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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8316#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1571 fasta sequence
[GAAAACCACAAGAGACCNTAAAAAACTTCCTCTGATAGAGAGGAGACAGAGAGAGAGGAGGAGCTTTATTTCGAATGCTCCTGACTCCTCCTCGGNTCCTCTTCCTCTCGAGCCCTTCACTGCNGTAGCATCATTCAAGCTGGACCC------TCCCAGATCAAATCAAACCCGNTGGGNTGGCCTTCCGTTTTGAGGGATTCTATATCTATAGGCTTGTCCATGGCATCAGTTACTTATCTTGATGATGCCCATTCTGAAGTTATCGATCCTCCAAAGAACGAGGAGATGCTGGATGTTACTGAACTTGTTGATGATCACACCCAGCATTCACCAAAACCGAATGCGATGGTCTCTGGCAATGTGCGTGAGCTACTGGAATGCCCTGTGTGTCTAAATGCCATGTATCCTCCAATTCATCAGTGCTCCAATGGNCATACTCTATGTTCCGGATGCAAGCCCAGGGGTCACAACCGGTGCCCAACTTGCAGACATGAATTGGGTAACATAAGATGCCTTGCTCTGGGAAAAGNAGCTGCATCACTAGAGCTTNCATGCAAATATCAAAACTTTTGGGNGCTTGGGCATATATCTTTATTACTGNAAGCTGAAGCATGAGTCACAGNGGCCATACAGGCCCTATACTTGNCCATATGCTGGATCTGAATGCACTGGTGCTGGGGACATTTAAGATCTAANAAGGCACTTGNAANATGATCATAAGGGNGACATGCNCAACGGAAGNNCCTT-AATAACCGTTATGTCAAATCAAATCCTCATGAAGTTGAGAATGCTACCTGGATGCTCACGGTTTTCAGCTGTTTCGGCCAGTACTTTTGCCTGCACTTTGAGGCATTCCAGTTGGGCATGGCACCTGTCTACATCGCCTTCCTACGGTTCATGGGAGATGATGCAGAAGCCAAGAACTATAGCTACAGCCTGGAGGTCGGAGGCAGTGGTCGGAAGATGACCTGGCAAGGCGTCCCCCGAAGCATCAGAGACAGTCACAGGAAAGTTCGGGACAGCTACGACGGCCTTATCATCCAGCGGAACATGGCCTTGTTCTTCTCCGGTGGCGACAAGAAGGAGCTCAAACTGCGTGTCACCGGAAGGATTTGGAAGGAGCAGTGAATCACAACATCTCTAACTTCTCGTTGCGACTGTTAGTTTGATTGCGACATGGATCTTGATTCTTGAATTTCCAGGGTGAAATGGGATTAATGCGTAAGCGAATTGCTCCGGGAACTAGCTAGGCAGGACCCTGTAAGATTGTAGACTGTCTTAGCTACCAGCTGCCATTCTTCTTCTAGTGGTTCAGGAACATTTTGTATGGATGATTGTCTCGTGGCACTGATGTAGTAGAATTGAAGGCAAATCTCTTCTTTGCTCTTAACTTCTCCAAGAATTAGCCAATCTGGCGAATCTTCTGATGGTGACTCTGCCAAATGTAAATGATGTAGCTCTCCCCTTTGTATGATTCAAATCTATGTCAGGCCACCATTGTTTTGCCGGAAATGTACCCCTGCCAAACCTGCATTTGCTCCTACTACTACATGTTCAGCTGTAAATTTGAACAC]
[+] EMBL CA765332 [GAAAACCACAAGAGACCNTAAAAAACTTCCTCTGATAGAGAGGAGACAGAGAGAGAGGAGGAGCTTTATTTCGAATGCTCCTGACTCCTCCTCGGNTCCTCTTCCTCTCGAGCCCTTCACTGCNGTAGCATCATTCAAGCTGGACCC TCCCAGATCAAATCAAACCCGNTGGGNTGGCCTTCCGTTTTGAGGGATTCTATATCTATAGGCTTGTCCATGGCATCAGTTACTTATCTTGATGATGCCCATTCTGAAGTTATCGATCCTCCAAAGAACGAGGAGATGCTGGATGTTACTGAACTTGTTGATGATCACACCCAGCATTCACCAAAACCGAATGCGATGGTCTCTGGCAATGTGCGTGAGCTACTGGAATGCCCTGTGTGTCTAAATGCCATGTATCCTCCAATTCATCAGTGCTCCAATGGNCATACTCTATGTTCCGGATGCAAGCCCAGGGGTCACAACCGGTGCCCAACTTGCAGACATGAATTGGGTAACATAAGATGCCTTGCTCTGGGAAAAGNAGCTGCATCACTAGAGCTTNCATGCAAATATCAAAACTTTTGGGNGCTTGGGCATATATCTTTATTACTGNAAGCTGAAGCATGAGTCACAGNGGCCATACAGGCCCTATACTTGNCCATATGCTGGATCTGAATGCACTGGTGCTGGGGACATTTAAGATCTAANAAGGCACTTGNAANATGATCATAAGGGNGACATGCNCAACGGAAGNNCCTT AATAA ]
[+] EMBL AK107155 [ TGCTCCTGACTCCTCCTCGGTTCCTCTTCCTCTCGAGCCCTTCACTGCAGTAGCATCATTCAAGCTGGACCCAAAGCATCCCAGATCAAATCAAACCCGCTGGTTTGGCCTTCCGTTTTGAGGGATTCTATATCTATAGGCTTGTCCATGGCATCAGTTACTTATCTTGATGATGCCCATTCTGAAGTTATCGATCCTCCAAAGAACGAGGAGATGCTGGATGTTACTGAACTTGTTGATGATCACACCCAGCATTCACCAAAACCGAATGCGATGGTCTCTGGCAATGTGCGTGAGCTACTGGAATGCCCTGTGTGTCTAAATGCCATGTATCCTCCAATTCATCAGTGCTCCAATGGTCATACTCTATGTTCCGGATGCAAGCCCAGGGTTCACAACCGCTGCCCAACTTGCAGACATGAATTGGGTAACATAAGATGCCTTGCTCTGGAAAAGGTAGCTGCATCACTAGAGCTTCCATGCAAATATCAGAAC TTTGGGTGCTTGGGCATATATCCTTATTACTGCAAGCTGAAGCATGAGTCACAGTGCCAATACAGGCCCTATACTTGCCCATATGCTGGATCTGAATGCACTGTTGCTGGTGACATTCAGTATCTAGTAAGTCACTTGAAAGATGATCATAAGGTTGACATGCACAACGGAAGCACCTTCAATCACCGTTATGTCAAATCAAATCCTCATGAAGTTGAGAATGCTACCTGGATGCTCACGGTTTTCAGCTGTTTCGGCCAGTACTTTTGCCTGCACTTTGAGGCATTCCAGTTGGGCATGGCACCTGTCTACATCGCCTTCCTACGGTTCATGGGAGATGATGCAGAAGCCAAGAACTATAGCTACAGCCTGGAGGTCGGAGGCAGTGGTCGGAAGATGACCTGGCAAGGCGTCCCCCGAAGCATCAGAGACAGTCACAGGAAAGTTCGGGACAGCTACGACGGCCTTATCATCCAGCGGAACATGGCCTTGTTCTTCTCCGGTGGCGACAAGAAGGAGCTCAAACTGCGTGTCACCGGAAGGATTTGGAAGGAGCAGTGAATCACAACATCTCTAACTTCTCGTTGCGACTGTTAGTTTGATTGCGACATGGATCTTGATTCTTGAATTTCCAGGGTGAAATGGGATTAATGCGTAAGCGAATTGCTCCGGGAACTAGCTAGGCAGGACCCTGTAAGATTGTAGACTGTCTTAGCTACCAGCTGCCATTCTTCTTCTAGTGGTTCAGGAACATTTTGTATGGATGATTGTCTCGTGGCACTGATGTAGTAGAATTGAAGGCAAATCTCTTCTTTGCTCTTAACTTCTCCAAGAATTAGCCAATCTGGCGAATCTTCTGATGGTGACTCTGCCAAATGTAAATGATGTAGCTCTCCCCTTTGTATGATTCAAATCTATGTCAGGCCACCATTGTTTTGCCGGAAATGTACCCCTGCCAAACCTGCATTTGCTCCTACTACTACATGTTCAGCTGTAAATTTGAACAC]
consensusID : consensus_8316#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1471 fasta sequence
[GAGAAGAGAGAGAGAGAGGCTTTTAATTCGAATTCTCTCTCTCATCACGGCTTCTTCTGCTTCTCCTTCTCCTCCCCCCTCATCCCTCCTCCGCCGGTAGCCGCCGGCCGGAAGCGAGCAGCGAGCGAGACCGGAGCCCGCCGGAGCCGGTCTCGCTCCCCCCTCCTCCCTTGTTCGCGCCGCCCCCGAGGACCCCTTACAATATCTAGTGTATTTATGGCCTCAGTTACTTATATTGATGACTCCGGTTCTGAGGTAATTGATCCTCCAAAGACTGAGGTGCTGGATGTTACCGAACTTGCTGGTGATCCTGTTCCGCATTCACCAAAACCAAATGTGGTAGTTTCTAGCAGTGTGCGTGAACTGCTTGAATGTCCAGTCTGCCTGAGCGCAATGTATCCTCCCATTCATCAGTGCTCTAATGGTCATACATTGTGCTCTGGATGCAAACCAAGGGTTCACAATCGCTGTCCAACTTGTAGGCATGAACTGGGTAATATTAGATGTCTTGCTCTCGAGAAGGTGGCTGCGTCGCTTGAACTTCCATGCAAGTACCAGAACTTCGGGTGTGTAGGCATTTATCCTTACTACTGCAAGCTGAAGCATGAGTCACAGTGCCAATATAGGCCTTATAGCTGTCCATATGCTGGATCTGAATGCACAGTTGCTGGTGACATTCCATACTTGGTGAATCACTTGAAAGATGACCACAAGGTTGACATGCATAATGGCTGCACCTTCAACCATCGCTATGTCAAGTCGAATCCTCATGAAGTTGAGAATGCCACCTGGATGCTTACGGTTTTCAGCTGCTTTGGCCAGTACTTCTGCCTACATTTCGAAGCATTTCAGCTGGGGATGGCACCTGTGTACATCGCCTTCCTGAGGTTCATGGGTGATGACTTGGAAGCAAAGAACTACAGCTACAGCCTGGAGGTAGGAGGCACTGGCCGCAAAATGATCTGGCAAGGGGTTCCCCGGAGCATCAGAGACAGCCATCGGAAGGTCCGGGATAGCTATGATGGGCTTATCATCCAACGGAACATGGCCTTGTTCTTCTCTGGTGGAGAAAGGAAGGAGCTCAAATTGCGGGTCACTGGGAGAATTTGGAAGGAACAGTGAAAATAAAATGTGAAATGATCTGTTCATCGTTCTTAACCCTTGCATGAACCTATGTATCATCACAGTGCGAGAATTATAGCCATTCATAGGCAGTGACTCTAAAATGAAGACTTGTAATGTTATTAGCTTGTTTTAGCTACCATCTTCTGTTAGATTGGTGCCTGTGGATGACTAGATGACAGTCATGTAGACCAGAGTGGCACTATTGTAGAATTCCTGGCAAACTTCTCTTTGCCTTGAACTGCTTGTTGAGTTGCCATTCTGTGGTATAGGGAAATCTAATGGCAATTCATGAGATGAATGTGTTGAACTCTTTTTCATGTTTCCAGCATATTTCTAGCTTCTTTGT]
[+] EMBL AK058336 [GAGAAGAGAGAGAGAGAGGCTTTTAATTCGAATTCTCTCTCTCATCACGGCTTCTTCTGCTTCTCCTTCTCCTCCCCCCTCATCCCTCCTCCGCCGGTAGCCGCCGGCCGGAAGCGAGCAGCGAGCGAGACCGGAGCCCGCCGGAGCCGGTCTCGCTCCCCCCTCCTCCCTTGTTCGCGCCGCCCCCGAGGACCCCTTACAATATCTAGTGTATTTATGGCCTCAGTTACTTATATTGATGACTCCGGTTCTGAGGTAATTGATCCTCCAAAGACTGAGGTGCTGGATGTTACCGAACTTGCTGGTGATCCTGTTCCGCATTCACCAAAACCAAATGTGGTAGTTTCTAGCAGTGTGCGTGAACTGCTTGAATGTCCAGTCTGCCTGAGCGCAATGTATCCTCCCATTCATCAGTGCTCTAATGGTCATACATTGTGCTCTGGATGCAAACCAAGGGTTCACAATCGCTGTCCAACTTGTAGGCATGAACTGGGTAATATTAGATGTCTTGCTCTCGAGAAGGTGGCTGCGTCGCTTGAACTTCCATGCAAGTACCAGAACTTCGGGTGTGTAGGCATTTATCCTTACTACTGCAAGCTGAAGCATGAGTCACAGTGCCAATATAGGCCTTATAGCTGTCCATATGCTGGATCTGAATGCACAGTTGCTGGTGACATTCCATACTTGGTGAATCACTTGAAAGATGACCACAAGGTTGACATGCATAATGGCTGCACCTTCAACCATCGCTATGTCAAGTCGAATCCTCATGAAGTTGAGAATGCCACCTGGATGCTTACGGTTTTCAGCTGCTTTGGCCAGTACTTCTGCCTACATTTCGAAGCATTTCAGCTGGGGATGGCACCTGTGTACATCGCCTTCCTGAGGTTCATGGGTGATGACTTGGAAGCAAAGAACTACAGCTACAGCCTGGAGGTAGGAGGCACTGGCCGCAAAATGATCTGGCAAGGGGTTCCCCGGAGCATCAGAGACAGCCATCGGAAGGTCCGGGATAGCTATGATGGGCTTATCATCCAACGGAACATGGCCTTGTTCTTCTCTGGTGGAGAAAGGAAGGAGCTCAAATTGCGGGTCACTGGGAGAATTTGGAAGGAACAGTGAAAATAAAATGTGAAATGATCTGTTCATCGTTCTTAACCCTTGCATGAACCTATGTATCATCACAGTGCGAGAATTATAGCCATTCATAGGCAGTGACTCTAAAATGAAGACTTGTAATGTTATTAGCTTGTTTTAGCTACCATCTTCTGTTAGATTGGTGCCTGTGGATGACTAGATGACAGTCATGTAGACCAGAGTGGCACTATTGTAGAATTCCTGGCAAACTTCTCTTTGCCTTGAACTGCTTGTTGAGTTGCCATTCTGTGGTATAGGGAAATCTAATGGCAATTCATGAGATGAATGTGTTGAACTCTTTTTCATGTTTCCAGCATATTTCTAGCTTCTTTGT]
consensusID : consensus_8316#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 674 fasta sequence
[TAATGGTCATACATTGTGCTCCGGATGCAAACCAAGGGTTCACAATCGCCGTCCAACTCGTAGGCATGAACTGGGTAATATCAGATGTCTTGCTCTCGAGAAGGTGCCTGCGTCGCTTGAACTTCCATGCAAGTACCAGAACTTCGGGTGTGTAGGCATTTATCCTTACTACTGCAGCTGAAGCATGAGTCACAGTGCCAATATAGGCCTTATAGCTGTCCATATGCTGGATCTGAATGCACAGTTGCTGGTGACATTCCATACTTGGTGAATCACTTGAAAGATGACCACAAGGTTGACATGCATAATGGCTGCACCTTCAACCATCGCTATGTCAAGTCGAATCCTCATGAAGTTGAGAATGCCACCTGGATGCTTACGGTATCCCCTCGTTAACTCCACCATGTTAGTTATTGTGAAGTATATCACTGATGTTTACTTATGCAAAGATTGGTTCACTTGTCTGCTAAGATAGTCCATATTTCTGTACTGAGTTTTATGAGCCTTTCTGTAAAAATAAACATTGGTTCACTTGTACAGTATGATTGCACTCTGTACTTTTCATGTCAACTGAGGATGCTGATCATGCAGCATAGTTATTGGTCTAAAATAATCTCTCACCTATGAAGAAACTATGCATCAGAATATCCATCTGCTTCCATTTCCAAAAAAAA]
[-] EMBL CA759515 [TAATGGTCATACATTGTGCTCCGGATGCAAACCAAGGGTTCACAATCGCCGTCCAACTCGTAGGCATGAACTGGGTAATATCAGATGTCTTGCTCTCGAGAAGGTGCCTGCGTCGCTTGAACTTCCATGCAAGTACCAGAACTTCGGGTGTGTAGGCATTTATCCTTACTACTGCAGCTGAAGCATGAGTCACAGTGCCAATATAGGCCTTATAGCTGTCCATATGCTGGATCTGAATGCACAGTTGCTGGTGACATTCCATACTTGGTGAATCACTTGAAAGATGACCACAAGGTTGACATGCATAATGGCTGCACCTTCAACCATCGCTATGTCAAGTCGAATCCTCATGAAGTTGAGAATGCCACCTGGATGCTTACGGTATCCCCTCGTTAACTCCACCATGTTAGTTATTGTGAAGTATATCACTGATGTTTACTTATGCAAAGATTGGTTCACTTGTCTGCTAAGATAGTCCATATTTCTGTACTGAGTTTTATGAGCCTTTCTGTAAAAATAAACATTGGTTCACTTGTACAGTATGATTGCACTCTGTACTTTTCATGTCAACTGAGGATGCTGATCATGCAGCATAGTTATTGGTCTAAAATAATCTCTCACCTATGAAGAAACTATGCATCAGAATATCCATCTGCTTCCATTTCCAAAAAAAA]
consensusID : consensus_8316#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 648 fasta sequence
[CTGTGTACATCCCCTTCCTGAGGTTCATGGGGGATGACTTGGAAGCAAAGAACTACAGCTCCACCCTGGAGGTAGGAGGCCCTGGCCGCAAAATGATTTGGCAAGGGGTTCCCCGGAGCATCAGAGACACCCATTGGAAGGTCCGGGATAGCTATGATGGGGTTATCATCCAACGGAACATGGCCTTGTTTTTTTTTGGGGGAGAAAGGAAGGAGCTCAAATTGGGGGTCCCTGGGGGAATTTGGAAGGACCAGTGAAAATAAAATGGGAAAGGATTTGTTCATCGTTTTTAACCCTTGCATGAACCTATGTTTCATCCCAGTGGGGGAATTTTAGCCATTCATAGGCAGGGACTTTAAAAAGAAGACTTGTAATGTTATTAGCTTGTTTTAGCTCCCATTTTTTGTTAGATTGGGGCCTGTGGATGACTAGATGCCAGTCATGTAGACCAGAGGGGCCCTATTGTAGAATTCTTGGCAAAATTTTTTTTCCCTTGAACTGCTTGTTGAGTTGCCATTTTGGGGTATAGGGAAATTTAATGGCAATTCATGAGAGGAATGGGTTGAACTTTTTTTCATGTTTCCAGCATATTTTTAGCTTTTTAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATAAAGA]
[-] EMBL CB653854 [CTGTGTACATCCCCTTCCTGAGGTTCATGGGGGATGACTTGGAAGCAAAGAACTACAGCTCCACCCTGGAGGTAGGAGGCCCTGGCCGCAAAATGATTTGGCAAGGGGTTCCCCGGAGCATCAGAGACACCCATTGGAAGGTCCGGGATAGCTATGATGGGGTTATCATCCAACGGAACATGGCCTTGTTTTTTTTTGGGGGAGAAAGGAAGGAGCTCAAATTGGGGGTCCCTGGGGGAATTTGGAAGGACCAGTGAAAATAAAATGGGAAAGGATTTGTTCATCGTTTTTAACCCTTGCATGAACCTATGTTTCATCCCAGTGGGGGAATTTTAGCCATTCATAGGCAGGGACTTTAAAAAGAAGACTTGTAATGTTATTAGCTTGTTTTAGCTCCCATTTTTTGTTAGATTGGGGCCTGTGGATGACTAGATGCCAGTCATGTAGACCAGAGGGGCCCTATTGTAGAATTCTTGGCAAAATTTTTTTTCCCTTGAACTGCTTGTTGAGTTGCCATTTTGGGGTATAGGGAAATTTAATGGCAATTCATGAGAGGAATGGGTTGAACTTTTTTTCATGTTTCCAGCATATTTTTAGCTTTTTAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATAAAGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8316#1 ---GAGAAGAGAGAGAGAGAGGCTTTTAATTCGAATTCTCTCTCTCATCACGGCTTCTTC 57
consensus_8316#3 ------------------------------------------------------------
consensus_8316#0 GAAAACCACAAGAGACCNTAAAAAACTTCCTCTGATAGAGAGGAGACAGAGAGAGAGGAG 60
consensus_8316#2 ------------------------------------------------------------
consensus_8316#1 TGCTTCTCCTTCTCCTCCCCCCTCATCCCTCCTCCGCCGGTAGCCGCCGGCCGGAAGCGA 117
consensus_8316#3 ------------------------------------------------------------
consensus_8316#0 GAGCTTTATTTCGAATGCTCCTGACTCCTCCTCGGNTCCTCTTCCTCTCGAGCCCTTCAC 120
consensus_8316#2 ------------------------------------------------------------
consensus_8316#1 GCAGCGAGCGAGACCGGAGCCCGCCGGAGCCGGTCTCGCTCCCCCCTCCTCCCTTGTTCG 177
consensus_8316#3 ------------------------------------------------------------
consensus_8316#0 TGCNGTAGCATCATTCAAGCTGGACCCTCCCAGATCAAATCAAACCCGNTGGGNTGGCCT 180
consensus_8316#2 ------------------------------------------------------------
consensus_8316#1 CGCCGCCCCCGAGGACCCCTTACAATATCTAGTGTATTTATGGCCTCAGTTACTTATATT 237
consensus_8316#3 ------------------------------------------------------------
consensus_8316#0 TCCGTTTTGAGGGATTCTATATCTATAGGCTTGTCCATGGCATCAGTTACTTATCTTGAT 240
consensus_8316#2 ------------------------------------------------------------
consensus_8316#1 GATGACTCCGGTTCTGAGGTAATTGATCCTCCAAAGACTGAGGTGCTGGATGTTACCGAA 297
consensus_8316#3 ------------------------------------------------------------
consensus_8316#0 GATGCCCATTCTGAAGTTATCGATCCTCCAAAGAACGAGGAGATGCTGGATGTTACTGAA 300
consensus_8316#2 ------------------------------------------------------------
consensus_8316#1 CTTGCTGGTGATCCTGTTCCGCATTCACCAAAACCAAATGTGGTAGTTTCTAGCAGTGTG 357
consensus_8316#3 ------------------------------------------------------------
consensus_8316#0 CTTGTTGATGATCACACCCAGCATTCACCAAAACCGAATGCGATGGTCTCTGGCAATGTG 360
consensus_8316#2 ------------------------------------------------------------
consensus_8316#1 CGTGAACTGCTTGAATGTCCAGTCTGCCTGAGCGCAATGTATCCTCCCATTCATCAGTGC 417
consensus_8316#3 ------------------------------------------------------------
consensus_8316#0 CGTGAGCTACTGGAATGCCCTGTGTGTCTAAATGCCATGTATCCTCCAATTCATCAGTGC 420
consensus_8316#2 ------------------------------------------------------------
consensus_8316#1 TCTAATGGTCATACATTGTGCTCTGGATGCAAACCAAGGGTTCACAATCGCTGTCCAACT 477
consensus_8316#3 ------------------------------------------------------------
consensus_8316#0 TCCAATGGNCATACTCTATGTTCCGGATGCAAGCCCAGGGGTCACAACCGGTGCCCAACT 480
consensus_8316#2 ------------------------------------------------------------
consensus_8316#1 TGTAGGCATGAACTGGGTAATATTAGATGTCTTGCTCTCGAGAAGGTGGCTGCGTCGCTT 537
consensus_8316#3 ------------------------------------------------------------
consensus_8316#0 TGCAGACATGAATTGGGTAACATAAGATGCCTTGCTCTGGGAAAAGNAGCTGCATCACTA 540
consensus_8316#2 ------------------------------------------------------------
consensus_8316#1 GAACTTCCATGCAAGTACCAGAACTTC-GGGTGTGTAGGCATTTATCCTTACTACTGCAA 596
consensus_8316#3 ------------------------------------------------------------
consensus_8316#0 GAGCTTNCATGCAAATATCAAAACTTTTGGGNGCTTGGGCATATATCTTTATTACTGNAA 600
consensus_8316#2 ------------------------------------------------------------
consensus_8316#1 GCTGAAGCATGAGTCACAGTGCCAATATAGGCCTTATAGCTGTCCATATGCTGGATCTGA 656
consensus_8316#3 ------------------------------------------------------------
consensus_8316#0 GCTGAAGCATGAGTCACAGNGGCCATACAGGCCCTATACTTGNCCATATGCTGGATCTGA 660
consensus_8316#2 ------------------------------------------------------------
consensus_8316#1 ATGCACAGTTGCTGGTGACATTCCATACTTGGTGAATCACTTGAAAGATGACCACAAGGT 716
consensus_8316#3 ------------------------------------------------------------
consensus_8316#0 ATGCACTGGTGCTGGGGACATTTAAGATCTAANAAGGCACTTGNAANATGATCATAAGGG 720
consensus_8316#2 ------------------------------------------------------------
consensus_8316#1 TGACATGCATAATGGCTGCACCTTCAACCATCGCTATGTCAAGTCGAATCCTCATGAAGT 776
consensus_8316#3 ------------------------------------------------------------
consensus_8316#0 NGACATGCNCAACGGAAGNNCCTT-AATAACCGTTATGTCAAATCAAATCCTCATGAAGT 779
consensus_8316#2 ------------------------------------------------------------
consensus_8316#1 TGAGAATGCCACCTGGATGCTTACGGTTTTCAGCTGCTTTGGCCAGTACTTCTGCCTACA 836
consensus_8316#3 ------------------------------------------------------------
consensus_8316#0 TGAGAATGCTACCTGGATGCTCACGGTTTTCAGCTGTTTCGGCCAGTACTTTTGCCTGCA 839
consensus_8316#2 ------------------------------------------------------------
consensus_8316#1 TTTCGAAGCATTTCAGCTGGGGATGGCACCTGTGTACATCGCCTTCCTGAGGTTCATGGG 896
consensus_8316#3 -----------------------------CTGTGTACATCCCCTTCCTGAGGTTCATGGG 31
consensus_8316#0 CTTTGAGGCATTCCAGTTGGGCATGGCACCTGTCTACATCGCCTTCCTACGGTTCATGGG 899
consensus_8316#2 -----------------------------------------------TAATGGTCATACA 13
* * ****
consensus_8316#1 TGATGACTTGGAAGCAAA---GAACTACAGCTACAGCCTGGAGGTAGGAGGCACTGGCCG 953
consensus_8316#3 GGATGACTTGGAAGCAAA---GAACTACAGCTCCACCCTGGAGGTAGGAGGCCCTGGCCG 88
consensus_8316#0 AGATGATGCAGAAGCCAA---GAACTATAGCTACAGCCTGGAGGTCGGAGGCAGTGGTCG 956
consensus_8316#2 TTGTGCTCCGGATGCAAACCAAGGGTTCACAATCGCCGTCCAACTCGTAGGCATGAACTG 73
** ** ** ** * * * * * * * * **** *
consensus_8316#1 CAAAATGATCTGGCAAGGGGTTCCCCGGAGCATCAGAGACAGCCATCGGAAGGTCCGGGA 1013
consensus_8316#3 CAAAATGATTTGGCAAGGGGTTCCCCGGAGCATCAGAGACACCCATTGGAAGGTCCGGGA 148
consensus_8316#0 GAAGATGACCTGGCAAGGCGTCCCCCGAAGCATCAGAGACAGTCACAGGAAAGTTCGGGA 1016
consensus_8316#2 GGTAAT-ATCAGATGTCTTGCTCTCGAGAAGGTGCCTGC--GTCGCTTGAACTTCCATG- 129
** * * * * * * * * * *** * * *
consensus_8316#1 TAGCTATGATGGGCTTATCATCCAACGGAACATGGCCTTGTTCTTCTCTGGTGGAGAAAG 1073
consensus_8316#3 TAGCTATGATGGGGTTATCATCCAACGGAACATGGCCTTGTTTTTTTTTGGGGGAGAAAG 208
consensus_8316#0 CAGCTACGACGGCCTTATCATCCAGCGGAACATGGCCTTGTTCTTCTCCGGTGGCGACAA 1076
consensus_8316#2 CAAGTACCA-GAACTTCGGGTGTGTAGGCATTTATCCTTACTACTGCAGCTGAAGCATGA 188
* ** * * ** * ** * * **** * * *
consensus_8316#1 GAAGGAGCTCAAATTGCGGGTCACTGGGAGAATTTGGAAGGAACAGTGAAA-ATAAAATG 1132
consensus_8316#3 GAAGGAGCTCAAATTGGGGGTCCCTGGGGGAATTTGGAAGGACCAGTGAAA-ATAAAATG 267
consensus_8316#0 GAAGGAGCTCAAACTGCGTGTCACCGGAAGGATTTGGAAGGAGCAGTGAATCACAACATC 1136
consensus_8316#2 GTCACAGTGCCAATATAGG--CCTTATAGCTGTCCATATGCTGGATCTGAATGCACAGTT 246
* ** * ** * * * * * * * * *
consensus_8316#1 TGAAATGATCTGTTC--ATCGTT--CTTAACCCTTGCATGAACCTATGTATC---ATCAC 1185
consensus_8316#3 GGAAAGGATTTGTTC--ATCGTT--TTTAACCCTTGCATGAACCTATGTTTC---ATCCC 320
consensus_8316#0 TCTAACTTCTCGTTGCGACTGTTAGTTTGATTGCGACATGGATCTTGATTCTTGAATTTC 1196
consensus_8316#2 GCTGGTGACATTCCATACTTGGTGAATCACTTGAAAGATGACCACAAGGTTGACATGCAT 306
* * * ***
consensus_8316#1 AGTGC-GAGAATTATAGCCATTCATAGGCA----------GTGACTCTAAAATGAAGACT 1234
consensus_8316#3 AGTGG-GGGAATTTTAGCCATTCATAGGCA----------GGGACTTTAAAAAGAAGACT 369
consensus_8316#0 CAGGG-TGAAATGGGATTAATGCGTAAGCGAATTGCTCCGGGAACTAGCTAGGCAGGACC 1255
consensus_8316#2 AATGGCTGCACCTTCAACCATCGCTATGTCAAGT-----CGAATCCTCATGAAGTTGAGA 361
* * * ** ** * * * **
consensus_8316#1 -TGTAATGTTATTAGCTTGTTTTAGCTACCATCTT---CTGTTAGATTGGTGCCTGTGGA 1290
consensus_8316#3 -TGTAATGTTATTAGCTTGTTTTAGCTCCCATTTT---TTGTTAGATTGGGGCCTGTGGA 425
consensus_8316#0 CTGTAAGATTGT-AGACTGTCTTAGCTACCAGCTGCCATTCTTCTTCTAGTGGTTCAGGA 1314
consensus_8316#2 ATGCCAC-CTGGATGCTTACGGTATCCCCTCGTTAACTCCACCATGTTAGTTATTGTGAA 420
** * * * * ** * * * * * * * *
consensus_8316#1 TGACTAGATGACAGTCATGTAGACCAGAGTGGCACTATTGTAGAATTCCTGGCAAA-CTT 1349
consensus_8316#3 TGACTAGATGCCAGTCATGTAGACCAGAGGGGCCCTATTGTAGAATTCTTGGCAAA-ATT 484
consensus_8316#0 ACATTTTGTATGGATGAT-TGTCTCGTGGCACTGATGTAGTAGAATTGAAGGCAAATCTC 1373
consensus_8316#2 -----GTATATCACTGATGTTTACTTATGCAAAGAT-TGGTTCACTTGTCTGCTAAGATA 474
* * ** * * * * ** * ** ** ** *
consensus_8316#1 CTCTTTGCCT-TGAACTGCTTGTTGAGTT-GCCATTCTGTGGTATAGGGAAATC-TAATG 1406
consensus_8316#3 TTTTTTCCCT-TGAACTGCTTGTTGAGTT-GCCATTTTGGGGTATAGGGAAATT-TAATG 541
consensus_8316#0 TTCTTTGCTC-TTAACTTCTCCAAGAATTAGCCAATCTGGCGAATCTTCTGATGGTGACT 1432
consensus_8316#2 GTCCATATTTCTGTACTGAGTTTT--ATGAGCCTTTCT---GTAAAAATAAACATTGGTT 529
* * * *** * *** * * * * * *
consensus_8316#1 GCAATTCATGAGATGAATGTGTTGAACTCTTTTTCATGTTTCCAGCATATTTCTAGCT-- 1464
consensus_8316#3 GCAATTCATGAGAGGAATGGGTTGAACTTTTTTTCATGTTTCCAGCATATTTTTAGCT-- 599
consensus_8316#0 CTGCCAAATGTAAATGATGTAGCTCTCCCCTTTGTATGATTCAAATCTATGTCAGGCCAC 1492
consensus_8316#2 CACTTGTACAGTATGATTGCACT-CTGTACTTTTCATGTCAACTGAGGATGCTGATCATG 588
* * ** *** *** ** *
consensus_8316#1 -----T-----CTTTGT------------------------------------------- 1471
consensus_8316#3 -----T-----TTTAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATAAAGA- 648
consensus_8316#0 CATTGT-----TTTGCCGGAAATGTACCCCTGCCAAACCTGCATTTGCTCCTACTACTAC 1547
consensus_8316#2 CAGCATAGTTATTGGTCTAAAATAATCTCTCACCTATGAAGAAACTATGCATCAGAATAT 648
* *
consensus_8316#1 --------------------------
consensus_8316#3 --------------------------
consensus_8316#0 ATGTTCAGCTGTAAATTTGAACAC-- 1571
consensus_8316#2 CCATCTGCTTCCATTTCCAAAAAAAA 674
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||