cluster # 8275

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Oryza sativa
cluster # 8275 cluster # 8275 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8275#0 length = 2621 sequences # 5
consensusID : consensus_8275#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2621
fasta sequence
                              [CTCCCATCTCCCATGGCAACCACGGCGGCGGCGTCGCCGCCGGCGATCGCGACCGCGCTCTCCGCCCTGCTGCGGCGACAGAGGAGGAGAAGCAGCCGTTGCGTGGGGGCATCGCACGCCAGATGCCTCGCCGCCGACGCGAATGCTGAGGCGGTGGCGCCGAGCCGGAGGGGAGGCCACGGTGGGACGCGCCTTGAGGAGGCCGTGCCGGCCGGCGAGGGGCGCTCGAGGATCGACGCGTGGATCTCCGCGAGGCTCGGGGGCGGAGGCGTCAGCCGCGCGCGTATCCAGGCGAGCATCCGCGCCGGCCTCGTCGTCGTCAATGGCCGTCCCGTCTCCAAGGTTTCACATATGGTAAAAGGTGGAGACATTGTCAGCTGCACGGTGTTGGAGCTGCAGCCACTGAGAGCAGAGCCAGAGGACATCCCACTGGACATTGTTTATGAGGATGACCATCTTCTCGTTGTGAACAAACCGGCTCATATGGTTGTTCACCCAGCACCAGGAAATGCAAATGGCACCTTAGTCAATGCTATACTTCACCACTGCAAGATTTCAACATTTACCTGTTTAGCACGTAATTCAATTGATGATGAATGCCCTGATTCTTCAGATGATGATATTGATGTGTTTGACATCGATCAATTTACTACTGGCGAAGTAAGTTCAGAAGTCCGTGAAGCTCTTGTGCGTCCTGGTATCGTGCATAGGCTTGATAAGGGTACAAGTGGACTACTTGTTGTAGCCAAGGATGAGCATTCTCATGCACAATTAGCAGAACAATTCAAGCTGCATACAATACGCAGAGTGTACATCAGTCTTACTTGTGGTGCACCGAATCCGAATTCTGGCAGGATTGAAGTTCCTATAGCTCGTGATCCTAACAACCGGATCCGTATGATTGCCACTCCTGGATCAGGCCATAGATATGCACGACATGCCGCTAGTAGGTATAAAGTAAGAGAGGTCTTTGCTGGTGGTGGATCAGCACTAGTAGAGTGGAGATTGGAGACAGGACGAACTCACCAGATTCGAGCACATGCAAAGTACCTAGGGATTCCCCTTCTTGGGGATGAAACATACGGAGGTACCAAAAGCATGGCATTGTCACTTTTGAGACCCAGAACTCCTTCAAGATATCATTGTGATCTTTCAAATATGATATCAAAGATAGACAGGCCATGTCTCCATGCCGCGTTGCTTGGATTTAAGCATCCTCACTCAGGAAAGATCCTTGAATTCTCATGCCCCCCACCAGATGATTTTACTGAGGTACTCAATGAACTTCATCAGGTTACACTGGCAAGTAATGGTAATAGTGGTGGCGGTGTTGCCCGCATTTGTGATTAGTGCAAGGCAGAAATCCACGAAAATGTTGCCGAGGAAATGGTATGCCTGCCTTTTTATCTGACTTCTGCACTCTGATCAAGGGGCAAGACTGCAGATACAGAATTGGAACTGATTATAAAGCTAGCTTCCCTTGTTTCATACTCCGAAGGGAGGGGCCAAAATGTTCTTAATCAGTAGGTCC-TGTGCTCTCCATATCTTCAACGAGTGACCAGGACTACACCAAGATGATGAACAAGTTAAACTTAACAAGGAAGATGCTTTGAGGATTTTT---TTTTCTTTTACAAGACCAAGAAACAGAGCTTTAGCACTCGGTGTACACCTGATGTAGGAAAAGAATGTGATTCCTAAAAGTATTCTAGCACAGTTCGCTCTGTTGAATGTACAGATAACTAAAAAACGCCAAAACAAATCTGCTGTGCGGAAGGAAGAATGTTATCTGCCCTTTTGCTTTCTTTAAACCTTACCTTTATATACTATAATTTCCTACTTGACTGAACGGCCAAATCAGGCCGTAAGTCTGTAACTCAGGCCTGTGTTGGTCGCTGGGCTCAGAATTTTGCTGAGGAGCTCGAACAAGTGATTGAATACTCATGATAGCATATGCAATTGCCAGAATTTCTTATGCTGCAGTTTACATGTACCCCTCAAGTTGATATATCTTACTCATACAAGTTAATGGGCAGATCTGCATCTAGCTGGAGAAATACAGTGTGTTCAGCCTTTGAGCAAACTATTGTACGAGCAGCTAATTTCTTACAAATTCTAAGCATCATGAATCCAACGATAGGACGATCACATCTTTTCCAGATCAACCTTTTCCATTACAATTGGATGATCACTTCTGCTTCTTAGGTTTCTTTGGTGGGTTCTTAGCAGGTGCGTCTCCTTCATCATCAGATAATCCCTCGATGGGTTCATCAGGGACATCAGCGGGAGCATTATGCTTGGTGATGTAGCCCTTCAGGATCTCCATGCTCTTCTCCTTCATAGCAGCCAGCTGCTCCGATAGAATACCGGACTCTGAACTGATTGCAAATGATTCTGTTCCAAGAACCAAGCTGGCTTTCACTCTTGAATCAAGACCTGCTGCAGCAGCTGTTTGGTCTTCCATCGACTCTTGAACCTTGAATCGTCGGGACGGCGGCGGCGACGCAGAGGAGAGGCGAACGAGACGAGCGCGCGGCGGCGGCGGCCGTCGGTGAATATGGCGACTCTTTGGCAAACACGCGGGAGGAAGAATGAGAGTTGGGTTGTGGTAGGGGGGAAAAGGA]

[+] EMBL AK072887             [CTCCCATCTCCCATGGCAACCACGGCGGCGGCGTCGCCGCCGGCGATCGCGACCGCGCTCTCCGCCCTGCTGCGGCGACAGAGGAGGAGAAGCAGCCGTTGCGTGGGGGCATCGCACGCCAGATGCCTCGCCGCCGACGCGAATGCTGAGGCGGTGGCGCCGAGCCGGAGGGGAGGCCACGGTGGGACGCGCCTTGAGGAGGCCGTGCCGGCCGGCGAGGGGCGCTCGAGGATCGACGCGTGGATCTCCGCGAGGCTCGGGGGCGGAGGCGTCAGCCGCGCGCGTATCCAGGCGAGCATCCGCGCCGGCCTCGTCGTCGTCAATGGCCGTCCCGTCTCCAAGGTTTCACATATGGTAAAAGGTGGAGACATTGTCAGCTGCACGGTGTTGGAGCTGCAGCCACTGAGAGCAGAGCCAGAGGACATCCCACTGGACATTGTTTATGAGGATGACCATCTTCTCGTTGTGAACAAACCGGCTCATATGGTTGTTCACCCAGCACCAGGAAATGCAAATGGCACCTTAGTCAATGCTATACTTCACCACTGCAAGATTTCAACATTTACCTGTTTAGCACGTAATTCAATTGATGATGAATGCCCTGATTCTTCAGATGATGATATTGATGTGTTTGACATCGATCAATTTACTACTGGCGAAGTAAGTTCAGAAGTCCGTGAAGCTCTTGTGCGTCCTGGTATCGTGCATAGGCTTGATAAGGGTACAAGTGGACTACTTGTTGTAGCCAAGGATGAGCATTCTCATGCACAATTAGCAGAACAATTCAAGCTGCATACAATACGCAGAGTGTACATCAGTCTTACTTGTGGTGCACCGAATCCGAATTCTGGCAGGATTGAAGTTCCTATAGCTCGTGATCCTAACAACCGGATCCGTATGATTGCCACTCCTGGATCAGGCCATAGATATGCACGACATGCCGCTAGTAGGTATAAAGTAAGAGAGGTCTTTGCTGGTGGTGGATCAGCACTAGTAGAGTGGAGATTGGAGACAGGACGAACTCACCAGATTCGAGCACATGCAAAGTACCTAGGGATTCCCCTTCTTGGGGATGAAACATACGGAGGTACCAAAAGCATGGCATTGTCACTTTTGAGACCCAGAACTCCTTCAAGATATCATTGTGATCTTTCAAATATGATATCAAAGATAGACAGGCCATGTCTCCATGCCGCGTTGCTTGGATTTAAGCATCCTCACTCAGGAAAGATCCTTGAATTCTCATGCCCCCCACCAGATGATTTTACTGAGGTACTCAATGAACTTCATCAGGTTACACTGGCAAGTAATGGTAATAGTGGTGGCGGTGTTGCCCGCATTTGTGATTAGTGCAAGGCAGAAATCCACGAAAATGTTGCCGAGGAAATGGTATGCCTGCCTTTTTATCTGACTTCTGCACTCTGATCAAGGGGCAAGACTGCAGATACAGAATTGGAACTGATTATAAAGCTAGCTTCCCTTGTTTCATACTCCGAAGGGAGGGGCCAAAATGTTCTTAATCAGTAGGTCC TGTGCTCTCCATATCTTCAACGAGTGACCAGGACTACACCAAGATGATGAACAAGTTAAACTTAACAAGGAAGATGCTTTGAGGATTTTT   TTTTCTTTTACAAGACCAAGAAACAGAGCTTTAGCACTCGGTGTACACCTGATGTAGGAAAAGAATGTGATTCCTAAAAGTATTCTAGCACAGTTCGCTCTGTTGAATGTACAGATAACTAAAAAACGCCAAAACAAATCTGCTGTGCGGAAGGAAGAATGTTATCTGCCCTTTTGCTTTCTTTAAACCTTACCTTTATATACTATAATTTCCTACTTGACTGAACGGCCAAATCAGGCCGTAAGTCTGTAACTCAGGCCTGTGTTGGTCGCTGGGCTCAGAATTTTGCTGAGGAGCTCGAACAAGTGATTGAATACTCATGATAGCATATGCAATTGCCAGAATTTCTTATGCTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB662780             [                            CGGCGTCGCCGCCGGCGATCGCGACCGCGCTCTCCGCCCTGCTGCGGCGACAGAGGAGGAGAAGCAGCCGTTGCGTGGGGGCATCGCACGCCAGATGCCTCGCCGCCGACGCGAATGCTGAGGCGGTGGCGCCGAGCCGGAGGGGAGGCCACGGTGGGACGCGCCTTGAGGAGGCCGTGCCGGCCGGCGAGGGGCGCTCGAGGATCGACGCGTGGATCTCCGCGAGGCTCGGGGGCGGAGGCGTCAGCCGCGCGCGTATCCAGGCGAGCATCCGCGCCGGCCTCGTCGTCGTCAATGGCCGTCCCGTCTCCAAGGTTTCACATATGGTAAAAGGTGGAGACATTGTCAGCTGCACGGTGTTGGAGCTGCAGCCACTGAGAGCAGAGCCAGAGGACATCCCACTGGACATTGTTTATGAGGATGACCATCTTCTCGTTGTGAACAAACCGGCTCATATGGTTGTTCACCCAGCACCAGGAAATGCAAATGGCACCTTAGTCAATGCTATACTTCACCACTGCAAGATTTCAACATTTACCTGTTTAGCACGTAATTCAATTGATGATGAATGCCCTGATTCTTCAGATGATGATATTGATGTGTTTGACATCGATCAATTTACTACTGGCGAAGTAAGTTCAGAAGTCCGTGAAGCTCTTGTGCGTCCTGGTATCGTGCATAGGCTTGATAAGGGTACAAGTGGACTACTTGTTGTAGCCAAGGATGAGCATTCTCATGCACAATTAGCAGAACAATTCAAGCTGCATACAATACGCAGAGTGTACATCAGTCTTACTTGTGGTGCACCGAATCCGAATTCTGGCAGGATTGAAGTTCCTATAGCTCGTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB662781             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAGTAAGAGAGGTCTTTGCTGGTGGTGGATCAGCACTAGTAGAGTGGAGATTGGAGACAGGACGAACTCACCAGATTCGAGCACATGCAAAGTACCTAGGGATTCCCCTTCTTGGGGATGAAACATACGGAGGTACCAAAAGCATGGCATTGTCACTTTTGAGACCCAGAACTCCTTCAAGATATCATTGTGATCTTTCAAATATGATATCAAAGATAGACAGGCCATGTCTCCATGCCGCGTTGCTTGGATTTAAGCATCCTCACTCAGGAAAGATCCTTGAATTCTCATGCCCCCCACCAGATGATTTTACTGAGGTACTCAATGAACTTCATCAGGTTACACTGGCAAGTAATGGTAATAGTGGTGGCGGTGTTGCCCGCATTTGTGATTAGTGCAAGGCAGAAATCCACGAAAATGTTGCCGAGGAAATGGTATGCCTGCCTTTTTATCTGACTTCTGCACTCTGATCAAGGGGCAAGACTGCAGATACAGAATTGGAACTGATTATAAAGCTAGCTTCCCTTGTTTCATACTCCGAAGGGAGGGGCCAAAATGTTCTTAATCAGTAGGTCCTTGTGCTCTCCATATCTTCAACGAGTGACCAGGACTACACCAAGATGATGAACAAGTTAAACTTAACAAGGAAGATGCTTTGAGGATTTTT   TTTTCTTTTACAAGACCAAGAAACAGAGCTTTAGCACTCGGTGTACACCTGATGTAGGAAAAGAATGTGATTCCTAAAAGTATTCTAGCACAGTTCGCTCTGTTGAATGTACAGATAACTAAAAAACGCCAAAACAAATCTGCTGTGCGGAAGGAAGAATGTTATCTGCCCTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BI806026             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AATTGGAACTGATTATAAAGCTAGCTTCCCTTGTTTCATACTCCGAAGGGA GGGCC AAATGTGCTTAATCAGTAGGTCCTTGTGCTATCCATATCTTCAACGAGTGACCAGGACTACACCAAGATGATGAACAAGTTAAACTTAACAAGGAAGATGCTTTGAGGATTTTTTTGTTTTCTTTTACAAGACCAAGAAACAGAGCTTTAGCACTCGGTGTACACCTGATGTAGGAAAAGAATGTGATTCCTAAAAGTATTCTAGCACAGTTCGCTCTGTTGAATGTACAGATAACTAAAAAACGCC AAACAAATCTGCTGTGCGGAAGGAAGAATGTTATCTGCCCTTTTGCTTTGTTTAAACCTTACCTTTATATACTATAATTTCCTACTTGACTGAACGGCC AATCA GCCGTAAGTCTGTAAaaaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL AK110637             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCATGATAGCATATGCAATTGCCAGAATTTCTTATGCTGCAGTTTACATGTACCCCTCAAGTTGATATATCTTACTCATACAAGTTAATGGGCAGATCTGCATCTAGCTGGAGAAATACAGTGTGTTCAGCCTTTGAGCAAACTATTGTACGAGCAGCTAATTTCTTACAAATTCTAAGCATCATGAATCCAACGATAGGACGATCACATCTTTTCCAGATCAACCTTTTCCATTACAATTGGATGATCACTTCTGCTTCTTAGGTTTCTTTGGTGGGTTCTTAGCAGGTGCGTCTCCTTCATCATCAGATAATCCCTCGATGGGTTCATCAGGGACATCAGCGGGAGCATTATGCTTGGTGATGTAGCCCTTCAGGATCTCCATGCTCTTCTCCTTCATAGCAGCCAGCTGCTCCGATAGAATACCGGACTCTGAACTGATTGCAAATGATTCTGTTCCAAGAACCAAGCTGGCTTTCACTCTTGAATCAAGACCTGCTGCAGCAGCTGTTTGGTCTTCCATCGACTCTTGAACCTTGAATCGTCGGGACGGCGGCGGCGACGCAGAGGAGAGGCGAACGAGACGAGCGCGCGGCGGCGGCGGCCGTCGGTGAATATGGCGACTCTTTGGCAAACACGCGGGAGGAAGAATGAGAGTTGGGTTGTGGTAGGGGGGAAAAGGA]




>consensus_8275#0
CTCCCATCTCCCATGGCAACCACGGCGGCGGCGTCGCCGCCGGCGATCGCGACCGCGCTC
TCCGCCCTGCTGCGGCGACAGAGGAGGAGAAGCAGCCGTTGCGTGGGGGCATCGCACGCC
AGATGCCTCGCCGCCGACGCGAATGCTGAGGCGGTGGCGCCGAGCCGGAGGGGAGGCCAC
GGTGGGACGCGCCTTGAGGAGGCCGTGCCGGCCGGCGAGGGGCGCTCGAGGATCGACGCG
TGGATCTCCGCGAGGCTCGGGGGCGGAGGCGTCAGCCGCGCGCGTATCCAGGCGAGCATC
CGCGCCGGCCTCGTCGTCGTCAATGGCCGTCCCGTCTCCAAGGTTTCACATATGGTAAAA
GGTGGAGACATTGTCAGCTGCACGGTGTTGGAGCTGCAGCCACTGAGAGCAGAGCCAGAG
GACATCCCACTGGACATTGTTTATGAGGATGACCATCTTCTCGTTGTGAACAAACCGGCT
CATATGGTTGTTCACCCAGCACCAGGAAATGCAAATGGCACCTTAGTCAATGCTATACTT
CACCACTGCAAGATTTCAACATTTACCTGTTTAGCACGTAATTCAATTGATGATGAATGC
CCTGATTCTTCAGATGATGATATTGATGTGTTTGACATCGATCAATTTACTACTGGCGAA
GTAAGTTCAGAAGTCCGTGAAGCTCTTGTGCGTCCTGGTATCGTGCATAGGCTTGATAAG
GGTACAAGTGGACTACTTGTTGTAGCCAAGGATGAGCATTCTCATGCACAATTAGCAGAA
CAATTCAAGCTGCATACAATACGCAGAGTGTACATCAGTCTTACTTGTGGTGCACCGAAT
CCGAATTCTGGCAGGATTGAAGTTCCTATAGCTCGTGATCCTAACAACCGGATCCGTATG
ATTGCCACTCCTGGATCAGGCCATAGATATGCACGACATGCCGCTAGTAGGTATAAAGTA
AGAGAGGTCTTTGCTGGTGGTGGATCAGCACTAGTAGAGTGGAGATTGGAGACAGGACGA
ACTCACCAGATTCGAGCACATGCAAAGTACCTAGGGATTCCCCTTCTTGGGGATGAAACA
TACGGAGGTACCAAAAGCATGGCATTGTCACTTTTGAGACCCAGAACTCCTTCAAGATAT
CATTGTGATCTTTCAAATATGATATCAAAGATAGACAGGCCATGTCTCCATGCCGCGTTG
CTTGGATTTAAGCATCCTCACTCAGGAAAGATCCTTGAATTCTCATGCCCCCCACCAGAT
GATTTTACTGAGGTACTCAATGAACTTCATCAGGTTACACTGGCAAGTAATGGTAATAGT
GGTGGCGGTGTTGCCCGCATTTGTGATTAGTGCAAGGCAGAAATCCACGAAAATGTTGCC
GAGGAAATGGTATGCCTGCCTTTTTATCTGACTTCTGCACTCTGATCAAGGGGCAAGACT
GCAGATACAGAATTGGAACTGATTATAAAGCTAGCTTCCCTTGTTTCATACTCCGAAGGG
AGGGGCCAAAATGTTCTTAATCAGTAGGTCCTGTGCTCTCCATATCTTCAACGAGTGACC
AGGACTACACCAAGATGATGAACAAGTTAAACTTAACAAGGAAGATGCTTTGAGGATTTT
TTTTTCTTTTACAAGACCAAGAAACAGAGCTTTAGCACTCGGTGTACACCTGATGTAGGA
AAAGAATGTGATTCCTAAAAGTATTCTAGCACAGTTCGCTCTGTTGAATGTACAGATAAC
TAAAAAACGCCAAAACAAATCTGCTGTGCGGAAGGAAGAATGTTATCTGCCCTTTTGCTT
TCTTTAAACCTTACCTTTATATACTATAATTTCCTACTTGACTGAACGGCCAAATCAGGC
CGTAAGTCTGTAACTCAGGCCTGTGTTGGTCGCTGGGCTCAGAATTTTGCTGAGGAGCTC
GAACAAGTGATTGAATACTCATGATAGCATATGCAATTGCCAGAATTTCTTATGCTGCAG
TTTACATGTACCCCTCAAGTTGATATATCTTACTCATACAAGTTAATGGGCAGATCTGCA
TCTAGCTGGAGAAATACAGTGTGTTCAGCCTTTGAGCAAACTATTGTACGAGCAGCTAAT
TTCTTACAAATTCTAAGCATCATGAATCCAACGATAGGACGATCACATCTTTTCCAGATC
AACCTTTTCCATTACAATTGGATGATCACTTCTGCTTCTTAGGTTTCTTTGGTGGGTTCT
TAGCAGGTGCGTCTCCTTCATCATCAGATAATCCCTCGATGGGTTCATCAGGGACATCAG
CGGGAGCATTATGCTTGGTGATGTAGCCCTTCAGGATCTCCATGCTCTTCTCCTTCATAG
CAGCCAGCTGCTCCGATAGAATACCGGACTCTGAACTGATTGCAAATGATTCTGTTCCAA
GAACCAAGCTGGCTTTCACTCTTGAATCAAGACCTGCTGCAGCAGCTGTTTGGTCTTCCA
TCGACTCTTGAACCTTGAATCGTCGGGACGGCGGCGGCGACGCAGAGGAGAGGCGAACGA
GACGAGCGCGCGGCGGCGGCGGCCGTCGGTGAATATGGCGACTCTTTGGCAAACACGCGG
GAGGAAGAATGAGAGTTGGGTTGTGGTAGGGGGGAAAAGGA
clustalw multiple alignements is not computed in this case