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Oryza sativa
cluster # 8346 cluster # 8346       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8346#0 length = 854 sequences # 5  
consensusID : consensus_8346#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 854
fasta sequence 
                              [ATCGGAAGCAAATCATCTTCCTAGTGCATACAAGTTAGCTCATCATCAGCACTAGTACAGTACTACTAGACAGTTGTACGTACAAGTAGAAGTAGCTACCCAA-CCTTGGGAGAGATGGAGATTCCAGTGATTGATCTCAAGGGGCTCGCCGGCGG-CGACG-AAGAAAGGGAGCGCACCATGGCCCAGCTCCACGAGGCCTGTAAGGACTGGGGCTTCTTCTGGGTGGAAAACCATGGCGTGGAGGCGGCGTTAATGGAGGAGGTGAAGAGCTTCGTGTACCGCCATTACGACGAGCACCT-GGAGAAGAAATTCTACGCCTCCGACCTCGCCAAGAACCTCCACCTGAACAAGGACGACGGCGACGTCCTCGTCGACGGCGGCGACC--TCGCCGACCA-GGCCGAC-TGGGAGGCCACCTAC-TTCATCCAGC-ACCGCCCCAAGAACACCGCCGCCGACTTCCCGGACAT-CCCGCCGGCGGCGAGGGAGTCCCTGGACGCGTACATCGCGCAGGCGGTGTCCCTCGCCGAGCTGCTCGCCGGCTGCATCAGCACCAACCTGGGC-CTCGCCGGCGCCGCCGGCGTCGTGGACGCCTTCGCGCCGCCGTTCGTCGGCACCAAGTTCGCCATGTACCCACCGTGCCCGCGCCCGGACCTCGTCTGGGGCCTCCGCGCCCACACCGACGCCGGCGGCATCATCCTGCTCCTCCAGGACGACGCCGTCGGCGGGCTCGAGTTCCA-CCGCGGCGGCCGCGAGTGGGTCCCCGTCGGCCCGACCCGGCGCGGCCGGCTGTTCGTCAACATCGGCGACCAGGTGGAGGTGCTCAGCGGCGGCGCCTACAAGAGCGTCGTGCACCGCGT]

[+] EMBL AK102472             [ATCGGAAGCAAATCATCTTCCTAGTGCATACAAGTTAGCTCATCATCAGCACTAGTACAGTACTACTAGACAGTTGTACGTAC AGTAGAAGTAGCTACCCAA CCTTGGGAGAGATGGAGATTCCAGTGATTGATCTCAAGGGGCTCGCCGGCGG CGACG AAGAAAGGGAGCGCACCATGGCCCAGCTCCACGAGGCCTGTAAGGACTGGGGCTTCTTCTGGGTGGAAAACCATGGCGTGGAGGCGGCGTTAATGGAGGAGGTGAAGAGCTTCGTGTACCGCCATTACGACGAGCACCT GGAGAAGAAATTCTACGCCTCCGACCTCGCCAAGAACCTCCACCTGAACAAGGACGACGGCGACGTCCTCGTCGACGGCGGCGACC  TCGCCGACCA GGCCGAC TGGGAGGCCACCTAC TTCATCCAGC ACCGCCCCAAGAACACCGCCGCCGACTTCCCGGACAT CCCGCCGGCGGCGAGGGAGTCCCTGGACGCGTACATCGCGCAGGCGGTGTCCCTCGCCGAGCTGCTCGCCGGCTGCATCAGCACCAACCTGGGC CTCGCCGGCGCCGCCGGCGTCGTGGACGCCTTCGCGCCGCCGTTCGTCGGCACCAAGTTCGCCATGTACCCACCGTGCCCGCGCCCGGACCTCGTCTGGGGCCTCCGCGCCCACACCGACGCCGGCGGCATCATCCTGCTCCTCCAGGACGACGCCGTCGGCGGGCTCGAGTTCCA CCGCGGCGGCCGCGAGTGGGTCCCCGTCGGCCCGACCCGGCGCGGCCGGCTGTTCGTCAACATCGGCGACCAGGTGGAGGTGCTCAGCGGCGGCGCCTACAAGAGCGTCGTGCACCGCGT]
[+] EMBL OS1321788            [          AATCATCTTCCTAGTGCATACAAGTTAGCTCATCATCAGCACTAGTACAGTACTACTAGACAGTTGTACGTACAAGTAGAAGTAGCTACCCAA CCTTGGGAGAGATGGAGATTCCAGTGATTGATCTCAAGGGGCTCGCCGGCGGNCG  N AAGAAAGGGAGCGCACCATGGCCCAGCTCCACGAGGCCTGTAAGGACTGGGGCTTCTTCTGGGTGGAAAACCATGGCGTGGAGGCGGCGTTAATGGAGGAGGTGAAGAGCTTCGTGTACCGCCATTACGACGAGCACCTGGGAGAAGAAATTCTACGNCTCCGACCTCGCCAAGAACCTCCACCTGAACAAGGACGACGGCGACGTCCTCGTCGACGGCNGCGACCCTTCGCNACCCAGGGCCGACTTGGGANGCCACCTACTTTCATCCAGCAACNGCCCCAAGAACAacc                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C27913               [                         GCATACAAGTTAGCTCATCATCAGCACTAGTACAGTACTACTAGACAGTTGTACGTACAAGTAGAAGTAGCTACCCAA CCTTGGGAGANATGGAGATTCCAGTGATTGATCTCAAGGGGCTCGCCGGCGG  NACGNAAGAAAGGGAGCGCACCATGGCCCAGCTCCACGAGGCCTGTAAGGACTGGGGCTTCTTCTGGGTGGAAAACCATGGCGTGGAGGCGGCGTTAATGGAGGAGGTGAAGAGCTTCGTGTACCGCCATTACGACGAGCACCT TGGGGAGGAATTNTACGCCTCCGACCTTGCCAAGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BI805731             [                             ACAAGTTAGCTCATCATCACCACTAGTACAGTACTACTAGACAGTTGTACGTACAAGTAGAAGTAGCTACCCAACCCTTGGGAGAGATGGAGATTCCAGTGATTGATCTCAAGGGGCTCGCC GCGG CGACG AAGAAAGGGAGCGCACCATGGCCCAGCTCCACGAGGCCTGTAAGGACTGGGGCTTCTTCTGGGTGGAAAACCATGGCGTGGAGGCGGCGTTAATGGAGGAGGTGAAGAGCTTCGTGTACCGCCATTACGACGAGCACCT GGAGAAGAAATTCTACGCCTCCGACCTCGCCAAGAACCTCCACCTGAACAAGGACGACGGCGACGTCCTCGTCGACGGCGGCGACC  TCGCCGACCA GGCCGAC TGGGAGGCCACCTAC TTCATCCAGC ACCGCCCCAAGAACACCGCCGCCGACTTCCCGGACAT CCCGCCGGCGGCGAGGGAGTCCCTGGACGCGTACATCGCGCAGGCGGTGTCCCTCGCCGAGCTGCTCGCCGGCTGCATCAGCACCAACCTGGGC CTCGCCGGCGCCGCCGGCGTCGT GACGCCTTCGCGCC CCGTTCGTCGGCACCAAGTTCGCCATGTACCCACCGTGCCCGCGCCCGGACCTCGTCTGGGGCCTCCGCGCCCACACCGACGCC GCGGCATCATCCTGCTCCTCCAGGACGAC CC TC GCGGGCTCGAGTTCCACCCGCGccc                                                                                                                ]
[+] EMBL AU161082             [                                                                                                                                                                                                                                                                                                                                                                                                                          TGGGAGGCCACCTAC TTCATCCAGC ACCGCCCCAAGAACACCGCCGCCGACTTCCCGGANATNCCCGCCGGCGGCGAGGGAGTCCCTGGACGCGTACATCGCGCAGGCGGTGTCCCTCGCCGAGCTGCTCGCCGGCTGCATCAGCACCAACCTGGGCTCTNGCCGGCGCCGCCGGTGTCGTGGACGCCTTCGCGCCGCCGTTCGTCGGCACCAAGTTCGCCATGTACCCACCGTGCCCGCGCCCGGACCTCGTCTGGGGCCTCCGCGCCCACACCGACGCCGGCGGCATCATCCTGCTCCTCCAGGACGACGCCGTCGGCGGGCTCGAG                                                                                                                              ]




>consensus_8346#0
ATCGGAAGCAAATCATCTTCCTAGTGCATACAAGTTAGCTCATCATCAGCACTAGTACAG
TACTACTAGACAGTTGTACGTACAAGTAGAAGTAGCTACCCAACCTTGGGAGAGATGGAG
ATTCCAGTGATTGATCTCAAGGGGCTCGCCGGCGGCGACGAAGAAAGGGAGCGCACCATG
GCCCAGCTCCACGAGGCCTGTAAGGACTGGGGCTTCTTCTGGGTGGAAAACCATGGCGTG
GAGGCGGCGTTAATGGAGGAGGTGAAGAGCTTCGTGTACCGCCATTACGACGAGCACCTG
GAGAAGAAATTCTACGCCTCCGACCTCGCCAAGAACCTCCACCTGAACAAGGACGACGGC
GACGTCCTCGTCGACGGCGGCGACCTCGCCGACCAGGCCGACTGGGAGGCCACCTACTTC
ATCCAGCACCGCCCCAAGAACACCGCCGCCGACTTCCCGGACATCCCGCCGGCGGCGAGG
GAGTCCCTGGACGCGTACATCGCGCAGGCGGTGTCCCTCGCCGAGCTGCTCGCCGGCTGC
ATCAGCACCAACCTGGGCCTCGCCGGCGCCGCCGGCGTCGTGGACGCCTTCGCGCCGCCG
TTCGTCGGCACCAAGTTCGCCATGTACCCACCGTGCCCGCGCCCGGACCTCGTCTGGGGC
CTCCGCGCCCACACCGACGCCGGCGGCATCATCCTGCTCCTCCAGGACGACGCCGTCGGC
GGGCTCGAGTTCCACCGCGGCGGCCGCGAGTGGGTCCCCGTCGGCCCGACCCGGCGCGGC
CGGCTGTTCGTCAACATCGGCGACCAGGTGGAGGTGCTCAGCGGCGGCGCCTACAAGAGC
GTCGTGCACCGCGT

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)