These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8306#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3124 fasta sequence [AGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCGACTCTTTTGCCCCCCTCCCCTCCCCTCCCCTCCGGATCCATCCACGAAAATCTCCTCCCCCTCCGATTCCACCGCGCCGCACCGATGGCACGAACCCCACGCAAGCGCCGCCGCCGCCGCGGCGGAGGGGGCCACGACTACCTCTCCGGCCTCCCCGACGACGTCATCCTCGCCATCCTCTCCCGCCTCACGACCCGCCAGGCCGTCACGCTCTCCGCCCTCTCCCGCCGCTTCCGCGTCCTCCCGTCCCAGTTCGGCCGCGTCGACTCCGCGCTCGTCGCCGACCCGGCCCTGCCGCTCCCGTCGCTCCCCGCGCGGCCGTCCTTCATCCGCCGCCTCTCCTTCGCCCCCCAGACCCGCCGGTTCTCCTCCTCCGCGTTCGGCCGCCTCCTCGACGCCGCCGCCGACCGCGGCCTCTCCGAGCTCGCCGTCCGCCTGCCCCGCAGCGCGTTCCTTCCCCAGAACCTCCTCTCCATCCGCTCCCTCACCGTGGTCTCCCTCGACTCCTGCGCGCTCCCGCGATGGTGCCCCGCCGCGTGCCCTGGCCTCCGCACGCTCAAGCTCCACCACGTTGCCATCCCGCAGCGGATGATCAGCGTCATCCTCAAGGCCGCGCCCGTGCTCGAGACGCTGGAGATGGTGTACTGCATGGGATTCGCCGGCAGCTGCAGTATGGAGTCCTCCACGGTGAGGAACCTCCTGTTTAAGTCGGCTCTGGAGCAGCGTGAGGTCACGGTGAAAATGGCGGGTCTGAGGACGATCACGCTGTACACGCGCCCCAAGGTGCAGTCGGTTCGGCTGGATCCTGCACCGGAAATCAGGAAGGCATACCTGCACATCGCCAGGCCGCGCGTCAAACTGCAGTTCAGGATACGGCCGTTCTTGGATGCTGGCACGGGGTTGACCTGCCTCACGCTCAGGGGCATGGCCATCAAGTTGTTGTCATCTGAATATAAAGACACTCCAAACTTGGCTGTACAATTTGAAGACTTGAGAATACTGTCAGTGAGCTTGGATTTCTCAAATGAAAGAGAACTCATCTTCCTTCTGAAGCTGCTTGAGAGTTGCCCCAACCTGCAACAGTTGACTCTTTCGGCTGTTGATGCAAAAGACGACACTGCATTGCCAAATTTTGCTGATCATGAGGAGAGGCTTTCAAAGTTATCATGCCTAACTAAGAGTTTGGAGCAGCTCAAGTTTCTTGGATTCAGGCCTCAACGGTACCAGAAGGAACTCTTTATCTTTCTGCTAACTCAAGCAACGAACCTGAAGAAGATGGCGGTGGAGTTCCCGAAAGACCAAGAAGCTGCTGTGAGGAGAATTTTGTCAGTGAGGAAAGCCCCCACTCAGAAGAAAACTACCAAGTACAAACAATACTACTTGGAGTTAGAGTATCCTGTGGAGCCCAACTGCTCATAGGGCTCTCAAGTCGCTACATGACTGGTCTCTCTTGGACATACATTCACTCCCTAGACTTTAACCCTTAGGTTGCAATTCTCTTTACAGAGATCACACGCCGGAAAAGTTCTTATTCATTGGCTTCAGGATGTAACAAAACATTTGAGATGCTTTATTGCTTCGTGC-GTTATGTAATTTTCAATTTTTTGTGTTACAATGTTATACAGGGAAGTATGAGAATACATGGGGTTACGAGTACTTAAAACATGCTTGTGAGGATGATGAACATCTATTTCTGCTGCCAATTACTCTGAAGTTCTGCCATAGACTGTGTGCTCAAATTTGCCACTCCATCTGTTGGAATCGTCAGATGGGACTTGGAGCTCCTTTTCTGAACTGAATGGTTCGAAAAGACGGTCGATGTCCTCGTTCTTGACCTCCTCAAGGGTAGCAGGACTCCACTTAGGGGCATTGTCTTTGTCGATGCTGAGAGCTCTAATTCCCTCATAGACATCGCCAGTAACTACAGATCGGAGAGTGTTCATTGTAAGTCGGAATTCCTTCTTCAAACATTCCGGCAGGCTCTGCTTCCGACCTTCTCTGATCGATCGAAGAGTCATCTTCAGTGAAGTAGGAGATGATCTTCGCATGCCCTTCAGTACTGTAGCGATCCATTGGTTTCCATCAATGCTCCCTTCTGATTCAAAAGCTTTTATGATGTCCTCGATAGTCTCAGCAGAGAAACATTTGTTGATAGTTGGGAGCTTGTTTAAAATACTATCTTCATCAGGTTGAACATCAGTTGAGAACTCTTCAATAGCAGCTCGAACAGCAGACTCATCTCCTGTGTTTAAATTCAGCAGGCATTTTTCAAGTTCTTCCAATTTTTCAGAAGGAACAAAATGAGTAGCAAGACCGGCAGCAATCATTTCCTTTGCATTCAACCTTGCACCGGTCAAAGCCAGGTACTCCCCTAAATATCCAGGGAGTCTAGAATGGATATAAGAAAAGCTGCAGTCTGTGTGTAATCCAACACTAGCCTCAGGGGTTGCGAAGACTGTTTTCTCTGTGACAACTGCAAACTTCAGTGGAGCAACCATGGCTGCACCACCACCCATGACAAGTCCATTAACAAGAGCCACCGCGGTTTTCTTATACGTGTGGATATGGTAGCAAAGCCAATACATCCTGTAAACAACCTCGAGACAGGAGTCATCTGATTTTCCTTCATAGAACATCTTTAGATCCCCACCAGCGGAAAATGCACGTCCAGCCCCCTTGAAGATGACCAGCTTGGCATCCTCATCTTTCTCCCAGCTCTCCAAGAACTGGGCGAGGAGATACACCACTCTATCGGAGATGACGTTCAGCTGGCGCGGCCGGTTGAGGATCGCCACCCTCGCGCCGCCGGTCTCCTGCCCGAGCACCACCTCGTCGGGATTCGCCTGCTGCTGCTGCTGCTCCGGCTCCGCCATCAGGGAGGGACCCGAATTCCGCGGGAAGGGAGCTCAGCTCGAGTTAGGTGCTCCAAGAGAACGAGTTGGGCGAAGCAGGCGTGGAGGGAAGTTTGGTGAGGGGGAGCCGGTGGAGGGGATGGTGTAGTAGTAGTGGTGGAGCGGTAGGCG] [+] EMBL AK063352 [AGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCGACTCTTTTGCCCCCCTCCCCTCCCCTCCCCTCCGGATCCATCCACGAAAATCTCCTCCCCCTCCGATTCCACCGCGCCGCACCGATGGCACGAACCCCACGCAAGCGCCGCCGCCGCCGCGGCGGAGGGGGCCACGACTACCTCTCCGGCCTCCCCGACGACGTCATCCTCGCCATCCTCTCCCGCCTCACGACCCGCCAGGCCGTCACGCTCTCCGCCCTCTCCCGCCGCTTCCGCGTCCTCCCGTCCCAGTTCGGCCGCGTCGACTCCGCGCTCGTCGCCGACCCGGCCCTGCCGCTCCCGTCGCTCCCCGCGCGGCCGTCCTTCATCCGCCGCCTCTCCTTCGCCCCCCAGACCCGCCGGTTCTCCTCCTCCGCGTTCGGCCGCCTCCTCGACGCCGCCGCCGACCGCGGCCTCTCCGAGCTCGCCGTCCGCCTGCCCCGCAGCGCGTTCCTTCCCCAGAACCTCCTCTCCATCCGCTCCCTCACCGTGGTCTCCCTCGACTCCTGCGCGCTCCCGCGATGGTGCCCCGCCGCGTGCCCTGGCCTCCGCACGCTCAAGCTCCACCACGTTGCCATCCCGCAGCGGATGATCAGCGTCATCCTCAAGGCCGCGCCCGTGCTCGAGACGCTGGAGATGGTGTACTGCATGGGATTCGCCGGCAGCTGCAGTATGGAGTCCTCCACGGTGAGGAACCTCCTGTTTAAGTCGGCTCTGGAGCAGCGTGAGGTCACGGTGAAAATGGCGGGTCTGAGGACGATCACGCTGTACACGCGCCCCAAGGTGCAGTCGGTTCGGCTGGATCCTGCACCGGAAATCAGGAAGGCATACCTGCACATCGCCAGGCCGCGCGTCAAACTGCAGTTCAGGATACGGCCGTTCTTGGATGCTGGCACGGGGTTGACCTGCCTCACGCTCAGGGGCATGGCCATCAAGTTGTTGTCATCTGAATATAAAGACACTCCAAACTTGGCTGTACAATTTGAAGACTTGAGAATACTGTCAGTGAGCTTGGATTTCTCAAATGAAAGAGAACTCATCTTCCTTCTGAAGCTGCTTGAGAGTTGCCCCAACCTGCAACAGTTGACTCTTTCGGCTGTTGATGCAAAAGACGACACTGCATTGCCAAATTTTGCTGATCATGAGGAGAGGCTTTCAAAGTTATCATGCCTAACTAAGAGTTTGGAGCAGCTCAAGTTTCTTGGATTCAGGCCTCAACGGTACCAGAAGGAACTCTTTATCTTTCTGCTAACTCAAGCAACGAACCTGAAGAAGATGGCGGTGGAGTTCCCGAAAGACCAAGAAGCTGCTGTGAGGAGAATTTTGTCAGTGAGGAAAGCCCCCACTCAGAAGAAAACTACCAAGTACAAACAATACTACTTGGAGTTAGAGTATCCTGTGGAGCCCAACTGCTCATAGGGCTCTCAAGTCGCTACATGACTGGTCTCTCTTGGACATACATTCACTCCCTAGACTTTAACCCTTAGGTTGCAATTCTCTTTACAGAGATCACACGCCGGAAAAGTTCTTATTCATTGGCTTCAGGATGTAACAAAACATTTGAGATGCTTTATTGCTTCGTGC GTTATGTAATTTTCAATTTTTTGTGTTACAATGTTATACAGGGAA ] [+] EMBL CB644374 [ ACTACCTCTCCGGCCTCCCCGACGACGTCATCCTCGCCATCCTCTCCCGCCTCACGACCCGCCAGGCCGTCACGCTCTCCGCCCTCTCCCGCCGCTTCCGCGTCCTCCCGTCCCAGTTCGGCCGCGTCGACTCCGCGCTCGTCGCCGACCCGGCCCTGCCGCTCCCGTCGCTCCCCGCGCGGCCGTCCTTCATCCGCCGCCTCTCCTTCGCCCCCCAGACCCGCCGGTTCTCCTCCTCCGCGTTCGGCCGCCTCCTCGACGCCGCCGCCGACCGCGGCCTCTCCGAGCTCGCCGTCCGCCTGCCCCGCAGCGCGTTCCTTCCCCAGAACCTCCTCTCCATCCGCTCCCTCACCGTGGTCTCCCTCGACTCCTGCGCGCTCCCGCGATGGTGCCCCGCCGCGTGCCCTGGCCTCCGCACGCTCAAGCTCCACCACGTTGCCATCCCGCAGCGGATGATCAGCGTCATCCTCAAGGCCGCGCCCGTGCTCGAGACGCTGGAGATGGTGTACTGCATGGGATTCGCCGGCAGCTGCAGTATGGAGTCCTCCACGGTGAGGAACCTCCTGTTTAAGTCGGCTCTGGAGCAGCGTGAGGTCACGGTGAAAATGGCGGGTCTGAGGACGATCACGCTGTACACGCGCCCCAAGGTGCAGTCGGTTCGGCTGGATCCTGCACCGGAAATCAGGAAGGCATACCTGCACATCGCCAGGCCGCGCGTCAAACTGCAGTTCAAGATACGGCCGTTCTTGGATGCTGGCACGGGGTTGACCTGCCTCACGCTCAGGGGCATGGCCATCAAGTT ] [-] EMBL CB644375 [ ATACCTGCACATCGCCAGGCCGCGCGTCAAACTGCAGTTCAGGATACGGCCGTTCTTGGATGCTGGCACGGGGTTGACCTGCCTCACGCTCAGGGGCATGGCCATCAAGTTGTTGTCATCTGAATATAAAGACACTCCAAACTTGGCTGTACAATTTGAAGACTTGAGAATACTGTCAGTGAGCTTGGATTTCTCAAATGAAAGAGAACTCATCTTCCTTCTGAAGCTGCTTGAGAGTTGCCCCAACCTGCAACAGTTGACTCTTTCGGCTGTTGATGCAAAAGACGACACTGCATTGCCAAATTTTGCTGATCATGAGGAGAGGCTTTCAAAGTTATCATGCCTAACTAAGAGTTTGGAGCAGCTCAAGTTTCTTGGATTCAGGCCTCAACGGTACCAGAAGGAACTCTTTATCTTTCTGCTAACTCAAGCAACGAACCTGAAGAAGATGGCGGTGGAGTTCCCGAAAGACCAAGAAGCTGCTGTGAGGAGAATTTTGTCAGTGAGGAAAGCCCCCACTCAGAAGAAAACTACCAAGTACAAACAATACTACTTGGAGTTAGAGTATCCTGTGGAGCCCAACTGCTCATAGGGCTCTCAAGTCGCTACATGACTGGTCTCTCTTGGACATACATTCACTCCCTAGACTTTAACCCTTAGGTTGCAATTCTCTTTACAGAGATCACACGCCGGAAAAGTTCTTATTCATTGGCTTCAGGATGTAACAAAACATTTGAGATGCTTTATTGCTTCGTGC GTTATGTAATTTTCAATTTTTTGTGTTACAATGTTATACAGGGAAGTATGAGAATACATGGGGTTA ] [-] EMBL AU173532 [ ttttttTAACAAAACATTTGAGATGCTTTATTGCTTCGTGCAGTTATGTAATTTTCAATTTTTTGTGTTACAATGTTATACAGGGAAGTATGAGAATACATGGGGTTACGAGTACTTAAAACATGCTTGTGAGGATGATGAACATCTATTTCTGCTGCCAATTACTCTGAAGTTCTGCCATAGACTGTGTGCTCAAATTTGCCACTCCATCTGTTGGAATCGTCAGATGGGACTTGGAGCTCCTTTTCTGAACTGAATGGTTCGAAAAGACGGTCGATGTCCTCGTTCTTGACCTCCTCAAGGGTAGCAGGACTCCACTTAGGGGCATTGTCTTTGTCGATGCTGAGAGCTCTAATTCCCTCATAGACATCGCCAGTAACTACAGATCGGAGAGTGTTCATTGTAAGTCGGAATTCCTTCTTCAAACATT ] [-] EMBL AK069590 [ TTGAGATGCTTTATTGCTTCGTGC GTTATGTAATTTTCAATTTTTTGTGTTACAATGTTATACAGGGAAGTATGAGAATACATGGGGTTACGAGTACTTAAAACATGCTTGTGAGGATGATGAACATCTATTTCTGCTGCCAATTACTCTGAAGTTCTGCCATAGACTGTGTGCTCAAATTTGCCACTCCATCTGTTGGAATCGTCAGATGGGACTTGGAGCTCCTTTTCTGAACTGAATGGTTCGAAAAGACGGTCGATGTCCTCGTTCTTGACCTCCTCAAGGGTAGCAGGACTCCACTTAGGGGCATTGTCTTTGTCGATGCTGAGAGCTCTAATTCCCTCATAGACATCGCCAGTAACTACAGATCGGAGAGTGTTCATTGTAAGTCGGAATTCCTTCTTCAAACATTCCGGCAGGCTCTGCTTCCGACCTTCTCTGATCGATCGAAGAGTCATCTTCAGTGAAGTAGGAGATGATCTTCGCATGCCCTTCAGTACTGTAGCGATCCATTGGTTTCCATCAATGCTCCCTTCTGATTCAAAAGCTTTTATGATGTCCTCGATAGTCTCAGCAGAGAAACATTTGTTGATAGTTGGGAGCTTGTTTAAAATACTATCTTCATCAGGTTGAACATCAGTTGAGAACTCTTCAATAGCAGCTCGAACAGCAGACTCATCTCCTGTGTTTAAATTCAGCAGGCATTTTTCAAGTTCTTCCAATTTTTCAGAAGGAACAAAATGAGTAGCAAGACCGGCAGCAATCATTTCCTTTGCATTCAACCTTGCACCGGTCAAAGCCAGGTACTCCCCTAAATATCCAGGGAGTCTAGAATGGATATAAGAAAAGCTGCAGTCTGTGTGTAATCCAACACTAGCCTCAGGGGTTGCGAAGACTGTTTTCTCTGTGACAACTGCAAACTTCAGTGGAGCAACCATGGCTGCACCACCACCCATGACAAGTCCATTAACAAGAGCCACCGCGGTTTTCTTATACGTGTGGATATGGTAGCAAAGCCAATACATCCTGTAAACAACCTCGAGACAGGAGTCATCTGATTTTCCTTCATAGAACATCTTTAGATCCCCACCAGCGGAAAATGCACGTCCAGCCCCCTTGAAGATGACCAGCTTGGCATCCTCATCTTTCTCCCAGCTCTCCAAGAACTGGGCGAGGAGATACACCACTCTATCGGAGATGACGTTCAGCTGGCGCGGCCGGTTGAGGATCGCCACCCTCGCGCCGCCGGTCTCCTGCCCGAGCACCACCTCGTCGGGATTCGCCTGCTGCTGCTGCTGCTCCGGCTCCGCCATCAGGGAGGGACCCGAATTCCGCGGGAAGGGAGCTCAGCTCGAGTTAGGTGCTCCAAGAGAACGAGTTGGGCGAAGCAGGCGTGGAGGGAAGTTTGGTGAGGGGGAGCCGGTGGAGGGGATGGTGTAGTAGTAGTGGTGGAGCGGTAGGCG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||