cluster # 8327

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Oryza sativa
cluster # 8327 cluster # 8327 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8327#0 length = 855 sequences # 5
consensusID : consensus_8327#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 855
fasta sequence
                              [CCGCCCCCCACCGCCAACTTCACCCAGCTCTCCCAGATGTTCGCCGCCAAAGGCCTCGACGCCAAGGACCTCGTCGTCCTCTCCGGCGGCCACACGCTCGGCACGGCGCACTGCGCGCTCTTCTCCGACCGCCTCTACAACTTCACCGGCCTGGTGAACGACGGCGACGTGGACCCGGCGCTGGACGCGGCGTACATGGCGAAGCTCAAGGCCAAGTGCCGGAGCCTGAGCGACAACACCACCCTGTCGGAGATGGACCCCGGCAGCTTCCTCACCTTCGACGCCAGCTACTACCGGCTGGTGGCCAAGCGCCGCGGCATCTTCCACTCCGACTCCGCGCTGCTCACCGATCCCGTCACCAGGGCCTACGTCGAGCGCCAGGCCACCGGCCAC-TTCGCCGACGACTTCTTCCGCGACTTCGCCGACTCCATGGTGAAGATGAGCACCATT-GACGTGCTCACCGGGGC-GCAGGGCGAGATCAGGAACAAGTGCTAC-GCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCACTAATCAAAGGTTCGATTTATTTGGTTTCT-TCCGTCAATTTTTTTTAATTGGTTTCAGTTTATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTAC-AGTACAGATGAACGAATCCATCACTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATGCCAATGGGTTTCTTGTTTTGCTACTTTTTAATTTGTTTTTTGGGGTGCGTGGCATCTATGTTCAACTCTTGTGAATTCATTCATGATATATGTAATAAGTTCAAACGAGAC-ATAACTAAAATATACTCTCTTTCACAAAAAA]

[+] EMBL AK107894             [CCGCCCCCCACCGCCAACTTCACCCAGCTCTCCCAGATGTTCGCCGCCAAAGGCCTCGACGCCAAGGACCTCGTCGTCCTCTCCGGCGGCCACACGCTCGGCACGGCGCACTGCGCGCTCTTCTCCGACCGCCTCTACAACTTCACCGGCCTGGTGAACGACGGCGACGTGGACCCGGCGCTGGACGCGGCGTACATGGCGAAGCTCAAGGCCAAGTGCCGGAGCCTGAGCGACAACACCACCCTGTCGGAGATGGACCCCGGCAGCTTCCTCACCTTCGACGCCAGCTACTACCGGCTGGTGGCCAAGCGCCGCGGCATCTTCCACTCCGACTCCGCGCTGCTCACCGATCCCGTCACCAGGGCCTACGTCGAGCGCCAGGCCACCGGCCAC TTCGCCGACGACTTCTTCCGCGACTTCGCCGACTCCATGGTGAAGATGAGCACCATT GACGTGCTCACCGGGGC GCAGGGCGAGATCAGGAACAAGTGCTAC GCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCACTAATCAAAGGTTCGATTTATTTGGTTTCT TCCGTCAATTTTTTTTAATTGGTTTCAGTTTATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTAC AGTACAGATGAACGAATCCATCACTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATGCCAATGGGTTTC                                                                                                                                   ]
[+] EMBL BM037793             [                                                                                                                                                                                                                                                                                                                                                            tATCCCGTCATCAGGGCCTACGTCGAGCGCCAGGCCACCGGCCAC TTCGCCGACGACTTCTTCCGCGACTTCGCCGACTCCATGGTGAAGATGAGCACCATT GACGTGCTCACCGGGGC GCAGGGCGAGATCAGGAACAAGTGCTAC GCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCACTAATCAAAGGTTCGATTTATTTGGTTTCTGTCCGTC ATTTTTTTTAATTGGTTTCAGTTTATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTAC AGTACAGATGAACGAATCCCTCCCTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATGCC AT GGTTTCTT TTTTGCTAC TTTTAATTTGTTTTTTGGGGTGCGTGGCATCTATGTTC ACTCTTGTGAATTCATTCATGATATATGTAATAAGTTCAAAaaaa                                  ]
[+] EMBL BI810294             [                                                                                                                                                                                                                                                                                                                                                                                              CCACCGCCCACTTTCGCCGACGACTTCTTCCGCGACTTCGCCGACTCCATGGTGAAGATGAGCACCATTGGACGTGCTCACCGGGGCACCAGGGCGAGATCAGGAACAAGTGCTACAGCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCACTAATCAAAGGTTCGATTTATTTGGTTTCT TCCGTCAATTTTTTGTAATTGGTTTCAGTTTATTT C AAAAAGATCGTGTTAATTT GTTTGGGTACAAGTACAGATGAACGAATCCATCACTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATCCCCATGGGTTTCTTGTTTTGCTACTTTTTAATTTGTTTTTTGGGGTGCGTGGCATCTATGTTCAACTCTTGTGAATTCATTCATGATATATGTAATAAGTTCAAACGAGAC ATAACTAAA                      ]
[+] EMBL AU082069             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGCTCACCGGGGC GCAGGGCGAGATCAGGAACAAGT NTAC GCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCACTAATCAAAGGTTCGATTTATTTGGTTTCT TCCGTCAATTTTTTTTAATTGGTTTCAGTTTATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTAC AGTACAGATGAACGAATCCATCACTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATGCCAATGGGTTTCTTGTTTTGCTACTTTTTAATTTGTTTTTTGGGGTGCGTGGCATCTATGTTCAACTCTTGTGAATTCATTCATGATATATGTAATAAGTTCAAACGAGACAATAACTAAAATATACTCTCTTTCACAAAAAA]
[+] EMBL C20530               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTGAATCTGNATGNATGCGCACTAATCAAAGGTTCGATTTNTTTGGTTTCT TCCGTCAATTTTTTTTAATTGGTTTCAGTTTATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTAC AGTACAGATGAACGAATCCATCACTNCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATNCCAATGGGTTTCTTGTTTTGCTAaaaaaa                                                                                                                  ]




>consensus_8327#0
CCGCCCCCCACCGCCAACTTCACCCAGCTCTCCCAGATGTTCGCCGCCAAAGGCCTCGAC
GCCAAGGACCTCGTCGTCCTCTCCGGCGGCCACACGCTCGGCACGGCGCACTGCGCGCTC
TTCTCCGACCGCCTCTACAACTTCACCGGCCTGGTGAACGACGGCGACGTGGACCCGGCG
CTGGACGCGGCGTACATGGCGAAGCTCAAGGCCAAGTGCCGGAGCCTGAGCGACAACACC
ACCCTGTCGGAGATGGACCCCGGCAGCTTCCTCACCTTCGACGCCAGCTACTACCGGCTG
GTGGCCAAGCGCCGCGGCATCTTCCACTCCGACTCCGCGCTGCTCACCGATCCCGTCACC
AGGGCCTACGTCGAGCGCCAGGCCACCGGCCACTTCGCCGACGACTTCTTCCGCGACTTC
GCCGACTCCATGGTGAAGATGAGCACCATTGACGTGCTCACCGGGGCGCAGGGCGAGATC
AGGAACAAGTGCTACGCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCAC
TAATCAAAGGTTCGATTTATTTGGTTTCTTCCGTCAATTTTTTTTAATTGGTTTCAGTTT
ATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTACAGTACAGATGAACGAATCCATCA
CTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATGCCAATGG
GTTTCTTGTTTTGCTACTTTTTAATTTGTTTTTTGGGGTGCGTGGCATCTATGTTCAACT
CTTGTGAATTCATTCATGATATATGTAATAAGTTCAAACGAGACATAACTAAAATATACT
CTCTTTCACAAAAAA
clustalw multiple alignements is not computed in this case