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Oryza sativa
cluster # 8419 cluster # 8419       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8419#0 length = 1338 sequences # 3  
consensus_8419#1 length = 852 sequences # 1  
consensus_8419#2 length = 690 sequences # 1  

consensusID : consensus_8419#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1338
fasta sequence
                              [CACCGCCTCTTACTCGCTCTTTCTCCTCCTCCTCCCCGCCTCCTCTCCGCTTTCTCCTCCTCGCACCGCTCCTCTCCGCCTTCTTCTCGCGTCGCGCCGCCGCCTTCCTCGCACCGTGCCTCTCCGTCTTCTCCTCGCGCCGTGCCGCCTTCTCCTCCTCGCGCCATGTCGCCACCCTCTACCCACACATCTGCGCGCCCACGACCTGACTCCTGAGGCCTCGATGACGGAAGGCTAATGGGAGACACAAGATGGATGGGATCTGGACCGTGGAGTGGTTGAGATCGACGGGATCAATGGCTGGATTGATTTGCTTGATTTGATTTTTTTTCCATGAATCATGCTCTAC-TTGCTACTTGTTGTGGCATCATCAAATTTTAGTCCTTCATCCCAGTTGCTTTTTCATTCATCATGTACAGAGTTCTTTTTTTGCAATTATTTTTTGGGCTGAGTTCGGTCTTTGACCGAGACCAAACCGAATTAACCGAAGACCGAAATACTCTATCTTGAGTTTTCTTGAAGACCGATCAGTCTTGTGATCGTAAAGACCGAATTTTTCAAAAGACTGAAGAACCTAACCGAAATTTTCGGTTAGACCGAATGCCCACCCCTACCTCCCCCTCTGGTCGACCTCCCCCATGCCTGCCCTACTGCAGACCTGGGAAGAAGAAGAAGGGAAGGAGAAGAAAGGGAAAGAAGGAAGCGGAGGGAATCGAGGTGAAGATGGAAATGAAGGGTTTGATTACCGCTGCCCATGGAGGCTTTCCCCCTGTTTTGGTTTTCTATTAGGGTTTAGATCAAGTGTTGGAAGCGAGTAAGTTTGGGATCCACCGATTTATTCCTCAGCCAGGTTTTCGCTGATCTGCCCCCTGCGCAGTTCTGTTTTGGATGCCTTTTCGGCCAAGATAATAGGATTTCCTTCGAAAAGTCTCTATACAAAAGTTGTAAATAACGTGTAGATCTATCTTCTGACCGAATGGCATGATTTTATATCAAGTGGTTTAGGAGGTATCAATTTCTGAAGTTGGCTGTCTGAATGTCGATGCATTTATCTGTAGTCGAGGTTCAGAGGGA-TTTTAGAGGATCTTAATGATGGAATCCGAGAATCTTGTATTTACAGAAGTTGTAGCATATGTTGTGATCTACCTCCTACATAAAAATTGTTAGCTTTTATCTTGTAGTTTGTTGTCAGTGCTCTTTTGAATGGTTGTTGCACAGTTTTCTGGGCAGATGCACTTTTCTGTTTTGTGCCATGTTTTAGGCCAGCTAAATGGAAGAATTCAGTTTTGTTATCTAAATGAAAGTTATAACTCTTGTTCTGTAGATGTCAGAAATGAT]

[+] EMBL AK104983             [CACCGCCTCTTACTCGCTCTTTCTCCTCCTCCTCCCCGCCTCCTCTCCGCTTTCTCCTCCTCGCACCGCTCCTCTCCGCCTTCTTCTCGCGTCGCGCCGCCGCCTTCCTCGCACCGTGCCTCTCCGTCTTCTCCTCGCGCCGTGCCGCCTTCTCCTCCTCGCGCCATGTCGCCACCCTCTACCCACACATCTGCGCGCCCACGACCTGACTCCTGAGGCCTCGATGACGGAAGGCTAATGGGAGACACAAGATGGATGGGATCTGGACCGTGGAGTGGTTGAGATCGACGGGATCAATGGCTGGATTGATTTGCTTGATTTGATTTTTTTTCCATGAATCATGCTCTAC TTGCTACTTGTTGTGGCATCATCAAATTTTAGTCCTTCATCCCAGTTGCTTTTTCATTCATCATGTACAGAGTTCTTTTTTTGCAATTATTTTTTGGGCTGAGTTCGGTCTTTGACCGAGACCAAACCGAATTAACCGAAGACCGAAATACTCTATCTTGAGTTTTCTTGAAGACCGATCAGTCTTGTGATCGTAAAGACCGAATTTTTCAAAAGACTGAAGAACCTAACCGAAATTTTCGGTTAGACCGAATGCCCACCCCTACCTCCCCCTCTGGTCGACCTCCCCCATGCCTGCCCTACTGCAGACCTGGGAAGAAGAAGAAGGGAAGGAGAAGAAAGGGAAAGAAGGAAGCGGAGGGAATCGAGGTGAAGATGGAAATGAAGGGTTTGATTACCGCTGCCCATGGAGGCTTTCCCCCTGTTTTGGTTTTCTATTAGGGTTTAGATCAAGTGTTGGAAGCGAGTAAGTTTGGGATCCACCGATTTATTCCTCAGCCAGGTTTTCGCTGATCTGCCCCCTGCGCAGTTCTGTTTTGGATGCCTTTTCGGCCAAGATAATAGGATTTCCTTCGAAAAGTCTCTATACAAAAGTTGTAAATAACGTGTAGATCTATCTTCTGACCGAATGGCATGATTTTATATCAAGTGGTTTAGGAGGTATCAATTTCTGAAGTTGGCTGTCTGAATGTCGATGCATTTATCTGTAGTCGAGGTTCAGAGGGA TTTTAGAGGATCTTAATGATGGAATCCGAGAATCTTGTATTTACAGAAGTTGTAGCATATGTTGTGATCTACCTCCTACATAAAAATTGTTAGCTTTTATCTTGTAGTTTGTTGTCAGTGCTCTTTTGAATGGTTGTTGCACAGTTTTCTGGGCAGATGCACTTTTCTGTTTTGTGCCATGTTTTAGGCCAGCTAAATGGAAGAATTCAGTTTTGTTATCTAAATGAAAGTTATAACT                          ]
[+] EMBL AK066882             [   CGCCTCTTACTCGCTCTTTCTCCTCCTCCTCCCCGCCTCCTCTCCGCTTTCTCCTCCTCGCACCGCTCCTCTCCGCCTTCTTCTCGCGTCGCGCCGCCGCCTTCCTCGCACCGTGCCTCTCCGTCTTCTCCTCGCGCCGTGCCGCCTTCTCCTCCTCGCGCCATGTCGCCACCCTCTACCCACACATCTGCGCGCCCACGACCTGACTCCTGAGGCCTCGATGACGGAAGGCTAATGGGAGACACAAGATGGATGGGATCTGGACCGTGGAGTGGTTGAGATCGACGGGATCAATGGCTGGATTGATTTGCTTGATTTGATTTTTTTTCCATGAATCATGCTCTAC TTGCTACTTGTTGTGGCATCATCAAATTTTAGTCCTTCATCCCAGTTGCTTTTTCATTCATCATGTACAGAGTTCTTTTTTTGCAATTATTTTTTGGGCTGAGTTCGGTCTTTGACCGAGACCAAACCGAATTAACCGAAGACCGAAATACTCTATCTTGAGTTTTCTTGAAGACCGATCAGTCTTGTGATCGTAAAGACCGAATTTTTCAAAAGACTGAAGAACCTAACCGAAATTTTCGGTTAGACCGAATGCCCACCCCTACCTCCCCCTCTGGTCGACCTCCCCCATGCCTGCCCTACTGCAGACCTGGGAAGAAGAAGAAGGGAAGGAGAAGAAAGGGAAAGAAGGAAGCGGAGGGAATCGAGGTGAAGATGGAAATGAAGGGTTTGATTACCGCTGCCCATGGAGGCTTTCCCCCTGTTTTGGTTTTCTATTAGGGTTTAGATCAAGTGTTGGAAGCGAGTAAGTTTGGGATCCACCGATTTATTCCTCAGCCAGGTTTTCGCTGATCTGCCCCCTGCGCAGTTCTGTTTTGGATGCCTTTTCGGCCAAGATAATAGGATTTCCTTCGAAAAGTCTCTATACAAAAGTTGTAAATAACGTGTAGATCTATCTTCTGACCAAATGGCATGATTTTATATCAAGTGGTTTAGGAGGTATCAATTTCTGAAGTTGGCTGTCTGAATGTCGATGCATTTATCTGTAGTCGAGGTTCAGAGGGATTTTTAGAGGATCTTAATGATGGAATCCGAGAATCTTGTATTTACAGAAGTTGTAGCATATGTTGTGATCTACCTCCTACATAAAAATTGTTAGCTTTTATCTTGTAGTTTGTTGTCAGTGCTCTTTTGAATGGTTGTTGCACAGTTTTCTGGGCAGATGCACTTTTCTGTTTTGTGCCATGTTTTAGGCCAGCTAAATGGAAGAATTCAGTTTTGTTATCTAAATGAAAGTTATAACTCTTGTTCTGTAGATGTCAGAAATGAT]
[+] EMBL OSC27401             [       TCTTACTCGCTCTTTCTCCTCCTCCTCCCCGCCTCCTCTCCGCTTTCTCCTCCTCGCACCGNTCCTCTCCGCCTTCTTCTCGCGTCGCGCCGCCGCCTTCCTCGCACCGTGCCTNTCCGTNTTCTCCTCGCGCCGTGCCGCCTTCTNCTNCTCGNGNCATGTCGNCANCCTCTACCAACACATNTGNGCGCNCACGACCTGANTGCTGAGGNCTCGATGACGGAAGGCTAATGGGAGACACAAGATGGATGGGATCTGGACCGTGGNGTGGTTNAGATCGACGGGATCAATGGCTGGATTGATTTGCTTGATTTGATTTTTTTT CATGAATCATGGTCTACTTTGCTACTTGNTGTngna                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]


>consensus_8419#0 CACCGCCTCTTACTCGCTCTTTCTCCTCCTCCTCCCCGCCTCCTCTCCGCTTTCTCCTCC TCGCACCGCTCCTCTCCGCCTTCTTCTCGCGTCGCGCCGCCGCCTTCCTCGCACCGTGCC TCTCCGTCTTCTCCTCGCGCCGTGCCGCCTTCTCCTCCTCGCGCCATGTCGCCACCCTCT ACCCACACATCTGCGCGCCCACGACCTGACTCCTGAGGCCTCGATGACGGAAGGCTAATG GGAGACACAAGATGGATGGGATCTGGACCGTGGAGTGGTTGAGATCGACGGGATCAATGG CTGGATTGATTTGCTTGATTTGATTTTTTTTCCATGAATCATGCTCTACTTGCTACTTGT TGTGGCATCATCAAATTTTAGTCCTTCATCCCAGTTGCTTTTTCATTCATCATGTACAGA GTTCTTTTTTTGCAATTATTTTTTGGGCTGAGTTCGGTCTTTGACCGAGACCAAACCGAA TTAACCGAAGACCGAAATACTCTATCTTGAGTTTTCTTGAAGACCGATCAGTCTTGTGAT CGTAAAGACCGAATTTTTCAAAAGACTGAAGAACCTAACCGAAATTTTCGGTTAGACCGA ATGCCCACCCCTACCTCCCCCTCTGGTCGACCTCCCCCATGCCTGCCCTACTGCAGACCT GGGAAGAAGAAGAAGGGAAGGAGAAGAAAGGGAAAGAAGGAAGCGGAGGGAATCGAGGTG AAGATGGAAATGAAGGGTTTGATTACCGCTGCCCATGGAGGCTTTCCCCCTGTTTTGGTT TTCTATTAGGGTTTAGATCAAGTGTTGGAAGCGAGTAAGTTTGGGATCCACCGATTTATT CCTCAGCCAGGTTTTCGCTGATCTGCCCCCTGCGCAGTTCTGTTTTGGATGCCTTTTCGG CCAAGATAATAGGATTTCCTTCGAAAAGTCTCTATACAAAAGTTGTAAATAACGTGTAGA TCTATCTTCTGACCGAATGGCATGATTTTATATCAAGTGGTTTAGGAGGTATCAATTTCT GAAGTTGGCTGTCTGAATGTCGATGCATTTATCTGTAGTCGAGGTTCAGAGGGATTTTAG AGGATCTTAATGATGGAATCCGAGAATCTTGTATTTACAGAAGTTGTAGCATATGTTGTG ATCTACCTCCTACATAAAAATTGTTAGCTTTTATCTTGTAGTTTGTTGTCAGTGCTCTTT TGAATGGTTGTTGCACAGTTTTCTGGGCAGATGCACTTTTCTGTTTTGTGCCATGTTTTA GGCCAGCTAAATGGAAGAATTCAGTTTTGTTATCTAAATGAAAGTTATAACTCTTGTTCT GTAGATGTCAGAAATGAT



consensusID : consensus_8419#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 852
fasta sequence
                              [GGGGGGTCTATGTTCTGACCAAATGGCATGAGTTTATTTCAAGTGGTTTAGGAGGTATCAATTTCTGAAGTTGGCTGTCTGAATATCGATGCATTTTTCTGTAGTCGAGGTTCATAGGGTTTTTAGAGGATCTTAATGATGGAATCAGAGAATCTTGTATTTACAAAAGTTGTAGCATATGTTGTGATCTACCTCTTATATAAAAATTGTTAGCTTTTATCTTGTTGTTTATTGTCAGAGCNNTTTTGAATGGTTATNNCNCAGTTTTCTGGGCAGATGCAGTTCTCTGTTTTGTGCCGTGTTTTAGGCCAGATAAANGGAAGAATTCAATTTTGTTATCTAAATGAAATTTGTAACTCTTGTTCTGTAGATGTAAAAAATGATATATTTTGCTGTGTTATGTGATGTAGAATTGGAGATATCAATTGTTAATCTATGCTGCTTTTATAGGAAGATTATCGGTAATTTGCTTTATGTTGTATGGGGTGGGTTCCCAGCGTAGAAAGTGAATGTGTGATTCTTGAATGATTATATGTGTTGNTTGAGGCTAAGTCGGTGNTTATTCAAGTGATGCCACTTCGGAATGCAACTAGAATTCATCTCGCCATCGGTGAANGCAAGTAAACGTAGCGGTGGTTTGCTACAGCTTTGACTTGGTATTTGATTCTACCTNCNCGNTGAAATTATNTATCATCAACCAAGATTATTATATGGTACACATAGGATTTACCTATCTGNATCAAACCTATTGATTTTACAANGGTTATGGGTATACCTTATGCNCTTGGGTATAAAANCCTATATTGGANCCCATCGAAGGAAGGGATTNCCANGTTTACTCTGGGGGTCATA]

[+] EMBL CA766458             [GGGGGGTCTATGTTCTGACCAAATGGCATGAGTTTATTTCAAGTGGTTTAGGAGGTATCAATTTCTGAAGTTGGCTGTCTGAATATCGATGCATTTTTCTGTAGTCGAGGTTCATAGGGTTTTTAGAGGATCTTAATGATGGAATCAGAGAATCTTGTATTTACAAAAGTTGTAGCATATGTTGTGATCTACCTCTTATATAAAAATTGTTAGCTTTTATCTTGTTGTTTATTGTCAGAGCNNTTTTGAATGGTTATNNCNCAGTTTTCTGGGCAGATGCAGTTCTCTGTTTTGTGCCGTGTTTTAGGCCAGATAAANGGAAGAATTCAATTTTGTTATCTAAATGAAATTTGTAACTCTTGTTCTGTAGATGTAAAAAATGATATATTTTGCTGTGTTATGTGATGTAGAATTGGAGATATCAATTGTTAATCTATGCTGCTTTTATAGGAAGATTATCGGTAATTTGCTTTATGTTGTATGGGGTGGGTTCCCAGCGTAGAAAGTGAATGTGTGATTCTTGAATGATTATATGTGTTGNTTGAGGCTAAGTCGGTGNTTATTCAAGTGATGCCACTTCGGAATGCAACTAGAATTCATCTCGCCATCGGTGAANGCAAGTAAACGTAGCGGTGGTTTGCTACAGCTTTGACTTGGTATTTGATTCTACCTNCNCGNTGAAATTATNTATCATCAACCAAGATTATTATATGGTACACATAGGATTTACCTATCTGNATCAAACCTATTGATTTTACAANGGTTATGGGTATACCTTATGCNCTTGGGTATAAAANCCTATATTGGANCCCATCGAAGGAAGGGATTNCCANGTTTACTCTGGGGGTCATA]


>consensus_8419#1 GGGGGGTCTATGTTCTGACCAAATGGCATGAGTTTATTTCAAGTGGTTTAGGAGGTATCA ATTTCTGAAGTTGGCTGTCTGAATATCGATGCATTTTTCTGTAGTCGAGGTTCATAGGGT TTTTAGAGGATCTTAATGATGGAATCAGAGAATCTTGTATTTACAAAAGTTGTAGCATAT GTTGTGATCTACCTCTTATATAAAAATTGTTAGCTTTTATCTTGTTGTTTATTGTCAGAG CNNTTTTGAATGGTTATNNCNCAGTTTTCTGGGCAGATGCAGTTCTCTGTTTTGTGCCGT GTTTTAGGCCAGATAAANGGAAGAATTCAATTTTGTTATCTAAATGAAATTTGTAACTCT TGTTCTGTAGATGTAAAAAATGATATATTTTGCTGTGTTATGTGATGTAGAATTGGAGAT ATCAATTGTTAATCTATGCTGCTTTTATAGGAAGATTATCGGTAATTTGCTTTATGTTGT ATGGGGTGGGTTCCCAGCGTAGAAAGTGAATGTGTGATTCTTGAATGATTATATGTGTTG NTTGAGGCTAAGTCGGTGNTTATTCAAGTGATGCCACTTCGGAATGCAACTAGAATTCAT CTCGCCATCGGTGAANGCAAGTAAACGTAGCGGTGGTTTGCTACAGCTTTGACTTGGTAT TTGATTCTACCTNCNCGNTGAAATTATNTATCATCAACCAAGATTATTATATGGTACACA TAGGATTTACCTATCTGNATCAAACCTATTGATTTTACAANGGTTATGGGTATACCTTAT GCNCTTGGGTATAAAANCCTATATTGGANCCCATCGAAGGAAGGGATTNCCANGTTTACT CTGGGGGTCATA



consensusID : consensus_8419#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 690
fasta sequence
                              [GGACGAGACAAGGGGGGCAGACCTGGGAAGAAGGGAAGAAGAAGAAAGGGAAAGAAGGAAGCGGAGGGAATTGAGGTGAAGAAGGAAATGAGGGGTTTTGGTTGCCGCTGCCCATGGAGGCCTAGGTATCTAATACATGATCTTTTCCCCCTGTTTTGGTTTTCTATTAGGGTTTAGATCAAGTGTTGGAAGCGAGTAAGTTTGGGATCAACCGATTTATTCCTCAGCCAGGTTTTTGCTGATCTGTCCCCTGCACAGTTCTGGTTTGGATGCCTTTTCGGCCATCATAATGGGATTTCCTGCGAAACGTCTCTATACAAAAGTTGATAACGTGTAGATCTATCTTCTGACCAAATGGCATGAGTTTATATCAAGTGGTTTAGGAGATATCAATTTCTGAAGTTGACTGTTTGAATATCGATGCATTTTTTCTGTAGTCGAGGTTCAGAGGGATTTTAGAGGATCTTAATGATGGAATCAGAGAATCTTGTTTTTACAGAAGTTGTAGCATATGTTGTGATCTACCTCATACATAAAAATTGTTAGCTTTTATCTTGTAGTTTGTTGTCAGTGCTCTCTTGAATGGTTGTTGCACAGTTTTCTGGGCAGATGCACTTCTCTGTTTTGTGCCATGTTTTAGGCCAGCTAAATGGAAGAATTCAATTTTGTTATCTAAAAAAAAAAAAAAAA]

[-] EMBL CA761890             [GGACGAGACAAGGGGGGCAGACCTGGGAAGAAGGGAAGAAGAAGAAAGGGAAAGAAGGAAGCGGAGGGAATTGAGGTGAAGAAGGAAATGAGGGGTTTTGGTTGCCGCTGCCCATGGAGGCCTAGGTATCTAATACATGATCTTTTCCCCCTGTTTTGGTTTTCTATTAGGGTTTAGATCAAGTGTTGGAAGCGAGTAAGTTTGGGATCAACCGATTTATTCCTCAGCCAGGTTTTTGCTGATCTGTCCCCTGCACAGTTCTGGTTTGGATGCCTTTTCGGCCATCATAATGGGATTTCCTGCGAAACGTCTCTATACAAAAGTTGATAACGTGTAGATCTATCTTCTGACCAAATGGCATGAGTTTATATCAAGTGGTTTAGGAGATATCAATTTCTGAAGTTGACTGTTTGAATATCGATGCATTTTTTCTGTAGTCGAGGTTCAGAGGGATTTTAGAGGATCTTAATGATGGAATCAGAGAATCTTGTTTTTACAGAAGTTGTAGCATATGTTGTGATCTACCTCATACATAAAAATTGTTAGCTTTTATCTTGTAGTTTGTTGTCAGTGCTCTCTTGAATGGTTGTTGCACAGTTTTCTGGGCAGATGCACTTCTCTGTTTTGTGCCATGTTTTAGGCCAGCTAAATGGAAGAATTCAATTTTGTTATCTAAAAAAAAAAAAAAAA]


>consensus_8419#2 GGACGAGACAAGGGGGGCAGACCTGGGAAGAAGGGAAGAAGAAGAAAGGGAAAGAAGGAA GCGGAGGGAATTGAGGTGAAGAAGGAAATGAGGGGTTTTGGTTGCCGCTGCCCATGGAGG CCTAGGTATCTAATACATGATCTTTTCCCCCTGTTTTGGTTTTCTATTAGGGTTTAGATC AAGTGTTGGAAGCGAGTAAGTTTGGGATCAACCGATTTATTCCTCAGCCAGGTTTTTGCT GATCTGTCCCCTGCACAGTTCTGGTTTGGATGCCTTTTCGGCCATCATAATGGGATTTCC TGCGAAACGTCTCTATACAAAAGTTGATAACGTGTAGATCTATCTTCTGACCAAATGGCA TGAGTTTATATCAAGTGGTTTAGGAGATATCAATTTCTGAAGTTGACTGTTTGAATATCG ATGCATTTTTTCTGTAGTCGAGGTTCAGAGGGATTTTAGAGGATCTTAATGATGGAATCA GAGAATCTTGTTTTTACAGAAGTTGTAGCATATGTTGTGATCTACCTCATACATAAAAAT TGTTAGCTTTTATCTTGTAGTTTGTTGTCAGTGCTCTCTTGAATGGTTGTTGCACAGTTT TCTGGGCAGATGCACTTCTCTGTTTTGTGCCATGTTTTAGGCCAGCTAAATGGAAGAATT CAATTTTGTTATCTAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8419#0      CACCGCCTCTTACTCGCTCTTTCTCCTCCTCCTCCCCGCCTCCTCTCCGCTTTCTCCTCC 60
consensus_8419#2      ------------------------------------------------------------
consensus_8419#1      ------------------------------------------------------------
                                                                                  

consensus_8419#0      TCGCACCGCTCCTCTCCGCCTTCTTCTCGCGTCGCGCCGCCGCCTTCCTCGCACCGTGCC 120
consensus_8419#2      ------------------------------------------------------------
consensus_8419#1      ------------------------------------------------------------
                                                                                  

consensus_8419#0      TCTCCGTCTTCTCCTCGCGCCGTGCCGCCTTCTCCTCCTCGCGCCATGTCGCCACCCTCT 180
consensus_8419#2      ------------------------------------------------------------
consensus_8419#1      ------------------------------------------------------------
                                                                                  

consensus_8419#0      ACCCACACATCTGCGCGCCCACGACCTGACTCCTGAGGCCTCGATGACGGAAGGCTAATG 240
consensus_8419#2      ------------------------------------------------------------
consensus_8419#1      ------------------------------------------------------------
                                                                                  

consensus_8419#0      GGAGACACAAGATGGATGGGATCTGGACCGTGGAGTGGTTGAGATCGACGGGATCAATGG 300
consensus_8419#2      ------------------------------------------------------------
consensus_8419#1      ------------------------------------------------------------
                                                                                  

consensus_8419#0      CTGGATTGATTTGCTTGATTTGATTTTTTTTCCATGAATCATGCTCTACTTGCTACTTGT 360
consensus_8419#2      ------------------------------------------------------------
consensus_8419#1      ------------------------------------------------------------
                                                                                  

consensus_8419#0      TGTGGCATCATCAAATTTTAGTCCTTCATCCCAGTTGCTTTTTCATTCATCATGTACAGA 420
consensus_8419#2      ------------------------------------------------------------
consensus_8419#1      ------------------------------------------------------------
                                                                                  

consensus_8419#0      GTTCTTTTTTTGCAATTATTTTTTGGGCTGAGTTCGGTCTTTGACCGAGACCAAACCGAA 480
consensus_8419#2      ------------------------------------------------------------
consensus_8419#1      ------------------------------------------------------------
                                                                                  

consensus_8419#0      TTAACCGAAGACCGAAATACTCTATCTTGAGTTTTCTTGAAGACCGATCAGTCTTGTGAT 540
consensus_8419#2      ------------------------------------------------------------
consensus_8419#1      -----------------------------------------GGGGGGTCTATGTTCTGAC 19
                                                                                  

consensus_8419#0      CGTAAAGACCGAATTT-TTCAAAAGACTGAAGAACCTAACCGAAATTTTCGGTTAGACCG 599
consensus_8419#2      ------------------------------------------------------------
consensus_8419#1      CAAATGGCATGAGTTTATTTCAAGTGGTTTAGGAGGTATC--AATTTCTGAAGTTGGCTG 77
                                                                                  

consensus_8419#0      AATGCCCACCCCTACCTCCCCCTCTGGTCGACCTCCCCCATGCCTGCCCTACTGCAGACC 659
consensus_8419#2      -------------------------------------------GGACGAGACAAGGGGGG 17
consensus_8419#1      TCTGAATATCGATGCATTTTTCTGTAGTCGAGGTTC-----ATAGGGTTTTTAGAGGATC 132
                                                                              *   

consensus_8419#0      TGGGAAGAAGAAGAAGGGAAG---GAGAAGAAAGGGAAAGAAGGAAGCGGAGGGAATCGA 716
consensus_8419#2      CAGACCTGGGAAGAAGGGAAG---AAGAAGAAAGGGAAAGAAGGAAGCGGAGGGAATTGA 74
consensus_8419#1      TTAATGATGGAATCAGAGAATCTTGTATTTACAAAAGTTGTAGCATATGTTGTGATCTAC 192
                               ***  ** ***          * *      * ** *   *  * **     

consensus_8419#0      GGTGAAGATGGAAATGAAGGGTTT-GAT--TACCGCTGCCCATGGAGGC----------- 762
consensus_8419#2      GGTGAAGAAGGAAATGAGGGGTTTTGGT--TGCCGCTGCCCATGGAGGCCTAGGTATCTA 132
consensus_8419#1      CTCTTATATAAAAATTGTTAGCTTTTATCTTGTTGTTTATTGTCAGAGCNNTTTTGAATG 252
                           * *   ****     * **   *  *   * *     *    **           

consensus_8419#0      -----------TTTCCCCCTG----------TTTTGGTTTTCTATTAGGGTTTAGATCAA 801
consensus_8419#2      ATACATGATCTTTTCCCCCTG----------TTTTGGTTTTCTATTAGGGTTTAGATCAA 182
consensus_8419#1      GTTATNNCNCAGTTTTCTGGGCAGATGCAGTTCTCTGTTTTGTGCCGTGTTTTAGGCCAG 312
                                  **  *   *          * *  ***** *     * *****  ** 

consensus_8419#0      GTGT-TGGAAGCGAGTAAGTTTGGGATCCACCGATTTATTCCTCAGCCAGGTTTTCGCTG 860
consensus_8419#2      GTGT-TGGAAGCGAGTAAGTTTGGGATCAACCGATTTATTCCTCAGCCAGGTTTTTGCTG 241
consensus_8419#1      ATAAANGGAAGAATTCAATTTTGTTATCTA--AATGAAATTTGTAACTCTTGTTCTGTAG 370
                       *    *****     ** ****  *** *   **  * *    * *     **  *  *

consensus_8419#0      ATCTGCCCCCTGCGCAGTTCTGTTTTGG-ATGCCTTTTCGGCC--AAGATAATAGGATTT 917
consensus_8419#2      ATCTGTCCCCTGCACAGTTCTGGTTTGG-ATGCCTTTTCGGCC--ATCATAATGGGATTT 298
consensus_8419#1      ATGTAAAAAATGATATATTTTGCTGTGTTATGTGATGTAGAATTGGAGATATCAATTGTT 430
                      ** *      **     ** ** * **  ***   * * *        ***       **

consensus_8419#0      CCTTCGAAAAGTCTCTATACAAAAGTTGTAAATAACGTGTAGATCTATCTTCTGACCGAA 977
consensus_8419#2      CCTGCGAAACGTCTCTATACAAAAGTTG---ATAACGTGTAGATCTATCTTCTGACCAAA 355
consensus_8419#1      AATCTATGCTGCTTTTATAGGAAGATTATCGGTAATTTGC---TTTATGTTGT-ATGGGG 486
                        *       *  * ****  **  **     ***  **    * *** ** * *     

consensus_8419#0      TGGCATGATTTTATATCAAGTGGTTTAGGAGGTATCAATTTCTGAAGTTGGCTGTCTGAA 1037
consensus_8419#2      TGGCATGAGTTTATATCAAGTGGTTTAGGAGATATCAATTTCTGAAGTTGACTGTTTGAA 415
consensus_8419#1      TGGGTTCCCAGCGTAGAAAGTGAATGTGTGATTCTTGAATGATTATATGTGTTGNTTGAG 546
                      ***  *       **  *****  *  *    * *  * *  * *  *    **  *** 

consensus_8419#0      TGTCGAT--GCATTTAT-CT-GTAGTCGAGGTTCAGAGGGATTTTAGAGG--ATCTT--- 1088
consensus_8419#2      TATCGAT--GCATTTTTTCT-GTAGTCGAGGTTCAGAGGGATTTTAGAGG--ATCTT--- 467
consensus_8419#1      GCTAAGTCGGTGNTTATTCAAGTGATGCCACTTCGGAATGCAACTAGAATTCATCTCGCC 606
                        *   *  *   ** * *  **  *     *** **  *    ****    ****    

consensus_8419#0      AATGATGGAATCCGAGAATCTTGT-----ATTTACAGAAGTTGTAGCATATGTTGTGATC 1143
consensus_8419#2      AATGATGGAATCAGAGAATCTTGT-----TTTTACAGAAGTTGTAGCATATGTTGTGATC 522
consensus_8419#1      ATCGGTGAANGCAAGTAAACGTAGCGGTGGTTTGCTACAGCTTTGACTTGGTATTTGATT 666
                      *  * ** *  *    ** * *        *** *   ** * *  * *    * **** 

consensus_8419#0      TACCTCCTACATAAAAATTGTTAGCTTTTATCTTGTAGTTTGTTGT-CAGTGCTCTTTTG 1202
consensus_8419#2      TACCTCATACATAAAAATTGTTAGCTTTTATCTTGTAGTTTGTTGT-CAGTGCTCTCTTG 581
consensus_8419#1      CTACCTNCNCGNTGAAATTATNTATCATCAACCA--AGATTATTATATGGTACACATAGG 724
                         *     *    ***** *      * * *    ** ** ** *   ** * *    *

consensus_8419#0      AATGGTTGTTGCACAGTTTTCTGGGCAGATGCACTTTTCTGTTTTGTGCCATGTTTTAGG 1262
consensus_8419#2      AATGGTTGTTGCACAGTTTTCTGGGCAGATGCACTTCTCTGTTTTGTGCCATGTTTTAGG 641
consensus_8419#1      ATTTACCTATCTGNATCAAACCTATTGATTTTACAAN--GGTTATG-GGTATACCTTATG 781
                      * *      *    *     *        *  **      *** ** *  **   *** *

consensus_8419#0      CCAGCTAAATGGAAGAATTCAGTTTTGTTATC--TAAATGAAAGTTATAACTCTTGTTCT 1320
consensus_8419#2      CCAGCTAAATGGAAGAATTCAATTTTGTTATC--TAAAAAAAAAAAAAAAA--------- 690
consensus_8419#1      CNC-TTGGGTATAAAANCCTATATTGGANCCCATCGAAGGAAGGGATTNCCANGTTTACT 840
                      *    *   *  ** *    *  ** *    *    **  **                  

consensus_8419#0      GTAGATGTCAGAAATGAT 1338
consensus_8419#2      ------------------
consensus_8419#1      CTGGGGGTCATA------ 852
                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)