These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8275#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2621 fasta sequence [CTCCCATCTCCCATGGCAACCACGGCGGCGGCGTCGCCGCCGGCGATCGCGACCGCGCTCTCCGCCCTGCTGCGGCGACAGAGGAGGAGAAGCAGCCGTTGCGTGGGGGCATCGCACGCCAGATGCCTCGCCGCCGACGCGAATGCTGAGGCGGTGGCGCCGAGCCGGAGGGGAGGCCACGGTGGGACGCGCCTTGAGGAGGCCGTGCCGGCCGGCGAGGGGCGCTCGAGGATCGACGCGTGGATCTCCGCGAGGCTCGGGGGCGGAGGCGTCAGCCGCGCGCGTATCCAGGCGAGCATCCGCGCCGGCCTCGTCGTCGTCAATGGCCGTCCCGTCTCCAAGGTTTCACATATGGTAAAAGGTGGAGACATTGTCAGCTGCACGGTGTTGGAGCTGCAGCCACTGAGAGCAGAGCCAGAGGACATCCCACTGGACATTGTTTATGAGGATGACCATCTTCTCGTTGTGAACAAACCGGCTCATATGGTTGTTCACCCAGCACCAGGAAATGCAAATGGCACCTTAGTCAATGCTATACTTCACCACTGCAAGATTTCAACATTTACCTGTTTAGCACGTAATTCAATTGATGATGAATGCCCTGATTCTTCAGATGATGATATTGATGTGTTTGACATCGATCAATTTACTACTGGCGAAGTAAGTTCAGAAGTCCGTGAAGCTCTTGTGCGTCCTGGTATCGTGCATAGGCTTGATAAGGGTACAAGTGGACTACTTGTTGTAGCCAAGGATGAGCATTCTCATGCACAATTAGCAGAACAATTCAAGCTGCATACAATACGCAGAGTGTACATCAGTCTTACTTGTGGTGCACCGAATCCGAATTCTGGCAGGATTGAAGTTCCTATAGCTCGTGATCCTAACAACCGGATCCGTATGATTGCCACTCCTGGATCAGGCCATAGATATGCACGACATGCCGCTAGTAGGTATAAAGTAAGAGAGGTCTTTGCTGGTGGTGGATCAGCACTAGTAGAGTGGAGATTGGAGACAGGACGAACTCACCAGATTCGAGCACATGCAAAGTACCTAGGGATTCCCCTTCTTGGGGATGAAACATACGGAGGTACCAAAAGCATGGCATTGTCACTTTTGAGACCCAGAACTCCTTCAAGATATCATTGTGATCTTTCAAATATGATATCAAAGATAGACAGGCCATGTCTCCATGCCGCGTTGCTTGGATTTAAGCATCCTCACTCAGGAAAGATCCTTGAATTCTCATGCCCCCCACCAGATGATTTTACTGAGGTACTCAATGAACTTCATCAGGTTACACTGGCAAGTAATGGTAATAGTGGTGGCGGTGTTGCCCGCATTTGTGATTAGTGCAAGGCAGAAATCCACGAAAATGTTGCCGAGGAAATGGTATGCCTGCCTTTTTATCTGACTTCTGCACTCTGATCAAGGGGCAAGACTGCAGATACAGAATTGGAACTGATTATAAAGCTAGCTTCCCTTGTTTCATACTCCGAAGGGAGGGGCCAAAATGTTCTTAATCAGTAGGTCC-TGTGCTCTCCATATCTTCAACGAGTGACCAGGACTACACCAAGATGATGAACAAGTTAAACTTAACAAGGAAGATGCTTTGAGGATTTTT---TTTTCTTTTACAAGACCAAGAAACAGAGCTTTAGCACTCGGTGTACACCTGATGTAGGAAAAGAATGTGATTCCTAAAAGTATTCTAGCACAGTTCGCTCTGTTGAATGTACAGATAACTAAAAAACGCCAAAACAAATCTGCTGTGCGGAAGGAAGAATGTTATCTGCCCTTTTGCTTTCTTTAAACCTTACCTTTATATACTATAATTTCCTACTTGACTGAACGGCCAAATCAGGCCGTAAGTCTGTAACTCAGGCCTGTGTTGGTCGCTGGGCTCAGAATTTTGCTGAGGAGCTCGAACAAGTGATTGAATACTCATGATAGCATATGCAATTGCCAGAATTTCTTATGCTGCAGTTTACATGTACCCCTCAAGTTGATATATCTTACTCATACAAGTTAATGGGCAGATCTGCATCTAGCTGGAGAAATACAGTGTGTTCAGCCTTTGAGCAAACTATTGTACGAGCAGCTAATTTCTTACAAATTCTAAGCATCATGAATCCAACGATAGGACGATCACATCTTTTCCAGATCAACCTTTTCCATTACAATTGGATGATCACTTCTGCTTCTTAGGTTTCTTTGGTGGGTTCTTAGCAGGTGCGTCTCCTTCATCATCAGATAATCCCTCGATGGGTTCATCAGGGACATCAGCGGGAGCATTATGCTTGGTGATGTAGCCCTTCAGGATCTCCATGCTCTTCTCCTTCATAGCAGCCAGCTGCTCCGATAGAATACCGGACTCTGAACTGATTGCAAATGATTCTGTTCCAAGAACCAAGCTGGCTTTCACTCTTGAATCAAGACCTGCTGCAGCAGCTGTTTGGTCTTCCATCGACTCTTGAACCTTGAATCGTCGGGACGGCGGCGGCGACGCAGAGGAGAGGCGAACGAGACGAGCGCGCGGCGGCGGCGGCCGTCGGTGAATATGGCGACTCTTTGGCAAACACGCGGGAGGAAGAATGAGAGTTGGGTTGTGGTAGGGGGGAAAAGGA] [+] EMBL AK072887 [CTCCCATCTCCCATGGCAACCACGGCGGCGGCGTCGCCGCCGGCGATCGCGACCGCGCTCTCCGCCCTGCTGCGGCGACAGAGGAGGAGAAGCAGCCGTTGCGTGGGGGCATCGCACGCCAGATGCCTCGCCGCCGACGCGAATGCTGAGGCGGTGGCGCCGAGCCGGAGGGGAGGCCACGGTGGGACGCGCCTTGAGGAGGCCGTGCCGGCCGGCGAGGGGCGCTCGAGGATCGACGCGTGGATCTCCGCGAGGCTCGGGGGCGGAGGCGTCAGCCGCGCGCGTATCCAGGCGAGCATCCGCGCCGGCCTCGTCGTCGTCAATGGCCGTCCCGTCTCCAAGGTTTCACATATGGTAAAAGGTGGAGACATTGTCAGCTGCACGGTGTTGGAGCTGCAGCCACTGAGAGCAGAGCCAGAGGACATCCCACTGGACATTGTTTATGAGGATGACCATCTTCTCGTTGTGAACAAACCGGCTCATATGGTTGTTCACCCAGCACCAGGAAATGCAAATGGCACCTTAGTCAATGCTATACTTCACCACTGCAAGATTTCAACATTTACCTGTTTAGCACGTAATTCAATTGATGATGAATGCCCTGATTCTTCAGATGATGATATTGATGTGTTTGACATCGATCAATTTACTACTGGCGAAGTAAGTTCAGAAGTCCGTGAAGCTCTTGTGCGTCCTGGTATCGTGCATAGGCTTGATAAGGGTACAAGTGGACTACTTGTTGTAGCCAAGGATGAGCATTCTCATGCACAATTAGCAGAACAATTCAAGCTGCATACAATACGCAGAGTGTACATCAGTCTTACTTGTGGTGCACCGAATCCGAATTCTGGCAGGATTGAAGTTCCTATAGCTCGTGATCCTAACAACCGGATCCGTATGATTGCCACTCCTGGATCAGGCCATAGATATGCACGACATGCCGCTAGTAGGTATAAAGTAAGAGAGGTCTTTGCTGGTGGTGGATCAGCACTAGTAGAGTGGAGATTGGAGACAGGACGAACTCACCAGATTCGAGCACATGCAAAGTACCTAGGGATTCCCCTTCTTGGGGATGAAACATACGGAGGTACCAAAAGCATGGCATTGTCACTTTTGAGACCCAGAACTCCTTCAAGATATCATTGTGATCTTTCAAATATGATATCAAAGATAGACAGGCCATGTCTCCATGCCGCGTTGCTTGGATTTAAGCATCCTCACTCAGGAAAGATCCTTGAATTCTCATGCCCCCCACCAGATGATTTTACTGAGGTACTCAATGAACTTCATCAGGTTACACTGGCAAGTAATGGTAATAGTGGTGGCGGTGTTGCCCGCATTTGTGATTAGTGCAAGGCAGAAATCCACGAAAATGTTGCCGAGGAAATGGTATGCCTGCCTTTTTATCTGACTTCTGCACTCTGATCAAGGGGCAAGACTGCAGATACAGAATTGGAACTGATTATAAAGCTAGCTTCCCTTGTTTCATACTCCGAAGGGAGGGGCCAAAATGTTCTTAATCAGTAGGTCC TGTGCTCTCCATATCTTCAACGAGTGACCAGGACTACACCAAGATGATGAACAAGTTAAACTTAACAAGGAAGATGCTTTGAGGATTTTT TTTTCTTTTACAAGACCAAGAAACAGAGCTTTAGCACTCGGTGTACACCTGATGTAGGAAAAGAATGTGATTCCTAAAAGTATTCTAGCACAGTTCGCTCTGTTGAATGTACAGATAACTAAAAAACGCCAAAACAAATCTGCTGTGCGGAAGGAAGAATGTTATCTGCCCTTTTGCTTTCTTTAAACCTTACCTTTATATACTATAATTTCCTACTTGACTGAACGGCCAAATCAGGCCGTAAGTCTGTAACTCAGGCCTGTGTTGGTCGCTGGGCTCAGAATTTTGCTGAGGAGCTCGAACAAGTGATTGAATACTCATGATAGCATATGCAATTGCCAGAATTTCTTATGCTGCA ] [+] EMBL CB662780 [ CGGCGTCGCCGCCGGCGATCGCGACCGCGCTCTCCGCCCTGCTGCGGCGACAGAGGAGGAGAAGCAGCCGTTGCGTGGGGGCATCGCACGCCAGATGCCTCGCCGCCGACGCGAATGCTGAGGCGGTGGCGCCGAGCCGGAGGGGAGGCCACGGTGGGACGCGCCTTGAGGAGGCCGTGCCGGCCGGCGAGGGGCGCTCGAGGATCGACGCGTGGATCTCCGCGAGGCTCGGGGGCGGAGGCGTCAGCCGCGCGCGTATCCAGGCGAGCATCCGCGCCGGCCTCGTCGTCGTCAATGGCCGTCCCGTCTCCAAGGTTTCACATATGGTAAAAGGTGGAGACATTGTCAGCTGCACGGTGTTGGAGCTGCAGCCACTGAGAGCAGAGCCAGAGGACATCCCACTGGACATTGTTTATGAGGATGACCATCTTCTCGTTGTGAACAAACCGGCTCATATGGTTGTTCACCCAGCACCAGGAAATGCAAATGGCACCTTAGTCAATGCTATACTTCACCACTGCAAGATTTCAACATTTACCTGTTTAGCACGTAATTCAATTGATGATGAATGCCCTGATTCTTCAGATGATGATATTGATGTGTTTGACATCGATCAATTTACTACTGGCGAAGTAAGTTCAGAAGTCCGTGAAGCTCTTGTGCGTCCTGGTATCGTGCATAGGCTTGATAAGGGTACAAGTGGACTACTTGTTGTAGCCAAGGATGAGCATTCTCATGCACAATTAGCAGAACAATTCAAGCTGCATACAATACGCAGAGTGTACATCAGTCTTACTTGTGGTGCACCGAATCCGAATTCTGGCAGGATTGAAGTTCCTATAGCTCGTGAT ] [-] EMBL CB662781 [ AAGTAAGAGAGGTCTTTGCTGGTGGTGGATCAGCACTAGTAGAGTGGAGATTGGAGACAGGACGAACTCACCAGATTCGAGCACATGCAAAGTACCTAGGGATTCCCCTTCTTGGGGATGAAACATACGGAGGTACCAAAAGCATGGCATTGTCACTTTTGAGACCCAGAACTCCTTCAAGATATCATTGTGATCTTTCAAATATGATATCAAAGATAGACAGGCCATGTCTCCATGCCGCGTTGCTTGGATTTAAGCATCCTCACTCAGGAAAGATCCTTGAATTCTCATGCCCCCCACCAGATGATTTTACTGAGGTACTCAATGAACTTCATCAGGTTACACTGGCAAGTAATGGTAATAGTGGTGGCGGTGTTGCCCGCATTTGTGATTAGTGCAAGGCAGAAATCCACGAAAATGTTGCCGAGGAAATGGTATGCCTGCCTTTTTATCTGACTTCTGCACTCTGATCAAGGGGCAAGACTGCAGATACAGAATTGGAACTGATTATAAAGCTAGCTTCCCTTGTTTCATACTCCGAAGGGAGGGGCCAAAATGTTCTTAATCAGTAGGTCCTTGTGCTCTCCATATCTTCAACGAGTGACCAGGACTACACCAAGATGATGAACAAGTTAAACTTAACAAGGAAGATGCTTTGAGGATTTTT TTTTCTTTTACAAGACCAAGAAACAGAGCTTTAGCACTCGGTGTACACCTGATGTAGGAAAAGAATGTGATTCCTAAAAGTATTCTAGCACAGTTCGCTCTGTTGAATGTACAGATAACTAAAAAACGCCAAAACAAATCTGCTGTGCGGAAGGAAGAATGTTATCTGCCCTTTT ] [+] EMBL BI806026 [ AATTGGAACTGATTATAAAGCTAGCTTCCCTTGTTTCATACTCCGAAGGGA GGGCC AAATGTGCTTAATCAGTAGGTCCTTGTGCTATCCATATCTTCAACGAGTGACCAGGACTACACCAAGATGATGAACAAGTTAAACTTAACAAGGAAGATGCTTTGAGGATTTTTTTGTTTTCTTTTACAAGACCAAGAAACAGAGCTTTAGCACTCGGTGTACACCTGATGTAGGAAAAGAATGTGATTCCTAAAAGTATTCTAGCACAGTTCGCTCTGTTGAATGTACAGATAACTAAAAAACGCC AAACAAATCTGCTGTGCGGAAGGAAGAATGTTATCTGCCCTTTTGCTTTGTTTAAACCTTACCTTTATATACTATAATTTCCTACTTGACTGAACGGCC AATCA GCCGTAAGTCTGTAAaaaaaaaa ] [-] EMBL AK110637 [ TCATGATAGCATATGCAATTGCCAGAATTTCTTATGCTGCAGTTTACATGTACCCCTCAAGTTGATATATCTTACTCATACAAGTTAATGGGCAGATCTGCATCTAGCTGGAGAAATACAGTGTGTTCAGCCTTTGAGCAAACTATTGTACGAGCAGCTAATTTCTTACAAATTCTAAGCATCATGAATCCAACGATAGGACGATCACATCTTTTCCAGATCAACCTTTTCCATTACAATTGGATGATCACTTCTGCTTCTTAGGTTTCTTTGGTGGGTTCTTAGCAGGTGCGTCTCCTTCATCATCAGATAATCCCTCGATGGGTTCATCAGGGACATCAGCGGGAGCATTATGCTTGGTGATGTAGCCCTTCAGGATCTCCATGCTCTTCTCCTTCATAGCAGCCAGCTGCTCCGATAGAATACCGGACTCTGAACTGATTGCAAATGATTCTGTTCCAAGAACCAAGCTGGCTTTCACTCTTGAATCAAGACCTGCTGCAGCAGCTGTTTGGTCTTCCATCGACTCTTGAACCTTGAATCGTCGGGACGGCGGCGGCGACGCAGAGGAGAGGCGAACGAGACGAGCGCGCGGCGGCGGCGGCCGTCGGTGAATATGGCGACTCTTTGGCAAACACGCGGGAGGAAGAATGAGAGTTGGGTTGTGGTAGGGGGGAAAAGGA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||