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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8313#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 834 fasta sequence
[TCTTCTCCTCCTGCTTCCCCGTCTCACCTCCTCCTCGTCGGCCGCCGCCTCCGCCGCATCCGCCTCCGCCTCCGCCTTATTGCTCACTTCGCTCCGGCGACGGAAAGGCCGGCCGGCAGCTTGGTTGCGACAATCGAATTGAGTGCAAGAGAATACAAAAAATTCGCGTCTCGTCCCGGCCTTAGTGAAGAGGGCATGAGGTTCCTGGGCTGGTACCTCAAGATCG-CGGCCGGCGGCGCGGCCATAGGCGCTGCCATGGAGCTGTTCATGATCCACACCGGCTTCTATGAGAAGGTGACTGTGTTGGAGTCAGAGAAAAGAGCTTGGGAAACCAGCCCAGAGGCTCAAGCCATGAGAGAAGCCCTGAATCCATGGAGGAAGCATGATGACCAAGAGAAAAGATAGCCCTAGACTCATTGCCACCCTTCAATTGTAAGCCCTTCATGAGGTAATTT-GTTGGATGTACTAGTACTCCCTCCGTTTCATGTTAGCATTGCCTACATTCATATATATGTTAATGAATATAGACATATATGTGCGCTTAGATTTATTAACATCTATATGAATGTGGGCAATGCTAGAAAGTCCTGTAACCTGAAACGGAGGTAGTAGCATTTTTGCAGTATTTGTACCTCTCTCGAACTTCTGGATGGTAGGTGGTAGCTTCTACAAATACTTTAGAAGAATACACCCGTATGTCTTGATATATATTTTTTTTGGTTCAACACACATACACAGATGGCATGCCATCTTTATGTGATGCACTGATGTTTCATACTAGATAACAAGGAAATTATAGGCTTGGAGAGGTTGAACAGTTCTATTTTAAAAAAA]
[+] EMBL CF281975 [TCTTCTCCTCCTGCTTCCCCGTCTCACCTCCTCCTCGTCGGCCGCCGCCTCCGCCGCATCCGCCTCCGCCTCCGCCTTATTGCTCACTTCGCTCCGGCGACGGAAAGGCCGGCCGGCAGCTTGGTTGCGACAATCGAATTGAGTGCAAGAGAATACAAAAAATTCGCGTCTCGTCCCGGCCTTAGTGAAGAGGGCATGAGGTTCCTGGGCTGGTGCCTCAAGACNGNCGGCCGGCAGCGCGGCCATAGGCGCTGCCTGGGAGCTGTTCATGATCCACACCGGCTTCTATGAGAAGGTGACTGTGTTGGAGTCAGAGAAAAGAGCTTGGGAAACCAGCCCAGAGGCTCAAGCCATGAGAGAAGCCCTGAATCCATGGAGGAAGCATGATGACCAAGAGAAAAGATAGCCCTAGACTCATTGCCACCCTTCAATTGTAAGCCCTTCATGAGGTAATTTNGTTGGATGTACTAGTACTCCCTCCGTTTCATGTTAGCATTGCCTACATTCATATATATGTTAATGAATATAGACATATATGTGCGCTTAGATTTATTAACATCTATATG ]
[+] EMBL CF333455 [ GTCTCACCTCCTCCCCGTCGGCCGCCGCCTCCGCCGCATCCGCCTCCGCCTCCGCCTTATTGCTCACTTCGCTCCGGCGACGGAGAGGCCGGCCGGCAGCTTGGTTGCGACAATCGAATTGAGTGCAAGAGAATACAAAAAATTCGCGTCTCGTCCCGGCCTTAGTGAAGAGGGCATGAGGTTCCTGGGCTGGTACCTCAAGATCG CGGCCGGCGGCGCGGCCATAGGCGCTGCCATGGAGCTGTTCATGATCCACACCGGCTTCTATGAGAAGGTGACTGTGTTGGAGTCAGAGAAAAGAGCTTGGGAAACCAGCCCAGAGGCTCAAGCCATGAGAGAAGCCCTGAATCCATGGAGGAAGCATGATGACCAAGAGAAAAGATAGCCCTAGACTCATTGCCACCCTTCAATTGTAAGCCCTTCATGAGGTAATTT GTTGGATGTACTAGTACTTCCTCCGTTTCATGTTAGCATTGCCTACATTCATATATATGTTAATGAATATAGACATATATGTGTGCTTAGATTTATTAACATCTATATGAATGTGGGCAATGCTAGAAAGTCCTGTAACCTGAAACGGAGGTAGTAGCATTTTTGCAGTATTTGTACCTCTCTCGA ]
[+] EMBL AU166875 [ TCCTCCTCGTCGGCCGCCGCCTCCGCCGCATCCGCCTCCGCCTCCGCCTTATTGCTCACTTCGCTCCGGCGACGGAAAGGCCGGCCGGCAGCTTGGTTGCGACAATCGAATTGAGTGCAAGAGAATACAAAAAATTCGCGTCTCGTCCCGGCCTTAGTGAAGAGGGCATGAGGTTCCTGGGCTGGTACCTCAAGATCG CGGCCGGCGGCGCGGCCATAGGCGCTGCCATGGAGCTGTTCATGATCCACACCGGCTTCTATGAGAAGGTGACTGTGTTGGAGTCAGAGAAAAGAGCTTGGGAAACCAGCCCAGAGGCTCAAGCCATGAGAGAAGCCCTGAATCCATGGAGGAAGCATGATGACCAAGAGAAAAGATAGCCCTAGACTCATTGCCACCCTTCAATTGTAAGCCCTTCATGAGGTAA ]
[-] EMBL CF333456 [ AGAGCTTGGGAAACCAGCCCAGAGGCTCAAGCCATGAGAGAAGCCCTGAATCCATGGAGGAAGCATGATGACCAAGAGAAAAGATAGCCCTAGACTCATTGCCACCCTTCAATTGTAAGCCCTTCATGAGGTAATTT GTTGGATGTACTAGTACTTCCTCCGTTTCATGTTAGCATTGCCTACATTCATATATATGTTAATGAATATAGACATATATGTGTGCTTAGATTTATTAACATCTATATGAATGTGGGCAATGCTAGAAAGTCCTGTAACCTGAAACGGAGGTAGTAGCATTTTTGCAGTATTTGTACCTCTCTCGAACTTCTGGATGGTAGGTGGTAGCTTCTACAAATACTTTAGAAGAATACACCCGTATGTCTTGATATATATTTTTTTTGGTTCAACACACATACACAGATGGCATGCCATCTTTATGTGATGCACTGATGTTTCATACTAGATAACAAGGAAATTATAGGCTTGGAGAGGTTGAACAGTTCTATTTTAAAAAAA]
[-] EMBL CF281976 [ GCCCAGAGGCTCAAGCCATGAGAGAAGCCCTGAATCCATGGAGGAAGCATGATGACCAAGAGAAAAGATAGCCCTAGACTCATTGCCACCCTTCAATTGTAAGCCCTTCATGAGGTAATTT GTTGGATGTACTAGTACTCCCTCCGTTTCATGTTAGCATTGCCTACATTCATATATATGTTAATGAATATAGACATATATGTGCGCTTAGATTTATTAACATCTATATGAATGTGGGCAATGCTAGAAAGTCCTGTAACCTGAAACGGAGGTAGTAGCATTTTTGCAGTATTTGTACCTCTCTCGAACTTCTGGATGGTAGGTGGTAGCTTCTACAAATACTTTAGAAGAATACACCCGTATGTCTTGATATATATTTTTTTTGGTTCAACACACATACACAGATGGCATGCCATCTTTATGTGATGCACTGATGTTTCATACTAGATAACAAGGAAATTATAGGCTTGGAGAGGTTGAACAGTTCTA AAAAAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||