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Oryza sativa
cluster # 8280 cluster # 8280       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8280#0 length = 1597 sequences # 2  
consensus_8280#1 length = 1304 sequences # 1  
consensus_8280#2 length = 743 sequences # 2  

consensusID : consensus_8280#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1597
fasta sequence
                              [TNAAATTATTTTTTTTTTTTAAATTNTTTTTNTTTTTTNNNGAGGGCGANCAGCAANCATGATTGAGAATAGTAAAGGGATGACACGGCAAGAAATTAAGAAGTTGTGTGCTATACATCCTCTTATCGTGCCAAATTGAGACAACGGNGGAGCCAAGGAGGCTGCTTCAGCGCGTCCTGCTGCTCCAGGTCCAAATGCTGCTGCGTCGTCCCAACACCGGGGCCACCAGCAACAACCTTCACCGCCGACGACGACCCCAACCGAGATGGCCGGTGNGGCATCACCGCCCTGCAGTTGGTGCTGCCGGACTCCGTCGACGACGACGAGTTGCTCGTCCTCGAGTCCACGCTAGACGACGGNGCCTCCTTCTTGGTCGTCGTCGTCCTCCCGATCGCTAGCGTCAGGTCCANCTCGCTCTCTTCAAGAACACTAGTGTGAGCCTGTGGCTTGTCATTGTCGCTCCCAGGGAAGAGCCGGCGTCCATCAGTAGCTTCTGTACTCGGTACAGCCGGTGCAGCTCCTGAACCTGAACAAAGCTGCTGTTATTTGCTTGAGGCCTGAAGGTTCGGTACTGGATAAGGAAGCAAGAGTTTGGAAGTTTCAGTATGGAGTGGTGTTCTTATCTTACCTGCTGCTTGAATGTCTCCTCCTGCCTCAACATGGCCATCTTCATGTGTTCCTTCTCGTACTGCTTCAGGTACCTTGACATCTTCTTGTGGCCGGAGAATTAGACCTTTTTTGGCTGGCTTTGAAGCCAAATCACAGCTGCAAAATACAGTGCGAGATCAACAGATTGCTCTCTCTCTCTCTCTCTCTCTCGATGGATGCATACGCTCAATTTTTTTCTGCCATGGCAGTAACAAACCAACCATATAAAATTTTGCACCCTAGCTATCTTTATAGATGGATGCAAGGAAAATGGAAACTATGAGAAAGGAATTGAGTGGCTTTTACTCACAATAGGTGGAGGCCGACCAGTTCGAACGCTTATCGGGATCGAAGCCTCAAAGAACCTTGCAACAGGGGCACTTAACTTTCTCAACAATCCACAAGAGCCTATTTTAAAGGCGGAGAGAGAGCGAGAGAGAGATACTAGCAATGGGGATTACAGTGTGGATTGACTGAAATCTGAAGCATTTGAGAGTGAAAGGGACGATGCCCCCACCACAAAATGTCAAGCAGACTAGAAAAGCAGGGAGACATAGCAACCCCCACTTGCTATAAATATGTGTGCATCCATCTTGTGTTGTATCTATCCAGAAATAGATTTAAAGGAAGGCACTACACCAGAAAGGAAGAAAGAATCACCCGAACCAAGAGACAGGAACAGCTAAAGTAACCAAGGCACTTCACATGTGTGCATGCCTGCCTGCCCTGGAATCATGCTCCTCGCTCCTAACTTGTTGACATCACAGACCTCCCCTCCCCCACTCAGGAATATACTACAACAGTACGGACCCCCTTTTTTCTTTCTTTTATTTCTCAATCTAGTAGAATGACATGACTGATTAATAATTGCCACCCAAGATTGTTTATAACCATTGTGGATCTGGGGATCTTGTCGACTTCCATGAGTAAATGCAGTCGTCCTGGAGAG]

[-] EMBL AU097533             [TNAAATTATTTTTTTTTTTTAAATTNTTTTTNTTTTTTNNNGAGGGCGANCAGCAANCATGATTGAGAATAGTAAAGGGATGACACGGCAAGAAATTAAGAAGTTGTGTGCTATACATCCTCTTATCGTGCCAAATTGAGACAACGGNGGAGCCAAGGAGGCTGCTTCAGCGCGTCCTGCTGCTCCAGGTCCAAATGCTGCTGCGTCGTCCCAACACCGGGGCCACCAGCAACAACCTTCACCGCCGACGACGACCCCAACCGAGATGGCCGGTGNGGCATCACCGCCCTGCAGTTGGTGCTGCCGGACTCCGTCGACGACGACGAGTTGCTCGTCCTCGAGTCCACGCTAGACGACGGNGCCTCCTTCTTGGTCGTCGTCGTCCTCCCGATCGCTAGCGTCAGGTCCANCTCGCTCTCTTCAAGAACACTAGTGTGAGCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK064458             [                                                                                                                                        TGAGACAACGGTGGAGCCAAGGAGGCTGCTTCAGCGCGTCCTGCTGCTCCAGGTCCAAATGCTGCTGCGTCGTCCCAACACCGGGGCCACCAGCAACAACCTTCACCGCCGACGACGACCCCAACCGAGATGGCCGGTGCGGCATCACCGCCCTGCAGTTGGTGCTGCCGGACTCCGTCGACGACGACGAGTTGCTCGTCCTCGAGTCCACGCTAGACGACGGCGCCTCCTTCTTGGTCGTCGTCGTCCTCCCGATCGCTAGCGTCAGGTCCAGCTCGCTCTCTTCAAGAACACTAGTGTGAGCCTGTGGCTTGTCATTGTCGCTCCCAGGGAAGAGCCGGCGTCCATCAGTAGCTTCTGTACTCGGTACAGCCGGTGCAGCTCCTGAACCTGAACAAAGCTGCTGTTATTTGCTTGAGGCCTGAAGGTTCGGTACTGGATAAGGAAGCAAGAGTTTGGAAGTTTCAGTATGGAGTGGTGTTCTTATCTTACCTGCTGCTTGAATGTCTCCTCCTGCCTCAACATGGCCATCTTCATGTGTTCCTTCTCGTACTGCTTCAGGTACCTTGACATCTTCTTGTGGCCGGAGAATTAGACCTTTTTTGGCTGGCTTTGAAGCCAAATCACAGCTGCAAAATACAGTGCGAGATCAACAGATTGCTCTCTCTCTCTCTCTCTCTCTCGATGGATGCATACGCTCAATTTTTTTCTGCCATGGCAGTAACAAACCAACCATATAAAATTTTGCACCCTAGCTATCTTTATAGATGGATGCAAGGAAAATGGAAACTATGAGAAAGGAATTGAGTGGCTTTTACTCACAATAGGTGGAGGCCGACCAGTTCGAACGCTTATCGGGATCGAAGCCTCAAAGAACCTTGCAACAGGGGCACTTAACTTTCTCAACAATCCACAAGAGCCTATTTTAAAGGCGGAGAGAGAGCGAGAGAGAGATACTAGCAATGGGGATTACAGTGTGGATTGACTGAAATCTGAAGCATTTGAGAGTGAAAGGGACGATGCCCCCACCACAAAATGTCAAGCAGACTAGAAAAGCAGGGAGACATAGCAACCCCCACTTGCTATAAATATGTGTGCATCCATCTTGTGTTGTATCTATCCAGAAATAGATTTAAAGGAAGGCACTACACCAGAAAGGAAGAAAGAATCACCCGAACCAAGAGACAGGAACAGCTAAAGTAACCAAGGCACTTCACATGTGTGCATGCCTGCCTGCCCTGGAATCATGCTCCTCGCTCCTAACTTGTTGACATCACAGACCTCCCCTCCCCCACTCAGGAATATACTACAACAGTACGGACCCCCTTTTTTCTTTCTTTTATTTCTCAATCTAGTAGAATGACATGACTGATTAATAATTGCCACCCAAGATTGTTTATAACCATTGTGGATCTGGGGATCTTGTCGACTTCCATGAGTAAATGCAGTCGTCCTGGAGAG]


>consensus_8280#0 TNAAATTATTTTTTTTTTTTAAATTNTTTTTNTTTTTTNNNGAGGGCGANCAGCAANCAT GATTGAGAATAGTAAAGGGATGACACGGCAAGAAATTAAGAAGTTGTGTGCTATACATCC TCTTATCGTGCCAAATTGAGACAACGGNGGAGCCAAGGAGGCTGCTTCAGCGCGTCCTGC TGCTCCAGGTCCAAATGCTGCTGCGTCGTCCCAACACCGGGGCCACCAGCAACAACCTTC ACCGCCGACGACGACCCCAACCGAGATGGCCGGTGNGGCATCACCGCCCTGCAGTTGGTG CTGCCGGACTCCGTCGACGACGACGAGTTGCTCGTCCTCGAGTCCACGCTAGACGACGGN GCCTCCTTCTTGGTCGTCGTCGTCCTCCCGATCGCTAGCGTCAGGTCCANCTCGCTCTCT TCAAGAACACTAGTGTGAGCCTGTGGCTTGTCATTGTCGCTCCCAGGGAAGAGCCGGCGT CCATCAGTAGCTTCTGTACTCGGTACAGCCGGTGCAGCTCCTGAACCTGAACAAAGCTGC TGTTATTTGCTTGAGGCCTGAAGGTTCGGTACTGGATAAGGAAGCAAGAGTTTGGAAGTT TCAGTATGGAGTGGTGTTCTTATCTTACCTGCTGCTTGAATGTCTCCTCCTGCCTCAACA TGGCCATCTTCATGTGTTCCTTCTCGTACTGCTTCAGGTACCTTGACATCTTCTTGTGGC CGGAGAATTAGACCTTTTTTGGCTGGCTTTGAAGCCAAATCACAGCTGCAAAATACAGTG CGAGATCAACAGATTGCTCTCTCTCTCTCTCTCTCTCTCGATGGATGCATACGCTCAATT TTTTTCTGCCATGGCAGTAACAAACCAACCATATAAAATTTTGCACCCTAGCTATCTTTA TAGATGGATGCAAGGAAAATGGAAACTATGAGAAAGGAATTGAGTGGCTTTTACTCACAA TAGGTGGAGGCCGACCAGTTCGAACGCTTATCGGGATCGAAGCCTCAAAGAACCTTGCAA CAGGGGCACTTAACTTTCTCAACAATCCACAAGAGCCTATTTTAAAGGCGGAGAGAGAGC GAGAGAGAGATACTAGCAATGGGGATTACAGTGTGGATTGACTGAAATCTGAAGCATTTG AGAGTGAAAGGGACGATGCCCCCACCACAAAATGTCAAGCAGACTAGAAAAGCAGGGAGA CATAGCAACCCCCACTTGCTATAAATATGTGTGCATCCATCTTGTGTTGTATCTATCCAG AAATAGATTTAAAGGAAGGCACTACACCAGAAAGGAAGAAAGAATCACCCGAACCAAGAG ACAGGAACAGCTAAAGTAACCAAGGCACTTCACATGTGTGCATGCCTGCCTGCCCTGGAA TCATGCTCCTCGCTCCTAACTTGTTGACATCACAGACCTCCCCTCCCCCACTCAGGAATA TACTACAACAGTACGGACCCCCTTTTTTCTTTCTTTTATTTCTCAATCTAGTAGAATGAC ATGACTGATTAATAATTGCCACCCAAGATTGTTTATAACCATTGTGGATCTGGGGATCTT GTCGACTTCCATGAGTAAATGCAGTCGTCCTGGAGAG



consensusID : consensus_8280#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1304
fasta sequence
                              [TTTATATAAGGAAAACGATAAGGCTTGGAATCATCAAGCGGGTCGGCTCCGGGTGCACGACTCTTTTTTCTTTCCCCTGCTGAGCGCGACTTCTTAATCATGACGGTGGTGGGGAAGTAAAAAAAATAAGAAGTAAAAAAAAAAGTGAAGTAAAGTGAGGACAAACGATCGAGAAATGCGAGGGCGAGCAGCAAGCATGATTGAGAATAGTAAAGGGATGACACGGCAAGAAATTAAGAAGTTGTGTGCTATACATCCTCTTATCGTGCCAAATTGAGACAACGGTGGAGCCAAGGAGGCTGCTTCAGCGCGTCCTGCTGCTCCAGGTCCAAATGCTGCTGCGTCGTCCCAACACCGGGGCCACCAGCAACAACCTTCACCGCCGACGACGACCCCAACCGAGATGGCCGGTGCGGCATCACCGCCCTGCAGTTGGTGCTGCCGGACTCCGTCGACGACGACGAGTTGCTCGTCCTCGAGTCCACGCTAGACGACGGCGCCTCCTTCTTGGTCGTCGTCGTCCTCCCGATCGCTAGCGTCAGGTCCAGCTCGCTCTCTTCAAGAACACTAGTGTGAGCCTGTGGCTTGTCATTGTCGCTCCCAGGGAAGGTGTGCCATGGCCTGCTCGACCCTGCCTCGTTCTCCTCTGCATGATAATCGTCTTCAGGTATGCAACTGATGCCTTGCATTGTGATTGCAGAGCCGGCGTCCATCAGTAGCTTCTGTACTCGGTACAGCCGGTGCAGCTCCTGAACCTGCTGCTTGAATGTCTCCTCCTGCCTCAACATGGCCATCTTCATGTGTTCCTTCTCGTACTGCTTCAGGTACCTTGACATCTTCTTGTGGCCGGAGAATTAGACCTTTTTTGGCTGGCTTTGAAGCCAAATCACAGCTGCAAAATACAGTGCGAGATCAACAGATTGCTCTCTCTCTCTCTCTCTCTCTCGATGGATGCATACGCTCAATTTTTTTCTGCCATGGCAGTAACAAACCAACCATATAAAATTTTGCACCCTAGCTATCTTTATAGATGGATGCAAGGAAAATGGAAACTATGAGAAAGGAATTGAGTGGCTTTTACTCACAATAGGTGGAGGCCGACCAGTCCGAACGCTTATCGGGATCGAAGCCTCAAAGAACCTTGCAACAGGGGCACTTAACTTTCTCAACAATCCACAAGAGCCTATTTTAAAGGCGGAGAGAGAGCGAGAGAGAGATACTAGCAATGGGGATTACAGTGTGGATTGACTGAAATCTGAAGCATTTGAGAGTGAAAGGGATGATGCCCCCACCACAAAATGTCA]

[-] EMBL AK099556             [TTTATATAAGGAAAACGATAAGGCTTGGAATCATCAAGCGGGTCGGCTCCGGGTGCACGACTCTTTTTTCTTTCCCCTGCTGAGCGCGACTTCTTAATCATGACGGTGGTGGGGAAGTAAAAAAAATAAGAAGTAAAAAAAAAAGTGAAGTAAAGTGAGGACAAACGATCGAGAAATGCGAGGGCGAGCAGCAAGCATGATTGAGAATAGTAAAGGGATGACACGGCAAGAAATTAAGAAGTTGTGTGCTATACATCCTCTTATCGTGCCAAATTGAGACAACGGTGGAGCCAAGGAGGCTGCTTCAGCGCGTCCTGCTGCTCCAGGTCCAAATGCTGCTGCGTCGTCCCAACACCGGGGCCACCAGCAACAACCTTCACCGCCGACGACGACCCCAACCGAGATGGCCGGTGCGGCATCACCGCCCTGCAGTTGGTGCTGCCGGACTCCGTCGACGACGACGAGTTGCTCGTCCTCGAGTCCACGCTAGACGACGGCGCCTCCTTCTTGGTCGTCGTCGTCCTCCCGATCGCTAGCGTCAGGTCCAGCTCGCTCTCTTCAAGAACACTAGTGTGAGCCTGTGGCTTGTCATTGTCGCTCCCAGGGAAGGTGTGCCATGGCCTGCTCGACCCTGCCTCGTTCTCCTCTGCATGATAATCGTCTTCAGGTATGCAACTGATGCCTTGCATTGTGATTGCAGAGCCGGCGTCCATCAGTAGCTTCTGTACTCGGTACAGCCGGTGCAGCTCCTGAACCTGCTGCTTGAATGTCTCCTCCTGCCTCAACATGGCCATCTTCATGTGTTCCTTCTCGTACTGCTTCAGGTACCTTGACATCTTCTTGTGGCCGGAGAATTAGACCTTTTTTGGCTGGCTTTGAAGCCAAATCACAGCTGCAAAATACAGTGCGAGATCAACAGATTGCTCTCTCTCTCTCTCTCTCTCTCGATGGATGCATACGCTCAATTTTTTTCTGCCATGGCAGTAACAAACCAACCATATAAAATTTTGCACCCTAGCTATCTTTATAGATGGATGCAAGGAAAATGGAAACTATGAGAAAGGAATTGAGTGGCTTTTACTCACAATAGGTGGAGGCCGACCAGTCCGAACGCTTATCGGGATCGAAGCCTCAAAGAACCTTGCAACAGGGGCACTTAACTTTCTCAACAATCCACAAGAGCCTATTTTAAAGGCGGAGAGAGAGCGAGAGAGAGATACTAGCAATGGGGATTACAGTGTGGATTGACTGAAATCTGAAGCATTTGAGAGTGAAAGGGATGATGCCCCCACCACAAAATGTCA]


>consensus_8280#1 TTTATATAAGGAAAACGATAAGGCTTGGAATCATCAAGCGGGTCGGCTCCGGGTGCACGA CTCTTTTTTCTTTCCCCTGCTGAGCGCGACTTCTTAATCATGACGGTGGTGGGGAAGTAA AAAAAATAAGAAGTAAAAAAAAAAGTGAAGTAAAGTGAGGACAAACGATCGAGAAATGCG AGGGCGAGCAGCAAGCATGATTGAGAATAGTAAAGGGATGACACGGCAAGAAATTAAGAA GTTGTGTGCTATACATCCTCTTATCGTGCCAAATTGAGACAACGGTGGAGCCAAGGAGGC TGCTTCAGCGCGTCCTGCTGCTCCAGGTCCAAATGCTGCTGCGTCGTCCCAACACCGGGG CCACCAGCAACAACCTTCACCGCCGACGACGACCCCAACCGAGATGGCCGGTGCGGCATC ACCGCCCTGCAGTTGGTGCTGCCGGACTCCGTCGACGACGACGAGTTGCTCGTCCTCGAG TCCACGCTAGACGACGGCGCCTCCTTCTTGGTCGTCGTCGTCCTCCCGATCGCTAGCGTC AGGTCCAGCTCGCTCTCTTCAAGAACACTAGTGTGAGCCTGTGGCTTGTCATTGTCGCTC CCAGGGAAGGTGTGCCATGGCCTGCTCGACCCTGCCTCGTTCTCCTCTGCATGATAATCG TCTTCAGGTATGCAACTGATGCCTTGCATTGTGATTGCAGAGCCGGCGTCCATCAGTAGC TTCTGTACTCGGTACAGCCGGTGCAGCTCCTGAACCTGCTGCTTGAATGTCTCCTCCTGC CTCAACATGGCCATCTTCATGTGTTCCTTCTCGTACTGCTTCAGGTACCTTGACATCTTC TTGTGGCCGGAGAATTAGACCTTTTTTGGCTGGCTTTGAAGCCAAATCACAGCTGCAAAA TACAGTGCGAGATCAACAGATTGCTCTCTCTCTCTCTCTCTCTCTCGATGGATGCATACG CTCAATTTTTTTCTGCCATGGCAGTAACAAACCAACCATATAAAATTTTGCACCCTAGCT ATCTTTATAGATGGATGCAAGGAAAATGGAAACTATGAGAAAGGAATTGAGTGGCTTTTA CTCACAATAGGTGGAGGCCGACCAGTCCGAACGCTTATCGGGATCGAAGCCTCAAAGAAC CTTGCAACAGGGGCACTTAACTTTCTCAACAATCCACAAGAGCCTATTTTAAAGGCGGAG AGAGAGCGAGAGAGAGATACTAGCAATGGGGATTACAGTGTGGATTGACTGAAATCTGAA GCATTTGAGAGTGAAAGGGATGATGCCCCCACCACAAAATGTCA



consensusID : consensus_8280#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 743
fasta sequence
                              [CAAGAAGGCTGGTTAAGGAGCGTCCTGATGGTCCAGGTCCAAAATGCTGATGGGTGGTCCCAACACCGGGGCCCCCCAGCAAACAACGTTCACCGGCGGAAGACGACCCCAACCAAGATGGCCGGTGCGGCATCACCGCCTTGCAGTTGGTGCTGCCGGACTCCGTCGACGACGACAAGTTGCTCGTCCTCGAGTCCACGCTAGACGACGGCGCCTCCTTCTTGGTCGTCGTCGTCCTCCCGATCGCTAGCGTCAGGTCCAGCTCGCTCTCTTCAAGAACACTAGTGTGAGCCTGTGGCTTGTCATTGTCGCTCCCAGGGAAGGTGTGCCATGGCC-TGCTCGACCCTGCCTC-GTTCTCCTCTGCATGATAATCGTCTTCAGGTATGCAACTGATGCCTTGCATTGTGATTGCAGAGCCGG-CGTCCATCAGTAGCTTCTGTACTCGGTACAGCCGGTGCAGCTCCTGAATCTGCTGCTTGAATGTCTCCTCCTGCCTCAACATGGCCATCTTCATGTGTTCCTTCTCGTACTGCTTCAGGTACCTTGACATCTTCTTGTGGCCGGAGAATTAGACCTTTTTTGGCTGGCTTTGAAGCCAAATCACAGAATAGGTGGAGGCCGACCAGTTCGAACGCTTATCGGGATCGAAGCCTCAAAGAACCTTGCAACAGGGGCACTTAACTTTCTCAACAATCCACAAGAGCCTATTTTAAAGGCGGAGAGAGAGCGAGAGAGAGATACTA]

[-] EMBL BE041041             [CAAGAAGGCTGGTTAAGGAGCGTCCTGATGGTCCAGGTCCAAAATGCTGATGGGTGGTCCCAACACCGGGGCCCCCCAGCAAACAACGTTCACCGGCGGAAGACGACCCCAACCAAGATGGCCGGTGCGGCATCACCGCCTTGCAGTTGGTGCTGCCGGACTCCGTCGACGACGACAAGTTGCTCGTCCTCGAGTCCACGCTAGACGACGGCGCCTCCTTCTTGGTCGTCGTCGTCCTCCCGATCGCTAGCGTCAGGTCCAGCTCGCTCTCTTCAAGAACACTAGTGTGAGCCTGTGGCTTGTCATTGTCGCTCCCAGGGAAGGTGTGCCATGGCC TGCTCGACCCTGCCTC GTTCTCCTCTGCATGATAATCGTCTTCAGGTATGCAACTGATGCCTTGCATTGTGATTGCAGAGCCGG CGTCCATCAGTAGCTTCTGTACTCGGTACAGCCGGTGCAGCTCCTGAATCTGCTGCTTGAATGTCTCCTCCTGCCTCAACATGGCCATCTTCATGTGTTCCTTCTCGTACTGCTTCAGGTACCTTGACATCTTCTTGTGGCCGGAGAATTAGACCTTTTTTGGCTGGCTTTGAAGCCAAATCACAGAATAGGTGGAGGCCGACCAGTTCGAACGCTTATCGGGATCGAAGCCTCAAAGAAC                                                                                  ]
[-] EMBL AU066242             [                                                                                                                                                                                                                                                                                                                                      tnCCATGGCCTTGCTCGACCCTGCCTCGGTTCTCCTCTGCATGATAACCGTCNTCAGGTATGCAACTGATGCCTTGCATTGTGATTGNAGAGCCGGCCGTCCATCAGTAGCTTCTGTACTCGGTACAGCCGGTGCAGCTCCTGAACCTGCTGCTTGAATGTCTCCTCCTGCCTCAACATGGCCATCTTCATGTGTTCCTTCTCGTACTGCTTCAGGTACCTTGACATCTTCTTGTGGCCGGAGAATTAGACCTTTTTTGGCTGGCTTTGAAGCCAAATCACAGAATAGGTGGAGGCCGACCAGTTCGAACGCTTATCGGGATCGAAGCCTCAAAGAACCTTGCAACAGGGGCACTTAACTTTCTCAACAATCCACAAGAGCCTATTTTAAAGGCGGAGAGAGAGCGAGAGAGAGATACTA]


>consensus_8280#2 CAAGAAGGCTGGTTAAGGAGCGTCCTGATGGTCCAGGTCCAAAATGCTGATGGGTGGTCC CAACACCGGGGCCCCCCAGCAAACAACGTTCACCGGCGGAAGACGACCCCAACCAAGATG GCCGGTGCGGCATCACCGCCTTGCAGTTGGTGCTGCCGGACTCCGTCGACGACGACAAGT TGCTCGTCCTCGAGTCCACGCTAGACGACGGCGCCTCCTTCTTGGTCGTCGTCGTCCTCC CGATCGCTAGCGTCAGGTCCAGCTCGCTCTCTTCAAGAACACTAGTGTGAGCCTGTGGCT TGTCATTGTCGCTCCCAGGGAAGGTGTGCCATGGCCTGCTCGACCCTGCCTCGTTCTCCT CTGCATGATAATCGTCTTCAGGTATGCAACTGATGCCTTGCATTGTGATTGCAGAGCCGG CGTCCATCAGTAGCTTCTGTACTCGGTACAGCCGGTGCAGCTCCTGAATCTGCTGCTTGA ATGTCTCCTCCTGCCTCAACATGGCCATCTTCATGTGTTCCTTCTCGTACTGCTTCAGGT ACCTTGACATCTTCTTGTGGCCGGAGAATTAGACCTTTTTTGGCTGGCTTTGAAGCCAAA TCACAGAATAGGTGGAGGCCGACCAGTTCGAACGCTTATCGGGATCGAAGCCTCAAAGAA CCTTGCAACAGGGGCACTTAACTTTCTCAACAATCCACAAGAGCCTATTTTAAAGGCGGA GAGAGAGCGAGAGAGAGATACTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8280#1      TTTATATAAGGAAAACGATAAGGCTTGGAATCATCAAGCGGGTCGGCTCCGGGTGCACGA 60
consensus_8280#2      ------------------------------------------------------------
consensus_8280#0      ------------------------------------------------------------
                                                                                  

consensus_8280#1      CTCTTTTTTCTTTCCCCTGCTGAGCGCGACTTCTTAATCATGACGGTGGTGGGGAAGTAA 120
consensus_8280#2      ------------------------------------------------------------
consensus_8280#0      ------------------------------------------------------------
                                                                                  

consensus_8280#1      AAAAAATAAGAAGTAAAAAAAAAAGTGAAGTAAAGTGAGGACAAACGATCGAGAAATGCG 180
consensus_8280#2      ------------------------------------------------------------
consensus_8280#0      ------------------TNAAATTATTTTTTTTTTTTAAATTNTTTTTNTTTTTTNNNG 42
                                                                                  

consensus_8280#1      AGGGCGAGCAGCAAGCATGATTGAGAATAGTAAAGGGATGACACGGCAAGAAATTAAGAA 240
consensus_8280#2      ------------------------------------------------------------
consensus_8280#0      AGGGCGANCAGCAANCATGATTGAGAATAGTAAAGGGATGACACGGCAAGAAATTAAGAA 102
                                                                                  

consensus_8280#1      GTTGTGTGCTATACATCCTCTTATCGTGCCAAATTGAGACAACGGTGGAGCCAAGGAGGC 300
consensus_8280#2      ---------------------------------------------------CAAGAAGGC 9
consensus_8280#0      GTTGTGTGCTATACATCCTCTTATCGTGCCAAATTGAGACAACGGNGGAGCCAAGGAGGC 162
                                                                         **** ****

consensus_8280#1      TGCTTCAGC-GCGTCCTGCTGCTCCAGGTCCAAA-TGCTGCTGCGTCGTCCCAACACCGG 358
consensus_8280#2      TGGTTAAGGAGCGTCCTGATGGTCCAGGTCCAAAATGCTGATGGGTGGTCCCAACACCGG 69
consensus_8280#0      TGCTTCAGC-GCGTCCTGCTGCTCCAGGTCCAAA-TGCTGCTGCGTCGTCCCAACACCGG 220
                      ** ** **  ******** ** ************ ***** ** ** *************

consensus_8280#1      GGCCACC-AGCAA-CAACCTTCACCGCCG-ACGACGACCCCAACCGAGATGGCCGGTGCG 415
consensus_8280#2      GGCCCCCCAGCAAACAACGTTCACCGGCGGAAGACGACCCCAACCAAGATGGCCGGTGCG 129
consensus_8280#0      GGCCACC-AGCAA-CAACCTTCACCGCCG-ACGACGACCCCAACCGAGATGGCCGGTGNG 277
                      **** ** ***** **** ******* ** * ************* ************ *

consensus_8280#1      GCATCACCGCCCTGCAGTTGGTGCTGCCGGACTCCGTCGACGACGACGAGTTGCTCGTCC 475
consensus_8280#2      GCATCACCGCCTTGCAGTTGGTGCTGCCGGACTCCGTCGACGACGACAAGTTGCTCGTCC 189
consensus_8280#0      GCATCACCGCCCTGCAGTTGGTGCTGCCGGACTCCGTCGACGACGACGAGTTGCTCGTCC 337
                      *********** *********************************** ************

consensus_8280#1      TCGAGTCCACGCTAGACGACGGCGCCTCCTTCTTGGTCGTCGTCGTCCTCCCGATCGCTA 535
consensus_8280#2      TCGAGTCCACGCTAGACGACGGCGCCTCCTTCTTGGTCGTCGTCGTCCTCCCGATCGCTA 249
consensus_8280#0      TCGAGTCCACGCTAGACGACGGNGCCTCCTTCTTGGTCGTCGTCGTCCTCCCGATCGCTA 397
                      ********************** *************************************

consensus_8280#1      GCGTCAGGTCCAGCTCGCTCTCTTCAAGAACACTAGTGTGAGCCTGTGGCTTGTCATTGT 595
consensus_8280#2      GCGTCAGGTCCAGCTCGCTCTCTTCAAGAACACTAGTGTGAGCCTGTGGCTTGTCATTGT 309
consensus_8280#0      GCGTCAGGTCCANCTCGCTCTCTTCAAGAACACTAGTGTGAGCCTGTGGCTTGTCATTGT 457
                      ************ ***********************************************

consensus_8280#1      CGCTCCCAGGGAAGGTGTGCCATGGCCTGCTCGACCCTGC-CTCGTTCTCCTCTGCATGA 654
consensus_8280#2      CGCTCCCAGGGAAGGTGTGCCATGGCCTGCTCGACCCTGC-CTCGTTCTCCTCTGCATGA 368
consensus_8280#0      CGCTCCCAGGGAAGAGCCGGCGTCCATCAGTAGCTTCTGTACTCGGTACAGCCGGTGCAG 517
                      **************    * * *       * *   ***  **** *     * *     

consensus_8280#1      TAATCGT-CTTCAGGTATGCAACTGATGCCTTGCATTGTGATTGCAGAGCCGGCGTCCAT 713
consensus_8280#2      TAATCGT-CTTCAGGTATGCAACTGATGCCTTGCATTGTGATTGCAGAGCCGGCGTCCAT 427
consensus_8280#0      CTCCTGAACCTGAACAAAGCTGCTGTTAT-TTGCTTGAGGCCTGAAGGTTCGGTACTGGA 576
                           *  * * *   * **  *** *   **** *   *  ** **   ***       

consensus_8280#1      CAGT------AGCTTCTGTA---CTCGGTACAGC-CGGTGCAGCTCCTGAACCTGCTGCT 763
consensus_8280#2      CAGT------AGCTTCTGTA---CTCGGTACAGC-CGGTGCAGCTCCTGAATCTGCTGCT 477
consensus_8280#0      TAAGGAAGCAAGAGTTTGGAAGTTTCAGTATGGAGTGGTGTTCTTATCTTACCTGCTGCT 636
                       *        **  * ** *    ** ***  *   ****    *     * ********

consensus_8280#1      TGAATGTCTCCTCCTGCCTCAACATGGCCATCTTCATGTGTTCCTTCTCGTACTGCTTCA 823
consensus_8280#2      TGAATGTCTCCTCCTGCCTCAACATGGCCATCTTCATGTGTTCCTTCTCGTACTGCTTCA 537
consensus_8280#0      TGAATGTCTCCTCCTGCCTCAACATGGCCATCTTCATGTGTTCCTTCTCGTACTGCTTCA 696
                      ************************************************************

consensus_8280#1      GGTACCTTGACATCTTCTTGTGGCCGGAGAATTAGACCTTTTTTGGCTGGCTTTGAAGCC 883
consensus_8280#2      GGTACCTTGACATCTTCTTGTGGCCGGAGAATTAGACCTTTTTTGGCTGGCTTTGAAGCC 597
consensus_8280#0      GGTACCTTGACATCTTCTTGTGGCCGGAGAATTAGACCTTTTTTGGCTGGCTTTGAAGCC 756
                      ************************************************************

consensus_8280#1      AAATCACAGCTGCAAAATACAGTGCGAGATCAACAGATTGCTCTCTCTCTCTCTCTCTCT 943
consensus_8280#2      AAATCACAG--------------------------------------------------- 606
consensus_8280#0      AAATCACAGCTGCAAAATACAGTGCGAGATCAACAGATTGCTCTCTCTCTCTCTCTCTCT 816
                      *********                                                   

consensus_8280#1      CTCGATGGATGCATACGCTCAATTTTTTTCTGCCATGGCAGTAACAAACCAACCATATAA 1003
consensus_8280#2      ------------------------------------------------------------
consensus_8280#0      CTCGATGGATGCATACGCTCAATTTTTTTCTGCCATGGCAGTAACAAACCAACCATATAA 876
                                                                                  

consensus_8280#1      AATTTTGCACCCTAGCTATCTTTATAGATGGATGCAAGGAAAATGGAAACTATGAGAAAG 1063
consensus_8280#2      ------------------------------------------------------------
consensus_8280#0      AATTTTGCACCCTAGCTATCTTTATAGATGGATGCAAGGAAAATGGAAACTATGAGAAAG 936
                                                                                  

consensus_8280#1      GAATTGAGTGGCTTTTACTCACAATAGGTGGAGGCCGACCAGTCCGAACGCTTATCGGGA 1123
consensus_8280#2      ----------------------AATAGGTGGAGGCCGACCAGTTCGAACGCTTATCGGGA 644
consensus_8280#0      GAATTGAGTGGCTTTTACTCACAATAGGTGGAGGCCGACCAGTTCGAACGCTTATCGGGA 996
                                            ********************* ****************

consensus_8280#1      TCGAAGCCTCAAAGAACCTTGCAACAGGGGCACTTAACTTTCTCAACAATCCACAAGAGC 1183
consensus_8280#2      TCGAAGCCTCAAAGAACCTTGCAACAGGGGCACTTAACTTTCTCAACAATCCACAAGAGC 704
consensus_8280#0      TCGAAGCCTCAAAGAACCTTGCAACAGGGGCACTTAACTTTCTCAACAATCCACAAGAGC 1056
                      ************************************************************

consensus_8280#1      CTATTTTAAAGGCGGAGAGAGAGCGAGAGAGAGATACTAGCAATGGGGATTACAGTGTGG 1243
consensus_8280#2      CTATTTTAAAGGCGGAGAGAGAGCGAGAGAGAGATACTA--------------------- 743
consensus_8280#0      CTATTTTAAAGGCGGAGAGAGAGCGAGAGAGAGATACTAGCAATGGGGATTACAGTGTGG 1116
                      ***************************************                     

consensus_8280#1      ATTGACTGAAATCTGAAGCATTTGAGAGTGAAAGGGATGATGCCCCCACCACAAAATGTC 1303
consensus_8280#2      ------------------------------------------------------------
consensus_8280#0      ATTGACTGAAATCTGAAGCATTTGAGAGTGAAAGGGACGATGCCCCCACCACAAAATGTC 1176
                                                                                  

consensus_8280#1      A----------------------------------------------------------- 1304
consensus_8280#2      ------------------------------------------------------------
consensus_8280#0      AAGCAGACTAGAAAAGCAGGGAGACATAGCAACCCCCACTTGCTATAAATATGTGTGCAT 1236
                                                                                  

consensus_8280#1      ------------------------------------------------------------
consensus_8280#2      ------------------------------------------------------------
consensus_8280#0      CCATCTTGTGTTGTATCTATCCAGAAATAGATTTAAAGGAAGGCACTACACCAGAAAGGA 1296
                                                                                  

consensus_8280#1      ------------------------------------------------------------
consensus_8280#2      ------------------------------------------------------------
consensus_8280#0      AGAAAGAATCACCCGAACCAAGAGACAGGAACAGCTAAAGTAACCAAGGCACTTCACATG 1356
                                                                                  

consensus_8280#1      ------------------------------------------------------------
consensus_8280#2      ------------------------------------------------------------
consensus_8280#0      TGTGCATGCCTGCCTGCCCTGGAATCATGCTCCTCGCTCCTAACTTGTTGACATCACAGA 1416
                                                                                  

consensus_8280#1      ------------------------------------------------------------
consensus_8280#2      ------------------------------------------------------------
consensus_8280#0      CCTCCCCTCCCCCACTCAGGAATATACTACAACAGTACGGACCCCCTTTTTTCTTTCTTT 1476
                                                                                  

consensus_8280#1      ------------------------------------------------------------
consensus_8280#2      ------------------------------------------------------------
consensus_8280#0      TATTTCTCAATCTAGTAGAATGACATGACTGATTAATAATTGCCACCCAAGATTGTTTAT 1536
                                                                                  

consensus_8280#1      ------------------------------------------------------------
consensus_8280#2      ------------------------------------------------------------
consensus_8280#0      AACCATTGTGGATCTGGGGATCTTGTCGACTTCCATGAGTAAATGCAGTCGTCCTGGAGA 1596
                                                                                  

consensus_8280#1      -
consensus_8280#2      -
consensus_8280#0      G 1597
                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)