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Oryza sativa
cluster # 8353 cluster # 8353       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8353#0 length = 2282 sequences # 4  
consensus_8353#1 length = 673 sequences # 1  

consensusID : consensus_8353#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2282
fasta sequence
                              [TTGGCGCCTACTCCACCACCGTTTCTCCGCCTCCTTGTCCCACTCACGCGGAGAGGAGAGGAGAAAGCCACGCGACTCGAGGCGACCGTACGGCGGCCGCGACGAGGAGGAGGAGGAGCAAGCCACGCCGAGATTTTGGTGGGGAGGGAAGAGGAGGCGGGCCTCCAATTTCGCCTCCGATTCTGTCTCCGATCGCCGGTCGCGGGAGGAGCGGCGGCGGGGGGAGGGCGGAGAGGTTTGGGGTGGTGGTGGTGATGGAGCCGTACGCGGCGGCGGAGGGGGGAGGAGGAGGAGGAGGTGGAGGCAGCACCGACACCGGGCTCGAAGAGTCGATGTGGAGGATGGGGCTGGGCGGCGGCGGGGGTGGCGGAGGGGAGGCGGTGGCGGCAGGGAGGCTGCCGGAGCGGCCGGGGGAGGCGGACTGCGTCTACTACCTCCGCACGGGGGCTTGCGGCTACGGGGAGAACTGCCGCTACAACCACCCGCGCGATCGCGCCGCCGCAGCAGTGTTAAATGGAGGTGGGAAGACCACACATTCGGCAGAGTATCCAGAACGGCCGGGGCAACCAGTTTGTGAGTACTATATGAAGAATGGAACTTGTAAGTTTGGCTCTAATTGCAAGTATGATCACCCAAGGGAAGGCTCTGTGCAAGCAGTCATGTTAAATTCCAGTGGATACCCTCTACGCTCAGGTGAGAAAGATTGTACCTACTATGTCAAAACTGGCCATTGCAAATTTGGATCTACATGTAAATTCCATCACCCAGAAATTGGTGGAGTTTCAGAGACACCTAACATGTATCCACCAGTTCAGCCTCAGCCTATCTCTTCCTCTCATCCATATCAACATCTTGCTGGCTGGCAAATGGGGAGGCCTCCTGTTTTGCCAGGATCATTTTTATCAGGCTCATATCCACCAATGATGCTTCCGTCCACAGTCGTACCAATGCAGGGATGGAACCCTTACATTTCACCTGTGAACCAAGTTGCGTCAGCTGGGGGGCATCAAACTGTTCAAGCAGGGCCGTTTTATGGCTTATCGCACCAAGGGCCTTCTGCTGCAGTCACTTATGGCAGTCAGTATGCACCGTTATCTTCTTCAACCATGCCTTCAAGTAGCAGTAAACAAGAACCTGCCTTTCCTGCGCGACCTGGGCAACCTGAATGCCAGTATTATCTGAAGACAGGGAGTTGTAAATTTGGATCTGCATGCAAATATCATCATCCTCAGTATTTGAATACACCTAAGTCTAACTGTATGCTGAGTCCTCTTGGTCTTCCTCTTCGGCCGGGTAGCCAACCATGTGCTTACTATACACAGCATGGATTTTGCAAATTTGGTCCGACTTGCAAGTTTGATCACCCAATGGGTACTCTAAGCTATAGCCCTTCAGCGTCATCGATTACTGATTTGCCTATTGCTCCCTATCCCCTCAATTACGCTGTTGCTCCTGTGGCTCCACCTTCATCTTCTTCTGATTTGCGGCCAGAATACCTTCTAACCAAAGAGTTTTCAGCCAACCAGTCAGCGTCACCTGGTACTACATGCGGACCTGCTGGAGCAATGTTAAAAGCGTACGCTCCACACATGCTTATCCGACCTCAAACTTCTGGAGCTGGTGGCATGGTTACAACTCATGGTGGAGAGCTCTAACCACCTTCAGCAAGCTTCTC-GGGACTTTTTTGGCATATGGTGAATGAGATCTCGTCTCCTTTTTTTGCGTCAGTTCGACTTACCCTCTCAGCATCAGTTCACTTGGACCCCCACTCATTGTGAATAAGGCTTCAACTGACTTTGACAAAGGCATGGCCAAGGTGGTAATCTTGCCACCTGAATAAATTCATCATAGATAGATAGGCAGTGGCAAGCTCATTCACTTGCCGTTTATCTCTTCATGTCTGAAATGGAACAGGGGTCATTCTGAAGTCCAGTTAACTGTTTGACTGTCATTGCACTATGATTCAGAGCTTCGAATCCATCTCCTCGGTACATAATTTTATCGGCGGAGCAGGCCGTTGAGTGTGCACCACTGCAGAGAGTTTCATGTCAGAAAGTTATTTGGTTTGGTCGCTCTTGCCCAAATCTCTGTTTATTTTTAATCATCATATATATATGCAATCTCGAGTTCAGCTATATGCATATTCATATATATACTGGGATCAAGAAACTGTAATCACACACTTGGAAACCCTCATCTGAATCGCCCCAAGCTAACTTGCTGCATCATCATTTTGCTCATTTAGTCGATTGCATCCGACTTATGTTTGAACCCTGCAAAAA]

[+] EMBL AK073920             [TTGGCGCCTACTCCACCACCGTTTCTCCGCCTCCTTGTCCCACTCACGCGGAGAGGAGAGGAGAAAGCCACGCGACTCGAGGCGACCGTACGGCGGCCGCGACGAGGAGGAGGAGGAGCAAGCCACGCCGAGATTTTGGTGGGGAGGGAAGAGGAGGCGGGCCTCCAATTTCGCCTCCGATTCTGTCTCCGATCGCCGGTCGCGGGAGGAGCGGCGGCGGGGGGAGGGCGGAGAGGTTTGGGGTGGTGGTGGTGATGGAGCCGTACGCGGCGGCGGAGGGGGGAGGAGGAGGAGGAGGTGGAGGCAGCACCGACACCGGGCTCGAAGAGTCGATGTGGAGGATGGGGCTGGGCGGCGGCGGGGGTGGCGGAGGGGAGGCGGTGGCGGCAGGGAGGCTGCCGGAGCGGCCGGGGGAGGCGGACTGCGTCTACTACCTCCGCACGGGGGCTTGCGGCTACGGGGAGAACTGCCGCTACAACCACCCGCGCGATCGCGCCGCCGCAGCAGTGTTAAATGGAGGTGGGAAGACCACACATTCGGCAGAGTATCCAGAACGGCCGGGGCAACCAGTTTGTGAGTACTATATGAAGAATGGAACTTGTAAGTTTGGCTCTAATTGCAAGTATGATCACCCAAGGGAAGGCTCTGTGCAAGCAGTCATGTTAAATTCCAGTGGATACCCTCTACGCTCAGGTGAGAAAGATTGTACCTACTATGTCAAAACTGGCCATTGCAAATTTGGATCTACATGTAAATTCCATCACCCAGAAATTGGTGGAGTTTCAGAGACACCTAACATGTATCCACCAGTTCAGCCTCAGCCTATCTCTTCCTCTCATCCATATCAACATCTTGCTGGCTGGCAAATGGGGAGGCCTCCTGTTTTGCCAGGATCATTTTTATCAGGCTCATATCCACCAATGATGCTTCCGTCCACAGTCGTACCAATGCAGGGATGGAACCCTTACATTTCACCTGTGAACCAAGTTGCGTCAGCTGGGGGGCATCAAACTGTTCAAGCAGGGCCGTTTTATGGCTTATCGCACCAAGGGCCTTCTGCTGCAGTCACTTATGGCAGTCAGTATGCACCGTTATCTTCTTCAACCATGCCTTCAAGTAGCAGTAAACAAGAACCTGCCTTTCCTGCGCGACCTGGGCAACCTGAATGCCAGTATTATCTGAAGACAGGGAGTTGTAAATTTGGATCTGCATGCAAATATCATCATCCTCAGTATTTGAATACACCTAAGTCTAACTGTATGCTGAGTCCTCTTGGTCTTCCTCTTCGGCCGGGTAGCCAACCATGTGCTTACTATACACAGCATGGATTTTGCAAATTTGGTCCGACTTGCAAGTTTGATCACCCAATGGGTACTCTAAGCTATAGCCCTTCAGCGTCATCGATTACTGATTTGCCTATTGCTCCCTATCCCCTCAATTACGCTGTTGCTCCTGTGGCTCCACCTTCATCTTCTTCTGATTTGCGGCCAGAATACCTTCTAACCAAAGAGTTTTCAGCCAACCAGTCAGCGTCACCTGGTACTACATGCGGACCTGCTGGAGCAATGTTAAAAGCGTACGCTCCACACATGCTTATCCGACCTCAAACTTCTGGAGCTGGTGGCATGGTTACAACTCATGGTGGAGAGCTCTAACCACCTTCAGCAAGCTTCTC GGGACTTTTTTGGCATATGGTGAATGAGATCTCGTCTCCTTTTTTTGCGTCAGTTCGACTTACCCTCTCAGCATCAGTTCACTTGGACCCCCACTCATTGTGAATAAGGCTTCAACTGACTTTGACAAAGGCATGGCCAAGGTGGTAATCTTGCCACCTGAATAAATTCATCATAGATAGATAGGCAGTGGCAAGCTCATTCACTTGCCGTTTATCTCTTCATGTCTGAAATGGAACAGGGGTCATTCTGAAGTCCAGTTAACTGTTTGACTGTCATTGCACTATGATTCAGAGCTTCGAATCCATCTCCTCGGTACATAATTTTATCGGCGGAGCAGGCCGTTGAGTGTGCACCACTGCAGAGAGTTTCATGTCAGAAAGTTATTTGGTTTGGTCGCTCTTGCCCAAATCTCTGTTTATTTTTAATCATCATATATATATGCAATCTCGAGTTCAGCTATATGCATATTCATATATATACTGGGATCAAGAAACTGTAATCACACACTTGGAAACCCTCATCTGAATCGCCCCAAGCTAACTTGCTGCATCATCATTTTGCTCATTTAGTCGATTGCATCCGACTTATGTT               ]
[+] EMBL AU172433             [                                                                                                                                                                                                                                                                                                                           CCGGGCTCGAAGAGTCGATGTGGAGGATGGGGCTGGGCGGCGGCGGGGGTGGCGGAGGGGAGGCGGTGGCGGCAGGGAGGCTGCCGGAGCGGCCGGGGGAGGCGGACTGCGTCTACTACCTCCGCACGGGGGCTTGCGGCTACGGGGAGAACTGCCGNTACAACCACCCGCGCGATCGCGCCGCCGCAGCAGTGTTAAATGGAGGTGGGAAGACCACACATTCGGCAGAGTATCCAGAACGGCCGGGGCAACCAGTTTGTGAGTACTATATGAAGAATGGAACTTGTAAGTTTGGCTCTAATTGCAAGTATGATCACCCAAGGGAAGGCTCTGTGCAAGCAGTCATGTTAAATTCCAGTGGATACCCTCTACGCTCAGGTGAGAAAGATTGTACCTACTATGTCAAAACTGGCCATTGCAAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB638155             [                                                                                                                                                                                                                                                                                                                                                                                  AGGGGAGGCGGTGGCGGCAGGGAGGCTGCCGGAGCGGCCGGGGGAGGCGGACTGCGTCTACTACCTCCGCACGGGGGCTTGCGGCTACGGGGAGAACTGCCGCTACAACCACCCGCGCGATCGCGCCGCCGCAGCAGTGTTAAATGGAGGTGGGAAGACCACACATTCGGCAGAGTATCCAGAACGGCCGGGGCAACCAGTTTGTGAGTACTATATGAAGAATGGAACTTGTAAGTTTGGCTCTAATTGCAAGTATGATCACCCAAGGGAAGGCTCTGTGCAAGCAGTCATGTTAAATTCCAGTGGATACCCTCTACGCTCAGGTGAGAAAGATTGTACCTACTATGTCAAAACTGGCCATTGCAAATTTGGATCTACATGTAAATTCCATCACCCAGAAATTGGTGGAGTTTCAGAGACACCTAACATGTATCCACCAGTTCAGCCTCAGCCTATCTCTTCCTCTCATCCATATCAACATCTTGCTGGCTGGCAAATGGGGAGGCCTCCTGTTTTGCCAGGATCATTTTTATCAGGCTCATATCCACCAATGATGCTTCCGTCCACAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU093364             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            gGGANCTGGTGGCATGGTTACAACTCATGGTGGAGAGCTCTAACCACCTTCAGCAAGCTTCTCGGGGACTTTTTTGGCATATGGTGAATGAGATCTCGTCTCCTTTTTTTGCGTCAGTTCGACTTACCCTCTCAGCATCAGTTCACTTGGACCCCCACTCATTGTGAATAAGGCTTCAACTGACTTTGACAAAGGCATGGCCAAGGTGGTAATCTTGCCACCTGAATAAATTCATCATAGATAGATAGGCAGTGGCAAGCTCATTCACTTGCCGTTTATCTCTTCATGTCTGAAATGGAACAGGGGTCATTCTGAAGTCCAGTTAACTGTTTGACTGTCATTGCACTATGATTCAGAGCTTCGAATCCATCTCCTCGGTACATAATTTTATCGGCGGAGCAGGCCGTTGAGTGTGCACCACTGCAGAGAGTTTCATGTCAGAAAGTTATTTGGTTTGGTCGCTCTTGCCCAAATCTCTGTTTATTTTTAATCATCATATATATATGCAATCTCGAGTTCAGCTATATGCATATTCATATATATACTGGGATCAAGAAACTGTAATCACACACTTGGAAACCCTCATCTGAATCGCCCCAAGCTAACTTGCTGCATCATCATTTTGCTCATTTAGTCGATTGCATCCGACTTATGTTTGAACCCTGCAAAAA]


>consensus_8353#0 TTGGCGCCTACTCCACCACCGTTTCTCCGCCTCCTTGTCCCACTCACGCGGAGAGGAGAG GAGAAAGCCACGCGACTCGAGGCGACCGTACGGCGGCCGCGACGAGGAGGAGGAGGAGCA AGCCACGCCGAGATTTTGGTGGGGAGGGAAGAGGAGGCGGGCCTCCAATTTCGCCTCCGA TTCTGTCTCCGATCGCCGGTCGCGGGAGGAGCGGCGGCGGGGGGAGGGCGGAGAGGTTTG GGGTGGTGGTGGTGATGGAGCCGTACGCGGCGGCGGAGGGGGGAGGAGGAGGAGGAGGTG GAGGCAGCACCGACACCGGGCTCGAAGAGTCGATGTGGAGGATGGGGCTGGGCGGCGGCG GGGGTGGCGGAGGGGAGGCGGTGGCGGCAGGGAGGCTGCCGGAGCGGCCGGGGGAGGCGG ACTGCGTCTACTACCTCCGCACGGGGGCTTGCGGCTACGGGGAGAACTGCCGCTACAACC ACCCGCGCGATCGCGCCGCCGCAGCAGTGTTAAATGGAGGTGGGAAGACCACACATTCGG CAGAGTATCCAGAACGGCCGGGGCAACCAGTTTGTGAGTACTATATGAAGAATGGAACTT GTAAGTTTGGCTCTAATTGCAAGTATGATCACCCAAGGGAAGGCTCTGTGCAAGCAGTCA TGTTAAATTCCAGTGGATACCCTCTACGCTCAGGTGAGAAAGATTGTACCTACTATGTCA AAACTGGCCATTGCAAATTTGGATCTACATGTAAATTCCATCACCCAGAAATTGGTGGAG TTTCAGAGACACCTAACATGTATCCACCAGTTCAGCCTCAGCCTATCTCTTCCTCTCATC CATATCAACATCTTGCTGGCTGGCAAATGGGGAGGCCTCCTGTTTTGCCAGGATCATTTT TATCAGGCTCATATCCACCAATGATGCTTCCGTCCACAGTCGTACCAATGCAGGGATGGA ACCCTTACATTTCACCTGTGAACCAAGTTGCGTCAGCTGGGGGGCATCAAACTGTTCAAG CAGGGCCGTTTTATGGCTTATCGCACCAAGGGCCTTCTGCTGCAGTCACTTATGGCAGTC AGTATGCACCGTTATCTTCTTCAACCATGCCTTCAAGTAGCAGTAAACAAGAACCTGCCT TTCCTGCGCGACCTGGGCAACCTGAATGCCAGTATTATCTGAAGACAGGGAGTTGTAAAT TTGGATCTGCATGCAAATATCATCATCCTCAGTATTTGAATACACCTAAGTCTAACTGTA TGCTGAGTCCTCTTGGTCTTCCTCTTCGGCCGGGTAGCCAACCATGTGCTTACTATACAC AGCATGGATTTTGCAAATTTGGTCCGACTTGCAAGTTTGATCACCCAATGGGTACTCTAA GCTATAGCCCTTCAGCGTCATCGATTACTGATTTGCCTATTGCTCCCTATCCCCTCAATT ACGCTGTTGCTCCTGTGGCTCCACCTTCATCTTCTTCTGATTTGCGGCCAGAATACCTTC TAACCAAAGAGTTTTCAGCCAACCAGTCAGCGTCACCTGGTACTACATGCGGACCTGCTG GAGCAATGTTAAAAGCGTACGCTCCACACATGCTTATCCGACCTCAAACTTCTGGAGCTG GTGGCATGGTTACAACTCATGGTGGAGAGCTCTAACCACCTTCAGCAAGCTTCTCGGGAC TTTTTTGGCATATGGTGAATGAGATCTCGTCTCCTTTTTTTGCGTCAGTTCGACTTACCC TCTCAGCATCAGTTCACTTGGACCCCCACTCATTGTGAATAAGGCTTCAACTGACTTTGA CAAAGGCATGGCCAAGGTGGTAATCTTGCCACCTGAATAAATTCATCATAGATAGATAGG CAGTGGCAAGCTCATTCACTTGCCGTTTATCTCTTCATGTCTGAAATGGAACAGGGGTCA TTCTGAAGTCCAGTTAACTGTTTGACTGTCATTGCACTATGATTCAGAGCTTCGAATCCA TCTCCTCGGTACATAATTTTATCGGCGGAGCAGGCCGTTGAGTGTGCACCACTGCAGAGA GTTTCATGTCAGAAAGTTATTTGGTTTGGTCGCTCTTGCCCAAATCTCTGTTTATTTTTA ATCATCATATATATATGCAATCTCGAGTTCAGCTATATGCATATTCATATATATACTGGG ATCAAGAAACTGTAATCACACACTTGGAAACCCTCATCTGAATCGCCCCAAGCTAACTTG CTGCATCATCATTTTGCTCATTTAGTCGATTGCATCCGACTTATGTTTGAACCCTGCAAA AA



consensusID : consensus_8353#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 673
fasta sequence
                              [TCTTTTTTTTGCGATTTGCGATATATTTTCCTGGAACTACCTGTAGCATTTCGTTGTCTCTTTAAGCGATGACAGTCGAAATAGAATCTAGTGTGACTGAGTTCCTTCTGATAAAAATATGGACATTAATACCATGTCTTACGAACACAAGCTATTCTTGTATATGGATGATACATTACACTTCTATTTGTTTCTGTTTGCACTTGTTCAATTATTCATATGAAGTTTTCCTTGATTTGCAGGGTAGCCAACCATGTGCTTACTATACACAGCATGGATTTTGCAAATTTGGTCCGACTTGCAAGTTTGATCACCCAATGGGTACTCTAAGCTATAGCCCTTCAGCGTCATCGATTACTGATTTGCCTATTGCTCCCTATCCCCTCAATTACGCTGTTGCTCCTGTGGCTCCACCTTCATCTTCTTCTGATTTGCGGCCAGAATACCTTCTAACCAAAGAGTTTTCAGCCAACCAGTCAGCGTCACCTGGTACTACGTGCGGACCTGCTGGAGCAATGTTAAAAGCGTACGCTCCACACATGCTTATCCGACCTCANACTTCTGGAGCTGGTGGCATGGTTACAACTCATGGTGGAGAGCTCTAACCACCTTCAGCAAGCTTCTCGGGACTTTTTTGGCATATGGTGAATGAGATCTCGTCTCCTTTTTTTTG]

[+] EMBL CA763131             [TCTTTTTTTTGCGATTTGCGATATATTTTCCTGGAACTACCTGTAGCATTTCGTTGTCTCTTTAAGCGATGACAGTCGAAATAGAATCTAGTGTGACTGAGTTCCTTCTGATAAAAATATGGACATTAATACCATGTCTTACGAACACAAGCTATTCTTGTATATGGATGATACATTACACTTCTATTTGTTTCTGTTTGCACTTGTTCAATTATTCATATGAAGTTTTCCTTGATTTGCAGGGTAGCCAACCATGTGCTTACTATACACAGCATGGATTTTGCAAATTTGGTCCGACTTGCAAGTTTGATCACCCAATGGGTACTCTAAGCTATAGCCCTTCAGCGTCATCGATTACTGATTTGCCTATTGCTCCCTATCCCCTCAATTACGCTGTTGCTCCTGTGGCTCCACCTTCATCTTCTTCTGATTTGCGGCCAGAATACCTTCTAACCAAAGAGTTTTCAGCCAACCAGTCAGCGTCACCTGGTACTACGTGCGGACCTGCTGGAGCAATGTTAAAAGCGTACGCTCCACACATGCTTATCCGACCTCANACTTCTGGAGCTGGTGGCATGGTTACAACTCATGGTGGAGAGCTCTAACCACCTTCAGCAAGCTTCTCGGGACTTTTTTGGCATATGGTGAATGAGATCTCGTCTCCTTTTTTTTG]


>consensus_8353#1 TCTTTTTTTTGCGATTTGCGATATATTTTCCTGGAACTACCTGTAGCATTTCGTTGTCTC TTTAAGCGATGACAGTCGAAATAGAATCTAGTGTGACTGAGTTCCTTCTGATAAAAATAT GGACATTAATACCATGTCTTACGAACACAAGCTATTCTTGTATATGGATGATACATTACA CTTCTATTTGTTTCTGTTTGCACTTGTTCAATTATTCATATGAAGTTTTCCTTGATTTGC AGGGTAGCCAACCATGTGCTTACTATACACAGCATGGATTTTGCAAATTTGGTCCGACTT GCAAGTTTGATCACCCAATGGGTACTCTAAGCTATAGCCCTTCAGCGTCATCGATTACTG ATTTGCCTATTGCTCCCTATCCCCTCAATTACGCTGTTGCTCCTGTGGCTCCACCTTCAT CTTCTTCTGATTTGCGGCCAGAATACCTTCTAACCAAAGAGTTTTCAGCCAACCAGTCAG CGTCACCTGGTACTACGTGCGGACCTGCTGGAGCAATGTTAAAAGCGTACGCTCCACACA TGCTTATCCGACCTCANACTTCTGGAGCTGGTGGCATGGTTACAACTCATGGTGGAGAGC TCTAACCACCTTCAGCAAGCTTCTCGGGACTTTTTTGGCATATGGTGAATGAGATCTCGT CTCCTTTTTTTTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8353#0      TTGGCGCCTACTCCACCACCGTTTCTCCGCCTCCTTGTCCCACTCACGCGGAGAGGAGAG 60
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      GAGAAAGCCACGCGACTCGAGGCGACCGTACGGCGGCCGCGACGAGGAGGAGGAGGAGCA 120
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      AGCCACGCCGAGATTTTGGTGGGGAGGGAAGAGGAGGCGGGCCTCCAATTTCGCCTCCGA 180
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      TTCTGTCTCCGATCGCCGGTCGCGGGAGGAGCGGCGGCGGGGGGAGGGCGGAGAGGTTTG 240
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      GGGTGGTGGTGGTGATGGAGCCGTACGCGGCGGCGGAGGGGGGAGGAGGAGGAGGAGGTG 300
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      GAGGCAGCACCGACACCGGGCTCGAAGAGTCGATGTGGAGGATGGGGCTGGGCGGCGGCG 360
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      GGGGTGGCGGAGGGGAGGCGGTGGCGGCAGGGAGGCTGCCGGAGCGGCCGGGGGAGGCGG 420
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      ACTGCGTCTACTACCTCCGCACGGGGGCTTGCGGCTACGGGGAGAACTGCCGCTACAACC 480
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      ACCCGCGCGATCGCGCCGCCGCAGCAGTGTTAAATGGAGGTGGGAAGACCACACATTCGG 540
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      CAGAGTATCCAGAACGGCCGGGGCAACCAGTTTGTGAGTACTATATGAAGAATGGAACTT 600
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      GTAAGTTTGGCTCTAATTGCAAGTATGATCACCCAAGGGAAGGCTCTGTGCAAGCAGTCA 660
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      TGTTAAATTCCAGTGGATACCCTCTACGCTCAGGTGAGAAAGATTGTACCTACTATGTCA 720
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      AAACTGGCCATTGCAAATTTGGATCTACATGTAAATTCCATCACCCAGAAATTGGTGGAG 780
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      TTTCAGAGACACCTAACATGTATCCACCAGTTCAGCCTCAGCCTATCTCTTCCTCTCATC 840
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      CATATCAACATCTTGCTGGCTGGCAAATGGGGAGGCCTCCTGTTTTGCCAGGATCATTTT 900
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      TATCAGGCTCATATCCACCAATGATGCTTCCGTCCACAGTCGTACCAATGCAGGGATGGA 960
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      ACCCTTACATTTCACCTGTGAACCAAGTTGCGTCAGCTGGGGGGCATCAAACTGTTCAAG 1020
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      CAGGGCCGTTTTATGGCTTATCGCACCAAGGGCCTTCTGCTGCAGTCACTTATGGCAGTC 1080
consensus_8353#1      -----TCTTTTTTTTGCGATTTGCGATATA----TTTTCCTGGAACTACCTGTAGCATTT 51
                            * **** * **   * **   *      ** * *** *   ** * * *** * 

consensus_8353#0      AGTATGCACCGTTATCTTCTTCAACCATGCC--TTCAAGTAGCAGTAAACAAGAACCTGC 1138
consensus_8353#1      ---------CGTTGTCTCTTTAAGCGATGACAGTCGAAATAGAATCTAGTGTGACTGAGT 102
                               **** ***  ** * * *** *  *  ** *** *   *    **    * 

consensus_8353#0      CTTTCCTGCGCGACCTGGGCAACCTGAATGCCAGTATTATCTGAAGACAGGGAGTTGTAA 1198
consensus_8353#1      TCCTTCTGATAAAAATATG-GACATTAATACCA-TGTCTTACGAACACAAGCTATT---- 156
                         * ***    *  *  *  ** * *** *** * *  *  *** *** *   **    

consensus_8353#0      ATTTGGATCTGCATGCAAATATCATCATCCTCAGTATTTGAATACACCTAAGTCTAACTG 1258
consensus_8353#1      -CTTGTATATGGATG-ATACATTACACTTCTATTTGTTTCTGTTTGCACTTGTTCAATTA 214
                        *** ** ** *** * * ** *   * **   * ***   *   *    **  ** * 

consensus_8353#0      T--ATGCTGAGTCCTCTTGGTCTTCCTCTTCGGCCGGGTAGCCAACCATGTGCTTACTAT 1316
consensus_8353#1      TTCATATGAAGTTTTCCTTGATTT--------GCAGGGTAGCCAACCATGTGCTTACTAT 266
                      *  **    ***  ** * *  **        ** *************************

consensus_8353#0      ACACAGCATGGATTTTGCAAATTTGGTCCGACTTGCAAGTTTGATCACCCAATGGGTACT 1376
consensus_8353#1      ACACAGCATGGATTTTGCAAATTTGGTCCGACTTGCAAGTTTGATCACCCAATGGGTACT 326
                      ************************************************************

consensus_8353#0      CTAAGCTATAGCCCTTCAGCGTCATCGATTACTGATTTGCCTATTGCTCCCTATCCCCTC 1436
consensus_8353#1      CTAAGCTATAGCCCTTCAGCGTCATCGATTACTGATTTGCCTATTGCTCCCTATCCCCTC 386
                      ************************************************************

consensus_8353#0      AATTACGCTGTTGCTCCTGTGGCTCCACCTTCATCTTCTTCTGATTTGCGGCCAGAATAC 1496
consensus_8353#1      AATTACGCTGTTGCTCCTGTGGCTCCACCTTCATCTTCTTCTGATTTGCGGCCAGAATAC 446
                      ************************************************************

consensus_8353#0      CTTCTAACCAAAGAGTTTTCAGCCAACCAGTCAGCGTCACCTGGTACTACATGCGGACCT 1556
consensus_8353#1      CTTCTAACCAAAGAGTTTTCAGCCAACCAGTCAGCGTCACCTGGTACTACGTGCGGACCT 506
                      ************************************************** *********

consensus_8353#0      GCTGGAGCAATGTTAAAAGCGTACGCTCCACACATGCTTATCCGACCTCAAACTTCTGGA 1616
consensus_8353#1      GCTGGAGCAATGTTAAAAGCGTACGCTCCACACATGCTTATCCGACCTCANACTTCTGGA 566
                      ************************************************** *********

consensus_8353#0      GCTGGTGGCATGGTTACAACTCATGGTGGAGAGCTCTAACCACCTTCAGCAAGCTTCTCG 1676
consensus_8353#1      GCTGGTGGCATGGTTACAACTCATGGTGGAGAGCTCTAACCACCTTCAGCAAGCTTCTCG 626
                      ************************************************************

consensus_8353#0      GGACTTTTTTGGCATATGGTGAATGAGATCTCGTCTCCTTTTTTTGCGTCAGTTCGACTT 1736
consensus_8353#1      GGACTTTTTTGGCATATGGTGAATGAGATCTCGTCTCCTTTTTTTTG------------- 673
                      *********************************************               

consensus_8353#0      ACCCTCTCAGCATCAGTTCACTTGGACCCCCACTCATTGTGAATAAGGCTTCAACTGACT 1796
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      TTGACAAAGGCATGGCCAAGGTGGTAATCTTGCCACCTGAATAAATTCATCATAGATAGA 1856
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      TAGGCAGTGGCAAGCTCATTCACTTGCCGTTTATCTCTTCATGTCTGAAATGGAACAGGG 1916
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      GTCATTCTGAAGTCCAGTTAACTGTTTGACTGTCATTGCACTATGATTCAGAGCTTCGAA 1976
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      TCCATCTCCTCGGTACATAATTTTATCGGCGGAGCAGGCCGTTGAGTGTGCACCACTGCA 2036
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      GAGAGTTTCATGTCAGAAAGTTATTTGGTTTGGTCGCTCTTGCCCAAATCTCTGTTTATT 2096
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      TTTAATCATCATATATATATGCAATCTCGAGTTCAGCTATATGCATATTCATATATATAC 2156
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      TGGGATCAAGAAACTGTAATCACACACTTGGAAACCCTCATCTGAATCGCCCCAAGCTAA 2216
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      CTTGCTGCATCATCATTTTGCTCATTTAGTCGATTGCATCCGACTTATGTTTGAACCCTG 2276
consensus_8353#1      ------------------------------------------------------------
                                                                                  

consensus_8353#0      CAAAAA 2282
consensus_8353#1      ------
                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)