cluster # 8338

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Oryza sativa
cluster # 8338 cluster # 8338 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8338#0 length = 852 sequences # 5
consensusID : consensus_8338#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 852
fasta sequence
                              [ATGTCCTCATCATCATCAATGGAGTGCACCGGAAACATGTCGGCGGCGCCATTGCTCGTCTTGACGGTGGCGGTGCTCGCCGTGCTAGCCTCCACCTGCGCCGCCGACCCAGAGCCGATACAAGACTTCTGCGTGGCCGTGCCCCGTGCCGGCGGCGAGGCGTCGCCGGCATACCCGGGCTTCCCGTGCAAGCCGGCGTCCGCGGTCGTCTCCGACGACTTCTTCTTCGCCGGGCTCGCCGCCGCCGGC-AGCACGGACAACCCGTTC-GGGGCCAGCCTGAAGCCGGGCAACGTGGAGGCGTTCCCGGCGCTGAACACGCTCGGCGTCGCCATCAACCGCGTCGACCTCGCCCCCGGC-GGCGTCAACCCG-CTGC-ACAGCCACCCGCGCGCCGCCGAGCTGGTGCACGTCATCACCGGCCGGATGC-TCGTC-GGGTTCGTGAGCA-CGGCGGGGAAGTACTACTCCAAGGTGGTCG-GCGAGGGGGAGACGTTCGCCATCCCGCG-CGGGCTGATGCACTTCCAGTACAACCCTGGGAACGCCTCCGCCCGCGCCATGACGGTGTTCAACAGCCAGCTCCCCGGCGTCGTGCCCGCCGCGACGGCGCTGTTCGGCGCCGACCCGGAGATCCCCGACGCCGTCCTCGCCAAGAGCTTCCAGGTGGACGCCGAGATCATCAAACTGCTCAAGTCCAAGTTCAAGAAGTGACACTGACGTCTCATCCGCCATGGCTACAGCATATCTGTTTTGCTTTAGCTGTCCTAGATACAGTAAATAGAGTTGTTTCACGTTTGATATTTTGGTCCGATATTTGCCCATTTGGCACATCAATAAAGTAAATTTGAATTGTCCTAAAAA]

[+] EMBL AK062698             [ATGTCCTCATCATCATCAATGGAGTGCACCGGAAACATGTCGGCGGCGCCATTGCTCGTCTTGACGGTGGCGGTGCTCGCCGTGCTAGCCTCCACCTGCGCCGCCGACCCAGAGCCGATACAAGACTTCTGCGTGGCCGTGCCCCGTGCCGGCGGCGAGGCGTCGCCGGCATACCCGGGCTTCCCGTGCAAGCCGGCGTCCGCGGTCGTCTCCGACGACTTCTTCTTCGCCGGGCTCGCCGCCGCCGGC AGCACGGACAACCCGTTC GGGGCCAGCCTGAAGCCGGGCAACGTGGAGGCGTTCCCGGCGCTGAACACGCTCGGCGTCGCCATCAACCGCGTCGACCTCGCCCCCGGC GGCGTCAACCCG CTGC ACAGCCACCCGCGCGCCGCCGAGCTGGTGCACGTCATCACCGGCCGGATGC TCGTC GGGTTCGTGAGCA CGGCGGGGAAGTACTACTCCAAGGTGGTCG GCGAGGGGGAGACGTTCGCCATCCCGCG CGGGCTGATGCACTTCCAGTACAACCCTGGGAACGCCTCCGCCCGCGCCATGACGGTGTTCAACAGCCAGCTCCCCGGCGTCGTGCCCGCCGCGACGGCGCTGTTCGGCGCCGACCCGGAGATCCCCGACGCCGTCCTCGCCAAGAGCTTCCAGGTGGACGCCGAGATCATCAAACTGCTCAAGTCCAAGTTCAAGAAGTGACACTGACGTCTCATCCGCCATGGCTACAGCATATCTGTTTTGCTTTAGCTGTCCTAGATACAGTAAATAGAGTTGTTTCACGTTTGATATTTTGGTCCGATATTTGCCCATTTGGCACATCAATAAAGTAAATTT               ]
[+] EMBL AF072694             [               TCAATGGAGTGCACCGGAAACATGTCGGCGGCGCCATTGCTCGTCTTGACGGTGGCGGTGCTCGCCGTGCTAGCCTCCACCTGCGCCGCCGACCCAGAGCCGATACAAGACTTCTGCGTGGCCGTGCCCCGTGCCGGCGGCGAGGCGTCGCCGGCATACCCGGGCTTCCCGTGCAAGCCGGCGTCCGCGGTCGTCTCCGACGACTTCTTCTTCGCCGGGCTCGCCGCCGCCGGC AGCACGGACAACCCGTTC GGGGCCAGCCTGAAGCCGGGCAACGTGGAGGCGTTCCCGGCGCTGAACACGCTCGGCGTCGCCATCAACCGCGTCGACCTCGCCCCCGGC GGCGTCAACCCG CTGC ACAGCCACCCGCGCGCCGCCGAGCTGGTGCACGTCATCACCGGCCGGATGC TCGTC GGGTTCGTGAGCA CGGCGGGGAAGTACTACTCCAAGGTGGTCG GCGAGGGGGAGACGTTCGCCATCCCGCG CGGGCTGATGCACTTCCAGTACAACCCTGGGAACGCCTCCGCCCGCGCCATGACGGTGTTCAACAGCCAGCTCCCCGGCGTCGTGCCCGCCGCGACGGCGCTGTTCGGCGCCGACCCGGAGATCCCCGACGCCGTCCTCGCCAAGAGCTTCCAGGTGGACGCCGAGATCATCAAACTGCTCAAGTCCAAGTTCAAGAAGTGACACTGACGTCTCATCCGCCATGGCTACAGCATATCTGTTTTGCTTTAGCTGTCCTAGATACAGTAAATAGAGTTGTTTCACGTTTGATATTTTGGTCCGATATTTGCCCATTTGGCACATCAATAAAGTAAATTTGAATTGTCCTAAAAA]
[+] EMBL C73414               [                CAATGGAGTGCACCGGAAACATGTCGGCGGCGCCATTGCTCGTCTTGACGGTGGCGGTGCTCGCCGTGCTAGCCTCCACCTGCGCCGCCGACCCAGAGCCGATACAAGACTTCTGCGTGGCCGTGCCCCGNGCCGGCGGCGAGGCGTCG CGGCATACCCGGGCTTCCCGTGCAAGCCGGCGTCCGCGGTCGTCTCCGACGACTTCTTCTTCGCCGGGCTCGCCGCCGCCGGC AGCACGGACAACCCGTTC GGGGCCAGCCTGAAGCCGGGCAACGTGGAGGCGTTCCCGGCGCTGAACACGCTCGGCGTCGCAATCAACCGCGTCGACCTTGCCCCCGGG GGCGTCAACCCG NTGC ACAG CAACCGTGCGCCGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU101261             [                                                                                                                                                                                                                                                      GGCAAGCACGGACAACCNGTTCGGGGGCCAG CTNAAGCCGGCCAACGTGAAGGCGTTCCCGGCGCTGAACACGCTGGGCGTCGCCATCAACCGCGTCGACCTCGCCCCCGGCGGGCGTCAACCCG TTGC ACAGCCACCCGCGCGCCGCCGAGCTGGTGCACGTCATCACCGGCCGGATGC TCGTC GGGTTCGTGAGCA CGGCGGGGAAGTACTACTCCAAGGTGGTCG GCGAGGGGGAGACGTTCGCCATCCCGCG CGGGCTGATGCACTTCCAGTACAACCCTGGGAACGCCTCCGCCCGCGCCATGACGGTGTTCAACAGCCAGCTCCCCGGCGTCGTGCCCGCCGCGACGGCGCTGTTCGGCGCCGACCCGGAGATCCCCGACGCCGTCCTCGCCAAGAGCTTCCAGGTGGACGCCGAGATCATCAAACTGCTCAAGTCCAAGTTCAAGAAGTGACACTGACGTCTCATCCGCCATGGCTACAGCATATCTGTTTTGCTTTAGCTGTCCTAGATACAGTAAATAGAGTTGTTTCACGTTTGATATTTTGGTCCGATATTTGCCCATTTGGCACATCAATAAAGTAAATTTGAATTGTCCTAAAAA]
[+] EMBL BI806253             [                                                                                                                                                                                                                                                                                                                                                       CGA CTCGGCCCCCGC GGCGTC ACCCGTCTGCTACAGCCACCCGCGC CCGCCGAGCTGGTGCACGTCATCACCGGCCGGATGCTTCGTCTGGGTTCGTGAGCATCGGCGGGGAAGTACTACTCCAAGGT GTCGTGCGAGGGGGAGACGTTCGCCATCCCGCGTCGGGCTGATGCACTTCCAGTACAACCCTGGGAACGCCTCCGCCCGCGCCATGACGGTGTTCAACAGCCAGCTCCCCGGCGTCGTGCCCGCCGCGACGGCGCTGTTCGGCGCCGACCCGGAGATCCCCGAC CCGTCCTCGCCAAGAGCTTCCAGGTGGACGCCGAGATCATCAAACTGCTCAAGTCCAAGTTCAAGAAGTGACACTGACGTCTCATCCGCCATGGCTACAGCATATCTGTTTTGCTTTAGCTGTCCTAGATACAGTAAATAGAGTTGTTTCACGTTTGATATTTTGGTCCGATATTTGCCCATTTGGCACATCAATAAAGTAAATTTGAATTGTCCTAAAAA]




>consensus_8338#0
ATGTCCTCATCATCATCAATGGAGTGCACCGGAAACATGTCGGCGGCGCCATTGCTCGTC
TTGACGGTGGCGGTGCTCGCCGTGCTAGCCTCCACCTGCGCCGCCGACCCAGAGCCGATA
CAAGACTTCTGCGTGGCCGTGCCCCGTGCCGGCGGCGAGGCGTCGCCGGCATACCCGGGC
TTCCCGTGCAAGCCGGCGTCCGCGGTCGTCTCCGACGACTTCTTCTTCGCCGGGCTCGCC
GCCGCCGGCAGCACGGACAACCCGTTCGGGGCCAGCCTGAAGCCGGGCAACGTGGAGGCG
TTCCCGGCGCTGAACACGCTCGGCGTCGCCATCAACCGCGTCGACCTCGCCCCCGGCGGC
GTCAACCCGCTGCACAGCCACCCGCGCGCCGCCGAGCTGGTGCACGTCATCACCGGCCGG
ATGCTCGTCGGGTTCGTGAGCACGGCGGGGAAGTACTACTCCAAGGTGGTCGGCGAGGGG
GAGACGTTCGCCATCCCGCGCGGGCTGATGCACTTCCAGTACAACCCTGGGAACGCCTCC
GCCCGCGCCATGACGGTGTTCAACAGCCAGCTCCCCGGCGTCGTGCCCGCCGCGACGGCG
CTGTTCGGCGCCGACCCGGAGATCCCCGACGCCGTCCTCGCCAAGAGCTTCCAGGTGGAC
GCCGAGATCATCAAACTGCTCAAGTCCAAGTTCAAGAAGTGACACTGACGTCTCATCCGC
CATGGCTACAGCATATCTGTTTTGCTTTAGCTGTCCTAGATACAGTAAATAGAGTTGTTT
CACGTTTGATATTTTGGTCCGATATTTGCCCATTTGGCACATCAATAAAGTAAATTTGAA
TTGTCCTAAAAA
clustalw multiple alignements is not computed in this case