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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8455#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1908 fasta sequence
[TGGCTATACTTAATTAAGTACATTGCACAGTGAATTTGTGGTGGATGAACGGCGCCCCACTTTGTGCACGCGGAGCAATGTGGACATATAATGGAATAAAAGGGGTGATGCTAATGAGAAAATTTCTAGTTTAGATGCCACTTACCGAATCAGCTTGTCGACCACATCTTTATTATTATCTTTACACAACACAAACATATTATCACTAGGAATTTGGTGTTGTCCGTGTTACTAATAATATAGTGTACTGTAATATACTGCAGTCTAGGACAAGTTGGTTTCTTGATAAGCATCTAGGACAAGTTCAGAACTTGATCAGGCTTGTCGTTAAGCCAAACTGTAATTCACTTGTGGGTTGTGGCTATGAAGTCTCATTTTGAGCTGAATGTTGGTACATCACTGACATGGCATGCCTTACCTACCTATGGAAAACCAAGATAATCAGAAGGGGACAGGGTACCGGATGGACAACAAAATCTAAGGCCTAATCTCCTATCAATTTTTGTGACCGCCACTCCGTGGTCGGTAGAGGTAACTCCGGCATGGCCGCTTTCGCTAAGCGCCAAAGCTCGGCCTCGGCCGCCATCACCTTTGCCACTTCGACCCAGGTCTTTTGCTGTTGGTTGAAGACCCTGTTGTTCCGCTCCTTCCAAATAGTCCAAGCTATCAAAGCTGCAACGGTGTCGAATCCTCGTCGTTGAGCTTTGGCAACCTTCATTCTCTTGTCACAAAGCCATAAGAGGAAGGAGGGTTCGTTGAATGGCAGTATGTCCGACAAGCCAATTGCTCGGAGTGCGAACCACCACAGTTGACGTGACTCCAGGCATGCGACCAGGAGATGATCAATCGTCTCGTCACCTTGATCACACAGGACGCACCGATCAGGATGTGGTAAACCCCGTCTCCGCAAACGATCGGCTGTCCAACATCTGTTTAGTGCCACTAACCACAGGAAATAGCGGCATCGGGGTGGTGCTAACGACCCTCAGATAGGCTTGTCCTGGAATTGGACCTTCCCCACAAACATGGACTGATAAGCTGAGCGAGCTGGGTATTCTCCTGACGACTCCCATCTCCAGATGATTGAATCCGGCTCTTCCGATAGGGCATCCAAGGATTGCAAAGATGTCCACAAGCTGAGGTACTCTAGGATAGCTTGGATTCCCAAAGCCCCAGATATATCCCGGATCCATGTTCTACCTTGGAGTGCTTCGCGAACCGTCCTACGATTCCGCTTTCTTGCTACGACCGCTGCATGCACAGCCGGCGCAAGGGTGCGGATTGACGACCCTTGGATCCAGTTGTCTTCCCAGAAGAGCACGTTCATTCCATTGCCGACCCGACATGTCAAAGAGACTTGGAGCAGGTTCCTCTCCTTTTGCGAGATTGGAACGTTGAGTCCATGCCATGGCTTTTCCGGCGATGTCCTCAGTTGCCAAGCCCAGCGGCACCGGAGTGCAAGTCCCATGCATTCAAGATCAGGGACACCCAATCCACCATACGATTTGGGTGCACAAACCCGTGCCCAAGCGACCCGGCAGCTTCCACCACTAGCGCTTGCTTTCCCGGACGGGAGGAAGCCGCGACGGACCTTATCGATTCCCTTTATCACCCACTTTGGCACATTGATGGCCATCAGCAGATAGATCGGTATTGAGATTAATACCGCATTTACCATAGTGACTCGACCAATGGGCGCCATCTGCTCTGCCTTCCATACCGGCAACCGACGGGCTATTTCTGTAGTTCCATTGTATGACTGTACCATATCTACTTGTATCTCATTGAACATTGAGGGAAAAATTAAAGTACAAACAAAACAAGGAGGAAATTTTTCATGGTTCCTAAGGCAGCAATGTCAAGCTGGTCCTCTCTGCACATTCCTTCTTGAGAATTGAGATAATTGTT]
[+] EMBL AK064424 [TGGCTATACTTAATTAAGTACATTGCACAGTGAATTTGTGGTGGATGAACGGCGCCCCACTTTGTGCACGCGGAGCAATGTGGACATATAATGGAATAAAAGGGGTGATGCTAATGAGAAAATTTCTAGTTTAGATGCCACTTACCGAATCAGCTTGTCGACCACATCTTTATTATTATCTTTACACAACACAAACATATTATCACTAGGAATTTGGTGTTGTCCGTGTTACTAATAATATAGTGTACTGTAATATACTGCAGTCTAGGACAAGTTGGTTTCTTGATAAGCATCTAGGACAAGTTCAGAACTTGATCAGGCTTGTCGTTAAGCCAAACTGTAATTCACTTGTGGGTTGTGGCTATGAAGTCTCATTTTGAGCTGAATGTTGGTACATCACTGACATGGCATGCCTTACCTACCTATGGAAAACCAAGATAATCAGAAGGGGACAGGGTACCGGATGGACAACAAAATCTAAGGCCTAATCTCCTATCAATTTTTGTGACCGCCACTCCGTGGTCGGTAGAGGTAACTCCGGCATGGCCGCTTTCGCTAAGCGCCAAAGCTCGGCCTCGGCCGCCATCACCTTTGCCACTTCGACCCAGGTCTTTTGCTGTTGGTTGAAGACCCTGTTGTTCCGCTCCTTCCAAATAGTCCAAGCTATCAAAGCTGCAACGGTGTCGAATCCTCGTCGTTGAGCTTTGGCAACCTTCATTCTCTTGTCACAAAGCCATAAGAGGAAGGAGGGTTCGTTGAATGGCAGTATGTCCGACAAGCCAATTGCTCGGAGTGCGAACCACCACAGTTGACGTGACTCCAGGCATGCGACCAGGAGATGATCAATCGTCTCGTCACCTTGATCACACAGGACGCACCGATCAGGATGTGGTAAACCCCGTCTCCGCAAACGATCGGCTGTCCAACATCTGTTTAGTGCCACTAACCACAGGAAATAGCGGCATCGGGGTGGTGCTAACGACCCTCAGATAGGCTTGTCCTGGAATTGGACCTTCCCCACAAACATGGACTGATAAGCTGAGCGAGCTGGGTATTCTCCTGACGACTCCCATCTCCAGATGATTGAATCCGGCTCTTCCGATAGGGCATCCAAGGATTGCAAAGATGTCCACAAGCTGAGGTACTCTAGGATAGCTTGGATTCCCAAAGCCCCAGATATATCCCGGATCCATGTTCTACCTTGGAGTGCTTCGCGAACCGTCCTACGATTCCGCTTTCTTGCTACGACCGCTGCATGCACAGCCGGCGCAAGGGTGCGGATTGACGACCCTTGGATCCAGTTGTCTTCCCAGAAGAGCACGTTCATTCCATTGCCGACCCGACATGTCAAAGAGACTTGGAGCAGGTTCCTCTCCTTTTGCGAGATTGGAACGTTGAGTCCATGCCATGGCTTTTCCGGCGATGTCCTCAGTTGCCAAGCCCAGCGGCACCGGAGTGCAAGTCCCATGCATTCAAGATCAGGGACACCCAATCCACCATACGATTTGGGTGCACAAACCCGTGCCCAAGCGACCCGGCAGCTTCCACCACTAGCGCTTGCTTTCCCGGACGGGAGGAAGCCGCGACGGACCTTATCGATTCCCTTTATCACCCACTTTGGCACATTGATGGCCATCAGCAGATAGATCGGTATTGAGATTAATACCGCATTTACCATAGTGACTCGACCAATGGGCGCCATCTGCTCTGCCTTCCATACCGGCAACCGACGGGCTATTTCTGTAGTTCCATTGTATGACTGTACCATATCTACTTGTATCTCATTGAACATTGAGGGAAAAATTAAAGTACAAACAAAACAAGGAGGAAATTTTTCATGGTTCCTAAGGCAGCAATGTCAAGCTGGTCCTCTCTGCACATTCCTTCTTGAGAATTGAGATAATTGTT]
consensusID : consensus_8455#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1865 fasta sequence
[AGCATCTGCGGCGAGATGGAGAAGGAGGTAGAGGAGGAGGAGGAGGAGGAGGAGGCGGAGGCGAGTAGAAAGAAGGGAGAACGCGGATTAGGGGAGGGGGAATGCGGGGCGCCGAGTAGCAAGAAGAGAGACCCCGAATTGGAGTTGCGCATGAAGCAGAAGACGGCGGAGTGGCACAGGAAGGCGAGGGAGGAGACCCTGAAGGAGATAGCCAAGGAGATGGCCAAGTACCCCAACGAAGACTGGTCCGACACACCGGGCGTCAAGGCTCGCGAGTACCGCGAGGACTGGGAATACCGTTGGTCCGCCATCTTCGGTCCCTACGACACAATCTCGCCTATACCACCCATGCGCTATACACACCGTAAGGACGACTCTATGCCGAGACATATTTCAGTCCGTCACACTCTGCAGATCATCTCGGTCAAAATAAAGGGAATAAGAGGGGGCTTACAGTGGCCGATCAATGTGTTTGGTCTCATTGCTGCGCGCGACACGATTGACCGCAACCGCATTATGATCTTCAACC-GCACCAGGGATAACTGCCAAACAATTACTAAAGAGGATCGATATTTATTACTGACAGGTCCTACGCGTGCTGTTGTGGTATCTGACCCTGTGTATTTTGAGGCCCCGCTGAAAGTGAAGGGCTCTGTCGAATCTGAGGATAAAGATTTAAGCTTTTTAGCTGTCCCGCTCACCGGTGCTTCTGATAGAGGTGAAACGCGCTTGGTTAATAGAGAGTACACTAGCAGGCTTAGCACGCTGGAGTTGACATTTGGCTTTGTTGTTGAGTCCTTGG-AGGCCTCAATCAGTGTGC-GTATCATTGATGGGTCATGGAAAGATGGTTTTCG-TGGTGCATTCACTGCCCATACCCCCAGTC-TAAAAGACAATAAAGTCCTGCTGCTTGATTCTGGATATTGTGAGATGGTGCCTGTTACTGCTGATCGCATGATCAAGCTTTCACGCCATGTTGTTTCCGTGGAAGGTGAGGGAGACCTGACCGTTTCAGTGCTGGCACTTGGAACTGATAATGTGATAGAAGATGAGAAGGATTTCACGCCTAAGGAAGCCGGTATGAGCCAGAGCTCTCTTGACGTGGGCTTTTGTAAATTGGAAGTAACTGTCAACTGGTCACTTCTTTCCTTGCTTCCTGATGGCTATACTTAATTAAGTACATTGCACAGTGGTATGTGAATTGTGATGTTCCTTTGGATCTGTTGCTTCTGAACTTCTGAAATGGGGTGTTGG-TTTTTTTTCTTTTGTTTACTAGCTAGAATAGCGAACTCTTGATGGACGCGGTATCCTGTGTATAGAATGTTGGCAGTATTGCCACCGCTACGGATAAAGTTCGATTTCCTATCTTGATGAGATTTTGTATTTTATGATGCCCCATTTTCTTGGACAGAATTTGTGGTGGATGAACGGCGCCCCACTTTGTGCACGCGGAGCAATGTGGACATATAATGGAATAAAAGGGGTGATGCTAATGAGAAAATTTCTAGTTTAGATGCCACTTACCGAATCAGCTTGTCGACCACATCTTTATTATTATCTTTACACAACACAAACATATTATCACTAGGAATTTGGTGTTGTCCGTGTTACTAATAATATAGTGTACTGTAATATACTGCAGTCTAGGACAAGTTGGTTTCTTGATAAGCATCTAGGACAAGTTCAGGTGAGCTTCTCGACCAGCTCTGTCACTAGGAATGCTTGGCTGCTTGCAATGAAACTTCTATGCATGTACCCAGATATGTGTTGAGGAAGTTGATTGTTGATTACTTTGGTTACAGAACTTGATCAGGCTTGTCGTTAAGCCAAACTGTAATTCACTTGTGGGTTGTGGCTATGAAGTCTCA]
[+] EMBL AK071788 [AGCATCTGCGGCGAGATGGAGAAGGAGGTAGAGGAGGAGGAGGAGGAGGAGGAGGCGGAGGCGAGTAGAAAGAAGGGAGAACGCGGATTAGGGGAGGGGGAATGCGGGGCGCCGAGTAGCAAGAAGAGAGACCCCGAATTGGAGTTGCGCATGAAGCAGAAGACGGCGGAGTGGCACAGGAAGGCGAGGGAGGAGACCCTGAAGGAGATAGCCAAGGAGATGGCCAAGTACCCCAACGAAGACTGGTCCGACACACCGGGCGTCAAGGCTCGCGAGTACCGCGAGGACTGGGAATACCGTTGGTCCGCCATCTTCGGTCCCTACGACACAATCTCGCCTATACCACCCATGCGCTATACACACCGTAAGGACGACTCTATGCCGAGACATATTTCAGTCCGTCACACTCTGCAGATCATCTCGGTCAAAATAAAGGGAATAAGAGGGGGCTTACAGTGGCCGATCAATGTGTTTGGTCTCATTGCTGCGCGCGACACGATTGACCGCAACCGCATTATGATCTTCAACC GCACCAGGGATAACTGCCAAACAATTACTAAAGAGGATCGATATTTATTACTGACAGGTCCTACGCGTGCTGTTGTGGTATCTGACCCTGTGTATTTTGAGGCCCCGCTGAAAGTGAAGGGCTCTGTCGAATCTGAGGATAAAGATTTAAGCTTTTTAGCTGTCCCGCTCACCGGTGCTTCTGATAGAGGTGAAACGCGCTTGGTTAATAGAGAGTACACTAGCAGGCTTAGCACGCTGGAGTTGACATTTGGCTTTGTTGTTGAGTCCTTGG AGGCCTCAATCAGTGTGC GTATCATTGATGGGTCATGGAAAGATGGTTTTCG TGGTGCATTCACTGCCCATACCCCCAGTC TAAAAGACAATAAAGTCCTGCTGCTTGATTCTGGATATTGTGAGATGGTGCCTGTTACTGCTGATCGCATGATCAAGCTTTCACGCCATGTTGTTTCCGTGGAA GTGAGGGAGACCTGACCGTTTCAGTGCTGGCACTTGGAACTGATAATGTGATAGAAGATGAGAAGGATTTCACGCCTAAGGAAGCCGGTATGAGCCAGAGCTCTCTTGACGTGGGCTTTTGTAAATTGGAAGTAACTGTCAACTGGTCACTTCTTTCCTTGCTTCCTGATGGCTATACTTAATTAAGTACATTGCACAGTGGTATGTGAATTGTGATGTTCCTTTGGATCTGTTGCTTCTGAACTTCTGAAATGGGGTGTTGG TTTTTTTTCTTTTGTTTACTAGCTAGAATAGCGAACTCTTGATGGACGCGGTATCCTGTGTATAGAATGTTGGCAGTATTGCC ]
[+] EMBL AK106609 [ GAGAAGGAGGTAGAGGAGGAGGAGGAGGAGGAGGAGGCGGAGGCGAGTAGAAAGAAGGGAGAACGCGGATTAGGGGAGGGGGAATGCGGGGCGCCGAGTAGCAAGAAGAGAGACCCCGAATTGGAGTTGCGCATGAAGCAGAAGGCGGCGGAGTGGCACAGGAAGGCGAGGGAGGAGACCCTGAAGGAGATAGCCAAGGAGATGGCCAAGTACCCCAACGAAGACTGGTCCGACACACCGGGCGTCAAGGCTCGCGAGTACCGCGAGGACTGGGAATACCGTTGGTCCGCCATCTTCGGTCCCTACGACACAATCTCGCCTATACCACCCATGCGCTATACACACCGTAAGGACGACTCTATGCCGAGACATATTTCAGTCCGTCACACTCTGCAGATCATCTCGGTCAAAATAAAGGGAATAAGAGGGGGCTTACAGTGGCCGATCAATGTGTTTGGTCTCATTGCTGCGCGCGACACGATTGACCGCAACCGCATTATGATCTTCAACC GCACCAGGGGTAACTGCCAAACAATTACTAAAGAGGATCGATATTTATTACTGACAGGTCCTACGCGTGCTGTTGTGGTATCTGACCCTGTGTATTTTGAGGCCCCGCTGAAAGTGAAGGGCTCTGTCGAATCTGAGGATAAAGATTTAAGCTTTTTAGCTGTCCCGCTCACCGGTGCTTCTGATAGAGGTGAAACGCGCTTGGTTAATAGAGAGTACACTAGCAGGCTTAGCACGCTGGAGTTGACATTTGGCTTTGTTGTTGAGTCCTTGG AGGCCTCAATCAGTGTGC GTATCATTGATGGGTCATGGAAAGATGGTTTTCG TGGTGCATTCACTGCCCATACCCCCAGTC TAAAAGACAATAAAGTCCTGCTGCTTGATTCTGGATATTGTGAGATGGTGCCTGTTACTGCTGATCGCATGATCAAGCTTTCACGCCATGTTGTTTCCGTGGAAGGTGAGGGAGACCTGACCGTTTCAGTGCTGGCACTTGGAACTGATAATGTGATAGAAGATGAGAAGGATTTCACGCCTAAGGAAGCCGGTATGAGCCAGAGCTCTCTTGACGTGGGCTTTTGTAAATTGGAAGTAACTGTCAACTGGTCACTTCTTTCCTTGCTTCCTGATGGCTATACTTAATTAAGTACATTGCACAGTGGTATGTGAATTGTGATGTTCCTTTGGATCTGTTGCTTCTGAACTTCTGAAATGGGGTGTTGGTTTTTTTTTCTTTTGTTTACTAGCTAGAATAGCGAACTCTTGATGGACGCGGTATCCTGTGTATAGAATGTTGGCAGTATTGCCACCGCTACGGATAAAGTTCGATTTCCTATCTTGATGAGATTTTGTATTTTATGATGCCCCATTTTCTTGGACAGAATTTGTGGTGGATGAACGGCGCCCCACTTTGTGCACGCGGAGCAATGTGGACATATAATGGAATAAAAGGGGTGATGCTAATGAGAAAATTTCTAGTTTAGATGCCACTTACCGAATCAGCTTGTCGACCACATCTTTATTATTATCTTTACACAACACAAACATATTATCACTAGGAATTTGGTGTTGTCCGTGTTACTAATAATATAGTGTACTGTAATATACTGCAGTCTAGGACAAGTTGGTTTCTTGATAAGCATCTAGGACAAGTTCAGGTGAGCTTCTCGACCAGCTCTGTCACTAGGAATGCTTGGCTGCTTGCAATGAAACTTCTATGCATGTACCCAGATATGTGTTGAGGAAGTTGATTGTTGATTACTTTGGTTACAGAACTTGATCAGGCTTGTCGTTAAGCCAAACTGTAATTCACTTGTGGGTTGTGGCTATGAAGTCTCA]
[+] EMBL OSC2651 [ GACACGATTGACCGCAACCGCATTATGATCTTCAACC GCACCAGGGATAACTGCCAAACAATTACTAAAGAGGATCGATATTTATTACTGACAGGTCCTACGCGTGCTGTTGTGGTATCTGACCCTGTGTATTTTGAGGCCCCGCTGAAAGTGAAGGGCTCTGTCGAATCTGAGGATAAAGATTTAAGCTTTTTAGCTGTCCCGCTCACCGGTGCTTCTGATAGAGGTGAAACGCGCTTGGTTAATAGAGAGTACACTAGCAGGCTTAGCACGCTGGAGTTGACATTTGGCTTTGTTGTTGAGTCCTTGGNAGGCCTCAATCAGTGTGCGGTATCATTGATGGGTCATGGAAAGATGGTTTTCGTTGGTGCATTCACTGCCCATACCCCCAGTCTTAAAAGACAgt ]
[+] EMBL AU101358 [ CAACCGCATTATGATCTTCAACCGGCACCAGGNATAACTGCCAACCAATTACTAAAGAGGATCGATATTTATTACTGACAGGTCCTACGCGTGCTGTTGTGGTATCTGACCCTGTGTATTTTGAGGCCCCGCTGAAAGTGAAGGGCTCTGTCGAATCTGAGGATAAAGATTTAAGCTTTTTAGCTGTCCCGCTCACCGGTGCTTCTGATAGAGGTGAAACGCGCTTGGTTAATAGAGAGTACACTAGCAGGCTTAGCACGCTGGAGTTGACATTTGGCTTTGTTGTTGAGTCCTTGG AGGCCTCAATCAGTGTGC GTATCATTGATGGGTCATGGAAAGATGGTTTTCG TGGTGCATTCACTGCCCATACCCCCAGTC TAAAAGACAATAAAGTCCTGCTGCTTGATTCTGGATATTGTGAGATGGTGCCTGTTACTGCTGATCGCATGATCAAGCTTTCACGCCATGTTGTTTCCGTGGAAGGTGAGGGAGACCTGACCGTTTCAGTGCTGGCACTTGGAACTGATAATGTGATAGAAGATGAGAAGGATTTCACGCCTAAGGAAGCCGGTATGAGCCAGAGCTCTCTTGACGTGGGCTTTTGTAAATTGGAAGTAACTGTCAACTGGTCACTTCTTTCCTTGCTTCCTGATGGCTATACTTAATTAAGTACATTGCACAaaaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8455#0 TGGCTATACTTAATTAAGTACATTGCACAGTGAATTTGTGGTG-GATGAAC--GGCGCCC 57
consensus_8455#1 ------------------------------AGCATCTGCGGCGAGATGGAGAAGGAGGTA 30
* ** ** ** * **** * ** *
consensus_8455#0 CACTTTGTGCACGCGGAGCAATGTGGACATATAATGGAATAAAAGGGGTGATGCTAATGA 117
consensus_8455#1 GAGGAGGAGGAGGAGGAGGAGGAGGCGGAGGCGAGTAGAAAGAAGGGAGAACGCGGATTA 90
* * * * * **** * * * * * * ***** * ** ** *
consensus_8455#0 GAAAATTTCTAGTTTAGA-TGCCACTTACCGAATCAGCTTGTCGACCACATCTTTATTAT 176
consensus_8455#1 GGGGAGGGGGAATGCGGGGCGCCGAGTAGCAAGAAGAGAGACC--CCGAATTGGAGTTGC 148
* * * * * *** ** * * * ** ** **
consensus_8455#0 TATCTTTACACAACACAAACATATTATCACTAGGAATTT--GGTGTTGTCCGTGTTACTA 234
consensus_8455#1 GCATGAAGCAGAAGACGG-CGGAGTGGCACAGGAAGGCGAGGGAGGAGACCCTGAAGGAG 207
** ** ** * * * *** * * ** * * ** **
consensus_8455#0 ATAATATAGTGTACTGTAATATACTGCAGTCTAGGACAAGTTGGTTTCTTGATAAGCATC 294
consensus_8455#1 ATAGCCAAGGAGATGGCCAAGTACCCCAA-CGAAGACTGGTCCGACAC--ACCGGGCGTC 264
*** ** * * * *** ** * * *** ** * * ** **
consensus_8455#0 TAGG---ACAAGTTCAGAACTTGATCAGGCTTGTCGTTAAGCCAAACTGTAATTCACTTG 351
consensus_8455#1 AAGGCTCGCGAGTACCGCGAG-GACTGGGAATACCGTTGGTCCG---------CCATCT- 313
*** * *** * * ** ** * **** ** ** *
consensus_8455#0 TGGGTTGTGGCTATGAAGTCTCATTT---TGAGCTGAATGTTG-GTACATCACTGACATG 407
consensus_8455#1 TCGGTCCCTACGACACAATCTCGCCTATACCACCCATGCGCTATACACACCGTAAGGACG 373
* *** * * * **** * * * * * *** * * *
consensus_8455#0 GCATGCCTTACCTACCTATGGAAAACCAAGATAATCAGAAGGGGACAGGGTACCGGATGG 467
consensus_8455#1 ACTCTATGCCGAGACATATTTCAGTCCGTCACACTCTGCAGATCATCTCGGTCAAAATAA 433
* ** *** * ** * * ** * ** * * * **
consensus_8455#0 ACAACAAAATCTAAGGCCTA--ATCTCCTATCAATTTTTGTGACCGCCACTCCGTGGTCG 525
consensus_8455#1 AGGGAATAAGAGGGGGCTTACAGTGGCCGATCAATGTGTTTGGTCTCATTGCTGCGCGCG 493
* * ** *** ** * ** ****** * * ** * * * * * **
consensus_8455#0 GTAGAGGTAACTCCGGCATGGCCGCTTTCGCTAAGCGCCAAAGCTCGGCCTCGGCCGCCA 585
consensus_8455#1 ACACGATTGACCGCAACCGCATTATGATCTTCAACCGCA-----CCAGGGATAACTGCCA 548
* * ** * * ** ** *** * * * ****
consensus_8455#0 TCACCTTTGCCACTTCGACCCAGGTCTTTTGCTGTTGGTTGAAGACCCTGTTGTTCCGCT 645
consensus_8455#1 AACAATTACTAAAGAGGATCGATATTTATTACTGACAGGTCCTACGCGTGCTGTTGTGGT 608
** * ** * * * * ** *** * * * ** **** * *
consensus_8455#0 CCTT----CCAAATAGTCCAAG---CTATCAAAGCTGCAACGGT--GTCGAATCCTCGTC 696
consensus_8455#1 ATCTGACCCTGTGTATTTTGAGGCCCCGCTGAAAGTGAAGGGCTCTGTCGAATC-TGAGG 667
* * ** * ** * ** ** * * * ******** *
consensus_8455#0 GTTGAGCTTTGGCAACCTTCATTCTCTTG-TCACAAAGCCATAAGAGGAAGGAGGGTT-C 754
consensus_8455#1 ATAAAGATTTAAGCTTTTTAGCTGTCCCGCTCACCGGTGCTTCTGATAGAGGTGAAACGC 727
* ** *** ** * ** * **** * * ** *** * *
consensus_8455#0 G-TTGAATGGCAGTATGTCCGACAAGCCAATTGCTCGGAGTGCGAACCACCACAGTTGAC 813
consensus_8455#1 GCTTGGTTAATAGAGAGTAC-ACTAGCAG---GCTTAGCACGCTGGAGTTGACATTTGGC 783
* *** * ** ** * ** *** *** * ** *** *** *
consensus_8455#0 GTGACTCCAGGCATGCGACCAGGAGATGATCAATCGTCTCGTCACCTTGATCACACAGGA 873
consensus_8455#1 TTTGTTGTTGA-GTCCTTGGAGGCCTCAATCAGTGTGCGTATCA--TTGATGGGTCATGG 840
* * * * * *** **** * * *** ***** ** *
consensus_8455#0 CGCACCGATCAGGATGTGGTAAACCCCGTCTCCGCAAACGATCGGCTGTCCAACATCTGT 933
consensus_8455#1 AAAGATGGTTTTCGTGGTGCATTCACTGCCCATACCCCCAGTC---TAAAAGACAATAAA 897
* * ** * * * * * * * * ** * ***
consensus_8455#0 TTAGTGCCACTAACCACAGGAAATAGCGGCATCGGGG-TGGTGCTAACGACCCTCAGATA 992
consensus_8455#1 GTCCTGCTGCTTGATTCTGGATATTGTGAGATGGTGCCTGTTACTGCTGATCGCATGATC 957
* *** ** * *** ** * * ** * * ** * ** ** * ***
consensus_8455#0 GGCTTGTCCTGGAATTGGACCTTCCCCACAAACATGGACTGATAAGCTGAGCGAGCTGGG 1052
consensus_8455#1 AAGCTTTCACGCCAT--GTTGTTTCCGTGGAAGGTGAG--GGAGACCTGACCGTTTCAGT 1013
* ** * ** * ** ** ** ** * * **** ** *
consensus_8455#0 TATTCTCCTGACGACTCCCATCTCCAGATGATTGAATCCGGCTCTTCCGA-TAGGGCATC 1111
consensus_8455#1 GCTGGCACTTGGAACTGATAATGTGATAGAAGATGAGAAGGATTTCACGCCTAAGGAAGC 1073
* ** *** * * * * * ** * * ** ** ** * *
consensus_8455#0 CAAGGATTGCAAAGATGTCCACAAGCTGAGGTACTCTAGGATAGCTTGGATTCCCAAAGC 1171
consensus_8455#1 CGGTATGAGCCAGAGCTCTCTTGACGTGGGCTTTTGTAAATTGGAAGTAACTGTCAACTG 1133
* ** * * * ** * * * ** * * * * ***
consensus_8455#0 CCCAGATATATCCCGGATCCATG----TTCTACCT--TGGAGTGCTTCGCGAACCGTCCT 1225
consensus_8455#1 GTCACTTCTTTCCTTGCTTCCTGATGGCTATACTTAATTAAGTACATTGCACAGTGGTAT 1193
** * * *** * * * ** * *** * * *** * * ** * * *
consensus_8455#0 ACGA-TTCCGCTTTCTTGCTACGACCGCTGCATGCACAGCCGGCGCAAGGGTGCGGATTG 1284
consensus_8455#1 GTGAATTGTGATGTTCCTTTGGATCTGTTGC-TTCTGAACTTCTGAAATGGGGTG--TTG 1250
** ** * * * * * * *** * * * * * ** ** * * ***
consensus_8455#0 ACGACCCTTGGATCCAGTTGTCTTCCCAGAAGAGCACGTTCATTCCATTGCCGACCCGAC 1344
consensus_8455#1 GT--TTTTTTTCTTTTGTTTACTAGCTAGAATAGCGAACTCTTGATGGACGCGGTATCCT 1308
** * *** ** * **** *** ** * **
consensus_8455#0 ATGTCAAAGAGACTTGGAGCAGGTTCCTCTCCTTTTGCGAGATTGGAACGTTGAGTCC-A 1403
consensus_8455#1 GTGTATAGAATGTTGGCAGTATTGCCACCGCTACGGATAAAGTTCGATTTCCTATCTTGA 1368
*** * * * * ** * * * * * ** ** * *
consensus_8455#0 TGCCATGGCTTTTCCGGCGATGTCCTCAGTTGCCAAGCCCAGCGGCACCGGAGTGCAAGT 1463
consensus_8455#1 TGAGATTTTGTATTTTATGATGCCCC--ATTTTCTTGGACAGAATTTGTGGTGGATGAAC 1426
** ** * * **** ** ** * * *** ** * *
consensus_8455#0 CCCATGCATTCAAGATCAGGGACACCCAATCCACCATACGATTTGGGTGCACAAACCCGT 1523
consensus_8455#1 GGCGCCCCACTTTGTGCACGCGGAGCAATGTGGACATATAATG-GAATAAAAGGGGTGAT 1485
* * * ** * * * * **** ** * * * *
consensus_8455#0 GCCCAAGCGACCCGGCAGCTTCCACCACTAGCGCTTGCTTTCCCGGACGGGAGGAAGCCG 1583
consensus_8455#1 GCTAATGAGAA-----AATTTCTAGT-TTAGATGCCACTTACCGAATCAGCTTGTCGAC- 1538
** * * ** * *** * *** *** ** * * * * *
consensus_8455#0 CGACGGACCTTATCGATTCCCTTTATCACCCACTTTGGCACATTGATGGCCATCAGCAGA 1643
consensus_8455#1 ---CACATCTTTATTATTATCTTTACA--CAACACAAACATATTATCACTAGGAATTTGG 1593
* * *** *** ***** * ** ** *** * *
consensus_8455#0 TAG-ATCGGTATTGAGATTAATACCGCATT---TACCATAGTG-ACTCGACCAATGGGCG 1698
consensus_8455#1 TGTTGTCCGTGTTACTAATAATATAGTGTACTGTAATATACTGCAGTCTAGGACAAGTTG 1653
* ** ** ** * ***** * * ** *** ** * ** * * * *
consensus_8455#0 CCATCTGCTCTGCCTTCCATACCGGCAACCGACGGGCTATTTCTGTAGTTCCATTG-TAT 1757
consensus_8455#1 GTTTCTTGATAAGCATCTAGGACAAGTTCAGGTGAGCTTCTCGACCAGCTCTGTCACTAG 1713
*** * ** * * * * * *** * ** ** * **
consensus_8455#0 GACTGTACCATATCTACTTGTATCTCATTGAACATTGAGGGAAAAATTAAAGTACAAACA 1817
consensus_8455#1 GAATG---CTTGGCTGCTTGCA----ATGAAACTTCTATGCATGTACCCAGATATGTGTT 1766
** ** * * ** **** * ** *** * * * * * * **
consensus_8455#0 AAACAAGGAGGAAATTTTTCATGGTTCCTAAGGCAGCAATGTCAAGCTGGTCCTCTCTGC 1877
consensus_8455#1 GAGGAAGTTGATTGTTGATTACTTTGGTTACAG-AACTTGATCAGGCTTGTCGTTAAGCC 1825
* *** * ** * * * ** * * * *** *** *** * *
consensus_8455#0 ACATT----CCTTCTTGAGAATTGAGATAATTGTT----- 1908
consensus_8455#1 AAACTGTAATTCACTTGTGGGTTGTGGCTATGAAGTCTCA 1865
* * * **** * *** * **
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||