cluster # 8302

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Oryza sativa
cluster # 8302 cluster # 8302 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8302#0 length = 2013 sequences # 5
consensusID : consensus_8302#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2013
fasta sequence
                              [TCCCCCCTCCGGACTGCTGCTTACCGTGTGCTCTCCCCCATTCCCCCACTCCCCCCTTCCGCGAGCAGGTTCGAGGTTTCGGTGGCCGAAAATGGCGGAATCGCCGGCTGATCGGAGCCCAATCTGAGCCTGGACGCGCAGATACCGCGCCTTCCTGGCCCGATCTCTCGAAACCCCTTGAAAAATCCGAGCCGAAATGGCGGCCACCGCCCCGATCGGGCTTGCGAAGCGCGATTCGGTGGTGCTCTGGCCTGGGGGTCTCGCGAGCTGCACTTATTGTGACTGAAAGTGTGGTCGGCTCTTTGCTGGTTGGTGTGGGCTTGGGTCGCGGAGAGAGTAAAGGGTTTGTGGCATGATCAGCGCTAGCGCTGTGGCGATGCGTGGGGAGATGGGTGGCGGTGGCGGCGGCGGCGATGAGGGAGAGCTGGAGGACGAGCTTGATGCCCTCCTCGGAACCGGTGGCGCTGGCGCGCGTCGGCGAGGTGAGGACGCGGGAGAGAGGGAACGGGAGCTCAACATGTTCAGGAGCGGGTCGGCGCCGCCGACTATAGAGGGTTCGCTGAACGCCATCAGCGGGCTGCTCCGCGGCGGTGGAGAGGCAGCCGTTACCGTTGCAGCGATTCCCGACGCTGAGACGTTGAACGGGCATGGTGGTCTCCTCTCGGAGGATGAGCTCCGGGCTGACCCGGCCTATCTATCCTACTACTACTCGCATGGCAATCTGAACCCAAGGTTGCCACCGCCGGTGCTATCCAAGGAGGACTGGCGGTCCACACAGAGACTGAAGGCGGGGGTGGTTGGAGGAATTGGTGACGGAAGGAAGGTATCGCCGGAGGAGACTGGACATGAGCCGACGGTGGGGAGGCCTGTGTTCTCGCAGAATGTTGGTTTTGATCAGGAGGAGGCTGCAAGGAATGATGTAGGTGGTGCTGCAGAGTGGGTGGATGGTGGAGGTGATGGGCTGATTGGTTTGTCGCTTGGGCGGCAGCGCAGCTTTGCTGATATCCTTCAGGACAATATTGGCCGCAGAACTCCTGCTTCAGAGCATCCCTCTCGTGCAGTTAGTCGCAATTCTTTTCTTGACAATCAGGAACTACTAAATTCTGCTGATAGCCAGTACTCCATGCATAATGATATTCTGGAAGCACAACGTGCTGTCGGAAATGTGCAAAATGTCAGTGGCCTTCCCAGTATTAATGCATCCGCATCTCAAACTTTTGCATCTGTTCTGGGTTCATCTATTTCAAGGAATGCCACACCAGATTCTCATTATGTCCCTAGGGTCCCTAGTCCTGGCCTTCCACCTGTCGGTGTTAGGATTAATTCTAATGAGAAGAAGCTGAATTGCTCATCATCATTCAACACTGCATCTTCAAAAGCAGTTGAGCCTGATGATATTTTAGCTGCAATATCAAACATGAACATGTCAAAAGATGGTACTTTGGGTGACAGTAACAGCATTAGTCAATCAAAGTTCCAAAGTGAGATAAGTGACCACCAGAATATTTCTCTTGATCCAAAAGCTCTCCAAGTTAATAAGAATCAGCATTCGCTGATGTTGGAAGCTGATACTGATTATTTGGGTATACCACCAATTTCACAACCTTCAAATCCTTCCTTTTCTGATATTAACAAGAATGTCTCAGGTTTAGCGAACATAAGAAATTCTACTAACACACGTATAGATGGACACGCGGAGATGCAAAGGTCTTCTACTTTGTCTACTCGGTCATATCAGAAGTCCCCAACATCTTCCAATGCGAGCCCAGGTGGTTCTCCTGCTCAACACCAGAATATTGACAATATAAATTCAGCCTTTTTGAACTATGGACTCGGTGGGTATCCACTCAGCCCGGGTTTGCCTTCTATGATGATGAACTGTATGGGCTCTGGCAATATGCCTCCTTTGTTCGAAAGTGCAGCTGCTGCATCTGCTATAGCTTCATTCGGGGCAGATTCGAGAAACCTTGGTAACAATATTTTGTCGTCACCTACCTTAAGTCTATCTGATGT]

[+] EMBL AK099801             [TCCCCCCTCCGGACTGCTGCTTACCGTGTGCTCTCCCCCATTCCCCCACTCCCCCCTTCCGCGAGCAGGTTCGAGGTTTCGGTGGCCGAAAATGGCGGAATCGCCGGCTGATCGGAGCCCAATCTGAGCCTGGACGCGCAGATACCGCGCCTTCCTGGCCCGATCTCTCGAAACCCCTTGAAAAATCCGAGCCGAAATGGCGGCCACCGCCCCGATCGGGCTTGCGAAGCGCGATTCGGTGGTGCTCTGGCCTGGGGGTCTCGCGAGCTGCACTTATTGTGACTGAAAGTGTGGTCGGCTCTTTGCTGGTTGGTGTGGGCTTGGGTCGCGGAGAGAGTAAAGGGTTTGTGGCATGATCAGCGCTAGCGCTGTGGCGATGCGTGGGGAGATGGGTGGCGGTGGCGGCGGCGGCGATGAGGGAGAGCTGGAGGACGAGCTTGATGCCCTCCTCGGAACCGGTGGCGCTGGCGCGCGTCGGCGAGGTGAGGACGCGGGAGAGAGGGAACGGGAGCTCAACATGTTCAGGAGCGGGTCGGCGCCGCCGACTATAGAGGGTTCGCTGAACGCCATCAGCGGGCTGCTCCGCGGCGGTGGAGAGGCAGCCGTTACCGTTGCAGCGATTCCCGACGCTGAGACGTTGAACGGGCATGGTGGTCTCCTCTCGGAGGATGAGCTCCGGGCTGACCCGGCCTATCTATCCTACTACTACTCGCATGGCAATCTGAACCCAAGGTTGCCACCGCCGGTGCTATCCAAGGAGGACTGGCGGTCCACACAGAGACTGAAGGCGGGGGTGGTTGGAGGAATTGGTGACGGAAGGAAGGTATCGCCGGAGGAGACTGGACATGAGCCGACGGTGGGGAGGCCTGTGTTCTCGCAGAATGTTGGTTTTGATCAGGAGGAGGCTGCAAGGAATGATGTAGGTGGTGCTGCAGAGTGGGTGGATGGTGGAGGTGATGGGCTGATTGGTTTGTCGCTTGGGCGGCAGCGCAGCTTTGCTGATATCCTTCAGGACAATATTGGCCGCAGAACTCCTGCTTCAGAGCATCCCTCTCGTGCAGTTAGTCGCAATTCTTTTCTTGACAATCAGGAACTACTAAATTCTGCTGATAGCCAGTACTCCATGCATAATGATATTCTGGAAGCACAACGTGCTGTCGGAAATGTGCAAAATGTCAGTGGCCTTCCCAGTATTAATGCATCCGCATCTCAAACTTTTGCATCTGTTCTGGGTTCATCTATTTCAAGGAATGCCACACCAGATTCTCATTATGTCCCTAGGGTCCCTAGTCCTGGCCTTCCACCTGTCGGTGTTAGGATTAATTCTAATGAGAAGAAGCTGAATTGCTCATCATCATTCAACACTGCATCTTCAAAAGCAGTTGAGCCTGATGATATTTTAGCTGCAATATCAAACATGAACATGTCAAAAGATGGTACTTTGGGTGACAGTAACAGCATTAGTCAATCAAAGTTCCAAAGTGAGATAAGTGACCACCAGAATATTTCTCTTGATCCAAAAGCTCTCCAAGTTAATAAGAATCAGCATTCGCTGATGTTGGAAGCTGATACTGATTATTTGGGTATACCACCAATTTCACAACCTTCAAATCCTTCCTTTTCTGATATTAACAAGAATGTCTCAGGTTTAGCGAACATAAGAAATTCTACTAACACACGTATAGATGGACACGCGGAGATGCAAAGGTCTTCTACTTTGTCTACTCGGTCATATCAGAAGTCCCCAACATCTTCCAATGCGAGCCCAGGTGGTTCTCCTGCTCAACACCAGAATATTGACAATATAAATTCAGCCTTTTTGAACTATGGACTCGGTGGGTATCCACTCAGCCCGGGTTTGCCTTCTATGATGATGAACTGTATGGGCTCTGGCAATATGCCTCCTTTGTTCGAAAGTGCAGCTGCTGCATCTGCTATAGCTTCATTCGGGGCAGATTCGAGAAACCTTGGTAACAATATTTTGTCGTCACCTACCTTAAGTCTATCTGATGT]
[+] EMBL AK102882             [    CCCTCCGGACTGCTGCTTACCGTGTGCTCTCCCCCATTCCCCCACTCCCCCCTTCCGCGAGCAGGTTCGAGGTTTCGGTGGCCGAAATTGGCGGAATCGCCGGCTGATCGGAGCCCAATCTGAGCCTGGACGCGCAGATACCGCGCCTTCCTGGCCCGATCTCTCGAAACCCCTTGAAAAATCCGAGCCGAAATGGCGGCCACCGCCCCGATCGGGCTTGCGAAGCGCGATTCGGTGGTGCTCTGGCCTGGGGGTCTCGCGAGCTGCACTTATTGTGACTGAAAGTGTGGTCGGCTCTTTGCTGGTTGGTGTGGGCTTGGGTCGCGGAGAGAGTAAAGGGTTTGTGGCATGATCAGCGCTAGCGCTGTGGCGATGCGTGGGGAGATGGGTGGCGGTGGCGGCGGCGGCGATGAGGGAGAGCTGGAGGACGAGCTTGATGCCCTCCTCGGAACCGGTGGCGCTGGCGCGCGTCGGCGAGGTGAGGACGCGGGAGAGAGGGAACGGGAGCTCAACATGTTCAGGAGCGGGTCGGCGCCGCCGACTATAGAGGGTTCGCTGAACGCCATCAGCGGGCTGCTCCGCGGCGGTGGAGAGGCAGCCGTTACCGTTGCAGCGATTCCCGACGCTGAGACGTTGAACGGGCATGGTGGTCTCCTCTCGGAGGATGAGCTCCGGGCTGACCCGGCCTATCTATCCTACTACTACTCGCATGGCAATCTGAACCCAAGGTTGCCACCGCCGGTGCTATCCAAGGAGGACTGGCGGTCCACACAGAGACTGAAGGCGGGGGTGGTTGGAGGAATTGGTGACGGAAGGAAGGTATCGCCGGAGGAGACTGGACATGAGCCGACGGTGGGGAGGCCTGTGTTCTCGCAGAATGTTGGTTTTGATCAGGAGGAGGCTGCAAGGAATGATGTAGGTGGTGCTGCAGAGTGGGTGGATGGTGGAGGTGATGGGCTGATTGGTTTGTCGCTTGGGCGGCAGCGCAGCTTTGCTGATATCCTTCAGGACAATATTGGCCGCAGAACTCCTGCTTCAGAGCATCCCTCTCGTGCAGTTAGTCGCAATTCTTTTCTTGACAATCAGGAACTACTAAATTCTGCTGATAGCCAGTACTCCATGCATAATGATATTCTGGAAGCACAACGTGCTGTCGGAAATGTGCAAAATGTCAGTGGCCTTCCCAGTATTAATGCATCCGCATCTCAAACTTTTGCATCTGTTCTGGGTTCATCTATTTCAAGGAATGCCACACCAGATTCTCATTATGTCCCTAGGGTCCCTAGTCCTGGCCTTCCACCTGTCGGTGTTAGGATTAATTCTAATGAGAAGAAGCTGAATTGCTCATCATCATTCAACACTGCATCTTCAAAAGCAGTTGAGCCTGATGATATTTTAGCTGCAATATCAAACATGAACATGTCAAAAGATGGTACTTTGGGTGACAGTAACAGCATTAGTCAATCAAAGTTCCAAAGTGAGATAAGTGACCACCAGAATATTTCTCTTGATCCAAAAGCTCTCCAAGTTAATAAGAATCAGCATTCGCTGATGTTGGAAGCTGATACTGATTATTTGGGTATACCACCAATTTCACAACCTTCAAATCCTTCCTTTTCTGATATTAACAAGAATGTCTCAGGTTTAGCGAACATAAGAAATTCTACTAACACACGTATAGATGGACACGCGGAGATGCAAAGGTCTTCTACTTTGTCTACTCGGTCATATCAGAAGTCCCCAACATCTTCCAATGCGAGCCCAGGTGGTTCTCCTGCTCAACACCAGAATATTGACAATATAAATTCAGCCTTTTTGAACTATGGACTCGGTGGGTATCCACTCAGCCCGGGTTTGCCTTCTATGATGATGAACTGTATGGGCTCTGGCAATATGCCTCCTTTGTTCGAAAGTGCAGCTGCTGCATCTGCTATAGCTTCATTCGGGGCAGATTCGAGAAACCTTGGTAACAATATTTTGTCGTCACCTACCTTAAGTCTATCTGATGT]
[+] EMBL CB632687             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAGGCCTGTGTTCTCGCAGAATGTTGGTTTTGATCAGGAGGAGGCTGCAAGGAATGATGTAGGTGGTGCTGCAGAGTGGGTGGATGGTGGAGGTGATGGGCTGATTGGTTTGTCGCTTGGGCGGCAGCGCAGCTTTGCTGATATCCTTCAGGACAATATTGGCCGCAGAACTCCTGCTTCAGAGCATCCCTCTCGTGCAGTTAGTCGCAATTCTTTTCTTGACAATCAGGAACTACTAAATTCTGCTGATAGCCAGTACTCCATGCATAATGATATTCTAGAAGCACAACGTGCTGTCGGAAATGTGCAAAATGTCAGTGGCCTTCCCAGTATTAATGCATCCACATCTCAAACTTTTGCATCTGTTCTGGGTTCATCTATTTCAAGGAATGCCACACCAGATTCTCATTATGTCCCTAGGGTCCCTAGTCCTGGCCTTCCACCTGTCGGTGTTAGGATTAATTCTAATGAGAAGAAGCTGAATTGCTCATCATCATTCAACACTGCATCTTCAAAAGCAGTTGAGCCTGATGATATTTTAGCTGCAATATCAAACATGAACATGTCAAAAGATGGTACTTTGGGTGACAGTAACAGCATTAGTCAATCAAAGTTCCAAAGTGAGATAAGTGACCACCAGAATATTTCTCTTGATCCAAAAGCTCTCCAAGTTAATAAGAATCAGCATTCGCTGATGTTGGAAGCTGATACTGATTATTTGGGTATACCACCAATTTCAC ACCTTCAAATCCTTCCTTTT                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB627970             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGTACCCTATGCATAATGATATTCTAGAAGCACAACGTGCTGTCGGAAATGTGCAAAATGTCAGTGGCCTTCCCAGTATTAATGCATCCACATCTCAAACTTTTGCATCTGTTCTGGGTTCATCTATTTCAAGGAATGCCACACCAGATTCTCATTATGTCCCTAGGGTCCCTAGTCCTGGCCTTCCACCTGTCGGTGTTAGGATTAATTCTAATGAGAAGAAGCTGAATTGCTCATCATCATTCAACACTGCATCTTCAAAAGCAGTTGAGCCTGATGATATTTTAGCTGCAATATCAAACATGAACATGTCAAAAGATGGTACTTTGGGTGACAGTAACAGCATTAGTCAATCAAAGTTCCAAAGTGAGATAAGTGACCACCAGAATATTTCTCTTGATCCAAAAGCTCTCCAAGTTAATAAGAATCAGCATTCGCTGATGTTGGAAGCTGATACTGATTATTTGGGTATACCACCAATTTCACAACCTTCAAATCCTTCCTTTTCTGATATTAACAAGAATGTCTCAGGTTTAGCGAACATAAGAAATTCTACTAACACACGTATAGATGGACACGCGGAGATGCAAAGGTCTTCTACTTTGTCTACTCGGTCATATCAGAAGTCCCCAACATCTTCCAATGTGAGCCCAGGTGGTTCTCCTGCTCAACACCAGAATATTGACAATATAAATTCAGCCTTTTTGAACTATGGACTCGGTGGGTATCCACTCAGCCCGGGCTTGCCTTCTATGATGATGAACTGTATGGGCTCTGGCAATATGCCTCCTTTGNTCGAAAGTGCAGCTGC                                                                                       ]
[+] EMBL CF304079             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATCATCATTCAACACTGCATCTTCAAAAGCAGTTGAGCCTGATGATATTTTAGCTGCAATATCAAACATGAACATGTCAAAAGATGGTACTTTGGGTGACAGTAACAGCATTAGTCAATCAAAGTTCCAAAGTGAGATAAGTGACCACCAGAATATTTCTCTTGATCCAAAAGCTCTCCAAGTTAATAAGAATCAGCATTCGCTGATGTTGGAAGCTGATACTGATTATTTGGGTATACCACCAATTTCACAACCTTCAAATCCTTCCTTTTCTGATATTAACAAGAATGTCTCAGGTTTAGCGAACATAAGAAATTCTACTAACACACGTATAGATGGACACGCGGAGATGCAAAGGTCTTCTACTTTGTCTACTCGGTCATATCAGAAGTCCCCAACATCTTCCAATGCGAGCCCAGGTGGTTCTCCTGCTCAACACCAGAATATTGACAATATAAATTCAGCCTTTTTGAACTATGGACTCGGTGGGTATCCACTCAGCCCCGGTTTGCCTTCTATGATGATGAACTGTATGGGCTCTGGCAATATGCCTCCTTTGTTCGAAAGTGCAGCTGCTGCATCTGCTATAGCTT                                                                      ]




>consensus_8302#0
TCCCCCCTCCGGACTGCTGCTTACCGTGTGCTCTCCCCCATTCCCCCACTCCCCCCTTCC
GCGAGCAGGTTCGAGGTTTCGGTGGCCGAAAATGGCGGAATCGCCGGCTGATCGGAGCCC
AATCTGAGCCTGGACGCGCAGATACCGCGCCTTCCTGGCCCGATCTCTCGAAACCCCTTG
AAAAATCCGAGCCGAAATGGCGGCCACCGCCCCGATCGGGCTTGCGAAGCGCGATTCGGT
GGTGCTCTGGCCTGGGGGTCTCGCGAGCTGCACTTATTGTGACTGAAAGTGTGGTCGGCT
CTTTGCTGGTTGGTGTGGGCTTGGGTCGCGGAGAGAGTAAAGGGTTTGTGGCATGATCAG
CGCTAGCGCTGTGGCGATGCGTGGGGAGATGGGTGGCGGTGGCGGCGGCGGCGATGAGGG
AGAGCTGGAGGACGAGCTTGATGCCCTCCTCGGAACCGGTGGCGCTGGCGCGCGTCGGCG
AGGTGAGGACGCGGGAGAGAGGGAACGGGAGCTCAACATGTTCAGGAGCGGGTCGGCGCC
GCCGACTATAGAGGGTTCGCTGAACGCCATCAGCGGGCTGCTCCGCGGCGGTGGAGAGGC
AGCCGTTACCGTTGCAGCGATTCCCGACGCTGAGACGTTGAACGGGCATGGTGGTCTCCT
CTCGGAGGATGAGCTCCGGGCTGACCCGGCCTATCTATCCTACTACTACTCGCATGGCAA
TCTGAACCCAAGGTTGCCACCGCCGGTGCTATCCAAGGAGGACTGGCGGTCCACACAGAG
ACTGAAGGCGGGGGTGGTTGGAGGAATTGGTGACGGAAGGAAGGTATCGCCGGAGGAGAC
TGGACATGAGCCGACGGTGGGGAGGCCTGTGTTCTCGCAGAATGTTGGTTTTGATCAGGA
GGAGGCTGCAAGGAATGATGTAGGTGGTGCTGCAGAGTGGGTGGATGGTGGAGGTGATGG
GCTGATTGGTTTGTCGCTTGGGCGGCAGCGCAGCTTTGCTGATATCCTTCAGGACAATAT
TGGCCGCAGAACTCCTGCTTCAGAGCATCCCTCTCGTGCAGTTAGTCGCAATTCTTTTCT
TGACAATCAGGAACTACTAAATTCTGCTGATAGCCAGTACTCCATGCATAATGATATTCT
GGAAGCACAACGTGCTGTCGGAAATGTGCAAAATGTCAGTGGCCTTCCCAGTATTAATGC
ATCCGCATCTCAAACTTTTGCATCTGTTCTGGGTTCATCTATTTCAAGGAATGCCACACC
AGATTCTCATTATGTCCCTAGGGTCCCTAGTCCTGGCCTTCCACCTGTCGGTGTTAGGAT
TAATTCTAATGAGAAGAAGCTGAATTGCTCATCATCATTCAACACTGCATCTTCAAAAGC
AGTTGAGCCTGATGATATTTTAGCTGCAATATCAAACATGAACATGTCAAAAGATGGTAC
TTTGGGTGACAGTAACAGCATTAGTCAATCAAAGTTCCAAAGTGAGATAAGTGACCACCA
GAATATTTCTCTTGATCCAAAAGCTCTCCAAGTTAATAAGAATCAGCATTCGCTGATGTT
GGAAGCTGATACTGATTATTTGGGTATACCACCAATTTCACAACCTTCAAATCCTTCCTT
TTCTGATATTAACAAGAATGTCTCAGGTTTAGCGAACATAAGAAATTCTACTAACACACG
TATAGATGGACACGCGGAGATGCAAAGGTCTTCTACTTTGTCTACTCGGTCATATCAGAA
GTCCCCAACATCTTCCAATGCGAGCCCAGGTGGTTCTCCTGCTCAACACCAGAATATTGA
CAATATAAATTCAGCCTTTTTGAACTATGGACTCGGTGGGTATCCACTCAGCCCGGGTTT
GCCTTCTATGATGATGAACTGTATGGGCTCTGGCAATATGCCTCCTTTGTTCGAAAGTGC
AGCTGCTGCATCTGCTATAGCTTCATTCGGGGCAGATTCGAGAAACCTTGGTAACAATAT
TTTGTCGTCACCTACCTTAAGTCTATCTGATGT
clustalw multiple alignements is not computed in this case