These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8333#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2526 fasta sequence [CTGGGCTTCTTTCGGCCCAATCTCTCTCCCGTCGAGCCGGCCGCCTCCGCCGCTGGGGCGTTCCACTTCCCGACGGGCGCAGGCGGCCGGCGTCGACTCTCTCCTGTCCAACACCATAGTTGTGGCGGCCGATGCTATCGTTAAGGATCGCGGCCGCCTCGCGCCTGCGAGGGCTGCTGGGCGGCGGCGCAGCGACCGGGGCGCGCACACGCGCCTTCTCCTATGGGAGGGTGGTGGATGCCGCTGCCCGGGACGGCGAGCTCCGAGTTTTCGTGGTCGCCGGTGAGGTCTCAGGCGACTCGCTCGCCTCGCGCCTCATGGCGTCTCTCAGGGCGCTCTCACCGGTCCCCGTCCGTTTTGCTGGTGTTGGCGGGGAATTAATGCGCAATAAAGGCTTGCAGTCACTTTTTCCCATGGAGGAAATTTCCATAATGGGATTGTGGGAACTGCTGCCACACATATATAATATCAAGAGGAAGATTGAGGATACTGCAGATGCTGCTGTATTGTTTCAGCCTCATGCTGTAGTTACTGTTGATTCAAAGGGGTTCTCTTTTCGCCTCCTGAAGCAATTGAAATGTAGATACAATCAAGTTGCCCGTCCTCTACATGTCCACTATGTTGCACCATCATTCTGGGCCTGGAAAGATGGTGAAAGAAGGCTTGCAAAGTTGCATAATTTTGTGGACCATTTGTTGTGTATCCTTCCATTTGAGGAAGAAATTTGCAGATTAAATGGGTTGCCTGCTACATATGTGGGCCATCCATTATTGGATGATGCTATTGGCTTGAATATGGAGAAGGAACTATCTTCTGTCAATTCCATGCATCAACGAAGTGGTGAAGATTTTCGACAGGAGCATGAAATTTCCCCAGATTCCACAATCATAACCATACTGCCTGGAAGCAGGATGCAGGAGGTAGCCCGTATGCTTCCCATCTTCTTGCAAACTGTGCAACACCTAAGTCATACATTTAATGAACTGTCACTGGTCATCCCAGTTGCTCCTCATCGGGATGTGAGGGTATATGTTGATAATGTTGTTCGATCAGGGCCATTTCCAGTGGTACTGATAACTGGGGAAACACTAAAAGAAAGATATGATGCATTCAATGCTAGTAGAGCAGCATTATGCACTTCAGGAACAGCTGTCATGGAGCTGATGTTAGCAAAGCTACCCTGCGTGGTAGCTTACCGGGCTCATTTCATCACGGAATGTTTGATTCATCTGAGGAAAAAGATAGACTTTATTTCTCTACCCAACATTCTTTTAAACTCTCCAATTGTCCCTGAGATCCTTTTTGGGGCTTGCACAGCGGAAAATCTAGCTGCAAAACTAAGTGAGGTCATTTGTAATGATGAAGCCCGTCAGCTCCAAGTTGAATCAGCTGAACAGTTACTGGAGATGCTTTATGAACCTATCAAGCAACGAGGTGGCCTATTTCAAGAGGAGCTGCACAACTCGAGCCTGCCGTCAAATATCTACTCCCCAAGCACGATTGCAGCATTGACAGTGCTTTATACAGATAACCATCAACAAGCGGTGCACCAGAATTGAGTGGATGTCCTCAGTAGCAGACAAATATTTTTATCAGCCGTGATGGTCGCTATTGCGTGCAATCTCATCTTCTCCGTCTGCTGTTCGTGATGAAGAGTGTACTTTCTGCAGATCCTATTGGCTGCCCTAGGCCCACAATTGGAGAGGCAAAACGAGTTTTTAGGTAAAAAAGGCTTTTCAGTTCTTGGTTTCTGATTCTGAAGTGCCGCATGAAGTCAGGTCAGCATCGTATTATCATTATGGAGGATGGGAACGCATGTGTTCTGGTGGGTTTAGTGCGGGTCCTGGTCATCATTCTGCGATGATGCGTTTGGCGCAAGATTCTTCCATGGTTAGAATTTCCTGGAGTGAACAGTTGGCAGTTGATATGTGAGAACAATTACAAGAGATTTTTCGGATGGTTTTGATACTTTCATGGTCATCGAAATTACGAGATGAAGTATGAACGGATGCACAGTAACGTCATCAGGTCTGGGCTTGCTTGATGGCTGCTCTAGCCATAGAGGATCCTCGGTCAGTGAGAAAGCATAGATTCCCACGTAGCCGGCGATCACGTCACGGCTGAGCTCATCTAGGTGGTGGCCCATGCACGAGACGGCGAATCTTCCATGGAAAATATTTCGAAAATTGTTGCTTCGGTTTTAATTACAAGTTGCCGGCATTGCCAGTGTTCCACTTGGGAATATCTAACGCTTTTCTTATAACGATTTTACCTGCCAACTGCAGCATGGCATGGGGAAAAGTCTTGAGCCATCGTGTACTTAAATTGTGTAATCATCTGGTGCCACTAGCTATCCGTGAACTTCAGGAGTAAGTTGATCTAGAATGGTGACTGGTCAATGGAGGCCTTGTAATTGTAATTTGTAAAACAATCTAATGATGTAACATCTCAAGGCATTGCCAGTGTGGTCGCGGTGCATGGATTCGTTTCCCTGGCATCTCGGTAAGAAACAGTAATATTTCAGTA] [+] EMBL AK100905 [CTGGGCTTCTTTCGGCCCAATCTCTCTCCCGTCGAGCCGGCCGCCTCCGCCGCTGGGGCGTTCCACTTCCCGACGGGCGCAGGCGGCCGGCGTCGACTCTCTCCTGTCCAACACCATAGTTGTGGCGGCCGATGCTATCGTTAAGGATCGCGGCCGCCTCGCGCCTGCGAGGGCTGCTGGGCGGCGGCGCAGCGACCGGGGCGCGCACACGCGCCTTCTCCTATGGGAGGGTGGTGGATGCCGCTGCCCGGGACGGCGAGCTCCGAGTTTTCGTGGTCGCCGGTGAGGTCTCAGGCGACTCGCTCGCCTCGCGCCTCATGGCGTCTCTCAGGGCGCTCTCACCGGTCCCCGTCCGTTTTGCTGGTGTTGGCGGGGAATTAATGCGCAATAAAGGCTTGCAGTCACTTTTTCCCATGGAGGAAATTTCCATAATGGGATTGTGGGAACTGCTGCCACACATATATAATATCAAGAGGAAGATTGAGGATACTGCAGATGCTGCTGTATTGTTTCAGCCTCATGCTGTAGTTACTGTTGATTCAAAGGGGTTCTCTTTTCGCCTCCTGAAGCAATTGAAATGTAGATACAATCAAGTTGCCCGTCCTCTACATGTCCACTATGTTGCACCATCATTCTGGGCCTGGAAAGATGGTGAAAGAAGGCTTGCAAAGTTGCATAATTTTGTGGACCATTTGTTGTGTATCCTTCCATTTGAGGAAGAAATTTGCAGATTAAATGGGTTGCCTGCTACATATGTGGGCCATCCATTATTGGATGATGCTATTGGCTTGAATATGGAGAAGGAACTATCTTCTGTCAATTCCATGCATCAACGAAGTGGTGAAGATTTTCGACAGGAGCATGAAATTTCCCCAGATTCCACAATCATAACCATACTGCCTGGAAGCAGGATGCAGGAGGTAGCCCGTATGCTTCCCATCTTCTTGCAAACTGTGCAACACCTAAGTCATACATTTAATGAACTGTCACTGGTCATCCCAGTTGCTCCTCATCGGGATGTGAGGGTATATGTTGATAATGTTGTTCGATCAGGGCCATTTCCAGTGGTACTGATAACTGGGGAAACACTAAAAGAAAGATATGATGCATTCAATGCTAGTAGAGCAGCATTATGCACTTCAGGAACAGCTGTCATGGAGCTGATGTTAGCAAAGCTACCCTGCGTGGTAGCTTACCGGGCTCATTTCATCACGGAATGTTTGATTCATCTGAGGAAAAAGATAGACTTTATTTCTCTACCCAACATTCTTTTAAACTCTCCAATTGTCCCTGAGATCCTTTTTGGGGCTTGCACAGCGGAAAATCTAGCTGCAAAACTAAGTGAGGTCATTTGTAATGATGAAGCCCGTCAGCTCCAAGTTGAATCAGCTGAACAGTTACTGGAGATGCTTTATGAACCTATCAAGCAACGAGGTGGCCTATTTCAAGAGGAGCTGCACAACTCGAGCCTGCCGTCAAATATCTACTCCCCAAGCACGATTGCAGCATTGACAGTGCTTTATACAGATAACCATCAACAAGCGGTGCACCAGAATTGAGTGGATGTCCTCAGTAGCAGACAAATATTTTTATCAGCCGTGATGGTCGCTATTGCGTGCAATCTCATCTTCTCCGTCTGCTGTTCGTGATGAAGAGTGTACTTTCTGCAGATCCTATTGGCTGCCCTAGGCCCACAATTGGAGAGGCAAAACGAGTTTTTAGGTAAAAAAGGCTTTTCAGTTCTTGGTTTCTGATTCTGAAGTGCCGCATGAAGTCAGGTCAGCATCGTATTATCATTATGGAGGATGGGAACGCATGTGTTCTGGTGGGTTTAGTGCGGGTCCTGGTCATCATTCTGCGATGATGCGTTTGGCGCAAGATTCTTCCATGGTTAGAATTTCCTGGAGTGAACAGTTGGCAGTTGATATGTGAGAACAATTACAAGAGATTTTTCGGATGGTTTTGATACTTTCATGGTCATCGAAATTACGAGATGAAGTATGAACGGATGCACAGTAACGTCATCAGGTCTGGGCTTGCTTGATGGCTGCTCTAGCCATAGAGGATCCTCGGTCAGTGAGAAAGCATAGATTCCCACGTAGCCGGCGATCACGTCACGGCTGAGCTCATCTAGGTGGTGGCCCATGCACGAGACGGCGAATCTTCCATGGAAAATATTTCGAAAATTGTTGCTTCGGTTTTAATTACAAGTTGCCGGCATTGCCAGTGTTCCACTTGGGAATATCTAACGCTTTTCTTATAACGATTTTACCTGCCAACTGCAGCATGGCATGGGGAAAAGTCTTGAGCCATCGTGTACTTAAATTGTGTAATCATCTGGTGCCACTAGCTATCCGTGAACTTCAGGAGTAAGTTGATCTAGAATGGTGACTGGTCAATGGAGGCCTTGTAATTGTAATTTGTAAAACAATCTAATGATGTAACATCTCAAGGCATTGCCAGTGTGGTCGCGGTGCATGGATTCGTTTCCCTGGCATCTCGGTAAGAAACAGTAATATTTCAGTA] [+] EMBL CB664616 [ TCTGTCAATTCCATGCATCAACGAAGTGGTGAAGATTTTCGACAGGAGCATGAAATTTCCCCAGATTCCACAATCATAACCATACTGCCTGGAAGCAGGATGCAGGAGGTAGCCCGTATGCTTCCCATCTTCTTGCAAACTGTGCAACACCTAAGTCATACATTTAATGAACTGTCACTGGTCATCCCAGTTGCTCCTCATCGGGATGTGAGGGTATATGTTGATAATGTTGTTCGATCAGGGCCATTTCCAGTGGTACTGATAACTGGGGAAACACTAAAAGAAAGATATGATGCATTCAATGCTAGTAGAGCAGCATTATGCACTTCAGGAACAGCTGTCATGGAGCTGATGTTAGCAAAGCTACCCTGCGTGGTAGCTTACCGGGCTCATTTCATCACGGAATGTTTGATTCATCTGAGGAAAAAGATAGACTTTATTTCTCTACCCAACATTCTTTTAAACTCTCCAATTGTCCCTGAGATCCTTTTTGGGGCTTGCACAGCGGAAAATCTAGCTGCAAAACTAAGTGAGGTCATTTGTAATGATGAAGCCCGTCAGCTCCAAGTTGAATCAGCTGAACAGTTACTGGAGATGCTTTATGAACCTATCAAGCAACGAGGTGGCCTATTTCAAGAGGAGCTGCACAACTCGAGCCTGCCGTCAAATATCTACTCCCCAAGCACGATTGCAGCATTGACAGTGCTTTATACAGATAACCATCAACAAGCGGTGCACCAGAATTGAGTGGATGTCCTCAGTAGCAGACAAATATTTTTATCAGCCGTGATGGTCGCTATTGCGTGCAATCTCATCTTCTCCG ] [+] EMBL CF304715 [ TCGAGCCTGCCGTCAAATATCTACTCCCCAAGCACGATTGCAGCATTGACAGTGCTTTATACAGATAACCATCAACAAGCGGTGCACCAGAATTGAGTGGATGTCCTCAGTAGCAGACAAATATTTTTATCAGCCGTGATGGTCGCTATTGCGTGCAATCTCATCTTCTCCGTCTGCTGTTCGTGATGAAGAGTGTACTTTCTGCAGATCCTATTGGCTGCCCTAGGCCCACAATTGGAGAGGCAAAACGAGTTTTTAGGTAAAAAAGGCTTTTCAGTTCTTGGTTTCTGATTCTGAAGTGCCGCATGAAGTCAGGTCAGCATCGTATTATCATTATGGAGGATGGGAACGCATGTGTTCTGGTGGGTTTAGTGCGGGTCCTGGTCATCATTCTGCGATGATGCGTTTGGCGCAAGATTCTTCCATGGTTAGAATTTCCTGGAGTGAACAGTTGGCAGTTGATATGTGAGAACAAT ] [+] EMBL CA765757 [ GGCTTTT AGTTCTTGGTTTCTGATTCTGAAGTGCCGCATGAAGTCAGGTCAGCATCGTATTATCATTATGGAGGATGGGAACGCATGTGTTCTGGTGGGTTTAGTGCGGGTCCTGGTCATCATTCTGCGATGATGCGTTTGGCGCAAGATTCTTCCATGGTTAGAATTTCCTGGAGTGAACAGTTGGCAGTTGATATGTGAGAACAATTACAAGAGATTTTTCGGATGGTTTTGATACTTTCATGGTCATCGAGATTACGAGATGAAGTATGAACGGATGCACAGTAACGTCATCAGGTCTGGGCTTGCTTGATGGCTGCTCTAGCCATAGAGGATCCTCGGTCAGTGAGAAAGCATAGATTCCCACGTAGCCGGCGATCACGTCACGGCTGAGCTCATCTAGGTGGTGGCCCATGCATGAGACGGCGAATCTTCCATGGAAAATATTTCGAAAATTGTTGCTTCGGTTTTAATTACAAGTTGCCGGCATTGCCAGTGTTCCACTTGGGAATATCTAACTCTTTTCTTATAACGATTTTACCTGCCAACTGCAGGATGGCATGGGGAAAAGTTTTGAGCCATCGTGTACTTAAATTGTGTAATCATCTGGTGCCACTAGCTATCCGTGAACTTCAGGAGTAAGTTGATCTAGAATGGTGACTGGTCAATGGAGGCCTTGTAATTGTAATTTGTAAAACAATCTAATGATGTAACATCTCAAGGCATTG ] [-] EMBL CB664617 [ TTTTCAGTTCTTGGTTTCTGATTCTGAAGTGCCGCATGAAGTCAGGTCAGCATCGTATTATCATTATGGAGGATGGGAACGCATGTGTTCTGGTGGGTTTAGTGCGGGTCCTGGTCATCATTCTGCGATGATGCGTTTGGCGCAAGATTCTTCCATGGTTAGAATTTCCTGGAGTGAACAGTTGGCAGTTGATATGTGAGAACAATTACAAGAGATTTTTCGGATGGTTTTGATACTTTCATGGTCATCGAAATTACGAGATGAAGTATGAACGGATGCACAGTAACGTCATCAGGTCTGGGCTTGCTTGATGGCTGCTCTAGCCATAGAGGATCCTCGGTCAGTGAGAAAGCATAGATTCCCACGTAGCCGGCGATCACGTCACGGCTGAGCTCATCTAGGTGGTGGCCCATGCACGAGACGGCGAATCTTCCATGGAAAATATTTCGAAAATTGTTGCTTCGGTTTTAATTACAAGTTGCCGGCATTGCCAGTGTTCCACTTGGGAATATCTAACGCTTTTCTTATAACGATTTTACCTGCCAACTGCAGCATGGCATGGGGAAAAGTCTTGAGCCATCGTGTACTTAAATTGTGTAATCATCTGGTGCCACTAGCTATCCGTGAACTTCAGGAGTAAGTTGATCTAGAATGGTGACTGGTCAATGGAGGCCTTGTAATTGTAATTTGTAAAACAATCTAATGATGTAACATCTCAAGGCATTGCCAGTGTGGTCGCGGTGCATGGATTCGTTTCCCTGGCATCTCGGTAAGAAACAGTAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||