These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8343#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2402 fasta sequence [TCCACTCGATCTGCTACCTCCTGGACACGGCGACGTACGGCTGATCCGTCGTCCGGTGGCTGGGGTTCCTGGCGGGAGACGCCGGTCGTGCAGAGGTGCTCTTAAATTTATAATAATGAAGGATTTTATGAAACTTTATCATCAGCGGGAAATCCAGCTGCTTGTGCTCCTCAGCTTCACACTCCAAATGTTCCTCTTTTTCACCGGCAGTCTTCGGAGGCGCAACACCAATGTGTTCCTCAGGGTTTCTATCTGGACAGCTTATTTGGGAGCAGACTTCACAGCAGTTTATGCTCTTGGTTACCTCTCACGACACGATGATATTCAGAGGCAAATGTCAGGGGGAACCCAGCCACTAGCTTTCTTTTGGGCATCATTCCTCCTCATCCATCTTGGTGGGCAGGACAGCATCACCGCATTTTCAATGGCAGACAACAACTTGTGGCTGAGGCATCTCTTGAACTTGGTGGTGCAAGTAGTCCTAGCTGCATATGTTTTCTGGAAATCGCCAGCAAGGCACAGTGCAGAGCTTCTAGTTTCAGGTGTCCTTGTGTTCATTGCCGGAGTTACCAAGTATGGAGAAAGGACACTGTCTCTCAAGTATGGAAGGTTTAAAAGTCTCGAGAGCTCAACTGGAGATCACTACAAGAAACGGTTTCCGGAATTAAACGATTCGGATCATGGCTATTCTAAGGTAGTTTTGGATGCTCTATGTTCAATGCTAAATGTCCACAATGTCTTTGCAGCGCGTAACCCATTTGTTAATGGTCCAGAATCTAATTCCCCAGTTGTTATTGCTCGAGACACGGTACAGGGAACCAAAAAAATGCTCAAGGTGGTGGAGCTTGAGC-TTGCAATCATGTACGATGACCTCTACACAAAGGCTCTTGTGCTGAGAACAAGGATAGGCATGATTCTCCGATGCACCTCTCACGCATGTTCCCTCCTTGCTTTTGCACTGTTCCTTACATGTGACAAACGGAGGTACAACGGAGTTGATGTTGCGATCACCTATTCGCTGTTTATCGGAGGCTTTTTCCTTGATCTTTCTGCAGTGTTTATCTTCATAATGTCTCCATGGACTTGGGCGTGGTTGAAGGCTCAGAAATGCGACCGGCTGGCTAGCTTGTCCTGGTTCCTTTTTTCCAGTGATATTGGCTGGCCAGAGAAAAGGCCACGGTGGTCGAATTCCATCGGACAGTACAAGTTGCTGAACTGGGTTTCTGGTGGAGACCAGCCAAGATCATACAACCAGAAAGTGGTGGCTCTAGTGAGAAGATTGTCGGGTTTAGTCGGTGTTGGAAAAGAAGATTTGTTCTGGCTGAGCAAGACGTTGGACACTGAGCATGTGGAGGCCGATGAAAAGACGATGGAGTTTGTCGTAAAGGGGATTAGTAGCTTGAGCGATGAAGTCTCCGAGCAACAACAATGGCAGCATCTTGGCCCATTGCTGAAAAAGATACGGGTCTGTTTTGTCGCAGATATGGGATGTGCTATTGTGGTGATGCACATATTCACTCAAGTATATTTGAATGCAGTAGAAGCCGCGGCAGCGGGAGACGAAGGAGGGGGAGATGCAGATGATATGGTGGAGGTGTGCCGAAAACTGTCCAACTACATGATGTACCTCTTTGTCAACCACCCTTCCATGCTTCCGCTCAATGCCAGCTCCGAAGCCACCGTGGTTGAGTTTGCGAAATCGAGAGAGGAACTGTCTAGGACACAACAAGGAAGCAAGATGACCCTGGATGAGCTATACAACATTATACAGCAGAATAAGGATGGTGTGTCAA-GGCAAGGAACAATGGAGGAAATGTACAA-GATGATACTAGAAGAGGATGTCCAACCAAGCTGGGGTGCAGTGGAGGAGATGGCAGCAATGTGGCTGCGGTTCCTCATCTTCGCCGCCGGCAGGTCCAATGGTAAGGTGCACGCGGCGGAGCTGGCCAGCGGAGGGGAGCTCATCACCTTCGCCTGGCTGCTCATGGCCCGGGAAGGGCTCGGCGAATCCGAGAGGAGAAGGGTCCGGCTGACGTCCACCATATCGTCCATTTCGTCTGCTGATTCTGCTGGTGCTGCAGCTGATTTGAAGGAAGCATATGCGTTCTTTTTCAACTGATTAAAGTTTGAAAGTTTGATTAGTACTTTAGCTGATTTGAGTAGCTTTGTTTGTTGTTCCCTACATCTTTATAATCTAAAGCTATGTATGAAGTAGAGTTAGGATTAATAACCAGCAATCTTCCTGTGATAAGAGATAATGCATGGCTGATATGATTTGGGCTTTCTATAGCTGCCAGCCCCTATATATATCCC-AGATTTTCTCCTTCCTTTTCTCTTGACTGTAACCGTATCTGTGTAATACTTCGCCATATATACAGTTGTAAGAAGTTGAACAAGATTGT] [+] EMBL AK065026 [TCCACTCGATCTGCTACCTCCTGGACACGGCGACGTACGGCTGATCCGTCGTCCGGTGGCTGGGGTTCCTGGCGGGAGACGCCGGTCGTGCAGAGGTGCTCTTAAATTTATAATAATGAAGGATTTTATGAAACTTTATCATCAGCGGGAAATCCAGCTGCTTGTGCTCCTCAGCTTCACACTCCAAATGTTCCTCTTTTTCACCGGCAGTCTTCGGAGGCGCAACACCAATGTGTTCCTCAGGGTTTCTATCTGGACAGCTTATTTGGGAGCAGACTTCACAGCAGTTTATGCTCTTGGTTACCTCTCACGACACGATGATATTCAGAGGCAAATGTCAGGGGGAACCCAGCCACTAGCTTTCTTTTGGGCATCATTCCTCCTCATCCATCTTGGTGGGCAGGACAGCATCACCGCATTTTCAATGGCAGACAACAACTTGTGGCTGAGGCATCTCTTGAACTTGGTGGTGCAAGTAGTCCTAGCTGCATATGTTTTCTGGAAATCGCCAGCAAGGCACAGTGCAGAGCTTCTAGTTTCAGGTGTCCTTGTGTTCATTGCCGGAGTTACCAAGTATGGAGAAAGGACACTGTCTCTCAAGTATGGAAGGTTTAAAAGTCTCGAGAGCTCAACTGGAGATCACTACAAGAAACGGTTTCCGGAATTAAACGATTCGGATCATGGCTATTCTAAGGTAGTTTTGGATGCTCTATGTTCAATGCTAAATGTCCACAATGTCTTTGCAGCGCGTAACCCATTTGTTAATGGTCCAGAATCTAATTCCCCAGTTGTTATTGCTCGAGACACGGTACAGGGAACCAAAAAAATGCTCAAGGTGGTGGAGCTTGAGC TTGCAATCATGTACGATGACCTCTACACAAAGGCTCTTGTGCTGAGAACAAGGATAGGCATGATTCTCCGATGCACCTCTCACGCATGTTCCCTCCTTGCTTTTGCACTGTTCCTTACATGTGACAAACGGAGGTACAACGGAGTTGATGTTGCGATCACCTATTCGCTGTTTATCGGAGGCTTTTTCCTTGATCTTTCTGCAGTGTTTATCTTCATAATGTCTCCATGGACTTGGGCGTGGTTGAAGGCTCAGAAATGCGACCGGCTGGCTAGCTTGTCCTGGTTCCTTTTTTCCAGTGATATTGGCTGGCCAGAGAAAAGGCCACGGTGGTCGAATTCCATCGGACAGTACAAGTTGCTGAACTGGGTTTCTGGTGGAGACCAGCCAAGATCATACAACCAGAAAGTGGTGGCTCTAGTGAGAAGATTGTCGGGTTTAGTCGGTGTTGGAAAAGAAGATTTGTTCTGGCTGAGCAAGACGTTGGACACTGAGCATGTGGAGGCCGATGAAAAGACGATGGAGTTTGTCGTAAAGGGGATTAGTAGCTTGAGCGATGAAGTCTCCGAGCAACAACAATGGCAGCATCTTGGCCCATTGCTGAAAAAGATACGGGTCTGTTTTGTCGCAGATATGGGATGTGCTATTGTGGTGATGCACATATTCACTCAAGTATATTTGAATGCAGTAGAAGCCGCGGCAGCGGGAGACGAAGGAGGGGGAGATGCAGATGATATGGTGGAGGTGTGCCGAAAACTGTCCAACTACATGATGTACCTCTTTGTCAACCACCCTTCCATGCTTCCGCTCAATGCCAGCTCCGAAGCCACCGTGGTTGAGTTTGCGAAATCGAGAGAGGAACTGTCTAGGACACAACAAGGAAGCAAGATGACCCTGGATGAGCTATACAACATTATACAGCAGAATAAGGATGGTGTGTCAA GGCAAGGAACAATGGAGGAAATGTACAA GATGATACTAGAAGAGGATGTCCAACCAAGCTGGGGTGCAGTGGAGGAGATGGCAGCAATGTGGCTGCGGTTCCTCATCTTCGCCGCCGGCAGGTCCAATGGTAAGGTGCACGCGGCGGAGCTGGCCAGCGGAGGGGAGCTCATCACCTTCGCCTGGCTGCTCATGGCCCGGGAAGGGCTCGGCGAATCCGAGAGGAGAAGGGTCCGGCTGACGTCCACCATATCGTCCATTTCGTCTGCTGATTCTGCTGGTGCTGCAGCTGATTTGAAGGAAGCATATGCGTTCTTTTTCAACTGATTAAAGTTTGAAAGTTTGATTAGTACTTTAGCTGATTTGAGTAGCTTTGTTTGTTGTTCCCTACATCTTTATAATCTAAAGCTATGTATGAAGTAGAGTTAGGATTAATAACCAGCAATCTTCCTGTGATAAGAGATAATGCATGGCTGATATGATTTGGGCTTTCTATAGCTGCCAGCCCCTATATATATCCC AGATTTTCTCCTTCCTTTTCTCTTGACTGTAACCGTATCTGTGTAATACTTCGCCATATATACAGTTGTAAGAAGTTGAACAAGATTGT] [+] EMBL CB671985 [ GGCTGATCCGTCGTCCGGTGGCTGGGGTTCCTGGCGGGAGACGCCGGTCGTGCAGAGGTGCTCTTAAATTTATAATAATGAAGGATTTTATGAAACTTTATCATCAGCGGGAAATCCAGCTGCTTGTGCTCCTCAGCTTCACACTCCAAATGTTCCTCTTTTTCACCGGCAGTCTTCGGAGGCGCAACACCAATGTGTTCCTCAGGGTTTCTATCTGGACAGCTTATTTGGGAGCAGACTTCACAGCAGTTTATGCTCTTGGTTACCTCTCACGACACGATGATATTCAGAGGCAAATGTCAGGGGGAACCCAGCCACTAGCTTTCTTTTGGGCATCATTCCTCCTCATCCATCTTGGTGGGCAGGACAGCATCACCGCATTTTCAATGGCAGACAACAACTTGTGGCTGAGGCATCTCTTGAACTTGGTGGTGCAAGTAGTCCTAGCTGCATATGTTTTCTGGAAATCGCCAGCAAGGCACAGTGCAGAGCTTCTAGTTTCAGGTGTCCTTGTGTTCATTGCCGGAGTTACCAAGTATGGAGAAAGGACACTGTCTCTCAAGTATGGAAGGTTTAAAAGTCTCGAGAGCTCAACTGGAGATCACTACAAGAAACGGTTTCCGGAATTAAACGATTCGGATCATGGCTATTCTAAGGTAGTTTTGGATGCTCTATGTTCAATGCTAAATGTCCACAATGTCTTTGCAGCGCGTAACCCATTTGTTAATGGTCCAGAATCTAATTCCCCAGTTGTTATTGCTCGAGACACGGTACAGGGAACCAAAAAAATGCTCAAGGTGGTGGAGCTTGAGCTTTGC ATCATGTACGATG ] [+] EMBL CB647959 [ GCTCCTCACCTTCACACTCCAAATGTTCCTCTTTTTCACCGGCAGTCTTCGGAGGCGCAACACCAATGTGTTCCTCAGGGTTTCTATCTGGACAGCTTATTTGGGAGCAGACTTCACAGCAGTTTATGCTCTTGGTTACCTCTCACGACACGATGATATTCAGAGGCAAATGTCAGGGGGAACCCAGCCACTAGCTTTCTTTTGGGCATCATTCCTCCTCATCCATCTTGGTGGGCAGGACAGCATCACCGCATTTTCAATGGCAGACAACAACTTGTGGCTGAGGCATCTCTTGAACTTGGTGGTGCAAGTAGTCCTAGCTGCATATGTTTTCTGGAAATCGCCAGCAAGGCACAGTGCAGAGCTTCTAGTTTCAGGTGTCCTTGTGTTCATTGCCGGAGTTACCAAGTATGGAGAAAGGACACTGTCTCTCAAGTATGGAAGGTTTAAAAGTCTCGAGAGCTCAACTGGAGATCACTACAAGAAACGGTTTCCGGAATTAAACGATTCGGATCATGGCTATTCTAAGGTAGTTTTGGATGCTCTATGTTCAATGCTAAATGTCCACAATGTCTTTGCAGCGCGTAACCCATTTGTTAATGGTCCAGAATCTAATTCCCCAGTTGTTATTGCTCGAGACACGGTACAGGGAACCAAAAAAATGCTCAAGGTGGTGGAGCTTGAGC TTGCAATCATGTACGATGACCTCTACACAAAGGCTCTTGTGCTGAGAAC AGGATAGGCATGATTCTCCGATGCACCTCTCACGCATGTTCCCTCCTTGCTTTTGCACTGTTCCTTA ] [-] EMBL CB671986 [ ATGTGCTATTGTGGTGATGCACATATTCACTCAAGTATATTTGAATGCAGTAGAAGCCGCGGCAGCGGGAGACGAAGGAGGGGGAGATGCAGATGATATGGTGGAGGTGTGCCGAAAACTGTCCAACTACATGATGTACCTCTTTGTCAACCACCCTTCCATGCTTCCGCTCAATGCCAGCTCCGAAGCCACCGTGGTTGAGTTTGCGAAATCGAGAGAGGAACTGTCTAGGACACAACAAGGAAGCAAGATGACCCTGGATGAGCTATACAACATTATACAGCAGAATAAGGATGGTGTGTCAA GGCAAGGAACAATGGAGGAAATGTACAA GATGATACTAGAAGAGGATGTCCAACCAAGCTGGGGTGCAGTGGAGGAGATGGCAGCAATGTGGCTGCGGTTCCTCATCTTCGCCGCCGGCAGGTCCAATGGTAAGGTGCACGCGGCGGAGCTGGCCAGCGGAGGGGAGCTCATCACCTTCGCCTGGCTGCTCATGGCCCGGGAAGGGCTCGGCGAATCCGAGAGGAGAAGGGTCCGGCTGACGTCCACCATATCGTCCATTTCGTCTGCTGATTCTGCTGGTGCTGCAGCTGATTTGAAGGAAGCATATGCGTTCTTTTTCAACTGATTAAAGTTTGAAAGTTTGATTAGTACTTTAGCTGATTTGAGTAGCTTTGTTTGTTGTTCCCTACATCTTTATAATCTAAAGCTATGTATGAAGTAGAGTTAGGATTAATAACCAGCAATCTTCCTGTGATAAGAGATAATGCATGGCTGATATGATTTGG ] [-] EMBL CB647960 [ GGTGGGTCAAGGGCAAGGAACAATGGAGGAAATGTACAAGGATGATACTAGAAGAGGATGTCCAACCAAGCTGGGGTGCAGTGGAGGAGATGGCAGCAATGTGGCTGCGGTTCCTCATCTTCGCCGCCGGCAGGTCCAATGGTAAGGTGCACGCGGCGGAGCTGGCCAGCGGAGGGGAGCTCATCACCTTCGCCTGGCTGCTCATGGCCCGGGAAGGGCTCGGCGAATCCGAGAGGAGAAGGGTCCGGCTGACGTCCACCATATCGTCCATTTCGTCTGCTGATTCTGCTGGTGCTGCAGCTGATTTGAAGGAAGCATATGCGTTCTTTTTCAACTGATTAAAGTTTGAAAGTTTGATTAGTACTTTAGCTGATTTGAGTAGCTTTGTTTGTTGTTCCCTACATCTTTATAATCTAAAGCTATGTATGAAGTAGAGTTAGGATTAATAACCAGCAATCTTCCTGTGATAAGAGATAATGCATGGCTGATATGATTTGGGCTTTCTATAGCTGCCAGCCCCTATATATATCCCGAGATTTTCTCCTTCCTTTTCTCTTGACTGTAACCGTATCTGTG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||