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Oryza sativa
cluster # 8279 cluster # 8279       Sequences # 5       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8279#0 length = 3225 sequences # 4  
 consensus_8279#1 length = 686 sequences # 1  
consensusID : consensus_8279#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 3225
fasta sequence 
                              [ACGCGAACACGCTGCCAATGGCGGCGAGCACTCGAGCCCTCTTCCTCTCCTGCTTCCACGGAAGCGGCGGCGGCGGCGGCACTTCCGAGGTGAGCCGCCGCCTCGTGCTGCGGCCGCGGTACCCGTCCATGCCGCGGCGACCGAGGTCGGCCGCGGTCGCCGGAGAGGGAGGGGAAGGAGGAGGAGGAGGAGGCGACGGCGATCTGGAGGCGGCGGCCGTGGGGGCGGAGGAGGAGGAGAAGGTGGCGGTGTTCGAGGTGTCCGGGATGACGTGCGCCGCGTGCGCGGGCTCGGTGGAGAAGGCCGTCAAGCGGCTCCAGGGCATCCACGACGCCGCCGTCGACGTCCTCGGGGGCCGCGCGCAGGTCGTCTTCTACCCGGCGTTCGTCTCGGAGGAAAAAATTAGGGAAACCATCCAGGATGTGGGCTTTGAAGCTAAGCTGATTGATGAGGAAGTCAAGGAAAAAAACATTCTAGTATGCAGGCTGCACATAAAAGGAATGACCTGCACATCTTGTGCGAGCACAGTGGAATCCATCTTGCAAGTTGTTCCTGGTGTTCAGAGAGCTTCTGTCGCATTGGCTACTGAAGAGGCAGAAATCCGTTATGACCGTAGAATCGTTACTGCCAGTCAACTAACCCATGCAGTTGAAGAGACGGGTTTTGAAGCAATACTGATCACCACTGGAGATGATCAGAGCAGGATAGACCTCAAAGTGGATGGCACACTCAACGAGAGATCAATCATGATAGTGAAAAGCTCTGTCCAAGCTCTTCCTGGTGTGGAAGACATAAAAGTTGATCCTGAGCTCCACAAGATCACCATCTCATACAAACCTGACCAGACAGGTCCTCGAGACCTCATTGAAGTCATTGAGTCAGCTGCCTCTGGTGATCTTACTGTATCGATATACCCAGAAGCAGATGGAAGGCAGCAGCATAGACATGGGGAGATCAAGCGATACAGGCAGTCTTTCTTGTGGAGTTTAGTATTCACCATCCCGGTATTCCTCACCTCCATGGTGTTCATGTACATCCCAGGGCTGAAGGATGGGCTCGAAAAGAAGGTTATTAACATGATGAGCATTGGTGAGCTCTTGCGGTGGATTTTGTCAACGCCAGTTCAATTTGTAATTGGCCGCAGATTTTATACTGGTGCTTATAAAGCGTTATCCCACGGCTCATCAAACATGGATGTACTCATTGCTCTTGGGACCAACACAGCTTACTTCTACTCAGTTTACTCCATCCTCCGAGCTGCCTCCTCACATAATTACATGGCAACTGATTTTTTTGAAACTAGTTCAATGCTCATATCGTTTATCCTTCTTGGAAAGTACCTTGAGATCTTGGCAAAAGGGAAGACCTCTGAGGCTATTGCCAAGCTTATGGATCTTGCACCAGAAACTGCAACTATGTTGATATATGATCATGAAGGGAATGTTGTGGGCGAGAAGGAAATTGACAGTAGGTTGATTCAGAAAAATGATGTGATCAAAGTAGTCCCAGGTGGGAAAGTTGCTTCTGATGGCTTTGTTATATGGGGACAGAGCCATGTGAATGAAAGCATGATCACCGGAGAATCACGACCTGTGGCAAAGAGGAAGGGTGACACTGTCATAGGAGGGACGGTGAATGAGAATGGTGTGCTTCATGTCCGTGCAACATTTGTTGGATCAGAGAGTGCCCTTGCACAGATTGTACGGCTAGTAGAGTCAGCGCAAATGGCAAAAGCTCCTGTACAAAAGTTTGCTGATCAGATATCTAGAGTCTTTGTTCCCCTGGTCATCATTCTTTCTTTGCTTACTTGGCTTGCTTGGTTCTTAGCTGGGAGGCTTCATGGTTACCCTAACTCATGGATACCATCTTCCATGGATAGCTTTCAACTAGCTCTCCAATTCGGGATATCAGTTATGGTTATTGCATGCCCTTGCGCCTTAGGGCTTGCAACTCCAACAGCTGTGATGGTTGCTACTGGAGTTGGTGCCTCACAAGGAGTTCTTATCAAGGGTGGGCAAGCTCTGGAGAGTGCACAGAAGGTCGACTGCATCGTTTTCGACAAGACAGGGACACTAACCATTGGGAAGCCTGTTGTGGTCAACACAAGACTGTTAAAAAACATGGTCTTGCGTGAATTCTATGCTTACGTTGCAGCAGCAGAGGTCAACAGTGAGCACCCACTGGGTAAGGCAGTCGTGGAGCATGCCAAGAAGTTCCATTCGGAAGAGAGCCATGTCTGGACTGAAGCAAGGGATTTCATTTCAGTGACAGGGCACGGTGTCAAGGCAAAAATAAGTGGCAGGGCTGTTATGGTGGGAAACAAGAGCTTTATGTTGACTTCAGGCATTGATATCCCGGTGGAAGCTTTGGAAATCCTAACGGAAGAAGAGGAGAAGGCCCAAACAGCGATCATTGTGGCTATGGATCAAGAAGTCGTGGGCATTATCTCTGTATCTGATCCAATAAAACCAAATGCCCGCGAAGTGATTTCGTATCTCAAATCTATGAAGGTGGAGAGTATAATGGTGACTGGGGACAACTGGGGGACTGCCAATGCCATTAGCAAAGAGGTTGGCATTGAGAACACAGTTGCAGAAGCGAAACCAGAGCAGAAAGCTGAGAAGGTGAAAGAACTTCAGTCGGCCGGAAGGACCGTGGCAATGGTTGGTGATGGAATCAACGATTCTCCAGCGCTTGTATCAGCCGACGTTGGCCTGGCGATTGGCGCAGGCACTGACGTCGCCATTGAAGCGGCCGACATCGTCCTCATGAAGAGCAACCTGGAAGACGTGATCACCGCCATCGATCTGTCCAGAAAAACCTTCTTCCGCATACGGATGAACTACGTCTGGGCGCTCGGCTACAACATCATCGGCATACCGATCGCTGCCGGGGTGCTCTTCCCGTCGACCCGGTTCCGCTTGCCGCCATGGGTCGCCGGCGCTGCGATGGCTGCTTCCTCCGTTAGCGTCGTCTGCTGGTCCCTGCTGTTGAGGTACTACAAGAGCCCAAAACTGGGCCGTTGATCATGCAGTACACACGCATAGCATTTGCTTAGAATAAGAGGTGTAGATATCTGTTGACAATGTGCTAATGTGGTTCTAAAAGAAATGTGCTAGTGTGTGTTGTGTGGCACCTGAAATGTGTACATTACCTACGTATATATGCACCGTGTGTTTACAAGTGTTAAATATGGAGCACTTTGCCAACACTAGCAGGTGATAC]

[+] EMBL AK072990             [ACGCGAACACGCTGCCAATGGCGGCGAGCACTCGAGCCCTCTTCCTCTCCTGCTTCCACGGAAGCGGCGGCGGCGGCGGCACTTCCGAGGTGAGCCGCCGCCTCGTGCTGCGGCCGCGGTACCCGTCCATGCCGCGGCGACCGAGGTCGGCCGCGGTCGCCGGAGAGGGAGGGGAAGGAGGAGGAGGAGGAGGCGACGGCGATCTGGAGGCGGCGGCCGTGGGGGCGGAGGAGGAGGAGAAGGTGGCGGTGTTCGAGGTGTCCGGGATGACGTGCGCCGCGTGCGCGGGCTCGGTGGAGAAGGCCGTCAAGCGGCTCCAGGGCATCCACGACGCCGCCGTCGACGTCCTCGGGGGCCGCGCGCAGGTCGTCTTCTACCCGGCGTTCGTCTCGGAGGAAAAAATTAGGGAAACCATCCAGGATGTGGGCTTTGAAGCTAAGCTGATTGATGAGGAAGTCAAGGAAAAAAACATTCTAGTATGCAGGCTGCACATAAAAGGAATGACCTGCACATCTTGTGCGAGCACAGTGGAATCCATCTTGCAAGTTGTTCCTGGTGTTCAGAGAGCTTCTGTCGCATTGGCTACTGAAGAGGCAGAAATCCGTTATGACCGTAGAATCGTTACTGCCAGTCAACTAACCCATGCAGTTGAAGAGACGGGTTTTGAAGCAATACTGATCACCACTGGAGATGATCAGAGCAGGATAGACCTCAAAGTGGATGGCACACTCAACGAGAGATCAATCATGATAGTGAAAAGCTCTGTCCAAGCTCTTCCTGGTGTGGAAGACATAAAAGTTGATCCTGAGCTCCACAAGATCACCATCTCATACAAACCTGACCAGACAGGTCCTCGAGACCTCATTGAAGTCATTGAGTCAGCTGCCTCTGGTGATCTTACTGTATCGATATACCCAGAAGCAGATGGAAGGCAGCAGCATAGACATGGGGAGATCAAGCGATACAGGCAGTCTTTCTTGTGGAGTTTAGTATTCACCATCCCGGTATTCCTCACCTCCATGGTGTTCATGTACATCCCAGGGCTGAAGGATGGGCTCGAAAAGAAGGTTATTAACATGATGAGCATTGGTGAGCTCTTGCGGTGGATTTTGTCAACGCCAGTTCAATTTGTAATTGGCCGCAGATTTTATACTGGTGCTTATAAAGCGTTATCCCACGGCTCATCAAACATGGATGTACTCATTGCTCTTGGGACCAACACAGCTTACTTCTACTCAGTTTACTCCATCCTCCGAGCTGCCTCCTCACATAATTACATGGCAACTGATTTTTTTGAAACTAGTTCAATGCTCATATCGTTTATCCTTCTTGGAAAGTACCTTGAGATCTTGGCAAAAGGGAAGACCTCTGAGGCTATTGCCAAGCTTATGGATCTTGCACCAGAAACTGCAACTATGTTGATATATGATCATGAAGGGAATGTTGTGGGCGAGAAGGAAATTGACAGTAGGTTGATTCAGAAAAATGATGTGATCAAAGTAGTCCCAGGTGGGAAAGTTGCTTCTGATGGCTTTGTTATATGGGGACAGAGCCATGTGAATGAAAGCATGATCACCGGAGAATCACGACCTGTGGCAAAGAGGAAGGGTGACACTGTCATAGGAGGGACGGTGAATGAGAATGGTGTGCTTCATGTCCGTGCAACATTTGTTGGATCAGAGAGTGCCCTTGCACAGATTGTACGGCTAGTAGAGTCAGCGCAAATGGCAAAAGCTCCTGTACAAAAGTTTGCTGATCAGATATCTAGAGTCTTTGTTCCCCTGGTCATCATTCTTTCTTTGCTTACTTGGCTTGCTTGGTTCTTAGCTGGGAGGCTTCATGGTTACCCTAACTCATGGATACCATCTTCCATGGATAGCTTTCAACTAGCTCTCCAATTCGGGATATCAGTTATGGTTATTGCATGCCCTTGCGCCTTAGGGCTTGCAACTCCAACAGCTGTGATGGTTGCTACTGGAGTTGGTGCCTCACAAGGAGTTCTTATCAAGGGTGGGCAAGCTCTGGAGAGTGCACAGAAGGTCGACTGCATCGTTTTCGACAAGACAGGGACACTAACCATTGGGAAGCCTGTTGTGGTCAACACAAGACTGTTAAAAAACATGGTCTTGCGTGAATTCTATGCTTACGTTGCAGCAGCAGAGGTCAACAGTGAGCACCCACTGGGTAAGGCAGTCGTGGAGCATGCCAAGAAGTTCCATTCGGAAGAGAGCCATGTCTGGACTGAAGCAAGGGATTTCATTTCAGTGACAGGGCACGGTGTCAAGGCAAAAATAAGTGGCAGGGCTGTTATGGTGGGAAACAAGAGCTTTATGTTGACTTCAGGCATTGATATCCCGGTGGAAGCTTTGGAAATCCTAACGGAAGAAGGGGAGAAGGCCCAAACAGCGATCATTGTGGCTATGGATCAAGAAGTCGTGGGCATTATCTCTGTATCTGATCCAATAAAACCAAATGCCCGCGAAGTGATTTCGTATCTCAAATCTATGAAGGTGGAGAGTATAATGGTGACTGGGGACAACTGGGGGACTGCCAATGCCATTAGCAAAGAGGTTGGCATTGAGAACACAGTTGCAGAAGCGAAACCAGAGCAGAAAGCTGAGAAGGTGAAAGAACTTCAGTCGGCCGGAAGGACCGTGGCAATGGTTGGTGATGGAATCAACGATTCTCCAGCGCTTGTATCAGCCGACGTTGGCCTGGCGATTGGCGCAGGCACTGACGTCGCCATTGAAGCGGCCGACATCGTCCTCATGAAGAGCAACCTGGAAGACGTGATCACCGCCATCGATCTGTCCAGAAAAACCTTCTTCCGCATACGGATGAACTACGTCTGGGCGCTCGGCTACAACATCATCGGCATACCGATCGCTGCCGGGGTGCTCTTCCCGTCGACCCGGTTCCGCTTGCCGCCATGGGTCGCCGGCGCTGCGATGGCTGCTTCCTCCGTTAGCGTCGTCTGCTGGTCCCTGCTGTTGAGGTACTACAAGAGCCCAAAACTGGGCCGTTGATCATGCAGTACACACGCATAGCATTTGCTTAGAATAAGAGGTGTAGATATCTGTTGACAATGTGCTAATGTGGTTCTAAAAGAAATGTGCTAGTGTGTGTTGTGTGGCACCTGAAATGTGTACATTACCTACGTATATATGCACCGTGTGTT                                               ]
[+] EMBL AK063759             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTTCAATGCTCATATCGTTTATCCTTCTTGGAAAGTACCTTGAGATCTTGGCAAAAGGGAAGACCTCTGAGGCTATTGCCAAGCTTATGGATCTTGCACCAGAAACTGCAACTATGTTGATATATGATCATGAAGGGAATGTTGTGGGCGAGAAGGAAATTGACAGTAGGTTGATTCAGAAAAATGATGTGATCAAAGTAGTCCCAGGTGGGAAAGTTGCTTCTGATGGCTTTGTTATATGGGGACAGAGCCATGTGAATGAAAGCATGATCACCGGAGAATCACGACCTGTGGCAAAGAGGAAGGGTGACACTGTCATAGGAGGGACGGTGAATGAGAATGGTGTGCTTCATGTCCGTGCAACATTTGTTGGATCAGAGAGTGCCCTTGCACAGATTGTACGGCTAGTAGAGTCAGCGCAAATGGCAAAAGCTCCTGTACAAAAGTTTGCTGATCAGATATCTAGAGTCTTTGTTCCCCTGGTCATCATTCTTTCTTTGCTTACTTGGCTTGCTTGGTTCTTAGCTGGGAGGCTTCATGGTTACCCTAACTCATGGATACCATCTTCCATGGATAGCTTTCAACTAGCTCTCCAATTCGGGATATCAGTTATGGTTATTGCATGCCCTTGCGCCTTAGGGCTTGCAACTCCAACAGCTGTGATGGTTGCTACTGGAGTTGGTGCCTCACAAGGAGTTCTTATCAAGGGTGGGCAAGCTCTGGAGAGTGCACAGAAGGTCGACTGCATCGTTTTCGACAAGACAGGGACACTAACCATTGGGAAGCCTGTTGTGGTCAACACAAGACTGTTAAAAAACATGGTCTTGCGTGAATTCTATGCTTACGTTGCAGCAGCAGAGGTCAACAGTGAGCACCCACTGGGTAAGGCAGTCGTGGAGCATGCCAAGAAGTTCCATTCGGAAGAGAGCCATGTCTGGACTGAAGCAAGGGATTTCATTTCAGTGACAGGGCACGGTGTCAAGGCAAAAATAAGTGGCAGGGCTGTTATGGTGGGAAACAAGAGCTTTATGTTGACTTCAGGCATTGATATCCCGGTGAAAGCTTTGGAAATCCTAACGGAAGAAGAGGAGAAGGCCCAAACAGCGATCATTGTGGCTATGGATCAAGAAGTCGTGGGCATTATCTCTGTATCTGATCCAATAAAACCAAATGCCCGCGAAGTGATTTCGTATCTCAAATCTATGAAGGTGGAGAGTATAATGGTGACTGGGGACAACTGGGGGACTGCCAATGCCATTAGCAAAGAGGTTGGCATTGAGAACACAGTTGCAGAAGCGAAACCAGAGCAGAAAGCTGAGAAGGTGAAAGAACTTCAGTCGGCCGGAAGGACCGTGGCAATGGTTGGTGATGGAATCAACGATTCTCCAGCGCTTGTATCAGCCGACGTTGGCCTGGCGATTGGCGCAGGCACTGACGTCGCCATTGAAGCGGCCGACATCGTCCTCATGAAGAGCAACCTGGAAGACGTGATCACCGCCATCGATCTGTCCAGAAAAACCTTCTTCCGCATACGGATGAACTACGTCTGGGCGCTCGGCTACAACATCATCGGCATACCGATCGCTGCCGGGGTGCTCTTCCCGTCGACCCGGTTCCGCTTGCCGCCATGGGTCGCCGGCGCTGCGATGGCTGCTTCCTCCGTTAGCGTCGTCTGCTGGTCCCTGCTGTTGAGGTACTACAAGAGCCCAAAACTGGGCCGTTGATCATGCAGTACACACGCATAGCATTTGCTTAGAATAAGAGGTGTAGATATCTGTTGACAATGTGCTAATGTGGTTCTAAAAGAAATGTGCTAGTGTGTGTTGTGTGGCACCTGAAATGTGTACATTACCTACGTATATATGCACCGTGTGTTTACAAGTGTTAAATATGGAGCACTTTGCCAACACTAGCAGGTGATAC]
[+] EMBL CB646077             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGGGAAACAAGAGCTTTATGTTGACTTCAGGCATTGATATCCCGGTGGAAGCTTTGGAAATCCTAACGGAAGAAGAGGAGAAGGCCCAAACAGCGATCATTGTGGCTATGGATCAAGAAGTCGTGGGCATTATCTCTGTATCTGATCCAATAAAACCAAATGCCCGCGAAGTGATTTCGTATCTCAAATCTATGAAGGTGGAGAGTATAATGGTGACTGGGGACAACTGGGGGACTGCCAATGCCATTAGCAAAGAGGTTGGCATTGAGAACACAGTTGCAGAAGCGAAACCAGAGCAGAAAGCTGAGAAGGTGAAAGAACTTCAGTCGGCCGGAAGGACCGTGGCAATGGTTGGTGATGGAATCAACGATTCTCCAGCGCTTGTATCAGCCGACGTTGGCCTGGCGATTGGCGCAGGCACTGACGTCGCCATTGAAGCGGCCGACATCGTCCTCATGAAGAGCAACCTGGAAGACGTGATCACCGCCATCGATCTGTCCAGAAAAACCTTCTTCCGCATACGGATGAACTACGTCTGGGCGCTCGGCTACAACATCATCGGCATACCGATCGCTGCCGGGGTGCTCTTCCCGTCGACCCGGTTCCGCTTGCCGCCATGGGTCGCCGGCGCTGCGATGGCTGCTTCCTCCGTTAGCGTCGTCTGCTGGTCCCTGCTGTTGAGGTACTACAAGAGCCCAAAACTGGGCCGTTGATCATGCAGTACACACGCATAGCATTTGCTTAGAATAAGAGGTGTAGATATCTGTTGACAATGTGCTAATGTGGTTCTAAAAGAAATGTGCTAGT                                                                                                         ]
[+] EMBL CA766376             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             aGGGGACTGCCAATGCCATTAGCAAAGAGGTTGGCATTGAGAACACAGTTGCAGAAGCGAAACCAGAGCAGAAAGCTGAGAAGGTGAAAGAACCTCAGTCGGCCGGAAGGACCGTGGCAATGGTTGGTGATGGAATCAACGATTCTCCAGCGCTTGTATCAGCCGACGTTGGCCTGGCGATTGGCGCAGGCACTGACGTCGCCATTGAAGCGGCCGACATCGTCCTCATGAAGAGCAACCTGGAAGACGTGATCACCGCCATCGATCTGTCCAGAAAAACCTTCTTCCGCATACGGATGAACTACGTCTGGNCGCTCGGCTACAACATCATCGGCATACCGATCGCTGCCGGGGTGCTCTTCCCGTCGACCCGGTTCCGCTTGCCGCCATGGGTCGCCGGCGCTGCGATGGCTGCTTCCTCCGTTAGCGTCGTCTGCTGGTCCCTGCTGTTGAGGTACTACAAGAGCCCAAAACTGGGCCGTTGATCATGCAGTACACACGCATAGCATTTGCTTAGAATAAGAGGTGTAGATATCTGTTGACAATGTGCTAATGTGGTTCTAAAAGAAATGTGCTAGTGTGTGTTGTGTGGCACCTGAAATGTGTACATTACCTACGTATATATGCACCGTGTGTTTACAAG                                         ]




>consensus_8279#0
ACGCGAACACGCTGCCAATGGCGGCGAGCACTCGAGCCCTCTTCCTCTCCTGCTTCCACG
GAAGCGGCGGCGGCGGCGGCACTTCCGAGGTGAGCCGCCGCCTCGTGCTGCGGCCGCGGT
ACCCGTCCATGCCGCGGCGACCGAGGTCGGCCGCGGTCGCCGGAGAGGGAGGGGAAGGAG
GAGGAGGAGGAGGCGACGGCGATCTGGAGGCGGCGGCCGTGGGGGCGGAGGAGGAGGAGA
AGGTGGCGGTGTTCGAGGTGTCCGGGATGACGTGCGCCGCGTGCGCGGGCTCGGTGGAGA
AGGCCGTCAAGCGGCTCCAGGGCATCCACGACGCCGCCGTCGACGTCCTCGGGGGCCGCG
CGCAGGTCGTCTTCTACCCGGCGTTCGTCTCGGAGGAAAAAATTAGGGAAACCATCCAGG
ATGTGGGCTTTGAAGCTAAGCTGATTGATGAGGAAGTCAAGGAAAAAAACATTCTAGTAT
GCAGGCTGCACATAAAAGGAATGACCTGCACATCTTGTGCGAGCACAGTGGAATCCATCT
TGCAAGTTGTTCCTGGTGTTCAGAGAGCTTCTGTCGCATTGGCTACTGAAGAGGCAGAAA
TCCGTTATGACCGTAGAATCGTTACTGCCAGTCAACTAACCCATGCAGTTGAAGAGACGG
GTTTTGAAGCAATACTGATCACCACTGGAGATGATCAGAGCAGGATAGACCTCAAAGTGG
ATGGCACACTCAACGAGAGATCAATCATGATAGTGAAAAGCTCTGTCCAAGCTCTTCCTG
GTGTGGAAGACATAAAAGTTGATCCTGAGCTCCACAAGATCACCATCTCATACAAACCTG
ACCAGACAGGTCCTCGAGACCTCATTGAAGTCATTGAGTCAGCTGCCTCTGGTGATCTTA
CTGTATCGATATACCCAGAAGCAGATGGAAGGCAGCAGCATAGACATGGGGAGATCAAGC
GATACAGGCAGTCTTTCTTGTGGAGTTTAGTATTCACCATCCCGGTATTCCTCACCTCCA
TGGTGTTCATGTACATCCCAGGGCTGAAGGATGGGCTCGAAAAGAAGGTTATTAACATGA
TGAGCATTGGTGAGCTCTTGCGGTGGATTTTGTCAACGCCAGTTCAATTTGTAATTGGCC
GCAGATTTTATACTGGTGCTTATAAAGCGTTATCCCACGGCTCATCAAACATGGATGTAC
TCATTGCTCTTGGGACCAACACAGCTTACTTCTACTCAGTTTACTCCATCCTCCGAGCTG
CCTCCTCACATAATTACATGGCAACTGATTTTTTTGAAACTAGTTCAATGCTCATATCGT
TTATCCTTCTTGGAAAGTACCTTGAGATCTTGGCAAAAGGGAAGACCTCTGAGGCTATTG
CCAAGCTTATGGATCTTGCACCAGAAACTGCAACTATGTTGATATATGATCATGAAGGGA
ATGTTGTGGGCGAGAAGGAAATTGACAGTAGGTTGATTCAGAAAAATGATGTGATCAAAG
TAGTCCCAGGTGGGAAAGTTGCTTCTGATGGCTTTGTTATATGGGGACAGAGCCATGTGA
ATGAAAGCATGATCACCGGAGAATCACGACCTGTGGCAAAGAGGAAGGGTGACACTGTCA
TAGGAGGGACGGTGAATGAGAATGGTGTGCTTCATGTCCGTGCAACATTTGTTGGATCAG
AGAGTGCCCTTGCACAGATTGTACGGCTAGTAGAGTCAGCGCAAATGGCAAAAGCTCCTG
TACAAAAGTTTGCTGATCAGATATCTAGAGTCTTTGTTCCCCTGGTCATCATTCTTTCTT
TGCTTACTTGGCTTGCTTGGTTCTTAGCTGGGAGGCTTCATGGTTACCCTAACTCATGGA
TACCATCTTCCATGGATAGCTTTCAACTAGCTCTCCAATTCGGGATATCAGTTATGGTTA
TTGCATGCCCTTGCGCCTTAGGGCTTGCAACTCCAACAGCTGTGATGGTTGCTACTGGAG
TTGGTGCCTCACAAGGAGTTCTTATCAAGGGTGGGCAAGCTCTGGAGAGTGCACAGAAGG
TCGACTGCATCGTTTTCGACAAGACAGGGACACTAACCATTGGGAAGCCTGTTGTGGTCA
ACACAAGACTGTTAAAAAACATGGTCTTGCGTGAATTCTATGCTTACGTTGCAGCAGCAG
AGGTCAACAGTGAGCACCCACTGGGTAAGGCAGTCGTGGAGCATGCCAAGAAGTTCCATT
CGGAAGAGAGCCATGTCTGGACTGAAGCAAGGGATTTCATTTCAGTGACAGGGCACGGTG
TCAAGGCAAAAATAAGTGGCAGGGCTGTTATGGTGGGAAACAAGAGCTTTATGTTGACTT
CAGGCATTGATATCCCGGTGGAAGCTTTGGAAATCCTAACGGAAGAAGAGGAGAAGGCCC
AAACAGCGATCATTGTGGCTATGGATCAAGAAGTCGTGGGCATTATCTCTGTATCTGATC
CAATAAAACCAAATGCCCGCGAAGTGATTTCGTATCTCAAATCTATGAAGGTGGAGAGTA
TAATGGTGACTGGGGACAACTGGGGGACTGCCAATGCCATTAGCAAAGAGGTTGGCATTG
AGAACACAGTTGCAGAAGCGAAACCAGAGCAGAAAGCTGAGAAGGTGAAAGAACTTCAGT
CGGCCGGAAGGACCGTGGCAATGGTTGGTGATGGAATCAACGATTCTCCAGCGCTTGTAT
CAGCCGACGTTGGCCTGGCGATTGGCGCAGGCACTGACGTCGCCATTGAAGCGGCCGACA
TCGTCCTCATGAAGAGCAACCTGGAAGACGTGATCACCGCCATCGATCTGTCCAGAAAAA
CCTTCTTCCGCATACGGATGAACTACGTCTGGGCGCTCGGCTACAACATCATCGGCATAC
CGATCGCTGCCGGGGTGCTCTTCCCGTCGACCCGGTTCCGCTTGCCGCCATGGGTCGCCG
GCGCTGCGATGGCTGCTTCCTCCGTTAGCGTCGTCTGCTGGTCCCTGCTGTTGAGGTACT
ACAAGAGCCCAAAACTGGGCCGTTGATCATGCAGTACACACGCATAGCATTTGCTTAGAA
TAAGAGGTGTAGATATCTGTTGACAATGTGCTAATGTGGTTCTAAAAGAAATGTGCTAGT
GTGTGTTGTGTGGCACCTGAAATGTGTACATTACCTACGTATATATGCACCGTGTGTTTA
CAAGTGTTAAATATGGAGCACTTTGCCAACACTAGCAGGTGATAC

consensusID : consensus_8279#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 686
fasta sequence 
                              [AGGTGAGCCCGAGGACGAGCCAAGGGGGACTGCCAATCCCATTAGCAAAGAGGTTGGCATTGAGACCCCAGTGCAGAAGCGAAACCAGAGCAGAAAGCTGAGAAGGTGAAAGAACTTCAGTCGGCCGGAAGGACCGTGGCAATGGTTGGTGATGGAATCAACGATTCTCCAGCGCTTGTATCAGCCGACGTTGGCCTGGCGATTGGCGCAGGCACTGACGTCGCCATTGAAGCGGCCGACATCGTCCTCATGAAGAGCAACCTGGAAGACGTGATCACCGCCATCGATCTGTCCAGAAAAACCTTCTTCCGCATACGGATGAACTACGTCTGGGCGCTCGGCTACAACATTATTGGCATACCGATCGCTGCCGGGGTGCTCTTCCCGTCGACCCGGTTCCGCTTGCCGCCATGGGTTGCCGGCGCTGCGATGGCTGCTTCCTCCGTAAGCGTCGTCTGCTGGTCCCTGCTGTTGAGGTACTACAAGAGCCCAAAACTGGGCCGTTGATCATGCAGTACACACGCATAGCATTTGCTTAGAATAAGAGGTGTAGATATCTGTTGACAATGTGCTAATGTGGTTCTAAAAGAAATGTGCTAGTGTGTGTTGTGTGGCACCTGAAATGTGTACATTACCTACGTATATATGCCCCGTGTGTTTACAAGTGTTAAAAAAAAAAAAAAAAA]

[-] EMBL CA758978             [AGGTGAGCCCGAGGACGAGCCAAGGGGGACTGCCAATCCCATTAGCAAAGAGGTTGGCATTGAGACCCCAGTGCAGAAGCGAAACCAGAGCAGAAAGCTGAGAAGGTGAAAGAACTTCAGTCGGCCGGAAGGACCGTGGCAATGGTTGGTGATGGAATCAACGATTCTCCAGCGCTTGTATCAGCCGACGTTGGCCTGGCGATTGGCGCAGGCACTGACGTCGCCATTGAAGCGGCCGACATCGTCCTCATGAAGAGCAACCTGGAAGACGTGATCACCGCCATCGATCTGTCCAGAAAAACCTTCTTCCGCATACGGATGAACTACGTCTGGGCGCTCGGCTACAACATTATTGGCATACCGATCGCTGCCGGGGTGCTCTTCCCGTCGACCCGGTTCCGCTTGCCGCCATGGGTTGCCGGCGCTGCGATGGCTGCTTCCTCCGTAAGCGTCGTCTGCTGGTCCCTGCTGTTGAGGTACTACAAGAGCCCAAAACTGGGCCGTTGATCATGCAGTACACACGCATAGCATTTGCTTAGAATAAGAGGTGTAGATATCTGTTGACAATGTGCTAATGTGGTTCTAAAAGAAATGTGCTAGTGTGTGTTGTGTGGCACCTGAAATGTGTACATTACCTACGTATATATGCCCCGTGTGTTTACAAGTGTTAAAAAAAAAAAAAAAAA]




>consensus_8279#1
AGGTGAGCCCGAGGACGAGCCAAGGGGGACTGCCAATCCCATTAGCAAAGAGGTTGGCAT
TGAGACCCCAGTGCAGAAGCGAAACCAGAGCAGAAAGCTGAGAAGGTGAAAGAACTTCAG
TCGGCCGGAAGGACCGTGGCAATGGTTGGTGATGGAATCAACGATTCTCCAGCGCTTGTA
TCAGCCGACGTTGGCCTGGCGATTGGCGCAGGCACTGACGTCGCCATTGAAGCGGCCGAC
ATCGTCCTCATGAAGAGCAACCTGGAAGACGTGATCACCGCCATCGATCTGTCCAGAAAA
ACCTTCTTCCGCATACGGATGAACTACGTCTGGGCGCTCGGCTACAACATTATTGGCATA
CCGATCGCTGCCGGGGTGCTCTTCCCGTCGACCCGGTTCCGCTTGCCGCCATGGGTTGCC
GGCGCTGCGATGGCTGCTTCCTCCGTAAGCGTCGTCTGCTGGTCCCTGCTGTTGAGGTAC
TACAAGAGCCCAAAACTGGGCCGTTGATCATGCAGTACACACGCATAGCATTTGCTTAGA
ATAAGAGGTGTAGATATCTGTTGACAATGTGCTAATGTGGTTCTAAAAGAAATGTGCTAG
TGTGTGTTGTGTGGCACCTGAAATGTGTACATTACCTACGTATATATGCCCCGTGTGTTT
ACAAGTGTTAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8279#0      ACGCGAACACGCTGCCAATGGCGGCGAGCACTCGAGCCCTCTTCCTCTCCTGCTTCCACG 60
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      GAAGCGGCGGCGGCGGCGGCACTTCCGAGGTGAGCCGCCGCCTCGTGCTGCGGCCGCGGT 120
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      ACCCGTCCATGCCGCGGCGACCGAGGTCGGCCGCGGTCGCCGGAGAGGGAGGGGAAGGAG 180
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      GAGGAGGAGGAGGCGACGGCGATCTGGAGGCGGCGGCCGTGGGGGCGGAGGAGGAGGAGA 240
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      AGGTGGCGGTGTTCGAGGTGTCCGGGATGACGTGCGCCGCGTGCGCGGGCTCGGTGGAGA 300
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      AGGCCGTCAAGCGGCTCCAGGGCATCCACGACGCCGCCGTCGACGTCCTCGGGGGCCGCG 360
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      CGCAGGTCGTCTTCTACCCGGCGTTCGTCTCGGAGGAAAAAATTAGGGAAACCATCCAGG 420
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      ATGTGGGCTTTGAAGCTAAGCTGATTGATGAGGAAGTCAAGGAAAAAAACATTCTAGTAT 480
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      GCAGGCTGCACATAAAAGGAATGACCTGCACATCTTGTGCGAGCACAGTGGAATCCATCT 540
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      TGCAAGTTGTTCCTGGTGTTCAGAGAGCTTCTGTCGCATTGGCTACTGAAGAGGCAGAAA 600
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      TCCGTTATGACCGTAGAATCGTTACTGCCAGTCAACTAACCCATGCAGTTGAAGAGACGG 660
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      GTTTTGAAGCAATACTGATCACCACTGGAGATGATCAGAGCAGGATAGACCTCAAAGTGG 720
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      ATGGCACACTCAACGAGAGATCAATCATGATAGTGAAAAGCTCTGTCCAAGCTCTTCCTG 780
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      GTGTGGAAGACATAAAAGTTGATCCTGAGCTCCACAAGATCACCATCTCATACAAACCTG 840
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      ACCAGACAGGTCCTCGAGACCTCATTGAAGTCATTGAGTCAGCTGCCTCTGGTGATCTTA 900
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      CTGTATCGATATACCCAGAAGCAGATGGAAGGCAGCAGCATAGACATGGGGAGATCAAGC 960
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      GATACAGGCAGTCTTTCTTGTGGAGTTTAGTATTCACCATCCCGGTATTCCTCACCTCCA 1020
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      TGGTGTTCATGTACATCCCAGGGCTGAAGGATGGGCTCGAAAAGAAGGTTATTAACATGA 1080
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      TGAGCATTGGTGAGCTCTTGCGGTGGATTTTGTCAACGCCAGTTCAATTTGTAATTGGCC 1140
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      GCAGATTTTATACTGGTGCTTATAAAGCGTTATCCCACGGCTCATCAAACATGGATGTAC 1200
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      TCATTGCTCTTGGGACCAACACAGCTTACTTCTACTCAGTTTACTCCATCCTCCGAGCTG 1260
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      CCTCCTCACATAATTACATGGCAACTGATTTTTTTGAAACTAGTTCAATGCTCATATCGT 1320
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      TTATCCTTCTTGGAAAGTACCTTGAGATCTTGGCAAAAGGGAAGACCTCTGAGGCTATTG 1380
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      CCAAGCTTATGGATCTTGCACCAGAAACTGCAACTATGTTGATATATGATCATGAAGGGA 1440
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      ATGTTGTGGGCGAGAAGGAAATTGACAGTAGGTTGATTCAGAAAAATGATGTGATCAAAG 1500
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      TAGTCCCAGGTGGGAAAGTTGCTTCTGATGGCTTTGTTATATGGGGACAGAGCCATGTGA 1560
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      ATGAAAGCATGATCACCGGAGAATCACGACCTGTGGCAAAGAGGAAGGGTGACACTGTCA 1620
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      TAGGAGGGACGGTGAATGAGAATGGTGTGCTTCATGTCCGTGCAACATTTGTTGGATCAG 1680
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      AGAGTGCCCTTGCACAGATTGTACGGCTAGTAGAGTCAGCGCAAATGGCAAAAGCTCCTG 1740
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      TACAAAAGTTTGCTGATCAGATATCTAGAGTCTTTGTTCCCCTGGTCATCATTCTTTCTT 1800
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      TGCTTACTTGGCTTGCTTGGTTCTTAGCTGGGAGGCTTCATGGTTACCCTAACTCATGGA 1860
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      TACCATCTTCCATGGATAGCTTTCAACTAGCTCTCCAATTCGGGATATCAGTTATGGTTA 1920
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      TTGCATGCCCTTGCGCCTTAGGGCTTGCAACTCCAACAGCTGTGATGGTTGCTACTGGAG 1980
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      TTGGTGCCTCACAAGGAGTTCTTATCAAGGGTGGGCAAGCTCTGGAGAGTGCACAGAAGG 2040
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      TCGACTGCATCGTTTTCGACAAGACAGGGACACTAACCATTGGGAAGCCTGTTGTGGTCA 2100
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      ACACAAGACTGTTAAAAAACATGGTCTTGCGTGAATTCTATGCTTACGTTGCAGCAGCAG 2160
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      AGGTCAACAGTGAGCACCCACTGGGTAAGGCAGTCGTGGAGCATGCCAAGAAGTTCCATT 2220
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      CGGAAGAGAGCCATGTCTGGACTGAAGCAAGGGATTTCATTTCAGTGACAGGGCACGGTG 2280
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      TCAAGGCAAAAATAAGTGGCAGGGCTGTTATGGTGGGAAACAAGAGCTTTATGTTGACTT 2340
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      CAGGCATTGATATCCCGGTGGAAGCTTTGGAAATCCTAACGGAAGAAGAGGAGAAGGCCC 2400
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      AAACAGCGATCATTGTGGCTATGGATCAAGAAGTCGTGGGCATTATCTCTGTATCTGATC 2460
consensus_8279#1      ------------------------------------------------------------
                                                                                  

consensus_8279#0      CAATAAAACCAAATGCCCGCGAAGTGATTTCGTATCTCAAATCTATGAAGGTGGAGAGTA 2520
consensus_8279#1      ---------------------------------------------------AGGTGAGCC 9
                                                                          ** ***  

consensus_8279#0      TAATGGTGACTGGGGACAACTGGGGGACTGCCAATGCCATTAGCAAAGAGGTTGGCATTG 2580
consensus_8279#1      CGAGGACGA-----GCCAA--GGGGGACTGCCAATCCCATTAGCAAAGAGGTTGGCATTG 62
                        * *  **     * ***  ************** ************************

consensus_8279#0      AGAACACAGTTGCAGAAGCGAAACCAGAGCAGAAAGCTGAGAAGGTGAAAGAACTTCAGT 2640
consensus_8279#1      AGACCCCAGT-GCAGAAGCGAAACCAGAGCAGAAAGCTGAGAAGGTGAAAGAACTTCAGT 121
                      *** * **** *************************************************

consensus_8279#0      CGGCCGGAAGGACCGTGGCAATGGTTGGTGATGGAATCAACGATTCTCCAGCGCTTGTAT 2700
consensus_8279#1      CGGCCGGAAGGACCGTGGCAATGGTTGGTGATGGAATCAACGATTCTCCAGCGCTTGTAT 181
                      ************************************************************

consensus_8279#0      CAGCCGACGTTGGCCTGGCGATTGGCGCAGGCACTGACGTCGCCATTGAAGCGGCCGACA 2760
consensus_8279#1      CAGCCGACGTTGGCCTGGCGATTGGCGCAGGCACTGACGTCGCCATTGAAGCGGCCGACA 241
                      ************************************************************

consensus_8279#0      TCGTCCTCATGAAGAGCAACCTGGAAGACGTGATCACCGCCATCGATCTGTCCAGAAAAA 2820
consensus_8279#1      TCGTCCTCATGAAGAGCAACCTGGAAGACGTGATCACCGCCATCGATCTGTCCAGAAAAA 301
                      ************************************************************

consensus_8279#0      CCTTCTTCCGCATACGGATGAACTACGTCTGGGCGCTCGGCTACAACATCATCGGCATAC 2880
consensus_8279#1      CCTTCTTCCGCATACGGATGAACTACGTCTGGGCGCTCGGCTACAACATTATTGGCATAC 361
                      ************************************************* ** *******

consensus_8279#0      CGATCGCTGCCGGGGTGCTCTTCCCGTCGACCCGGTTCCGCTTGCCGCCATGGGTCGCCG 2940
consensus_8279#1      CGATCGCTGCCGGGGTGCTCTTCCCGTCGACCCGGTTCCGCTTGCCGCCATGGGTTGCCG 421
                      ******************************************************* ****

consensus_8279#0      GCGCTGCGATGGCTGCTTCCTCCGTTAGCGTCGTCTGCTGGTCCCTGCTGTTGAGGTACT 3000
consensus_8279#1      GCGCTGCGATGGCTGCTTCCTCCGTAAGCGTCGTCTGCTGGTCCCTGCTGTTGAGGTACT 481
                      ************************* **********************************

consensus_8279#0      ACAAGAGCCCAAAACTGGGCCGTTGATCATGCAGTACACACGCATAGCATTTGCTTAGAA 3060
consensus_8279#1      ACAAGAGCCCAAAACTGGGCCGTTGATCATGCAGTACACACGCATAGCATTTGCTTAGAA 541
                      ************************************************************

consensus_8279#0      TAAGAGGTGTAGATATCTGTTGACAATGTGCTAATGTGGTTCTAAAAGAAATGTGCTAGT 3120
consensus_8279#1      TAAGAGGTGTAGATATCTGTTGACAATGTGCTAATGTGGTTCTAAAAGAAATGTGCTAGT 601
                      ************************************************************

consensus_8279#0      GTGTGTTGTGTGGCACCTGAAATGTGTACATTACCTACGTATATATGCACCGTGTGTTTA 3180
consensus_8279#1      GTGTGTTGTGTGGCACCTGAAATGTGTACATTACCTACGTATATATGCCCCGTGTGTTTA 661
                      ************************************************ ***********

consensus_8279#0      CAAGTGTTAAATATGGAGCACTTTGCCAACACTAGCAGGTGATAC 3225
consensus_8279#1      CAAGTGTTAAAAAAAAAAAAAAAAA-------------------- 686
                      *********** *   *  *


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)