These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8424#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1974 fasta sequence [ACGCCCTGCACCCGTTGCCACCACCACCGCCTTCTCCGCCGCGCCGCCTCCTCTCGCGTCTCCCGCTCGTGCAGGGCGCGCGTCGTCGGGCGAGCTGCTGCCGTCTCCGTGGCCGTGGCTGATCAGAACTAGTTGGCGTTCGATCGGAAAGTCGCTGTCTTTTGGCGACTCGGTGAGAATTTGCGCCGCGGTTCAATGTGAAAAATTTTGGCCCGTGGCGAGTTGGATTTGGCGCCGAGTCCATTCAGGTGGTTAAGACTTGTTCGTGGGAGAGCGAAGCTGCGCGCGTTAAGACCGGGCTCCGTTCTTGCATCGTGCAGAGCAGCTGCTGGTTTGAGAATTGAGAGGCGCGGTTGACATGGAGAGTTCCAACCTGGGCGGCGGCGGCGGCGGAGGCGGCGGCGGTGGGCCGCCGCCGTTCTTGATCAAGACGTACGAGATGGTGGAGGACGCGGCGACCAACCACGTCGTGTCGTGGGGCCCCGGCGGCGCCAGCTTCGTCGTGTGGAACCCGCTCGACTTCTCCCGTGACCTGTTGCCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTCATCAGGCAGCTCAACACCTACGGTTTCCGAAAAATCGATCCTGAGAGATGGGAGTTCGCAAACGAGGATTTCATAAGAGGGCACACGCACCTTCTGAAGAACATCCATCGACGCAAGCCCGTGCACAGCCACTCCCTCCAGAACCAGATAAACGGACCACTCGCCGAATCGGAGAGGCGCGAGCTCGAAGAAGAGATCAACCGGCTCAAGTACGAGAAGAGCATCCTCGTCGCGGACCTCCAGAGGCAGAACCAGCAGCAGTACGTGATCAACTGGCAGATGCAGGCGATGGAAGGCAGGCTAGTGGCGATGGAGCAACGGCAGAAGAACATCGTGGCCTCCCTGTGCGAGATGCTGCAGAGACGCGGTGGCGCCGTGTCGAGCTCGCTGCTGGAGTCCGACCATTTCAGCAAGAAGAGGAGGGTCCCGAAGATGGATCTCTTCGTCGACGATTGCGCGGCGGGCGAAGAACAGAAGGTGTTCCAGTTCCAGGGAATTGGGACGGATGCACCGGCCATGCCTCCCGTGCTTCCTGTGACCAATGGTGAGGCTTTTGACAGGGTTGAGCTGAGCCTGGTCTCCCTGGAGAAACTCTTCCAGAGAGCAAATGATGCTTGCACAGCTGCTGAAGAAATGTACTCCCATGGTCATGGTGGTACTGAACCCAGCACTGCTATATGTCCTGAAGAGATGAACACTGCTCCAATGGAGACAGGCATCGATCTTCAGTTACCAGCTAGCCTCCATCCCAGCTCACCCAACACAGGGAATGCCCATCTCCATTTATCCACTGAACTCACAGAGTCTCCAGGTTTTGTGCAGAGTCCAGAGCTGCCAATGGCAGAGATTCGTGAAGATATCCATGTGACAAGATACCCAACACAAGCTGATGTAAATTCTGAGATTGCCTCCTCCACTGATACTTCACAAGATGGCACGTCAGAAACTGAAGCTTCGCATGGACCGACCAACGATGTGTTTTGGGAGCGGTTCCTCACAGAGACTCCACGGTCATGTTTGGATGAGTCAGAAAGACAAGAGTCTCCCAAGGACGATGTAAAAGCAGAATTAGGCTGCAATGGCTTCCATCACCGGGAGAAGGTTGATCAGATCACCGAGCAAATGGGGCACCTTGCTTCAGCCGAGCAGACTCTGCATACCTGATGCAGTAATACCATTTGCGCGGATTCATAGTTCGTGTGTAAATTAGCGAAGATGTAAATTATAGCTTAGATCGGATTAGAGGCTTGCGTGTTACTTTACAGATTTCAACCTTTTATTAGATTACAATAGGTCTTTCACAATTTATGATTCTGTTCTATCCGCTGACTACTGTGCATAAATTTTTTTTAGTAGACCATATCCATTTTTGTACTCCATTGCCCTTCTAAGATTCCTCG] [+] EMBL AK100412 [ACGCCCTGCACCCGTTGCCACCACCACCGCCTTCTCCGCCGCGCCGCCTCCTCTCGCGTCTCCCGCTCGTGCAGGGCGCGCGTCGTCGGGCGAGCTGCTGCCGTCTCCGTGGCCGTGGCTGATCAGAACTAGTTGGCGTTCGATCGGAAAGTCGCTGTCTTTTGGCGACTCGGTGAGAATTTGCGCCGCGGTTCAATGTGAAAAATTTTGGCCCGTGGCGAGTTGGATTTGGCGCCGAGTCCATTCAGGTGGTTAAGACTTGTTCGTGGGAGAGCGAAGCTGCGCGCGTTAAGACCGGGCTCCGTTCTTGCATCGTGCAGAGCAGCTGCTGGTTTGAGAATTGAGAGGCGCGGTTGACATGGAGAGTTCCAACCTGGGCGGCGGCGGCGGCGGAGGCGGCGGCGGTGGGCCGCCGCCGTTCTTGATCAAGACGTACGAGATGGTGGAGGACGCGGCGACCAACCACGTCGTGTCGTGGGGCCCCGGCGGCGCCAGCTTCGTCGTGTGGAACCCGCTCGACTTCTCCCGTGACCTGTTGCCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTCATCAGGCAGCTCAACACCTACGGTTTCCGAAAAATCGATCCTGAGAGATGGGAGTTCGCAAACGAGGATTTCATAAGAGGGCACACGCACCTTCTGAAGAACATCCATCGACGCAAGCCCGTGCACAGCCACTCCCTCCAGAACCAGATAAACGGACCACTCGCCGAATCGGAGAGGCGCGAGCTCGAAGAAGAGATCAACCGGCTCAAGTACGAGAAGAGCATCCTCGTCGCGGACCTCCAGAGGCAGAACCAGCAGCAGTACGTGATCAACTGGCAGATGCAGGCGATGGAAGGCAGGCTAGTGGCGATGGAGCAACGGCAGAAGAACATCGTGGCCTCCCTGTGCGAGATGCTGCAGAGACGCGGTGGCGCCGTGTCGAGCTCGCTGCTGGAGTCCGACCATTTCAGCAAGAAGAGGAGGGTCCCGAAGATGGATCTCTTCGTCGACGATTGCGCGGCGGGCGAAGAACAGAAGGTGTTCCAGTTCCAGGGAATTGGGACGGATGCACCGGCCATGCCTCCCGTGCTTCCTGTGACCAATGGTGAGGCTTTTGACAGGGTTGAGCTGAGCCTGGTCTCCCTGGAGAAACTCTTCCAGAGAGCAAATGATGCTTGCACAGCTGCTGAAGAAATGTACTCCCATGGTCATGGTGGTACTGAACCCAGCACTGCTATATGTCCTGAAGAGATGAACACTGCTCCAATGGAGACAGGCATCGATCTTCAGTTACCAGCTAGCCTCCATCCCAGCTCACCCAACACAGGGAATGCCCATCTCCATTTATCCACTGAACTCACAGAGTCTCCAGGTTTTGTGCAGAGTCCAGAGCTGCCAATGGCAGAGATTCGTGAAGATATCCATGTGACAAGATACCCAACACAAGCTGATGTAAATTCTGAGATTGCCTCCTCCACTGATACTTCACAAGATGGCACGTCAGAAACTGAAGCTTCGCATGGACCGACCAACGATGTGTTTTGGGAGCGGTTCCTCACAGAGACTCCACGGTCATGTTTGGATGAGTCAGAAAGACAAGAGTCTCCCAAGGACGATGTAAAAGCAGAATTAGGCTGCAATGGCTTCCATCACCGGGAGAAGGTTGATCAGATCACCGAGCAAATGGGGCACCTTGCTTCAGCCGAGCAGACTCTGCATACCTGATGCAGTAATACCATTTGCGCGGATTCATAGTTCGTGTGTAAATTAGCGAAGATGTAAATTATAGCTTAGATCGGATTAGAGGCTTGCGTGTTACTTTACAGATTTCAACCTTTTATTAGATTACAATAGGTCTTTCACAATTTATGATTCTGTTCTATCCGCTGACTACTGTGCATAAATTTTTTTTAGTAGACCATATCCATT ] [+] EMBL AB050096 [ CCCGTTGCCACCACCACCGCCTTCTCCGCCGCGCCGCCTCCTCTCGCGTCTCCCGCTCGTGCAGGGCGCGCGTCGTCGGGCGAGCTGCTGCCGTCTCCGTGGCCGTGGCTGATCAGAACTAGTTGGCGTTCGATCGGAAAGTCGCTGTCTTTTGGCGACTCGGTGAGAATTTGCGCCGCGGTTCAATGTGAAAAATTTTGGCCCGTGGCGAGTTGGATTTGGCGCCGAGTCCATTCAGGTGGTTAAGACTTGTTCGTGGGAGAGCGAAGCTGCGCGCGTTAAGACCGGGCTCCGTTCTTGCATCGTGCAGAGCAGCTGCTGGTTTGAGAATTGAGAGGCGCGGTTGACATGGAGAGTTCCAACCTGGGCGGCGGCGGCGGCGGAGGCGGCGGCGGTGGGCCGCCGCCGTTCTTGATCAAGACGTACGAGATGGTGGAGGACGCGGCGACCAACCACGTCGTGTCGTGGGGCCCCGGCGGCGCCAGCTTCGTCGTGTGGAACCCGCTCGACTTCTCCCGTGACCTGTTGCCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTCATCAGGCAGCTCAACACCTACGGTTTCCGAAAAATCGATCCTGAGAGATGGGAGTTCGCAAACGAGGATTTCATAAGAGGGCACACGCACCTTCTGAAGAACATCCATCGACGCAAGCCCGTGCACAGCCACTCCCTCCAGAACCAGATAAACGGACCACTCGCCGAATCGGAGAGGCGCGAGCTCGAAGAAGAGATCAACCGGCTCAAGTACGAGAAGAGCATCCTCGTCGCGGACCTCCAGAGGCAGAACCAGCAGCAGTACGTGATCAACTGGCAGATGCAGGCGATGGAAGGCAGGCTAGTGGCGATGGAGCAACGGCAGAAGAACATCGTGGCCTCCCTGTGCGAGATGCTGCAGAGACGCGGTGGCGCCGTGTCGAGCTCGCTGCTGGAGTCCGACCATTTCAGCAAGAAGAGGAGGGTCCCGAAGATGGATCTCTTCGTCGACGATTGCGCGGCGGGCGAAGAACAGAAGGTGTTCCAGTTCCAGGGAATTGGGACGGATGCACCGGCCATGCCTCCCGTGCTTCCTGTGACCAATGGTGAGGCTTTTGACAGGGTTGAGCTGAGCCTGGTCTCCCTGGAGAAACTCTTCCAGAGAGCAAATGATGCTTGCACAGCTGCTGAAGAAATGTACTCCCATGGTCATGGTGGTACTGAACCCAGCACTGCTATATGTCCTGAAGAGATGAACACTGCTCCAATGGAGACAGGCATCGATCTTCAGTTACCAGCTAGCCTCCATCCCAGCTCACCCAACACAGGGAATGCCCATCTCCATTTATCCACTGAACTCACAGAGTCTCCAGGTTTTGTGCAGAGTCCAGAGCTGCCAATGGCAGAGATTCGTGAAGATATCCATGTGACAAGATACCCAACACAAGCTGATGTAAATTCTGAGATTGCCTCCTCCACTGATACTTCACAAGATGGCACGTCAGAAACTGAAGCTTCGCATGGACCGACCAACGATGTGTTTTGGGAGCGGTTCCTCACAGAGACTCCACGGTCATGTTTGGATGAGTCAGAAAGACAAGAGTCTCCCAAGGACGATGTAAAAGCAGAATTAGGCTGCAATGGCTTCCATCACCGGGAGAAGGTTGATCAGATCACCGAGCAAATGGGGCACCTTGCTTCAGCCGAGCAGACTCTGCATACCTGATGCAGTAATACCATTTGCGCGGATTCATAGTTCGTGTGTAAATTAGCGAAGATGTAAATTATAGCTTAGATCGGATTAGAGGCTTGCGTGTTACTTTACAGATTTCAACCTTTTATTAGATTACAATAGGTCTTTCACAATTTATGATTCTGTTCTATCCGCTGACTACTGTGCATAAATTTTTTTTAGTAGACCATATCCATTTTTGTACTCCATTGCCCTTCTAAGATTCCTCG] [+] EMBL AB050098 [ CCCGTTGCCACCACCACCGCCTTCTCCGCCGCGCCGCCTCCTCTCGCGTCTCCCGCTCGTGCAGGGCGCGCGTCGTCGGGCGAGCTGCTGCCGTCTCCGTGGCCGTGGCTGATCAGAACTAGTTGGCGTTCGATCGGAAAGTCGCTGTCTTTTGGCGACTCGGTGAGAATTTGCGCCGCGGTTCAATGTGAAAAATTTTGGCCCGTGGCGAGTTGGATTTGGCGCCGAGTCCATTCAGGTGGTTAAGACTTGTTCGTGGGAGAGCGAAGCTGCGCGCGTTAAGACCGGGCTCCGTTCTTGCATCGTGCAGAGCAGCTGCTGGTTTGAGAATTGAGAGGCGCGGTTGACATGGAGAGTTCCAACCTGGGCGGCGGCGGCGGCGGAGGCGGCGGCGGTGGGCCGCCGCCGTTCTTGATCAAGACGTACGAGATGGTGGAGGACGCGGCGACCAACCACGTCGTGTCGTGTGGCCCCGGCGGCGCCAGCTTCGTCGTGTGGAACCCGCTCGACTTCTCCCGTGACCTGTTGCCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTCATCAGGCAGCTCAACACCTACGGTTTCCGAAAAATCGATCCTGAGAGATGGGAGTTCGCAAACGAGGATTTCATAAGAGGGCACACGCACCTTCTGAAGAACATCCATCGACGCAAGCCCGTGCACAGCCACTCCCTCCAGAACCAGATAAACGGACCACTCGCCGAATCGGAGAGGCGCGAGCTCGAAGAAGAGATCAACCGGCTCAAGTACGAGAAGAGCATCCTCGTCGCGGACCTCCAGAGGCAGAACCAGCAGCAGTACGTGATCAACTGGCAGATGCAGGCGATGGAAGGCAGGCTAGTGGCGATGGAGCAACGGCAGAAGAACATCGTGGCCTCCCTGTGCGAGATGCTGCAGAGACGCGGTGGCGCCGTGTCGAGCTCGCTGCTGGAGTCCGACCATTTCAGCAAGAAGAGGAGGGTCCCGAAGATGGATCTCTTCGTCGACGATTGCGCGGCGGGCGAAGAACAGAAGGTGTTCCAGTTCCAGGGAATTGGGACGGATGCACCGGCCATGCCTCCCGTGCTTCCTGTGACCAATGGTGAGGCTTTTGACAGGGTTGAGCTGAGCCTGGTCTCCCTGGAGAAACTCTTCCAGAGAGCAAATGATGCTTGCACAGCTGCTGAAGAAATGTACTCCCATGGTCATGGTGGTACTGAACCCAGCACTGCTATATGTCCTGAAGAGATGAACACTGCTCCAATGGAGACAGGCATCGATCTTCAGTTACCAGCTAGCCTCCATCCCAGCTCACCCAACACAGGGAATGCCCATCTCCATTTATCCACTGAACTCACAGAGTCTCCAGGTTTTGTGCAGAGTCCAGAGCTGCCAATGGCAGAGATTCGTGAAGATATCCATGTGACAAGATACCCAACACAAGCTGATGTAAATTCTGAGATTGCCTCCTCCACTGATACTTCACAAGATGGCACGTCAGAAACTGAAGCTTCGCATGGACCGACCAACGATGTGTTTTGGGAGCGGTTCCTCACAGAGACTCCACGGTCATGTTTGGATGAGTCAGAAAGACAAGAGTCTCCCAAGGACGATGTAAAAGCAGAATTAGGCTGCAATGGCTTCCATCACCGGGAGAAGGTTGATCAGATCACCGAGCAAATGGGGCACCTTGCTTCAGCCGAGCAGACTCTGCATACCTGATGCAGTAATACCATTTGCGCGGATTCATAGTTCGTGTGTAAATTAGCGAAGATGTAAATTATAGCTTAGATCGGATTAGAGGCTTGCGTGTTACTTTACAGATTTCAACCTTTTATTAGATTACAATAGGTCTTTCACAATTTATGATTCTGTTCTATCCGCTGACTACTGTGCATAAATTTTTTTTAGTAGACCATATCCATTTTTGTACTCCATTGCCCTTCTAAGATTCCTCG] [+] EMBL AY344492 [ CCGTTCTTGCATCGTGCAGAGCAGCTGCTGGTTTGAGAATTGAGAGGCGCGGTTGACATGGAGAGTTCCAACCTGGGCGGCGGCGGCGGCGGAGGCGGCGGCGGTGGGCCGCCGCCGTTCTTGATCAAGACGTACGAGATGGTGGAGGACGCGGCGACCAACCACGTCGTGTCGTGGGGCCCCGGCGGCGCCAGCTTCGTCGTGTGGAACCCGCTCGACTTCTCCCGTGACCTGTTGCCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTCATCAGGCAGCTCAACACCTACGGTTTCCGAAAAATCGATCCTGAGAGATGGGAGTTCGCAAACGAGGATTTCATAAGAGGGCACACGCACCTTCTGAAGAACATCCATCGACGCAAGCCCGTGCACAGCCACTCCCTCCAGAACCAGATAAACGGACCACTCGCCGAATCGGAGAGGCGCGAGCTCGAAGAAGAGATCAACCGGCTCAAGTACGAGAAGAGCATCCTCGTCGCGGACCTCCAGAGGCAGAACCAGCAGCAGTACGTGATCAACTGGCAGATGCAGGCGATGGAAGGCAGGCTAGTGGCGATGGAGCAACGGCAGAAGAACATCGTGGCCTCCCTGTGCGAGATGCTGCAGAGACGCGGTGGCGCCGTGTCGAGCTCGCTGCTGGAGTCCGACCATTTCAGCAAGAAGAGGAGGGTCCCGAAGATGGATCTCTTCGTCGACGATTGCGCGGCGGGCGAAGAACAGAAGGTGTTCCAGTTCCAGGGAATTGGGACGGATGCACCGGCCATGCCTCCCGTGCTTCCTGTGACCAATGGTGAGGCTTTTGACAGGGTTGAGCTGAGCCTGGTCTCCCTGGAGAAACTCTTCCAGAGAGCAAATGATGCTTGCACAGCTGCTGAAGAAATGTACTCCCATGGTCATGGTGGTACTGAACCCAGCACTGCTATATGTCCTGAAGAGATGAACACTGCTCCAATGGAGACAGGCATCGATCTTCAGTTACCAGCTAGCCTCCATCCCAGCTCACCCAACACAGGGAATGCCCATCTCCATTTATCCACTGAACTCACAGAGTCTCCAGGTTTTGTGCAGAGTCCAGAGCTGCCAATGGCAGAGATTCGTGAAGATATCCATGTGACAAGATACCCAACACAAGCTGATGTAAATTCTGAGATTGCCTCCTCCACTGATACTTCACAAGATGGCACGTCAGAAACTGAAGCTTCGCATGGACCGACCAACGATGTGTTTTGGGAGCGGTTCCTCACAGAGACTCCACGGTCATGTTTGGATGAGTCAGAAAGACAAGAGTCTCCCAAGGACGATGTAAAAGCAGAATTAGGCTGCAATGGCTTCCATCACCGGGAGAAGGTTGATCAGATCACCGAGCAAATGGGGCACCTTGCTTCAGCCGAGCAGACTCTGCATACCTGATGCAGTAATACCATTTGCGCGGATTCATAGTTCGTGTGTAAATTAGCGAAGATGTAAATTATAGCTTAGATCGGATTAGAGGCTTGCGTGTTACTTTACAGATTTCAACCTTTTATTAGATTACAATAGGTCTTTCACAATTTATGATTCTGTTCTATCCGCTGACTACTGTGCATAA ] [+] EMBL BP184454 [ AGTACGAGAAGAGCATCCTCGTCGCGGACCTCCAGAGGCAGAACCAGCAGCAGTACGTGATCAACTGGCAGATGCAGGCGATGGAAGGCAGGCTAGTGGCGATGGAGCAACGGCAGAAGAACATCGTGGCCTCCCTGTGCGAGATGCTGCAGAGACGCGGTGGCGCCGTGTCGAGCTCGCTGCTGGAGTCCGACCATTTCAGCAAGAAGAGGAGGGTCCCGAAGATGGATCTCTTCGTCGACGATTGCGCGGCGGGCGAAGAACAGAAGGTGTTCCAGTTCCAGGGAATTGGGACGGATGCACCGGCCATGCCTCCCGTGCTTCCTGTGACCAATGGTGAGGCTTTTGACAGGGTTGAGCTGAGCCTGGTCTCCCTGGAGAAACTCTTCCAGAGAGCAAATGATGCTTGCACAGCTGCTGAAGAAATGTACTCCCATGGTCATGGTGGTACTGAACCCAGCACTGCTATATGTCCTGAAGAGATGAACACTGCTCCAATGGAGACAGGCATCGATCTTCAGTTACCAGCTAGCCTCCATCCCAGCTCACCCAACACAGGGAATGCCCATCTCCATTTATCCACTGAACTCACAGAGTCTCCAGGTTTTGTGCAGAGTCCAGAGCTGCCAATGGCAGAGATTCGTGAAGATATCCATGTGACAAGATACCCAACACAAGCTGATGTAAATTCTGAGATTGCCTCCTCCACTGATACTTCACAAGATGGCACGTCAGAAACTGAAGCTTCGCATGGACCGACCAACGATGTGTTTTGGGAGCGGTTCCTCACAGAGACTCCACGGTCATGTTTGGATGAGTCAGAAAGACAAGAGTCTCCCAAGGACGATGTAAAAGCAGAATTAGGCTGCAATGGCTTCCATCACCGGGAGAAGGTTGATCAGATCACCGAGCAAATGGGGCACCTTGCTTCAGCCGAGCAGACTCTGCATACCTGATGCAGTAATACCATTTGCGCGGATTCATAGTTCGTGTGTAAATTAGCGAAGATGTAAATTATAGCTTAGATCGGATTAGAGGCTTGCGTGTTACTTTACAGATTTCAACCTTTTATTAGATTACAATAGGTCTTTCACAATTTATGATTCTGTTCTAaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||