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Oryza sativa
cluster # 8469 cluster # 8469       Sequences # 5       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8469#0 length = 3494 sequences # 3  
 consensus_8469#1 length = 816 sequences # 2  
consensusID : consensus_8469#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3494
fasta sequence 
                              [GCGCGCGCCGTCGTCATCGTCGTCGTCGCTGGCGGCGGTCGACCATGGAGGACGCCTACGCCAAGTCCGTGGCCGAGGTGCTCGCGGCGTTCGGCGTGGATCCAACCAAGGGCCTCTCCGATGAGCAGGTGGAGCAGCATGCTAGGCTTTACGGCAAAAACGAGCTGCCCCAAGAAGAAAGTACCCCCTTCTGGAAATTAGTGTTGAAGCAGTTTGATGATTTACTCGTGAAAATATTGATAGCAGCTGCTGTGATATCCTTCCTTTTGGCTCGAATGAATGGTGAAACTGGATTGGCAGCATTTTTGAAACCATCTGTCATCTTTCTGATATTAGCAGCAAATGCAGCCGTGGGTGTGATTACTGAAACAAATGCTGAGAAAGCTCTTGAGGAGTTGCGGGCTTATCAAGCTGATGTTGCAACAGTGCTGCGCAATGGTTGCTTTTCTATACTTCCAGCAACGGAGCTTGTCCCTGGAGATATTGTAGAAGTGGGAGTTGGATGCAAAGTTCCGGCTGACATGAGAACAATTGAAATGTTAAGTCATCAATTGCGTGTTGACCAGGCAATTTTGACAGGGGAAAGCTGTTCAGTGGCTAAAGAGCTTGAATCAACTTCAACAATGAATGCTGTCTACCAAGACAAGACAAACATTCTTTTCTCAGGTACTGTTGTTGTAGCTGGTAGAGCAAGAGCTGTTGTTATTGGTGTTGGTTCTAATACTGCAATGGGAAGTATACGTGATGCAATGCTGAGAACTGAAGATGAAGCGACCCCATTGAAGAAGAAACTTGATGAATTTGGTACTTTTTTGGCAAAGGTGATAGCAGGGATCTGTATTCTTGTTTGGGTTGTAAATATTGGACACTTCCGAGATCCTTCTCATGGTGGTTTTCTTAGGGGCGCCATTCATTATTTTAAAGTAGCTGTTGCCCTTGCTGTTGCAGCCATTCCAGAAGGTCTCCCAGCTGTAGTAACAACGTGCTTAGCTCTTGGTACCAAGAGAATGGCTCGCCTGAATGCCATTGTTAGGTCTCTTCCCTCTGTAGAGACATTAGGATGCACAACAGTCATTTGCAGTGACAAAACAGGTACTCTTACAACAAACATGATGTCCGTATCAAAGGTCTGTGTTGTGCGGTCTGTGCACCAGAGGCCAATAACTGATGAGTACTCCATTAGTGGAACTACATTTGCTCCTGATGGTTTTATATATGATGCTGGTGGATTGCAGCTGGAGTTTCCTCCTCAATCCTCATGTCTCCTTCATATAGCAATGTGTTCAGCTCTTTGCAATGAGTCCACTTTACAATACAATCCTGATAAAAAATGTTACGAGAAAATTGGGGAGTCCACTGAGGTTGCTCTGCGTGTACTGGTGGAGAAGGTTGGCCTTCCTGGTTTTGATTCAATGCCTTCAGCCCTGAACATGCTTACCAAGCATGAGCGCGCATCATACTGCAACCGTTACTGGGAAAATCAGTTTAGAAAGATATCCGTTCTAGAGTTCTCCCGAGATCGCAAAATGATGAGCGTCCTTTGCAGTCGAAAACAACAGGAGATTATGTTTTCGAAAGGTGCCCCTGAAAGTGTAATGGCCAGGTGCACCCATATATTGTGCAATGATGATGGTTCTTCTGTACCTTTGACTATGGACATTCGTAATGAATTGGAAGCTAGATTCCAAAGTTTTGCAGGAAAAGATACCCTAAGGTGCTTAGCATTAGCATTAAAACGAATGCCAGAAGGTCAACAAAGCCTTAGCTATGATGATGAGGCAAATCTCACATTTATAGGATTGGTTGGGATGCTTGACCCACCACGAGAAGAAGTTCGGAATGCTATCCACTCTTGTATGTCTGCAGGTATTCGTGTTATAGTTGTTACTGGAGACAACAAGGTAGGTGAAAAGTCTTGGTTTAAATTTGCACTGGGATCTTGGCTGTGTACATCCGTTTGGATGTAGAGGCCGGTTTAATCCATTATCTAAAAAAAAAAATTGCACTGGGATCTTTTACTACTTGGTGAGAAAATGAATATTTGCTATTTTAGTCCACTGCAGAATCCCTATGTCGGCAAATAGGTGCTTTTGAGCATTTGGAGGACTTTACAGGGTATTCTTATACAGCATCAGAGTTTGAAGGGCTTCCTCCTTTAGAAAAGGCAAATGCGTTGCAAAGGATGGTTCTGTTCTCCAGAGTGGAACCTTCTCATAAAAGGATGCTTGTTGAAGCTTTGCAGTTACACAATGAAGTGGTTGCAATGACTGGTGATGGCGTTAATGATGCACCTGCCCTGAAGAAAGCAGATATAGGAATAGCGATGGGATCAGGAACTGCAGTTGCAAAGAGTGCTTCAGACATGGTATTGGCTGATGACAACTTCGCTACCATTGTTGCAGCTGTTTCAGAGGGAAGGGCCATATATAATAACACCAAGCAGTTCATTCGCTACTCTGGGTAAACCTGGTTACCGATGGGTTGCCTGCAACTGCGATTGGTTTCAACAAGCCTGATAGCAACATCATGACAGTGAAGCCTCGTAAGGTTAATGAAGCTGTGGTTAACGGATGGCTCTTTTTCCGTTATTTGATCATTGGTGCCTACGTTGGTCTTGCTACCATAGCGGGGTTCGTTTGGTGGTTTGTTTATTCTGAAGATGGTCCTAGGTTGCCATACTCAGAATTGGTTAATTTTGATTCATGTTCAACTAGGCAAACATCATATCCTTGCAGCATCTTTGAGGATCGCCATCCATCAACTGTTTCAATGACTGTTCTTGTTGTTGTTGAGATGTTTAATGCCCTAAATAACCTAAGTGAAAATCAATCTCTCCTTGCCATTCATCCATGGAGTAACCTGTGGCTTGTTGGGTCGATTGTCCTGACAATGCTTCTTCACATATCTGTTCTGTATATTGAACCTCTATCAGCTCTTTTCTCAGTGTCTCCATTATCTTGGGCTGAGTGGAAAGTCGTTCTTTATCTCTCCTTTCCTGTAATTTTGATTGATGAGGTATTGAAGTTTTTCTCAAGAAGCTCCCGAGGTCGGAGATTCCCTTTAAGGTTACGGAGACGTGAGATACTACCAAAAGAATCCCGAGATAATTAATTTTAGATCTCGGCACACATACTGAGTTGGACACAGCACAATACGGGAAGCTTGACCTCTTGGCTGATTTTGGCTAATGATTATGAACTTGGAGGCTGACAAACATTGTAGGAATTTTTTCATACCTCTTTGTGGATGACCACAAACTGTTATTAACGGGGGCTTCAGAATACGTTTGTCTGTAAAAAAACATCGAGAAGTTTCGGATGTATGTTGTAGGATCTCTAGATGTTATTTATAGACAGCACATTCCTATTTGTAACTAATGCGTACGAAATATGATCTATATCAACTGTATTGCCCTCCCCTCAGAAGATTCGAAACTTTTATTCAGTTAGCGGAAGTGTTAATGTTTATGTTAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK073220             [GCGCGCGCCGTCGTCATCGTCGTCGTCGCTGGCGGCGGTCGACCATGGAGGACGCCTACGCCAAGTCCGTGGCCGAGGTGCTCGCGGCGTTCGGCGTGGATCCAACCAAGGGCCTCTCCGATGAGCAGGTGGAGCAGCATGCTAGGCTTTACGGCAAAAACGAGCTGCCCCAAGAAGAAAGTACCCCCTTCTGGAAATTAGTGTTGAAGCAGTTTGATGATTTACTCGTGAAAATATTGATAGCAGCTGCTGTGATATCCTTCCTTTTGGCTCGAATGAATGGTGAAACTGGATTGGCAGCATTTTTGAAACCATCTGTCATCTTTCTGATATTAGCAGCAAATGCAGCCGTGGGTGTGATTACTGAAACAAATGCTGAGAAAGCTCTTGAGGAGTTGCGGGCTTATCAAGCTGATGTTGCAACAGTGCTGCGCAATGGTTGCTTTTCTATACTTCCAGCAACGGAGCTTGTCCCTGGAGATATTGTAGAAGTGGGAGTTGGATGCAAAGTTCCGGCTGACATGAGAACAATTGAAATGTTAAGTCATCAATTGCGTGTTGACCAGGCAATTTTGACAGGGGAAAGCTGTTCAGTGGCTAAAGAGCTTGAATCAACTTCAACAATGAATGCTGTCTACCAAGACAAGACAAACATTCTTTTCTCAGGTACTGTTGTTGTAGCTGGTAGAGCAAGAGCTGTTGTTATTGGTGTTGGTTCTAATACTGCAATGGGAAGTATACGTGATGCAATGCTGAGAACTGAAGATGAAGCGACCCCATTGAAGAAGAAACTTGATGAATTTGGTACTTTTTTGGCAAAGGTGATAGCAGGGATCTGTATTCTTGTTTGGGTTGTAAATATTGGACACTTCCGAGATCCTTCTCATGGTGGTTTTCTTAGGGGCGCCATTCATTATTTTAAAGTAGCTGTTGCCCTTGCTGTTGCAGCCATTCCAGAAGGTCTCCCAGCTGTAGTAACAACGTGCTTAGCTCTTGGTACCAAGAGAATGGCTCGCCTGAATGCCATTGTTAGGTCTCTTCCCTCTGTAGAGACATTAGGATGCACAACAGTCATTTGCAGTGACAAAACAGGTACTCTTACAACAAACATGATGTCCGTATCAAAGGTCTGTGTTGTGCGGTCTGTGCACCAGAGGCCAATAACTGATGAGTACTCCATTAGTGGAACTACATTTGCTCCTGATGGTTTTATATATGATGCTGGTGGATTGCAGCTGGAGTTTCCTCCTCAATCCTCATGTCTCCTTCATATAGCAATGTGTTCAGCTCTTTGCAATGAGTCCACTTTACAATACAATCCTGATAAAAAATGTTACGAGAAAATTGGGGAGTCCACTGAGGTTGCTCTGCGTGTACTGGTGGAGAAGGTTGGCCTTCCTGGTTTTGATTCAATGCCTTCAGCCCTGAACATGCTTACCAAGCATGAGCGCGCATCATACTGCAACCGTTACTGGGAAAATCAGTTTAGAAAGATATCCGTTCTAGAGTTCTCCCGAGATCGCAAAATGATGAGCGTCCTTTGCAGTCGAAAACAACAGGAGATTATGTTTTCGAAAGGTGCCCCTGAAAGTGTAATGGCCAGGTGCACCCATATATTGTGCAATGATGATGGTTCTTCTGTACCTTTGACTATGGACATTCGTAATGAATTGGAAGCTAGATTCCAAAGTTTTGCAGGAAAAGATACCCTAAGGTGCTTAGCATTAGCATTAAAACGAATGCCAGAAGGTCAACAAAGCCTTAGCTATGATGATGAGGCAAATCTCACATTTATAGGATTGGTTGGGATGCTTGACCCACCACGAGAAGAAGTTCGGAATGCTATCCACTCTTGTATGTCTGCAGGTATTCGTGTTATAGTTGTTACTGGAGACAACAAGGTAGGTGAAAAGTCTTGGTTTAAATTTGCACTGGGATCTTGGCTGTGTACATCCGTTTGGATGTAGAGGCCGGTTTAATCCATTATCTAAAAAAAAAAATTGCACTGGGATCTTTTACTACTTGGTGAGAAAATGAATATTTGCTATTTTAGTCCACTGCAGAATCCCTATGTCGGCAAATAGGTGCTTTTGAGCATTTGGAGGACTTTACAGGGTATTCTTATACAGCATCAGAGTTTGAAGGGCTTCCTCCTTTAGAAAAGGCAAATGCGTTGCAAAGGATGGTTCTGTTCTCCAGAGTGGAACCTTCTCATAAAAGGATGCTTGTTGAAGCTTTGCAGTTACACAATGAAGTGGTTGCAATGACTGGTGATGGCGTTAATGATGCACCTGCCCTGAAGAAAGCAGATATAGGAATAGCGATGGGATCAGGAACTGCAGTTGCAAAGAGTGCTTCAGACATGGTATTGGCTGATGACAACTTCGCTACCATTGTTGCAGCTGTTTCAGAGGGAAGGGCCATATATAATAACACCAAGCAGTTCATTCGCTACTCTGGGTAAACCTGGTTACCGATGGGTTGCCTGCAACTGCGATTGGTTTCAACAAGCCTGATAGCAACATCATGACAGTGAAGCCTCGTAAGGTTAATGAAGCTGTGGTTAACGGATGGCTCTTTTTCCGTTATTTGATCATTGGTGCCTACGTTGGTCTTGCTACCATAGCGGGGTTCGTTTGGTGGTTTGTTTATTCTGAAGATGGTCCTAGGTTGCCATACTCAGAATTGGTTAATTTTGATTCATGTTCAACTAGGCAAACATCATATCCTTGCAGCATCTTTGAGGATCGCCATCCATCAACTGTTTCAATGACTGTTCTTGTTGTTGTTGAGATGTTTAATGCCCTAAATAACCTAAGTGAAAATCAATCTCTCCTTGCCATTCATCCATGGAGTAACCTGTGGCTTGTTGGGTCGATTGTCCTGACAATGCTTCTTCACATATCTGTTCTGTATATTGAACCTCTATCAGCTCTTTTCTCAGTGTCTCCATTATCTTGGGCTGAGTGGAAAGTCGTTCTTTATCTCTCCTTTCCTGTAATTTTGATTGATGAGGTATTGAAGTTTTTCTCAAGAAGCTCCCGAGGTCGGAGATTCCCTTTAAGGTTACGGAGACGTGAGATACTACCAAAAGAATCCCGAGATAATTAATTTTAGATCTCGGCACACATACTGAGTTGGACACAGCACAATACGGGAAGCTTGACCTCTTGGCTGATTTTGGCTAATGATTATGAACTTGGAGGCTGACAAACATTGTAGGAATTTTTTCATACCTCTTTGTGGATGACCACAAACTGTTATTAACGGGGGCTTCAGAATACGTTTGTCTGTAAAAAAACATCGAGAAGTTTCGGATGTATGTTGTAGGATCTCTAGATGTTATTTATAGACAGCACATTCCTATTTGTAACTAATGCGTACGAAATATGATCTATATCAACTG                                                                                        ]
[+] EMBL CF330197             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAGGTTAATGAAGCTGTGGTTAACGGATGGCTCTTTTTCCGTTATTTGATCATTGGTGCCTACGTTGGTCTTGCTACCATAGCGGGGTTCGTTTGGTGGTTTGTTTATTCTGAAGATGGTCCTAGGTTGCCATACTCAGAATTGGTTAATTTTGATTCATGTTCAACTAGGCAAACATCATATCCTTGCAGCATCTTTGAGGATCGCCATCCATCAACTGTTTCAATGACTGTTCTTGTTGTTGTTGAGATGTTTAATGCCCTAAATAACCTAAGTGAAAATCAATCTCTCCTTGCCATTCATCCATGGAGTAACCTGTGGCTTGTTGGGTCGATTGTCCTGACAATGCTTCTTCACATATCTGTTCTGTATATTGAACCTCTATCAGCTCTTTTCTCAGTGTCTCCATTATCTTGGGCTGAGTGGAAAGTCGTTCTTTACCTCTCCTTTCCTGTAATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CF331357             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTATCTCTCCTTTCCTGTAATTTTGATTGATGAGGTATTGAAGTTTTTCTCAAGAAGCTCCCGAGGTCGGAGATTCCCTTTAAGGTTACGGAGACGTGAGATACTACCAAAAGAATCCCGAGATAATTAATTTTAGATCTCGGCACACATACTGAGTTGGACCCAGCCCAATACGGGAAGCTTGACCTCTTGGCTGATTTTGGCTAATGATTATGAACTTGGAGGCTGACAAACATTGTAGGAATTTTTTCATACCTCTTTGTGGATGACCCCAAACTGTTATTAACGGGGGCTTCAGAATACGTTTGTCTGTAAAAAAACATCGAAAGGTTTCGGATGTATGTTGTAGGACCTTTAGATGTTATTTATAGACAGCACATTCCTATTTGTAACTAATGGGTACGAAATATGATCTATATCAACTGTATTGCCCTCCCCTCAGAAGATTCGAAACTTTTATTCAGTTAGCGGAAGTGTTAATGTTTATGTTAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_8469#0
GCGCGCGCCGTCGTCATCGTCGTCGTCGCTGGCGGCGGTCGACCATGGAGGACGCCTACG
CCAAGTCCGTGGCCGAGGTGCTCGCGGCGTTCGGCGTGGATCCAACCAAGGGCCTCTCCG
ATGAGCAGGTGGAGCAGCATGCTAGGCTTTACGGCAAAAACGAGCTGCCCCAAGAAGAAA
GTACCCCCTTCTGGAAATTAGTGTTGAAGCAGTTTGATGATTTACTCGTGAAAATATTGA
TAGCAGCTGCTGTGATATCCTTCCTTTTGGCTCGAATGAATGGTGAAACTGGATTGGCAG
CATTTTTGAAACCATCTGTCATCTTTCTGATATTAGCAGCAAATGCAGCCGTGGGTGTGA
TTACTGAAACAAATGCTGAGAAAGCTCTTGAGGAGTTGCGGGCTTATCAAGCTGATGTTG
CAACAGTGCTGCGCAATGGTTGCTTTTCTATACTTCCAGCAACGGAGCTTGTCCCTGGAG
ATATTGTAGAAGTGGGAGTTGGATGCAAAGTTCCGGCTGACATGAGAACAATTGAAATGT
TAAGTCATCAATTGCGTGTTGACCAGGCAATTTTGACAGGGGAAAGCTGTTCAGTGGCTA
AAGAGCTTGAATCAACTTCAACAATGAATGCTGTCTACCAAGACAAGACAAACATTCTTT
TCTCAGGTACTGTTGTTGTAGCTGGTAGAGCAAGAGCTGTTGTTATTGGTGTTGGTTCTA
ATACTGCAATGGGAAGTATACGTGATGCAATGCTGAGAACTGAAGATGAAGCGACCCCAT
TGAAGAAGAAACTTGATGAATTTGGTACTTTTTTGGCAAAGGTGATAGCAGGGATCTGTA
TTCTTGTTTGGGTTGTAAATATTGGACACTTCCGAGATCCTTCTCATGGTGGTTTTCTTA
GGGGCGCCATTCATTATTTTAAAGTAGCTGTTGCCCTTGCTGTTGCAGCCATTCCAGAAG
GTCTCCCAGCTGTAGTAACAACGTGCTTAGCTCTTGGTACCAAGAGAATGGCTCGCCTGA
ATGCCATTGTTAGGTCTCTTCCCTCTGTAGAGACATTAGGATGCACAACAGTCATTTGCA
GTGACAAAACAGGTACTCTTACAACAAACATGATGTCCGTATCAAAGGTCTGTGTTGTGC
GGTCTGTGCACCAGAGGCCAATAACTGATGAGTACTCCATTAGTGGAACTACATTTGCTC
CTGATGGTTTTATATATGATGCTGGTGGATTGCAGCTGGAGTTTCCTCCTCAATCCTCAT
GTCTCCTTCATATAGCAATGTGTTCAGCTCTTTGCAATGAGTCCACTTTACAATACAATC
CTGATAAAAAATGTTACGAGAAAATTGGGGAGTCCACTGAGGTTGCTCTGCGTGTACTGG
TGGAGAAGGTTGGCCTTCCTGGTTTTGATTCAATGCCTTCAGCCCTGAACATGCTTACCA
AGCATGAGCGCGCATCATACTGCAACCGTTACTGGGAAAATCAGTTTAGAAAGATATCCG
TTCTAGAGTTCTCCCGAGATCGCAAAATGATGAGCGTCCTTTGCAGTCGAAAACAACAGG
AGATTATGTTTTCGAAAGGTGCCCCTGAAAGTGTAATGGCCAGGTGCACCCATATATTGT
GCAATGATGATGGTTCTTCTGTACCTTTGACTATGGACATTCGTAATGAATTGGAAGCTA
GATTCCAAAGTTTTGCAGGAAAAGATACCCTAAGGTGCTTAGCATTAGCATTAAAACGAA
TGCCAGAAGGTCAACAAAGCCTTAGCTATGATGATGAGGCAAATCTCACATTTATAGGAT
TGGTTGGGATGCTTGACCCACCACGAGAAGAAGTTCGGAATGCTATCCACTCTTGTATGT
CTGCAGGTATTCGTGTTATAGTTGTTACTGGAGACAACAAGGTAGGTGAAAAGTCTTGGT
TTAAATTTGCACTGGGATCTTGGCTGTGTACATCCGTTTGGATGTAGAGGCCGGTTTAAT
CCATTATCTAAAAAAAAAAATTGCACTGGGATCTTTTACTACTTGGTGAGAAAATGAATA
TTTGCTATTTTAGTCCACTGCAGAATCCCTATGTCGGCAAATAGGTGCTTTTGAGCATTT
GGAGGACTTTACAGGGTATTCTTATACAGCATCAGAGTTTGAAGGGCTTCCTCCTTTAGA
AAAGGCAAATGCGTTGCAAAGGATGGTTCTGTTCTCCAGAGTGGAACCTTCTCATAAAAG
GATGCTTGTTGAAGCTTTGCAGTTACACAATGAAGTGGTTGCAATGACTGGTGATGGCGT
TAATGATGCACCTGCCCTGAAGAAAGCAGATATAGGAATAGCGATGGGATCAGGAACTGC
AGTTGCAAAGAGTGCTTCAGACATGGTATTGGCTGATGACAACTTCGCTACCATTGTTGC
AGCTGTTTCAGAGGGAAGGGCCATATATAATAACACCAAGCAGTTCATTCGCTACTCTGG
GTAAACCTGGTTACCGATGGGTTGCCTGCAACTGCGATTGGTTTCAACAAGCCTGATAGC
AACATCATGACAGTGAAGCCTCGTAAGGTTAATGAAGCTGTGGTTAACGGATGGCTCTTT
TTCCGTTATTTGATCATTGGTGCCTACGTTGGTCTTGCTACCATAGCGGGGTTCGTTTGG
TGGTTTGTTTATTCTGAAGATGGTCCTAGGTTGCCATACTCAGAATTGGTTAATTTTGAT
TCATGTTCAACTAGGCAAACATCATATCCTTGCAGCATCTTTGAGGATCGCCATCCATCA
ACTGTTTCAATGACTGTTCTTGTTGTTGTTGAGATGTTTAATGCCCTAAATAACCTAAGT
GAAAATCAATCTCTCCTTGCCATTCATCCATGGAGTAACCTGTGGCTTGTTGGGTCGATT
GTCCTGACAATGCTTCTTCACATATCTGTTCTGTATATTGAACCTCTATCAGCTCTTTTC
TCAGTGTCTCCATTATCTTGGGCTGAGTGGAAAGTCGTTCTTTATCTCTCCTTTCCTGTA
ATTTTGATTGATGAGGTATTGAAGTTTTTCTCAAGAAGCTCCCGAGGTCGGAGATTCCCT
TTAAGGTTACGGAGACGTGAGATACTACCAAAAGAATCCCGAGATAATTAATTTTAGATC
TCGGCACACATACTGAGTTGGACACAGCACAATACGGGAAGCTTGACCTCTTGGCTGATT
TTGGCTAATGATTATGAACTTGGAGGCTGACAAACATTGTAGGAATTTTTTCATACCTCT
TTGTGGATGACCACAAACTGTTATTAACGGGGGCTTCAGAATACGTTTGTCTGTAAAAAA
ACATCGAGAAGTTTCGGATGTATGTTGTAGGATCTCTAGATGTTATTTATAGACAGCACA
TTCCTATTTGTAACTAATGCGTACGAAATATGATCTATATCAACTGTATTGCCCTCCCCT
CAGAAGATTCGAAACTTTTATTCAGTTAGCGGAAGTGTTAATGTTTATGTTAAAAAAAAA
AAAAAAAAAAAAAA

consensusID : consensus_8469#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 816
fasta sequence 
                              [AACTGCAGTTGCAAAGAGTGCTTCAGACATGGTATTGGCTGATGACAACTTCGCTACCATTGTTGCAGCTGTTTCAGAGGGAAGGGCCATATATAATAACACCAAGCAGTTCATTCGGTACATGATTTCATCAAATATTGGGGAGGTAGTATGCATTTTTGTGGCAGCTGTGCTTGGGATGCCTGACACACTTGTACCTGTCCAGCTACTCTGGGTAAACCTGGTTACCGATGGGTTGCCTGCAACTGCGATTGGTTTCAACAAGCCTGATAGCAACATCATGACAGTGAAGCCTCGTAAGGTTAATGAAGCTGTGGTTAACGGATGGCTCTTTTTCCGTTATTTGATCATTGGTGCCTACGTTGGTCTTGCTACCATAGCGGGGTTCGTTTGGTGGTTTGTTTATTCTGAAGATGGTCCTAGGTTGCCATACTCAGAATTGGTTAATTTTGATTCATGTTCAACTAGGCAAACATCATATCCTTGCAGCATCTTTGAGGATCGCCATCCATCAACTGTTTCAATGACTGTTCTTGNTGGTGTTGAGATGTTTAATGCCCTAAATAACCTAAGTGAAAATCAATCTCTCCTTGCCATTCATCCATGGAGTAACCTGTGGCTTGGTGGGTCGATTGTCCTGACAATGCTTCTTCACATATCTGGTCTGNATCTTGAACCTCTATCAGCTCTTTTCTCAGNGTCTCCATTATCTTGGGCTGAGTGGAAAGGCGGTCTTTATCTCTCCTTTCCTGGAATTTTGATTGATGAGGAATTNGGAAGTTTTTCTCAAGAAGCTTCCGAGGTCGGGGAATNCCT]

[+] EMBL CA765244             [AACTGCAGTTGCAAAGAGTGCTTCAGACATGGTATTGGCTGATGACAACTTCGCTACCATTGTTGCAGCTGTTTCAGAGGGAAGGGCCATATATAATAACACCAAGCAGTTCATTCGGTACATGATTTCATCAAATATTGGGGAGGTAGTATGCATTTTTGTGGCAGCTGTGCTTGGGATGCCTGACACACTTGTACCTGTCCAGCTACTCTGGGTAAACCTGGTTACCGATGGGTTGCCTGCAACTGCGATTGGTTTCAACAAGCCTGATAGCAACATCATGACAGTGAAGCCTCGTAAGGTTAATGAAGCTGTGGTTAACGGATGGCTCTTTTTCCGTTATTTGATCATTGGTGCCTACGTTGGTCTTGCTACCATAGCGGGGTTCGTTTGGTGGTTTGTTTATTCTGAAGATGGTCCTAGGTTGCCATACTCAGAATTGGTTAATTTTGATTCATGTTCAACTAGGCAAACATCATATCCTTGCAGCATCTTTGAGGATCGCCATCCATCAACTGTTTCAATGACTGTTCTTGNTGGTGTTGAGATGTTTAATGCCCTAAATAACCTAAGTGAAAATCAATCTCTCCTTGCCATTCATCCATGGAGTAACCTGTGGCTTGGTGGGTCGATTGTCCTGACAATGCTTCTTCACATATCTGGTCTGNATCTTGAACCTCTATCAGCTCTTTTCTCAGNGTCTCCATTATCTTGGGCTGAGTGGAAAGGCGGTCTTTATCTCTCCTTTCCTGGAATTTTGATTGATGAGGAATTNGGAAGTTTTTCTCAAGAAGCTTCCGAGGTCGGGGAATNCCT]
[+] EMBL CF331356             [                                                                                                                                                                                                                                                                                                          AAGGTTAATGAAGCTGTGGTTAACGGATGGCTCTTTTTCCGTTATTTGATCATTGGTGCCTACGTTGGTCTTGCTACCATAGCGGGGTTCGTTTGGTGGTTTGTTTATTCTGAAAATGGTCCTATGTTGCCATACTCATAATTGGTTAAATTTGATTCATGTTCAACTATATAAACATCATATC                                                                                                                                                                                                                                                                                                                                              ]




>consensus_8469#1
AACTGCAGTTGCAAAGAGTGCTTCAGACATGGTATTGGCTGATGACAACTTCGCTACCAT
TGTTGCAGCTGTTTCAGAGGGAAGGGCCATATATAATAACACCAAGCAGTTCATTCGGTA
CATGATTTCATCAAATATTGGGGAGGTAGTATGCATTTTTGTGGCAGCTGTGCTTGGGAT
GCCTGACACACTTGTACCTGTCCAGCTACTCTGGGTAAACCTGGTTACCGATGGGTTGCC
TGCAACTGCGATTGGTTTCAACAAGCCTGATAGCAACATCATGACAGTGAAGCCTCGTAA
GGTTAATGAAGCTGTGGTTAACGGATGGCTCTTTTTCCGTTATTTGATCATTGGTGCCTA
CGTTGGTCTTGCTACCATAGCGGGGTTCGTTTGGTGGTTTGTTTATTCTGAAGATGGTCC
TAGGTTGCCATACTCAGAATTGGTTAATTTTGATTCATGTTCAACTAGGCAAACATCATA
TCCTTGCAGCATCTTTGAGGATCGCCATCCATCAACTGTTTCAATGACTGTTCTTGNTGG
TGTTGAGATGTTTAATGCCCTAAATAACCTAAGTGAAAATCAATCTCTCCTTGCCATTCA
TCCATGGAGTAACCTGTGGCTTGGTGGGTCGATTGTCCTGACAATGCTTCTTCACATATC
TGGTCTGNATCTTGAACCTCTATCAGCTCTTTTCTCAGNGTCTCCATTATCTTGGGCTGA
GTGGAAAGGCGGTCTTTATCTCTCCTTTCCTGGAATTTTGATTGATGAGGAATTNGGAAG
TTTTTCTCAAGAAGCTTCCGAGGTCGGGGAATNCCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8469#0      GCGCGCGCCGTCGTCATCGTCGTCGTCGCTGGCGGCGGTCGACCATGGAGGACGCCTACG 60
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      CCAAGTCCGTGGCCGAGGTGCTCGCGGCGTTCGGCGTGGATCCAACCAAGGGCCTCTCCG 120
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      ATGAGCAGGTGGAGCAGCATGCTAGGCTTTACGGCAAAAACGAGCTGCCCCAAGAAGAAA 180
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      GTACCCCCTTCTGGAAATTAGTGTTGAAGCAGTTTGATGATTTACTCGTGAAAATATTGA 240
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      TAGCAGCTGCTGTGATATCCTTCCTTTTGGCTCGAATGAATGGTGAAACTGGATTGGCAG 300
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      CATTTTTGAAACCATCTGTCATCTTTCTGATATTAGCAGCAAATGCAGCCGTGGGTGTGA 360
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      TTACTGAAACAAATGCTGAGAAAGCTCTTGAGGAGTTGCGGGCTTATCAAGCTGATGTTG 420
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      CAACAGTGCTGCGCAATGGTTGCTTTTCTATACTTCCAGCAACGGAGCTTGTCCCTGGAG 480
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      ATATTGTAGAAGTGGGAGTTGGATGCAAAGTTCCGGCTGACATGAGAACAATTGAAATGT 540
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      TAAGTCATCAATTGCGTGTTGACCAGGCAATTTTGACAGGGGAAAGCTGTTCAGTGGCTA 600
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      AAGAGCTTGAATCAACTTCAACAATGAATGCTGTCTACCAAGACAAGACAAACATTCTTT 660
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      TCTCAGGTACTGTTGTTGTAGCTGGTAGAGCAAGAGCTGTTGTTATTGGTGTTGGTTCTA 720
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      ATACTGCAATGGGAAGTATACGTGATGCAATGCTGAGAACTGAAGATGAAGCGACCCCAT 780
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      TGAAGAAGAAACTTGATGAATTTGGTACTTTTTTGGCAAAGGTGATAGCAGGGATCTGTA 840
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      TTCTTGTTTGGGTTGTAAATATTGGACACTTCCGAGATCCTTCTCATGGTGGTTTTCTTA 900
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      GGGGCGCCATTCATTATTTTAAAGTAGCTGTTGCCCTTGCTGTTGCAGCCATTCCAGAAG 960
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      GTCTCCCAGCTGTAGTAACAACGTGCTTAGCTCTTGGTACCAAGAGAATGGCTCGCCTGA 1020
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      ATGCCATTGTTAGGTCTCTTCCCTCTGTAGAGACATTAGGATGCACAACAGTCATTTGCA 1080
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      GTGACAAAACAGGTACTCTTACAACAAACATGATGTCCGTATCAAAGGTCTGTGTTGTGC 1140
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      GGTCTGTGCACCAGAGGCCAATAACTGATGAGTACTCCATTAGTGGAACTACATTTGCTC 1200
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      CTGATGGTTTTATATATGATGCTGGTGGATTGCAGCTGGAGTTTCCTCCTCAATCCTCAT 1260
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      GTCTCCTTCATATAGCAATGTGTTCAGCTCTTTGCAATGAGTCCACTTTACAATACAATC 1320
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      CTGATAAAAAATGTTACGAGAAAATTGGGGAGTCCACTGAGGTTGCTCTGCGTGTACTGG 1380
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      TGGAGAAGGTTGGCCTTCCTGGTTTTGATTCAATGCCTTCAGCCCTGAACATGCTTACCA 1440
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      AGCATGAGCGCGCATCATACTGCAACCGTTACTGGGAAAATCAGTTTAGAAAGATATCCG 1500
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      TTCTAGAGTTCTCCCGAGATCGCAAAATGATGAGCGTCCTTTGCAGTCGAAAACAACAGG 1560
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      AGATTATGTTTTCGAAAGGTGCCCCTGAAAGTGTAATGGCCAGGTGCACCCATATATTGT 1620
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      GCAATGATGATGGTTCTTCTGTACCTTTGACTATGGACATTCGTAATGAATTGGAAGCTA 1680
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      GATTCCAAAGTTTTGCAGGAAAAGATACCCTAAGGTGCTTAGCATTAGCATTAAAACGAA 1740
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      TGCCAGAAGGTCAACAAAGCCTTAGCTATGATGATGAGGCAAATCTCACATTTATAGGAT 1800
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      TGGTTGGGATGCTTGACCCACCACGAGAAGAAGTTCGGAATGCTATCCACTCTTGTATGT 1860
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      CTGCAGGTATTCGTGTTATAGTTGTTACTGGAGACAACAAGGTAGGTGAAAAGTCTTGGT 1920
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      TTAAATTTGCACTGGGATCTTGGCTGTGTACATCCGTTTGGATGTAGAGGCCGGTTTAAT 1980
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      CCATTATCTAAAAAAAAAAATTGCACTGGGATCTTTTACTACTTGGTGAGAAAATGAATA 2040
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      TTTGCTATTTTAGTCCACTGCAGAATCCCTATGTCGGCAAATAGGTGCTTTTGAGCATTT 2100
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      GGAGGACTTTACAGGGTATTCTTATACAGCATCAGAGTTTGAAGGGCTTCCTCCTTTAGA 2160
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      AAAGGCAAATGCGTTGCAAAGGATGGTTCTGTTCTCCAGAGTGGAACCTTCTCATAAAAG 2220
consensus_8469#1      -----------------------------------------------------------A 1
                                                                                  

consensus_8469#0      GATGCTTGTTGAAGCTTTGCAGTTACACAATGAAGTGGTTGCAATGACTGGTGATGGCGT 2280
consensus_8469#1      ACTGCAGTTGCAAAGAGTGCT-TCAGACATGGTATTGGCTG--ATGAC-AACTTCGCTAC 57
                        ***   *  **    ***  * * ***  * * *** **  *****       *    

consensus_8469#0      TAATGATGCACCTGCCCTGAAGAAAGCAGATATAGGAATAGCGATGGGATCAGGAACTGC 2340
consensus_8469#1      CATTGTTGCAGCTGTTTCAGAGGGAAGGGCCATA-----TATAATAACACCAAGCAGTTC 112
                       * ** **** ***      **  *   *  ***         **   * ** * * * *

consensus_8469#0      AGTTGCAAAGAGTGCTTCAGACATGGTATTGGCTGATGACAACTTCGCTACCATTGTTGC 2400
consensus_8469#1      ATT--CGGTACATGATTTCATCA-AATATTGG--GGAGGTAGTAT--GCATTTTTGTGGC 165
                      * *  *      ** **    **   ******  *  *  *   *    *   **** **

consensus_8469#0      AGCTGTTTCAGAGGGAAGGGCCATATATAATAACACCAAGCAGTTCATTCGCTACTCTGG 2460
consensus_8469#1      AGCTGTGCTTGGGAT----GCCTGACACACTTGTACC----TGTCCA---GCTACTCTGG 214
                      ******    * *      ***  * * * *   ***     ** **   **********

consensus_8469#0      GTAAACCTGGTTACCGATGGGTTGCCTGCAACTGCGATTGGTTTCAACAAGCCTGATAGC 2520
consensus_8469#1      GTAAACCTGGTTACCGATGGGTTGCCTGCAACTGCGATTGGTTTCAACAAGCCTGATAGC 274
                      ************************************************************

consensus_8469#0      AACATCATGACAGTGAAGCCTCGTAAGGTTAATGAAGCTGTGGTTAACGGATGGCTCTTT 2580
consensus_8469#1      AACATCATGACAGTGAAGCCTCGTAAGGTTAATGAAGCTGTGGTTAACGGATGGCTCTTT 334
                      ************************************************************

consensus_8469#0      TTCCGTTATTTGATCATTGGTGCCTACGTTGGTCTTGCTACCATAGCGGGGTTCGTTTGG 2640
consensus_8469#1      TTCCGTTATTTGATCATTGGTGCCTACGTTGGTCTTGCTACCATAGCGGGGTTCGTTTGG 394
                      ************************************************************

consensus_8469#0      TGGTTTGTTTATTCTGAAGATGGTCCTAGGTTGCCATACTCAGAATTGGTTAATTTTGAT 2700
consensus_8469#1      TGGTTTGTTTATTCTGAAGATGGTCCTAGGTTGCCATACTCAGAATTGGTTAATTTTGAT 454
                      ************************************************************

consensus_8469#0      TCATGTTCAACTAGGCAAACATCATATCCTTGCAGCATCTTTGAGGATCGCCATCCATCA 2760
consensus_8469#1      TCATGTTCAACTAGGCAAACATCATATCCTTGCAGCATCTTTGAGGATCGCCATCCATCA 514
                      ************************************************************

consensus_8469#0      ACTGTTTCAATGACTGTTCTTGTTGTTGTTGAGATGTTTAATGCCCTAAATAACCTAAGT 2820
consensus_8469#1      ACTGTTTCAATGACTGTTCTTGNTGGTGTTGAGATGTTTAATGCCCTAAATAACCTAAGT 574
                      ********************** ** **********************************

consensus_8469#0      GAAAATCAATCTCTCCTTGCCATTCATCCATGGAGTAACCTGTGGCTTGTTGGGTCGATT 2880
consensus_8469#1      GAAAATCAATCTCTCCTTGCCATTCATCCATGGAGTAACCTGTGGCTTGGTGGGTCGATT 634
                      ************************************************* **********

consensus_8469#0      GTCCTGACAATGCTTCTTCACATATCTGTTCTGTATATTGAACCTCTATCAGCTCTTTTC 2940
consensus_8469#1      GTCCTGACAATGCTTCTTCACATATCTGGTCTGNATCTTGAACCTCTATCAGCTCTTTTC 694
                      **************************** **** ** ***********************

consensus_8469#0      TCAGTGTCTCCATTATCTTGGGCTGAGTGGAAAGTCGTTCTTTATCTCTCCTTTCCTGTA 3000
consensus_8469#1      TCAGNGTCTCCATTATCTTGGGCTGAGTGGAAAGGCGGTCTTTATCTCTCCTTTCCTGGA 754
                      **** ***************************** ** ******************** *

consensus_8469#0      ATTTTGATTGATGAGGTATTG--AAGTTTTTCTCAAGAAGCTCCCGAGGTCGGAGATTCC 3058
consensus_8469#1      ATTTTGATTGATGAGGAATTNGGAAGTTTTTCTCAAGAAGCTTCCGAGGTCGGGGAATNC 814
                      **************** ***   ******************* ********** ** * *

consensus_8469#0      CTTTAAGGTTACGGAGACGTGAGATACTACCAAAAGAATCCCGAGATAATTAATTTTAGA 3118
consensus_8469#1      CT---------------------------------------------------------- 816
                      **                                                          

consensus_8469#0      TCTCGGCACACATACTGAGTTGGACACAGCACAATACGGGAAGCTTGACCTCTTGGCTGA 3178
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      TTTTGGCTAATGATTATGAACTTGGAGGCTGACAAACATTGTAGGAATTTTTTCATACCT 3238
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      CTTTGTGGATGACCACAAACTGTTATTAACGGGGGCTTCAGAATACGTTTGTCTGTAAAA 3298
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      AAACATCGAGAAGTTTCGGATGTATGTTGTAGGATCTCTAGATGTTATTTATAGACAGCA 3358
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      CATTCCTATTTGTAACTAATGCGTACGAAATATGATCTATATCAACTGTATTGCCCTCCC 3418
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      CTCAGAAGATTCGAAACTTTTATTCAGTTAGCGGAAGTGTTAATGTTTATGTTAAAAAAA 3478
consensus_8469#1      ------------------------------------------------------------
                                                                                  

consensus_8469#0      AAAAAAAAAAAAAAAA 3494
consensus_8469#1      ----------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)