cluster # 8384

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Oryza sativa
cluster # 8384 cluster # 8384 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8384#0 length = 1466 sequences # 5
consensusID : consensus_8384#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1466
fasta sequence
                              [TGTTCAAGTCCCCTCCTCTTCTTTCTTCTCTCCTCTGCTTCCTCCTGAAGCGGATGACGTCAGCAATGGCGATGAGCTTCCTCTCCACCACCGCCGCCTCCTCCTCCCAGCCACCCCTACCCGCCCGCCGCCTCCCTCGCCGCAATCCCTCCCTCCCCTTCCCTCTCAGACCACCACACCGCCTCTCTCCCTTCTCCGCTCCCCCTCCCGAGCCCCATCGCCTCACCTACCGAACCCACTCCACCTCCTCCTCTTCCAGGACACCCACCGCCGCCGGCCTCCTCTCTCCGGTCATCTCCACCTCGAGAACCCTCATCTTCCTCCTTGTCGCCTCCCTCCTCTCCCTCTCCGGCGTCCGCCCCCTCCCTTCCCTCGCATCCCCTCCCCCACCTACCCAACAACCGCAAGAAACGGAAGAGCAAGAACAGCAGCAAGAATCCGAGGAGAAGCAGCAGCAGCAGCAGGAGGAGGAGGGCGTGGAGGCGGAGGTCGAGGAGGCGTGGCTGCGGCAAGACGAGGAGGAAGAAGTAGAAGAGAAAGAAGAGGAGGAGGAGGAGGCCGATGACGAGGTGCAGATGTACATGGAGATCCTGAGCCGCGATCCGGGCGACGTGGACGCGCTCAAGTGCGCGCTGTTCGCCAAGATGAGGCGCGCGGAGTGGGGCGGCGCGCTGGGGTTCGCGCGGCGGCTGCGGGAGGCGGAGCCCGGCGAGGTGGAGTGGCGGCTCATGGAGGCGCTGCTGCACGAGCTCAAAGGCGACCTCGCCGAGGCCGAGCGCCTCTTCAACGAGGTCCTCGCCGAGAAGCCACTCCTCGTCAGGGCACTCCATGGACTTGCTCTGTGTATGCATAAAAGATCAGAAGGACCTACTGTTTTTGAGATGCTGGAGAAAGCTTTGCAACTTGCAATTTCTGGGGAAAGGGTTCCAGAAGAGCGCAACATTAAGCTTTTGATTGCTCAGATGCATGTTGTCAAGGGCCAGTTGGATG-TTGCATCAGAGAAACTGCAAAATCTTATCAATGAGGATCCTCGAGATTTCCGACCTCATC-TTTGCCA-GGGCATCGTTTACGCAC-TTTTAGAC-AAAAAGGAAG-AAGCAGATG-AGCTGTTTGATACATATAGAAGTCTTGTTCCAGATGAA-TTTCCAGA-CAAG-AGTTTTATTAGTGATGTTATACAAGCAGCCAGAGTGGAGTCCAAGGACCGGCTACAAAAGGATTTTGGATCTGAATTTTTATCTAAGAAGTGACTAATCAGGATTTTTCTACACCTGAACGGCTAATAGTTTTTGTAGTGGTAGGTAGCTGCATATTGATGTGCACACAAGTGCAAAAATGTTACAAGTGAATTGAAATAAATAGTGAGAAATGGAAGGAGATGTGTATCTCCTACCACCAATTTTCTCCTAACATTGAAATAAAATAGAGATAAATGGAGATGTGTTTCTCCCATTACCAATAAAAAAAAAAAA]

[+] EMBL AK071095             [TGTTCAAGTCCCCTCCTCTTCTTTCTTCTCTCCTCTGCTTCCTCCTGAAGCGGATGACGTCAGCAATGGCGATGAGCTTCCTCTCCACCACCGCCGCCTCCTCCTCCCAGCCACCCCTACCCGCCCGCCGCCTCCCTCGCCGCAATCCCTCCCTCCCCTTCCCTCTCAGACCACCACACCGCCTCTCTCCCTTCTCCGCTCCCCCTCCCGAGCCCCATCGCCTCACCTACCGAACCCACTCCACCTCCTCCTCTTCCAGGACACCCACCGCCGCCGGCCTCCTCTCTCCGGTCATCTCCACCTCGAGAACCCTCATCTTCCTCCTTGTCGCCTCCCTCCTCTCCCTCTCCGGCGTCCGCCCCCTCCCTTCCCTCGCATCCCCTCCCCCACCTACCCAACAACCGCAAGAAACGGAAGAGCAAGAACAGCAGCAAGAATCCGAGGAGAAGCAGCAGCAGCAGCAGGAGGAGGAGGGCGTGGAGGCGGAGGTCGAGGAGGCGTGGCTGCGGCAAGACGAGGAGGAAGAAGTAGAAGAGAAAGAAGAGGAGGAGGAGGAGGCCGATGACGAGGTGCAGATGTACATGGAGATCCTGAGCCGCGATCCGGGCGACGTGGACGCGCTCAAGTGCGCGCTGTTCGCCAAGATGAGGCGCGCGGAGTGGGGCGGCGCGCTGGGGTTCGCGCGGCGGCTGCGGGAGGCGGAGCCCGGCGAGGTGGAGTGGCGGCTCATGGAGGCGCTGCTGCACGAGCTCAAAGGCGACCTCGCCGAGGCCGAGCGCCTCTTCAACGAGGTCCTCGCCGAGAAGCCACTCCTCGTCAGGGCACTCCATGGACTTGCTCTGTGTATGCATAAAAGATCAGAAGGACCTACTGTTTTTGAGATGCTGGAGAAAGCTTTGCAACTTGCAATTTCTGGGGAAAGGGTTCCAGAAGAGCGCAACATTAAGCTTTTGATTGCTCAGATGCATGTTGTCAAGGGCCAGTTGGATG TTGCATCAGAGAAACTGCAAAATCTTATCAATGAGGATCCTCGAGATTTCCGACCTCATC TTTGCCA GGGCATCGTTTACGCAC TTTTAGAC AAAAAGGAAG AAGCAGATG AGCTGTTTGATACATATAGAAGTCTTGTTCCAGATGAA TTTCCAGA CAAG AGTTTTATTAGTGATGTTATACAAGCAGCCAGAGTGGAGTCCAAGGACCGGCTACAAAAGGATTTTGGATCTGAATTTTTATCTAAGAAGTGACTAATCAGGATTTTTCTACACCTGAACGGCTAATAGTTTTTGTAGTGGTAGGTAGCTGCATATTGATGTGCACACAAGTGCAAAAATGTTACAAGTGAATTGAAATAAATAGTGAGAAATGGAAGGAGATGTGTATCTCCTACCACCAATTTTCTCCTAACATTGAAATAAAATAGAGATAAATGGAGATGTGTTTC                         ]
[+] EMBL AK106020             [          CCCTCCTCTTCTTTCTTCTCTCCTCTGCTTCCTCCTGAAGCGGATGACGTCAGCAATGGCGATGAGCTTCCTCTCCACCACCGCCGCCTCCTCCTCCCAGCCACCCCTACCCGCCCGCCGCCTCCCTCGCCGCAATCCCTCCCTCCCCTTCCCTCTCAGACCACCACACCGCCTCTCTCCCTTCTCCGCTCCCCCTCCCGAGCCCCATCGCCTCACCTACCGAACCCACTCCACCTCCTCCTCTTCCAGGACACCCACCGCCGCCGGCCTCCTCTCTCCGGTCATCTCCACCTCGAGAACCCTCATCTTCCTCCTTGTCGCCTCCCTCCTCTCCCTCTCCGGCGTCCGCCCCCTCCCTTCCCTCGCATCCCCTCCCCCACCTACCCAACAACCGCAAGAAACGGAAGAGCAAGAACAGCAGCAAGAATCCGAGGAGAAGCAGCAGCAGCAGCAGGAGGAGGAGGGCGTGGAGGCGGAGGTCGAGGAGGCGTGGCTGCGGCAAGACGAGGAGGAAGAAGTAGAAGAGAAAGAAGAGGAGGAGGAGGAGGCCGATGACGAGGTGCAGATGTACATGGAGATCCTGAGCCGCGATCCGGGCGACGTGGACGCGCTCAAGTGCGCGCTGTTCGCCAAGATGAGGCGCGCGGAGTGGGGCGGCGCGCTGGGGTTCGCGCGGCGGCTGCGGGAGGCGGAGCCCGGCGAGGTGGAGTGGCGGCTCATGGAGGCGCTGCTGCACGAGCTCAAAGGCGACCTCGCCGAGGCCGAGCGCCTCTTCAACGAGGTCCTCGCCGAGAAGCCACTCCTCGTCAGGGCACTCCATGGACTTGCTCTGTGTATGCATAAAAGATCAGAAGGACCTACTGTTTTTGAGATGCTGGAGAAAGCTTTGCAACTTGCAATTTCTGGGGAAAGGGTTCCAGAAGAGCGCAACATTAAGCTTTTGATTGCTCAGATGCATGTTGTCAAGGGCCAGTTGGATG TTGCATCAGAGAAACTGCAAAATCTTATCAATGAGGATCCTCGAGATTTCCGACCTCATC TTTGCCA GGGCATCGTTTACGCAC TTTTAGAC AAAAAGGAAG AAGCAGATG AGCTGTTTGATACATATAGAAGTCTTGTTCCAGATGAA TTTCCAGA CAAG AGTTTTATTAGTGATGTTATACAAGCAGCCAGAGTGGAGTCCAAGGACCGGCTACAAAAGGATTTTGGATCTGAATTTTTATCTAAGAAGTGACTAATCAGGATTTTTCTACACCTGAACGGCTAATAGTTTTTGTAGTGGTAGGTAGCTGCATATTGATGTGCACACAAGTGCAAAAATGTTACAAGTGAATTGAAATAAATAGTGAGAAATGGAAGGAGATGTGTATCTCCTACCACCAATTTTCTCCTAACATTGAAATAAAATAGAGATAAATGGAGATGTGTTTC                         ]
[+] EMBL AU031603             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCGGCAAGACGAGGAGGAAGAAGTAGAAGAGAAAGAAGAGGAGGAGGAGGAGGCCGATGACGAGGTGCAGATGTACATGGAGATCCTGAGCCGCGATCCGGGCGACGTGGACGCGCTCAAGTGCGCGCTGTTCGCCAAGATGAGGCGCGCGGAGTGGGGCGGCGCGCTGGGGTTCGCGCGGCGGCTGCGGGAGGCGGAG CCGGCGAGGTGGAGTGGCGGCTCATGGAGGCGCTGCTGCACGAGCTCAAAGGCGACCTCGCCGAGGCCGAGCGCCTCTTCAACGAGGTCCTCGCCGAGAAGCCACTCCTCGTCAGGGCACTCCATGGACTTGCTCTGTGTATGCATAAAAGATCAGAAGGACCTACTGTTTTTGAGATGCTGGAGAAAGCTTTGCAACTTGCAATTTCTGGGGAAAGGGTTCCAGAAGAGCGCAACA TAAGCTTTTGATTGCTCAGATGCATGTTGTCAAGGGCCAGTTGGATGTTTGCATCAGAGAAACTGCAAAATCTTATCAATGAGGATCCTCGAGATTTCCGACCTCATCTTTTGCCAGGGGCATCGTTTACGCACTTTTTAGACAAAAAAGGAAGAAAGCAGATGAAGCTGTTTGATACATATAGAAGTCTTGTTCCAGATGAANTTTCCAGACCAAGAAGTTTAATTAGTGATGTTATACAAGCAGC                                                                                                                                                                                                                                                                                              ]
[-] EMBL CA762650             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           gacaaggggGCTCTGTGTATGCATAAAAGATCAGAAGGACCTACTGTTTNTGAGATGCTGGAGAAAGCTTTGCAACTTGCAATTTCTGGGGAAAGGGTTCCAGAAGAGCGCAACATTAAGCTTTTGATTGCTCAGATGCATGTTGTCAAGGGCCAGTTGGATG TTGCATCAGAGAAACTGCAAAATCTTATCAATGAGGATCCTCGAGATTTCCGACCTCATC TTTGCCA GGGCATCGTTTACGCAC TTTTAGAC AAAAAGGAAG AAGCAGATG AGCTGTTTGATACATATAGAAGTCTTGTTCCAGATGAA TTTCCAGA CAAG AGTTTTATTAGTGATGTTATACAAGCAGCCAGAGTGAAGTCCAAGGACCGGCTACAAAAGGATTTTGGATCTGAATTTTTATCTAAGAAGTGACTAATCAGGATTTTTCTACACCTGAACGGCTAATAGTTTTTGTAGTGGTAGGTAGCTGCATATTGATGTGCACACAAGTGCAAAAATGTTACAAGTGAATTGAAATAAATAGTGAGAAATGGAAGGAGATGTGTATCTCCTACCACCAATTTTCTCCTAACATTGAAATAAAATAGAGATAAATGGAGATGCGTTTCTCCCATTACCAATAAAAAAAAAAAA]
[+] EMBL AU095406             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CATC TTTGCCA GGGCATCGTTTACGCAC TTTTAGAC AAAAAGGAAG AAGCAGATG AGCTGTTTGATACATATAGAAGTCTTGTTCCAGATGAA TTTCCAGA CAAG AGTTTTATTAGTGATGTTATACAAGCAGCCAGAGTGGAGTCCAAGGACCGGCTACAAAAGGATTTTGGATCTGAATTTTTATCTAAGAAGTGACTAATCAGGATTTTTCTACACCTGAACGGCTAATAGTTTTTGTAGTGGTAGGTAGCTGCATATTGATGTGCACACAAGTGCAAAAATGTTACAAGTGAATTGAAATAAATAGTGAGAAATGGAAGGAGATGTGTATCTCCTACCACCAATTTTCTCCTAACATTGAAATAAAATAGAGATAAATGGAGATGTGTTTCTCCCATTAaaaaa            ]




>consensus_8384#0
TGTTCAAGTCCCCTCCTCTTCTTTCTTCTCTCCTCTGCTTCCTCCTGAAGCGGATGACGT
CAGCAATGGCGATGAGCTTCCTCTCCACCACCGCCGCCTCCTCCTCCCAGCCACCCCTAC
CCGCCCGCCGCCTCCCTCGCCGCAATCCCTCCCTCCCCTTCCCTCTCAGACCACCACACC
GCCTCTCTCCCTTCTCCGCTCCCCCTCCCGAGCCCCATCGCCTCACCTACCGAACCCACT
CCACCTCCTCCTCTTCCAGGACACCCACCGCCGCCGGCCTCCTCTCTCCGGTCATCTCCA
CCTCGAGAACCCTCATCTTCCTCCTTGTCGCCTCCCTCCTCTCCCTCTCCGGCGTCCGCC
CCCTCCCTTCCCTCGCATCCCCTCCCCCACCTACCCAACAACCGCAAGAAACGGAAGAGC
AAGAACAGCAGCAAGAATCCGAGGAGAAGCAGCAGCAGCAGCAGGAGGAGGAGGGCGTGG
AGGCGGAGGTCGAGGAGGCGTGGCTGCGGCAAGACGAGGAGGAAGAAGTAGAAGAGAAAG
AAGAGGAGGAGGAGGAGGCCGATGACGAGGTGCAGATGTACATGGAGATCCTGAGCCGCG
ATCCGGGCGACGTGGACGCGCTCAAGTGCGCGCTGTTCGCCAAGATGAGGCGCGCGGAGT
GGGGCGGCGCGCTGGGGTTCGCGCGGCGGCTGCGGGAGGCGGAGCCCGGCGAGGTGGAGT
GGCGGCTCATGGAGGCGCTGCTGCACGAGCTCAAAGGCGACCTCGCCGAGGCCGAGCGCC
TCTTCAACGAGGTCCTCGCCGAGAAGCCACTCCTCGTCAGGGCACTCCATGGACTTGCTC
TGTGTATGCATAAAAGATCAGAAGGACCTACTGTTTTTGAGATGCTGGAGAAAGCTTTGC
AACTTGCAATTTCTGGGGAAAGGGTTCCAGAAGAGCGCAACATTAAGCTTTTGATTGCTC
AGATGCATGTTGTCAAGGGCCAGTTGGATGTTGCATCAGAGAAACTGCAAAATCTTATCA
ATGAGGATCCTCGAGATTTCCGACCTCATCTTTGCCAGGGCATCGTTTACGCACTTTTAG
ACAAAAAGGAAGAAGCAGATGAGCTGTTTGATACATATAGAAGTCTTGTTCCAGATGAAT
TTCCAGACAAGAGTTTTATTAGTGATGTTATACAAGCAGCCAGAGTGGAGTCCAAGGACC
GGCTACAAAAGGATTTTGGATCTGAATTTTTATCTAAGAAGTGACTAATCAGGATTTTTC
TACACCTGAACGGCTAATAGTTTTTGTAGTGGTAGGTAGCTGCATATTGATGTGCACACA
AGTGCAAAAATGTTACAAGTGAATTGAAATAAATAGTGAGAAATGGAAGGAGATGTGTAT
CTCCTACCACCAATTTTCTCCTAACATTGAAATAAAATAGAGATAAATGGAGATGTGTTT
CTCCCATTACCAATAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case