACAAACTAAATACTACGAGGTTCCACCTCTCCACCTTCGGTATGCACCTACGTACGTGGGTACCTACGCTTCCCCTCCCTTTTATCCATTTTCCCCTTTCTTCTTTTTCTCCATGTATACGCTTCCCTCCCTTTCTTATTGTATCATGCACCTTCATGAGACGATTTAATCACAAGAATTTTA]
[-] EMBL CB638087 [TCGTTTAAATCTCAAANAGCTATCACATAAATTAAATAATTCATCAATTTCAATTGTCCTAAACCCTAAACCCTAAGTAGTACATAATTATAATTTTTTCATGCGAGTCATGGTGATCAGTAAATTAGTGATCAACGCATAATCAAAGTCGTAAGATGAATCTGTAAGAGCTACTATAAACAATTGTAAATAGGTCTGTATATAAACACGGACGAAGCTATAATGAATATTAACATATATCCCATGCATATATATTACATGGTTAATATTATAATTACATGTGGTAAGTACATTAAAATTTCTTAAAATGCCCTCAAGCTGCCACGTGGTGCTCTAATAAATTAGAAAAAATATTAGAAATTCTAAGAAAAAAAGCAAAGTATCTATTACTTGATTTTCACTTAATCGATGGGTCCAATATTATAAACCATTAGATTAAATTGATCTTAGAACAAACTAAATACTACGAGGTTCCACCTCTCCACCTTCGGTATGCACCTACGTACGTGGGTACCTACGCTTCCCCTCCCTTTTATCCATTTTCCCCTTTCTTCTTTTTCTCCATGTATACGCTTCCCTCCCTTTCTTATTGTATCATGCACCTTCATGAGACGATTTAATCACAAGAATTTTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8264#0 TCGTGCTGCGCGTCTGACGACCTCGCCCTACCAACCTGCCAATTTCTTCCTTCCTTCCAT 60
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CCGTCCTGCAACCTCCTCCTCTGCTTCTCGATTTCTCCTCCTCCACTCCATCGTCTCTCT 120
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CTCTCTCTCTCTCTCTGCAGCTAACTCCTCCGAATTAGGAGGTTCATCTTGATGTAATTG 180
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 ACTGGATTCAATAAAATTTTTCATTATCTTGAAAAAGAAAGTAGCGGAGGTGCAACGTTG 240
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 GCATATGGAGAAGCGGAGGCGGCCGGCGGCGGCGGCGATGCTTCTGGTGCTCATCCCTGC 300
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TGCATCGCGCCCACCCCATGGGATCGTAGCAGCAACAGAATCCAGTGTCCAGAATAGTGA 360
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 GCAGAGCTTTGGTTTCAACCTTACACTTGCCAAGACTATTGTGGAGTATGCCTCAGCTGT 420
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CTATATGACAGATCTAACAGAGCTCTATACATGGACATGCTCAAAATGCAATGACTTAAT 480
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CCAAGGGTTCGAGATGAGACGTCTAATCGTTGATGTCCAGAACTGCTTGCAGGCATTTGT 540
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TGGTGTCGATCACAATCTCAACGCTATCATTGTTTCAATCAGGGGAACTCAAGAGAACAG 600
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TGTACAGAATTGGATTAAGGATATGCTATGGAAGCAATCTGATCTGAACTACCCGGACAT 660
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 GCCCGACGCAAAGCCATCGCAAACGCCGTTCACAAGGCGAGGAAGTTATATGGAGATATT 720
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 AGCATAATAGTTACAGGGCATTCAATGGGAGGAGCGCTTGCTTCTTTCTGTGCACTTGAT 780
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CTTGCGATTACCCATGGAGGCAACAATGTTTACCTGATGACTTTTGGGCAGCCGCGCGTT 840
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 GGCAACGCTGCATTTGCATCCTACTTTACCAAATATGTGCCCAATACAATTCGAGTGACA 900
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CATGAGCATGACATTGTGCCGCATTTGCCCCCATATTTTTTCATTTTTCCAGACCAAACA 960
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TACCATCACTTCCCAACAGAGGTATGCTAGCTCTTGCATAAAAACAGGAAATTTGCTACT 1020
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CCCTCTGTTTCACAATGTAAGTCATTCTAGCATTTTCCACATCTATCTATCTATTATATA 1080
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CTAAAAGTCCATTAAACTTCCTACAAACGCTCTCAAGTTACCACATGGCGCTCTAATAAA 1140
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TTAGAGAAAATCCTGTAAATTCTAAGAAAAAAGCAAAACATCTACCCCTTGATTTTCACT 1200
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TAAATTGGTGGGTCCAATATTATACACCGTTAGATAAAATTGATTCTAAAATAAACCAAA 1260
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TACTATGGGTCCCACCTAACTCACGTACGTACATGGGTATGCAGTACGTACGCCTCCTTC 1320
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CAATTATTTTGGTATGTAGTATGTACGCCTCCCTCCAATTATTTCTTCCTTTTTCTCTCT 1380
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TCTTTTTTCCATTTATATAATTGATATATATATATTCTAAATAAACATAATTTACAAACA 1440
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 AAGAATATACCATCATATAATTCTTTATAAACACAGTTAACTAAATTAGCTCTACAATCT 1500
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TTGAAAATAAAATTTACACCATTATATGTTTACCCATTAAATCAATATAATTTCCAATTA 1560
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 AACCGGTGTACTCATTAATTTGTACTATTATTTTCAAATAATACACTATTTTAAAATAAA 1620
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CTTTACACAATTATAATGTGTACTTATCAAATAAATAATTTAAGATCTATATTAACTAAT 1680
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TATACGTGCACTTAAACAGATGGACCCATTATTTAAATCATGGGATCTTTTTTTTTATTA 1740
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 ATTTGGACTATTATTCTCAAATAATATACTATTTTAAAATAAATTCTACACCATCATATT 1800
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 GTGTACCCATTAAATTAACAATTTAAAATATATATTAACTAATTTACATTTACACTAGAA 1860
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CCGGTGGACCCATTATTTAAATCAACATATCTATTGTTAATAACTAAAGTGTCCAAAGTT 1920
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CTCTTTTTGGTCCGCTGCACAATGCACATCTACACCTTTGCCTTTCGCACGTGTGACAAA 1980
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 GCATCGTGTCTGAGGCATCTTAGGTGATCACGATCGCTGCAACGCTACCGCTTTTGTTAA 2040
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TAAAAAATCTTAAGCCACCACATATATATCAACTGTTAAAGATTTTTAGAATGAGAAAAC 2100
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 AACGAGTTCTCACCTACATTATTTAGAAACATTAGAAAAACAATGTCCCCTCCACCTCCC 2160
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TCTCCAATCACATGTGCATAACACTGTTACACTGCCAACCCATCTCTGGCTCGAGTTGTA 2220
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TGCTATTCATTCCTCTCCAATCTCCTCCCTATTTTCAGCATAATATTAACACATATTAAT 2280
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 ATAATTCGTACTAGGATAAGAGTAATAAGGGAGTTTTAAGGCCTTATTTTTTTTATTGAT 2340
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TCCATCTTTTGCATTTTCGTTTGCACGCTCCACGCTTTTCCAAGTTTATAAATGGTGCTT 2400
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TTCTTAAACGACTTTTTAACTATTTAGAAGTTAATTCATTTGTTTATAATCTCAAATAGC 2460
consensus_8264#1 ---------------------------------------TCGTTTA-AATCTCAAANAGC 20
* ***** ********* ***
consensus_8264#0 TATCACATAAATCAGATAATTCATCAATTTCAGTTTTCCTAAACCCTAAGTAGTACATAT 2520
consensus_8264#1 TATCACATAAATTAAATAATTCATCAATTTCAATTGTCCTAAACCCTAAACCCTAAGTAG 80
************ * ***************** ** ************* ** **
consensus_8264#0 TTTTTTCGTGCGAATCATGGTGATCAACGAATAATCAAAGTGGTAACATGAATCTTAAGA 2580
consensus_8264#1 TACAT-------AATTATAATTTTTTCATGCGAGTCATGGTGATCA-GTAAATTA----- 127
* * *** ** * * * *** *** * * * ***
consensus_8264#0 GCTACTATGAACAATTGCAAATATGTGTCAAAATTATTTGCTATTAATTAGACATCTAAT 2640
consensus_8264#1 ------GTGATCAAC-GCATA-----ATCAAAGTCGTA-------AGATGAATCTGTAAG 168
*** *** *** * ***** * * * * * * ***
consensus_8264#0 GGTTTGCTAGCAACATATTTAATTTCTCTCTACATGTATATAAACATGGACAAAGCTAGA 2700
consensus_8264#1 AGCT-ACTATAAACAATTGTAAATAGGTC-----TGTATATAAACACGGACGAAGCTATA 222
* * *** **** * *** * ************ **** ****** *
consensus_8264#0 ATGAATATTAACATATATCCCGTACATATATATTACATG-TTAATATTCTCATTACATGT 2759
consensus_8264#1 ATGAATATTAACATATATCCCATGCATATATATTACATGGTTAATATTATAATTACATGT 282
********************* * *************** ******** * *********
consensus_8264#0 GGTAAGTCCATTAAAATTTC---AAATACCCTCAAGCTACCACTTGGTGCTCTAATAAAT 2816
consensus_8264#1 GGTAAGTACATTAAAATTTCTTAAAATGCCCTCAAGCTGCCACGTGGTGCTCTAATAAAT 342
******* ************ **** ********** **** ****************
consensus_8264#0 TAGAGAACATATTAGAAATTCTAAGAAAAAAAGCAAATTATCTATTACTTGATTTTCACT 2876
consensus_8264#1 TAGAAAAAATATTAGAAATTCTAAGAAAAAAAGCAAAGTATCTATTACTTGATTTTCACT 402
**** ** ***************************** **********************
consensus_8264#0 TAAATCGGTGGGTTCAATATTATAAACCATTAGATTAAATTGATCTTAGAAGAAACTAAA 2936
consensus_8264#1 TAA-TCGATGGGTCCAATATTATAAACCATTAGATTAAATTGATCTTAGAACAAACTAAA 461
*** *** ***** ************************************* ********
consensus_8264#0 TACTACAAGGTCCCACCTCTCCACCTTCGATACGCACCTACGTACGCGTGGGTACCTATG 2996
consensus_8264#1 TACTACGAGGTTCCACCTCTCCACCTTCGGTATGCACCTACGTAC--GTGGGTACCTACG 519
****** **** ***************** ** ************ *********** *
consensus_8264#0 CTTCCCCTCCCTTTTATC-ATTTTTCCCTTTCTTCTTTT-CTTCATATATACGCTTCCCT 3054
consensus_8264#1 CTTCCCCTCCCTTTTATCCATTTTCCCCTTTCTTCTTTTTCTCCATGTATACGCTTCCCT 579
****************** ***** ************** ** *** *************
consensus_8264#0 CTCTTTCTTACTATATCATGCGCCTTCATGAGACGATTTAATCACAAGAATTTTGAGTAT 3114
consensus_8264#1 CCCTTTCTTATTGTATCATGCACCTTCATGAGACGATTTAATCACAAGAATTTTA----- 634
* ******** * ******** ********************************
consensus_8264#0 CTTGCTCTCACATTTTTAATTTGTAGCCATACTACAAGCAATATATAGTTTATTATTTAC 3174
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TCGAGAAAATAACATGTTTCAAAAGTCGTAAGTACTTAATCCATCTCCTACTTAAAAATT 3234
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TGTGAATGGATTTTTAAGATACTTTAAGAAAAATAGAAACCTTAAATTATTATAAAATTA 3294
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CATTATCCGAACTTTAGTTTTCCCTTAATCTATGAGACAAAATCTTTAAACAAATAATAA 3354
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 AAATCTTACCTTTCAATAATATAAGTGCCCGCGCATACGCGCGGGCCACCTTCCTAGTTT 3414
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CATATTAATGTTAATGAATCTAGACATATATATCTAGCTAGATTCATTAACATCAATATG 3474
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 AATATGGGAAATGTTAGAATGACTTATATTGTGAAACGGAGGAAGTACTACTAAACTGCA 3534
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 GTCACAACGTTTGTGCTTAATTTTTTCTTCACATTGAACTAGATTACAATGCAAGTAGTT 3594
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TTCTGCAAAACAGTATTTTTTCTTTCCATCTTGGCATCATGAAATGTTTAAACTAATTTG 3654
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CCAGCCTATTTTATCTGCTTGAAGAATGAAAAAATGCTACCACTCGTGGTTGTATAAATT 3714
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 AAATATATAATTTAAACTGTAACGGTTTTCTTGCTAGATAGCAGAAACCAAACGCCCCCT 3774
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CTGAACTCTGATATATCATACATCATCGTTTCACCACCCAAACAATGTTCTCACTTACGC 3834
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 ATATATATCACCTATACATACGCACTAACTGAAATTTCAGGTCTGGGAACATGAAGTCGA 3894
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TGGCAGCACAGTCTACCAAGTCTGCGACGGCAGCGGCGAAGATCCAGACTGCTCCAGGAG 3954
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CGTGCTGGTGCTGTTCTGGAGCGCGTCAGACCACCTGACATACCTTGGAGTGGACATGGA 4014
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 GGCCGACGACTGGAGCACCTGCAGGATCGTCCTGGGCAGGAGCGCCGCCGAGACGCTCCT 4074
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 GCTGCAGCACGCACGGCAACTCGCCGGCGGCGACGACGAGAGCGGCGGCGTCAATGTCGT 4134
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 CGTCAGAGATCACGGTGTGCAGGTTGTTGGTTCGGAGATAGCAGTTGCGGCTAGGTAGCC 4194
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 GTACCGTATGTACTTGTGCAACTTGAAAGTGCGTTTTGTGAACACAACTCACTGATGGTA 4254
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TCTCTATATATATAGTTTTGGCTGTAAATTTTTAGATATTGCTTTCTTCTGTAATGCTGG 4314
consensus_8264#1 ------------------------------------------------------------
consensus_8264#0 TATAGATTAATTGATATTGAAGTACA 4340
consensus_8264#1 --------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||