cluster # 8270

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8270 cluster # 8270 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8270#0 length = 2094 sequences # 5
consensusID : consensus_8270#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2094
fasta sequence
                              [AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAATTCTAGAAGATTGTGATGATGTGGAAGATGTGGAAGGTTGTGGTGGAAATAGTGTGGATCATCTTGGCAGTTTACTTCACTTGAGGTACCTTGGGTTACCAGATACTGACATTAGCAAGCTCCCAAAGGAAGTAGGAGGTCTCAAGTTTCTCCAGACTTTGGATTTATGGAATACTGGCATAAAGGAGCTGCCACAGGCAGTGGGCCTGTTGACACAACTGTTGTGCTTACACACTGATCGGAGTACGACAGTGCCAGCCGGTTTGATCGGCAAGCTGACGTCTTTGCAAGAGCTGTGGACATGGCCTGGTTCCGCATACTACCGCGACATGGACCCAGTGGCTGGTGCCGCTTCGACACGCC-GTTTTGCGAAGGAGCTGGGTAACCTGAGGGAACTGAGGGTGCTCCGTGCTAGTATTTATGCAGTTGATGAGAGCACGGAGAGAGATTTGATGGAGTCCCTGCTTGGCAATCTTCAGAAAATTCAGAGTGTGGATATTTTTGGATCACCACTAGAGAGGGGAGTCACATGGGATGCAGGATTTGCCTCTCGTTGGCGCCTCCGGCACCTGAATTTGGAATGCTTCGAGCTCTCTAGACTGCCAGCGTCGGTTAACTCCTCGCTTCTTCCGAACCTCTCCCATCTAGACATGAAAGTGCAGGTTATGCAAGAGCAGGACATGGAAACTCTTGGGAGGCTGCCCGAGCTGCGTTGCCTTGTACTGGATTCGCGTTACACCAAAGTGGTAAGAATTAAGAATACTGGCAGTGATTGCTACTTCAAGAAGTTGAGATTCTTCACGATGGGCAGTTCATCCATCTTGTTTGATGTGCAAGGCAGTGAATGCGCTATCATGCCAAGCCTTGAATCCCTTGCATTTAGTGTCCATGTGCGGTTCCTCAAAGACGCGGACCTGCTTTGTTTCAAAAAACTTGGCTTGGTGAACCTCCCTAGCTCGCTTCAGCGAGTCACCGTTGAAATCAACTCTTGGGATGCCCATGATACAGAGGTGGAAGAAGCGGAGGCCATGTTGGAGCATGCAGCCATCGTCCATCCTAATCATCCCATCTTCCAAACCACACGGCCATTTGGAAAATATATCATGCTCTTACCTGACCAAGAGCCAAGCAGCACCAATCCTAAAGTTGATAGATGTGATGTCAATCTGCGAAAGAACGA-CGGAGACCATTTGGACTTCCGATGGCTGTTGATGAATCCACGCGTCGAGAAATTCTGTGTCTCCATAAACTGCGAGAATGCTAGTCTTGAGGAGGTTGAGGAAGCAGAGGCGGCTGCAAGATATGCAGTCGATGTCCATCCCAATTGTCCCACTCTTGAACTGGTGAGATATGGTGAAGATAAGATGGTGCTACCCAACCCCCAGCAACAGGTTGGTTATCTATCTTGATGACTTTCACAATCATGTTGCTGGTTGTAAGAATGAATCATCACATACTTGGCAACTTCGGAGTATATGCCTGTGAAACTCTAGACAGAATGTATTGGATATCGTTCACTCCAAAAATACAAGTTTACAACACAAGGATTCTATACCACTAGTTTCTGATGGAAATGGCAGCAAGCATGAATGAGCTGAACATGTCAACCTTCCAGACGTGTGTGTGCTCATGCTGTTTACTTTGCAGATCGTTTAACACATCGTGATATTGAACAGACAACAAAAATATCACCTGTATATTGAAATGAAGTGAGGAAATCTCTGATGATGTCAATGATAATTTGCTAGAAAGTTGTTCAAGGTCAGTATGTAAGGACCACATTTTTTTTTCTGGTTGTGGATAGTTGAATATCATAGAATTATTTCTGAGGTAACGCATAAAATGTCTCCTGCATCTTATTAGAACGTATTGGATTAGAAAGGGGATTGTGTGCAGTGGAAGGAATTTGGAGTTGCGTAGTGGCAAATATACAATTGTTCGTAATATAGATCGCCCCACTGGAGCTGGAACATCTTAGGCTCCTAGCTGCATGGCTTGTATGATAAATTGGCGGATGCTTTGCAGTTTGCAGCTGAAAATTTATTTCTTC]

[+] EMBL AK106559             [AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAATTCTAGAAGATTGTGATGATGTGGAAGATGTGGAAGGTTGTGGTGGAAATAGTGTGGATCATCTTGGCAGTTTACTTCACTTGAGGTACCTTGGGTTACCAGATACTGACATTAGCAAGCTCCCAAAGGAAGTAGGAGGTCTCAAGTTTCTCCAGACTTTGGATTTATGGAATACTGGCATAAAGGAGCTGCCACAGGCAGTGGGCCTGTTGACACAACTGTTGTGCTTACACACTGATCGGAGTACGACAGTGCCAGCCGGTTTGATCGGCAAGCTGACGTCTTTGCAAGAGCTGTGGACATGGCCTGGTTCCGCATACTACCGCGACATGGACCCAGTGGCTGGTGCCGCTTCGACACGCC GTTTTGCGAAGGAGCTGGGTAACCTGAGGGAACTGAGGGTGCTCCGTGCTAGTATTTATGCAGTTGATGAGAGCACGGAGAGAGATTTGATGGAGTCCCTGCTTGGCAATCTTCAGAAAATTCAGAGTGTGGATATTTTTGGATCACCACTAGAGAGGGGAGTCACATGGGATGCAGGATTTGCCTCTCGTTGGCGCCTCCGGCACCTGAATTTGGAATGCTTCGAGCTCTCTAGACTGCCAGCGTCGGTTAACTCCTCGCTTCTTCCGAACCTCTCCCATCTAGACATGAAAGTGCAGGTTATGCAAGAGCAGGACATGGAAACTCTTGGGAGGCTGCCCGAGCTGCGTTGCCTTGTACTGGATTCGCGTTACACCAAAGTGGTAAGAATTAAGAATACTGGCAGTGATTGCTACTTCAAGAAGTTGAGATTCTTCACGATGGGCAGTTCATCCATCTTGTTTGATGTGCAAGGCAGTGAATGCGCTATCATGCCAAGCCTTGAATCCCTTGCATTTAGTGTCCATGTGCGGTTCCTCAAAGACGCGGACCTGCTTTGTTTCAAAAAACTTGGCTTGGTGAACCTCCCTAGCTCGCTTCAGCGAGTCACCGTTGAAATCAACTCTTGGGATGCCCATGATACAGAGGTGGAAGAAGCGGAGGCCATGTTGGAGCATGCAGCCATCGTCCATCCTAATCATCCCATCTTCCAAACCACACGGCCATTTGGAAAATATATCATGCTCTTACCTGACCAAGAGCCAAGCAGCACCAATCCTAAAGTTGATAGATGTGATGTCAATCTGCGAAAGAACGA CGGAGACCATTTGGACTTCCGATGGCTGTTGATGAATCCACGCGTCGAGAAATTCTGTGTCTCCATAAACTGCGAGAATGCTAGTCTTGAGGAGGTTGAGGAAGCAGAGGCGGCTGCAAGATATGCAGTCGATGTCCATCCCAATTGTCCCACTCTTGAACTGGTGAGATATGGTGAAGATAAGATGGTGCTACCCAACCCCCAGCAACAGGTTGGTTATCTATCTTGATGACTTTCACAATCATGTTGCTGGTTGTAAGAATGAATCATCACATACTTGGCAACTTCGGAGTATATGCCTGTGAAACTCTAGACAGAATGTATTGGATATCGTTCACTCCAAAAATACAAGTTTACAACACAAGGATTCTATACCACTAGTTTCTGATGGAAATGGCAGCAAGCATGAATGAGCTGAACATGTCAACCTTCCAGACGTGTGTGTGCTCATGCTGTTTACTTTGCAGATCGTTTAACACATCGTGATATTGAACAGACAACAAAAATATCACCTGTATATTGAAATGAAGTGAGGAAATCTCTGATGATGTCAATGATAATTTGCTAGAAAGTTGTTCAAGGTCAGTATGTAAGGACCACATTTTTTTTTCTGGTTGTGGATAGTTGAATATCATAGAATTA                                                                                                                                                                                                                                    ]
[+] EMBL C28458               [                                                       TGTNATGATGTGGAAGATGTGGAAGGTTGTGGTGGAAATAGTGTGGATCATCTTGGCAGTTTACTTCACTTGAGGTACCTTGGGTTACCAGATACTGACATTAGCAAGCTCCCAAAGGAAGTAGGAGGTCTCAAGTTTCTCCAGACTTTGGATTTATGGAATACTGGCATAAAGGAGCTGCCACAGGCAGTGGGCCTGTTGACACAACTGTTGTGCTTACACACTGATCGGAGTACGACAGTNCCAGCCGGTTTGATCGGCAAGCTGACGTCTTTGCAAGAGCTGTGGACATGGCCTGGTTCCGCATACTACCGCGACATGGACCCAGTGGCTGGTGCCGCTTCGACANGCC GTTTT CGAAGGAGCTGGGTAACCTNAGGG ACTTAGGGTG TCCGTGCTAGTATTTATGCAGTTGATGAGAGCACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB669980             [                                                                                                                                                                                                                                                                                                                                                                                                                    GCCNGTTTTGCGAAGGAGCTGGGTAACCTGAGGGAACTGAGGGTGCTCCGTGCTAGTATTTATGCAGTTGATGAGAGCACGGAGAGAGATTTGATGGAGTCCCTGCTTGGCAATCTTCAGAAAATTCAGAGTGTGGATATTTTTGGATCACCACTAGAGAGGGGAGTCACATGGGATGCAGGATTTGCCTCTCGTTGGCGCCTCCGGCACCTGAATTTGGAATGCTTCGAGCTCTCTAGACTGCCAGCGTCGGTTAACTCCTCGCTTCTTCCGAACCTCTCCCATCTAGACATGAAAGTGCAGGTTATGCAAGAGCAGGACATGGAAACTCTTGGGAGGCTGCCCGAGCTGCGTTGCCTTGTACTGGATTCGCGTTACACCAAAGTGGTAAGAATTAAGAATACTGGCAGTGATTGCTACTTCAAGAAGTTGAGATTCTTCACGATGGGCAGTTCATCCATCTTGTTTGATGTGCAAGGCAGTGAATGCGCTATCATGCCAAGCCTTGAATCCCTTGCATTTAGTGTCCATGTGCGGTTCCTCAAAGACGCGGACCTGCTTTGTTTCAAAAAACTTGGCTTGGTGAACCTCCCTAGCTCGCTTCAGCGAGTCACCGTTGAAATCAACTCTTGGGATGCCCATGATACAGAGGTGGAAGAAGCGGAGGCCATGTTGGAGCATGCAGCCATCGTCCATCCTAATCATCCCATCTTCCAAACCACACGGCCATTTGGAAAATATATCATGCTCTTACCTGACCAAGAGCCAAGCAGCACCAATCCTAAAGTTGATAGATGTGATGTCAATCTGCGAAAGAACGA CGGAGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU092964             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTGCGAAAGAACGACCGGAGNCCATTTGGACTCCCGATGGCTGTTGATGAATCCACGCGTCNAGAAATTCTGTGTCTCCATAAACTGCGAGAATGCTAGTCTTGAGGAGGTTGAGGAAGCAGAGGCGGCTGCAAGATATGCAGTCGATGTCCATCCCAATTGTCCCACTCTTGAACTGGTGAGATATGGTGAAGATAAGATGGTGCTACCCAACCCCCAGCAACAGGTTGGTTATCTATCTTGATGACTTTCACAATCATGTTGCTGGTTGTAAGAATGAATCATCACATACTTGGCAACTTCGGAGTATATGCCTGTGAAACTCTAGACAGAATGTATTGGATATCGTTCACTCCAAAAATACAAGTTTACAACACAAGGATTCTATACCACTAGTTTCTGATGGAAATGGCAGCAAGCATGAATGAGCTGAACATGTCAACCTTCCAGACGTGTGTGTGCTCATGCTGTTTACTTTGCAGATCGTTTAACACATCGTGATATTGAACAGACAACAAAAATATCACCTGTATATTGAAATGAAGTGAGGAAATCTCTGATGATGTCAATGATAAaaaaaa                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB669981             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCAGTCGATGTCCATCCCAATTGTCCCACTCTTGAACTGGTGAGATATGGTGAAGATAAGATGGTGCTACCCAACCCCCAGCAACAGGTTGGTTATCTATCTTGATGACTTTCACAATCATGTTGCTGGTTGTAAGAATGAATCATCACATACTTGGCAACTTCGGAGTATATGCCTGTGAAACTCTAGACAGAATGTATTGGATATCGTTCACTCCAAAAATACAAGTTTACAACACAAGGATTCTATACCACTAGTTTCTGATGGAAATGGCAGCAAGCATGAATGAGCTGAACATGTCAACCTTCCAGACGTGTGTGTGCTCATGCTGTTTACTTTGCAGATCGTTTAACACATCGTGATATTGAACAGACAACAAAAATATCACCTGTATATTGAAATGAAGTGAGGAAATCTCTGATGATGTCAATGATAATTTGCTAGAAAGTTGTTCAAGGTCAGTATGTAAGGACCACATTTTTTTTTCTGGTTGTGGATAGTTGAATATCATAGAATTATTTCTGAGGTAACGCATAAAATGTCTCCTGCATCTTATTAGAACGTATTGGATTAGAAAGGGGATTGTGTGCAGTGGAAGGAATTTGGAGTTGCGTAGTGGCAAATATACAATTGTTCGTAATATAGATCGCCCCACTGGAGCTGGAACATCTTAGGCTCCTAGCTGCATGGCTTGTATGATAAATTGGCGGATGCTTTGCAGTTTGCAGCTGAAAATTTATTTCTTC]




>consensus_8270#0
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAATTCTAGAAGATTGTGA
TGATGTGGAAGATGTGGAAGGTTGTGGTGGAAATAGTGTGGATCATCTTGGCAGTTTACT
TCACTTGAGGTACCTTGGGTTACCAGATACTGACATTAGCAAGCTCCCAAAGGAAGTAGG
AGGTCTCAAGTTTCTCCAGACTTTGGATTTATGGAATACTGGCATAAAGGAGCTGCCACA
GGCAGTGGGCCTGTTGACACAACTGTTGTGCTTACACACTGATCGGAGTACGACAGTGCC
AGCCGGTTTGATCGGCAAGCTGACGTCTTTGCAAGAGCTGTGGACATGGCCTGGTTCCGC
ATACTACCGCGACATGGACCCAGTGGCTGGTGCCGCTTCGACACGCCGTTTTGCGAAGGA
GCTGGGTAACCTGAGGGAACTGAGGGTGCTCCGTGCTAGTATTTATGCAGTTGATGAGAG
CACGGAGAGAGATTTGATGGAGTCCCTGCTTGGCAATCTTCAGAAAATTCAGAGTGTGGA
TATTTTTGGATCACCACTAGAGAGGGGAGTCACATGGGATGCAGGATTTGCCTCTCGTTG
GCGCCTCCGGCACCTGAATTTGGAATGCTTCGAGCTCTCTAGACTGCCAGCGTCGGTTAA
CTCCTCGCTTCTTCCGAACCTCTCCCATCTAGACATGAAAGTGCAGGTTATGCAAGAGCA
GGACATGGAAACTCTTGGGAGGCTGCCCGAGCTGCGTTGCCTTGTACTGGATTCGCGTTA
CACCAAAGTGGTAAGAATTAAGAATACTGGCAGTGATTGCTACTTCAAGAAGTTGAGATT
CTTCACGATGGGCAGTTCATCCATCTTGTTTGATGTGCAAGGCAGTGAATGCGCTATCAT
GCCAAGCCTTGAATCCCTTGCATTTAGTGTCCATGTGCGGTTCCTCAAAGACGCGGACCT
GCTTTGTTTCAAAAAACTTGGCTTGGTGAACCTCCCTAGCTCGCTTCAGCGAGTCACCGT
TGAAATCAACTCTTGGGATGCCCATGATACAGAGGTGGAAGAAGCGGAGGCCATGTTGGA
GCATGCAGCCATCGTCCATCCTAATCATCCCATCTTCCAAACCACACGGCCATTTGGAAA
ATATATCATGCTCTTACCTGACCAAGAGCCAAGCAGCACCAATCCTAAAGTTGATAGATG
TGATGTCAATCTGCGAAAGAACGACGGAGACCATTTGGACTTCCGATGGCTGTTGATGAA
TCCACGCGTCGAGAAATTCTGTGTCTCCATAAACTGCGAGAATGCTAGTCTTGAGGAGGT
TGAGGAAGCAGAGGCGGCTGCAAGATATGCAGTCGATGTCCATCCCAATTGTCCCACTCT
TGAACTGGTGAGATATGGTGAAGATAAGATGGTGCTACCCAACCCCCAGCAACAGGTTGG
TTATCTATCTTGATGACTTTCACAATCATGTTGCTGGTTGTAAGAATGAATCATCACATA
CTTGGCAACTTCGGAGTATATGCCTGTGAAACTCTAGACAGAATGTATTGGATATCGTTC
ACTCCAAAAATACAAGTTTACAACACAAGGATTCTATACCACTAGTTTCTGATGGAAATG
GCAGCAAGCATGAATGAGCTGAACATGTCAACCTTCCAGACGTGTGTGTGCTCATGCTGT
TTACTTTGCAGATCGTTTAACACATCGTGATATTGAACAGACAACAAAAATATCACCTGT
ATATTGAAATGAAGTGAGGAAATCTCTGATGATGTCAATGATAATTTGCTAGAAAGTTGT
TCAAGGTCAGTATGTAAGGACCACATTTTTTTTTCTGGTTGTGGATAGTTGAATATCATA
GAATTATTTCTGAGGTAACGCATAAAATGTCTCCTGCATCTTATTAGAACGTATTGGATT
AGAAAGGGGATTGTGTGCAGTGGAAGGAATTTGGAGTTGCGTAGTGGCAAATATACAATT
GTTCGTAATATAGATCGCCCCACTGGAGCTGGAACATCTTAGGCTCCTAGCTGCATGGCT
TGTATGATAAATTGGCGGATGCTTTGCAGTTTGCAGCTGAAAATTTATTTCTTC
clustalw multiple alignements is not computed in this case