cluster # 842

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Oryza sativa
cluster # 842 cluster # 842 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_842#0 length = 1677 sequences # 2
consensusID : consensus_842#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1677
fasta sequence
                              [ATGACAACGGGAGCCATCCATGATCCATCCAACTACCCACCAAACAACTCTCGTCGGCTCCACCGGCAGCAGCGAGCGGTAATCACTCGCTCTCACCATGCCGCTCCTCCTCCGCTGCTCGCCGGCGGCGTCACCGCCTCTGCTCCCGCGCCGCCGCAGCGGCTCCCTCCTCTCCGCTGCGCCGCCGGGGCGCCGGCCGCTGCTCCCCGCCGCCGCAGGCCGCGTCGTGCTGGGTTGCGGGCTGGTGACGCTGGACTACCTCGCCACGGTGGACGCGTACCCGCGGCCCGACGACAAGATCCGCAGCGGCGAGCTGCAGGTGTCTGGAGGTGGCAACGCCGGGAACGCGCTGACAGGAGCCGCCCGCCTGGGCCTCAACACGAGGCTCATCTCCAAGGTGGCAAACGATGAAATTGGAGGAACCGTTCTTTCGGAGCTTAAGGAAGCTGGGATTGATATATCTCATGTTATAGTAAGGCTTGGTTTACAAATATATAATTTCTGCATCTTTGTTCATCAAGCGCTGCAATGCAAGTAATCATGTGTACATCGAGAAGGTAGTAAGGTACAATAAATTGGTAACCAAAATGTCAAGGATTAACAAAAGAAAGATGCACAGTGAAAGATATTGGGGTACTATCAATGCACTGGACTTTCTTCCATGTTATCTTATACCTCATTGTTTTGATGATTCTGCTTTGCAGATTTCTGATGGTGGAAACACAACATTTGTATATGTCATTATTGATAAGCAAACAAAAACTCGTACGTGTATAATCACATCAGGGTACCCTCCAATGATACCTAGTGACTTGAGAATGTCAAGTTTGTCAGCTGCACTGCAAGACGTAAGCTTACTATACTTAGATGGATATTCAGATGAGATGGCCTTGGCAGTTGCTAAGCAGAAATGTACAGGCTGATCAGATGAAGATTCCTATTTTGGTTGATGCCGAACCAGAAAGAACAAGGGAAGAATTGGGAGGTTTGCTCAGCCTAGCAAGTTACATAGTCTGTAATGGGAAATTTCCAGAGAAATGGACATC-AGTCCCATCTATTCCCTCTGCACTACTAGAAATCCTTCTGCAATATCCTCGTGCATGCTTCGCAGTTGTAACCCTTGGAGAAAATGGATGCATGATGCTTGAGAGGGGCAAAGATGGTGAAAATTATGAAACTGAGCCAGTAGATATAGAGAATGTCGCTGAGTCCTTAAGGCTGAAAGTAGATAAAGATGATATCCTGCCAACTTGTGTATCATCTAAGTTCATGAGACTTACTGCAAGAGGGTCTGGGAATATATTTGCAAGGCTGCTCATAGGAACAGCAGAAAGTATTCCAGCTTCAGAGCTTGTTGATACAACTGGTTGTGGTGATGCATTCATAGGAGCAGTACTTCATGGACTATCCACAGAGATGCCTCCAGAAAAGATGCTGCCTTTTGCTTGCCAAGTGGCAGGCATCAAATGTAGAGCAATCGGCGCACGATCTGGCCTACCATGGCAATCCGATCCACGCCTGACTAAGTACCTGTGTTAGACCTTGTCGAAATTGCGAGGGACAAAAAAAAGATTGTCATTGAATAAATGATCCATGTTTTTACTTTCAAAAAAAAAAAGATCCCTGCTTCAGGTTTTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAA]

[+] EMBL AK110879             [ATGACAACGGGAGCCATCCATGATCCATCCAACTACCCACCAAACAACTCTCGTCGGCTCCACCGGCAGCAGCGAGCGGTAATCACTCGCTCTCACCATGCCGCTCCTCCTCCGCTGCTCGCCGGCGGCGTCACCGCCTCTGCTCCCGCGCCGCCGCAGCGGCTCCCTCCTCTCCGCTGCGCCGCCGGGGCGCCGGCCGCTGCTCCCCGCCGCCGCAGGCCGCGTCGTGCTGGGTTGCGGGCTGGTGACGCTGGACTACCTCGCCACGGTGGACGCGTACCCGCGGCCCGACGACAAGATCCGCAGCGGCGAGCTGCAGGTGTCTGGAGGTGGCAACGCCGGGAACGCGCTGACAGGAGCCGCCCGCCTGGGCCTCAACACGAGGCTCATCTCCAAGGTGGCAAACGATGAAATTGGAGGAACCGTTCTTTCGGAGCTTAAGGAAGCTGGGATTGATATATCTCATGTTATAGTAAGGCTTGGTTTACAAATATATAATTTCTGCATCTTTGTTCATCAAGCGCTGCAATGCAAGTAATCATGTGTACATCGAGAAGGTAGTAAGGTACAATAAATTGGTAACCAAAATGTCAAGGATTAACAAAAGAAAGATGCACAGTGAAAGATATTGGGGTACTATCAATGCACTGGACTTTCTTCCATGTTATCTTATACCTCATTGTTTTGATGATTCTGCTTTGCAGATTTCTGATGGTGGAAACACAACATTTGTATATGTCATTATTGATAAGCAAACAAAAACTCGTACGTGTATAATCACATCAGGGTACCCTCCAATGATACCTAGTGACTTGAGAATGTCAAGTTTGTCAGCTGCACTGCAAGACGTAAGCTTACTATACTTAGATGGATATTCAGATGAGATGGCCTTGGCAGTTGCTAAGCAGAAATGTACAGGCTGATCAGATGAAGATTCCTATTTTGGTTGATGCCGAACCAGAAAGAACAAGGGAAGAATTGGGAGGTTTGCTCAGCCTAGCAAGTTACATAGTCTGTAATGGGAAATTTCCAGAGAAATGGACATC AGTCCCATCTATTCCCTCTGCACTACTAGAAATCCTTCTGCAATATCCTCGTGCATGCTTCGCAGTTGTAACCCTTGGAGAAAATGGATGCATGATGCTTGAGAGGGGCAAAGATGGTGAAAATTATGAAACTGAGCCAGTAGATATAGAGAATGTCGCTGAGTCCTTAAGGCTGAAAGTAGATAAAGATGATATCCTGCCAACTTGTGTATCATCTAAGTTCATGAGACTTACTGCAAGAGGGTCTGGGAATATATTTGCAAGGCTGCTCATAGGAACAGCAGAAAGTATTCCAGCTTCAGAGCTTGTTGATACAACTGGTTGTGGTGATGCATTCATAGGAGCAGTACTTCATGGACTATCCACAGAGATGCCTCCAGAAAAGATGCTGCCTTTTGCTTGCCAAGTGGCAGGCATCAAATGTAGAGCAATCGGCGCACGATCTGGCCTACCATGGCAATCCGATCCACGCCTGACTAAGTACCTGTGTTAGACCTTGTCGAAATTGCGAGGGACAAAAAAAAGATTGTCATTGAATAAATGATCCATGT                                                                                ]
[-] EMBL CA759021             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTAGCAAGTTACATAGTCTGTAATGGGAAATTTCCAGAGAAATGGGCATCAATTCCCATCT TTCCCTCTGCACTACTAGAAATCCTTTTGCAATATCCTCGTGCATGCTTTGCAGTTGTAACCCTTGGAGAAAATGGATGCCTGATGCTTGAGAGGGGCAAAGATGGTGAAAATTATGAAACTGAGCCCGTAGATATAGAGAATGTCGCCGAGTCCTTAAGGCTGAAAGTAGATAAAGGTGATATCCTGCCAACTTGTGTATCATTTAAGTTCATGAGACTTACTGCCAGAGGGTCTGGGAATATTTTTGCAAGGCTGCTTATAGGAACAGCAGAAAGTTTTCCAGGTTCAGAGCTTGTTGATCCAACTGGTTGTGGTGATGCCTTTATTGGAGCAGTCCTTCATGGGCTATCCCCAGAGATGCCTCCAGAAAAGATGCTGCCTTTTGCTTGCCAAGTGGCAGGCCTCAAATGTAGAGCAATCGGGGCCCGATTTGGCCTACCATGGCAATCCGATCCCCGCCTGACTAAGTACCTGTGTTAGACCTTGTTGAAATTGCGAGGGGCAAAAAAAAGATTGTCCTTGAATTAATGATCCCTGTTTTTACTTTCAAAAAAAAAAAGATCCCTGCTTCAGGTTTTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAA]




>consensus_842#0
ATGACAACGGGAGCCATCCATGATCCATCCAACTACCCACCAAACAACTCTCGTCGGCTC
CACCGGCAGCAGCGAGCGGTAATCACTCGCTCTCACCATGCCGCTCCTCCTCCGCTGCTC
GCCGGCGGCGTCACCGCCTCTGCTCCCGCGCCGCCGCAGCGGCTCCCTCCTCTCCGCTGC
GCCGCCGGGGCGCCGGCCGCTGCTCCCCGCCGCCGCAGGCCGCGTCGTGCTGGGTTGCGG
GCTGGTGACGCTGGACTACCTCGCCACGGTGGACGCGTACCCGCGGCCCGACGACAAGAT
CCGCAGCGGCGAGCTGCAGGTGTCTGGAGGTGGCAACGCCGGGAACGCGCTGACAGGAGC
CGCCCGCCTGGGCCTCAACACGAGGCTCATCTCCAAGGTGGCAAACGATGAAATTGGAGG
AACCGTTCTTTCGGAGCTTAAGGAAGCTGGGATTGATATATCTCATGTTATAGTAAGGCT
TGGTTTACAAATATATAATTTCTGCATCTTTGTTCATCAAGCGCTGCAATGCAAGTAATC
ATGTGTACATCGAGAAGGTAGTAAGGTACAATAAATTGGTAACCAAAATGTCAAGGATTA
ACAAAAGAAAGATGCACAGTGAAAGATATTGGGGTACTATCAATGCACTGGACTTTCTTC
CATGTTATCTTATACCTCATTGTTTTGATGATTCTGCTTTGCAGATTTCTGATGGTGGAA
ACACAACATTTGTATATGTCATTATTGATAAGCAAACAAAAACTCGTACGTGTATAATCA
CATCAGGGTACCCTCCAATGATACCTAGTGACTTGAGAATGTCAAGTTTGTCAGCTGCAC
TGCAAGACGTAAGCTTACTATACTTAGATGGATATTCAGATGAGATGGCCTTGGCAGTTG
CTAAGCAGAAATGTACAGGCTGATCAGATGAAGATTCCTATTTTGGTTGATGCCGAACCA
GAAAGAACAAGGGAAGAATTGGGAGGTTTGCTCAGCCTAGCAAGTTACATAGTCTGTAAT
GGGAAATTTCCAGAGAAATGGACATCAGTCCCATCTATTCCCTCTGCACTACTAGAAATC
CTTCTGCAATATCCTCGTGCATGCTTCGCAGTTGTAACCCTTGGAGAAAATGGATGCATG
ATGCTTGAGAGGGGCAAAGATGGTGAAAATTATGAAACTGAGCCAGTAGATATAGAGAAT
GTCGCTGAGTCCTTAAGGCTGAAAGTAGATAAAGATGATATCCTGCCAACTTGTGTATCA
TCTAAGTTCATGAGACTTACTGCAAGAGGGTCTGGGAATATATTTGCAAGGCTGCTCATA
GGAACAGCAGAAAGTATTCCAGCTTCAGAGCTTGTTGATACAACTGGTTGTGGTGATGCA
TTCATAGGAGCAGTACTTCATGGACTATCCACAGAGATGCCTCCAGAAAAGATGCTGCCT
TTTGCTTGCCAAGTGGCAGGCATCAAATGTAGAGCAATCGGCGCACGATCTGGCCTACCA
TGGCAATCCGATCCACGCCTGACTAAGTACCTGTGTTAGACCTTGTCGAAATTGCGAGGG
ACAAAAAAAAGATTGTCATTGAATAAATGATCCATGTTTTTACTTTCAAAAAAAAAAAGA
TCCCTGCTTCAGGTTTTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAA
clustalw multiple alignements is not computed in this case