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Oryza sativa
cluster # 8492 cluster # 8492       Sequences # 5       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8492#0 length = 3148 sequences # 4  
 consensus_8492#1 length = 666 sequences # 1  
consensusID : consensus_8492#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 3148
fasta sequence 
                              [GTGTGTCTCCAGTATTGGACAGTGGGGATCCAGATGCAGCTGAGGTTGATGTAGTAGTAGGGATGCAAGAACAAGCTGCTGGTTCAGCGCTTGCCATGTTGGTAACTTACGGGGAGACTGATACCTCAGCAGTCAGTGTATCTCCAGTACTGGAGAGTGGGGAGCCAGATGCAGCCCAGATTGATGTAGTAGCAGGGATGCAAGAAGAAGCTCCTGGTTCAATGTTGGCCATGGAGGTAACGTACAGGGAGGTTGATGCTGCAACAGTCAGTGTGTCTCCGGTATTGGAGAGTGTGGAGCCAGATGCAGCCAAGATCGATGTAGTAGCAAGGATGCAAGAAGAAGCTCCTGGTTCAAAGCTTGCCATGGAGGTAATGTACGGGGAGACTGGTACCGCAGCAGTCAGTGTGCCTCTGGTATTGGAGAGTAGGGAAGAGGGGTCACTTCAAGAATCAATGCAGAGACCATCTTCTCCCACAATGAACATTGAGCAAGAGTCAATGCAGAGACCATTTTCTCCCACAATTGGCACTGAGACAAGTTCGCCAGAGATGGCTCCTGCTGGATCTGAGAACTGTAAAGTATCATGGTTGCCGTTGCCCCCTCCTACACCACTTGGCGAATCAATGCCCTCCTTGCCAGTCGCAGCTGCCCCCAAGGTTTTATTGGTGATGCCGGAGGAAGCGGTTGAGTCAGTCCCTTCATCGGAAGCTCTGGATGTTGAAAAACCTGCCTCCATCACACAGGCTGAGCCCAGCTCACCTAATACGCCACCGCCAGGATTTGAGAATTTTAAGTCGTCATGGTTGCCGCTACCCACGACTCCTCCCCCAGTTGAAACCACTGATGTCTTGCCAGATGTGGTGGTTACCAAGGCAGTGGAAGCACCCATTGAGGAAGTGTCTAGGCCATTGCCAGCTTTGGAGGTGACAAACATGGAGTCAGACACTGTCCTCAGTATCTTGCCCACAACAGTCTTGCCAACAGAAGGGACTGAGGGACTACTGCAACAACCACTATTGAGACCCCCTTCTCCAGTGGTGCAATCTGAACCATGTTTGCAAAATGAGATGGCACCTCCAGGGTTCGAGAATTTTAAGTCATCATCTGAACCATGTTCAGCAGAGGAGATAGCACCTCCAGGGTCCGATAATTTCAAATCATCATCTGAACCATGTTTACCAGAGGAGATGGCACCTCCAGGGTTTGAAAATTTTAAGTCATCATCTGAACCATGTTCACAAGAGGAGATGGCACCTCCAGGGTTTGAGAATTTTAAGTCATCATGGCCACCACTTCCCACTCTGCCCCAAACTGTACCAGATGCAGCCGCAGCGGATGCTTTGGCAGCAACAGTGGAAGAAGCAGCTGGGCCACCACCTGCATTGGAGTTGGAGGCAATGGATGTGGACATGGATGCCATACATCCACCACCGCTGCCTTTTGACAGTGGAGTGGAGTCATTGCAAAAGCCACTGCCAAGAGCACCTTCTCCCATAATGCAAGAAGCGCCCTGTTCACCAGATAGGGCACCGCCAGGGTTTGAAACCTATAAGTCATCACAGTTACTGCTACCATCTCCATCTCTGGCACAAACCACAAATGTGCGACAAGATCAATCGGTAACTGAACCTGTGTCTGTGATAGAGGAAGCCCCTCAGCTACTGCACTCAGTGGAGGTAATGGGTGTACATATGGATGCAGTACCTCCATTGCTACCATCATCTGAAAGTGGAGCAGATGGGCTATCTCCGCAGCAATTCGCGCAACCTCCTCCTGCAGAAAAGGATACAACAACCTGTTTGCCAGATATGGTGCATTCAGGATGTGACAATTCAGAGCCCTCTCAGCTTCTGTCACTGCCTGCTGTTATTTCTCCAGTTCAGACCCCAGATGGCTTGGCTGATGTTCCTGCCATTGACAGGGTTGCAGTGGCATTGGAAGAATCGCCTCAGCGACCGCTTGTATCAGGGGAAATGGAAGCTGGCACAGTGCCCATTCGGTCATCACCACTGAAGAATATTTCTGAGGGGTCACTGCCACAACTAGAATCAGAGTCACATTCTCCTACATCACAGGCTGCAGATAGCTTACTAGATGCATCTGACTCAAAGTCTGTGGCTGTGGCCTCAGAGGAGATGTCTCAGCTACCACTTGCATCGCAGGCAACTACTACAGACCTTGTCAGTACAACTGCAATGCAGCCACAATCTGAGGGTATAGTGGATGAGTCATTGCAGCCTCAGCATCCACCCTCTTCTACCGCACATGATTCACCTTGTTTACAGGACTCTGTGCCATTGGTGCCACCACCACCTTCCCCTTACCTAAATAAAGAAGTAGGTCAAATGGTATGTGGAAGCTGCCGTATTCTTCTT-GCTTATTTTAGAGGTGCTGGTTATGTTCACTGTACTTGTTGCCAGACAATGAACTATGTATTGGAAGCTCATGAAGTTGGTAAGGTGCATTGTGGACACTGTGCGACATTATTGATGTATCCTTTTGGTGCGCCTGCTGTTAAGTGCTCGTTGTGCCTCTTTGTCACTGAAATTGGAGAGCGGAATGTTCGCCGTCGGTTATCAATCGAGCAACCCACAAGAACTAACTCATCA-GGGCTAGCTGAAGCCTGATCAGTTCTGGTCCCAT-GTACCCAT-CGGATTCC-AAGAAAGCTTCAAATGCTAATGTGGATGAAAGGAACAGAATGTTCGCCCTTCGTCATGAGGTGTGGGCATGAAAGTTCAAGATGGTATGGACAAGCCAAAGTGTACAAAGATAGCG--TTTTTTTTTTCATTGATGTAGACAGGAAAGGTGACCTTGTTAGTACGACTAGATCTCCTTTGAAAGGGAAAATAAAAGAAAAATAGTTCGATTCAATCTGGAGGTGATATGCGTATGTCATATGAATGATAACAGAGTAGTTTTCAGATGGTTCTTTCGCGGTGACCATCATGTTGCCCCCTGACGTGTTGAGGCTTGAGAATTAGCCATGCTGCTAATCGTGCTTTAGGCCATCATTGCTGTAGACACTTTTGCAGGGGATTGCTCAGACTTACTTTCAGAGTCCGGTCTGTGGTATGGGCAAGAATTGAGCTGCGAAANTTTTTTTGAAACATCTGGAAATATACTCAATGGGGATAATGGNAAGNTT]

[+] EMBL AK065375             [GTGTGTCTCCAGTATTGGACAGTGGGGATCCAGATGCAGCTGAGGTTGATGTAGTAGTAGGGATGCAAGAACAAGCTGCTGGTTCAGCGCTTGCCATGTTGGTAACTTACGGGGAGACTGATACCTCAGCAGTCAGTGTATCTCCAGTACTGGAGAGTGGGGAGCCAGATGCAGCCCAGATTGATGTAGTAGCAGGGATGCAAGAAGAAGCTCCTGGTTCAATGTTGGCCATGGAGGTAACGTACAGGGAGGTTGATGCTGCAACAGTCAGTGTGTCTCCGGTATTGGAGAGTGTGGAGCCAGATGCAGCCAAGATCGATGTAGTAGCAAGGATGCAAGAAGAAGCTCCTGGTTCAAAGCTTGCCATGGAGGTAATGTACGGGGAGACTGGTACCGCAGCAGTCAGTGTGCCTCTGGTATTGGAGAGTAGGGAAGAGGGGTCACTTCAAGAATCAATGCAGAGACCATCTTCTCCCACAATGAACATTGAGCAAGAGTCAATGCAGAGACCATTTTCTCCCACAATTGGCACTGAGACAAGTTCGCCAGAGATGGCTCCTGCTGGATCTGAGAACTGTAAAGTATCATGGTTGCCGTTGCCCCCTCCTACACCACTTGGCGAATCAATGCCCTCCTTGCCAGTCGCAGCTGCCCCCAAGGTTTTATTGGTGATGCCGGAGGAAGCGGTTGAGTCAGTCCCTTCATCGGAAGCTCTGGATGTTGAAAAACCTGCCTCCATCACACAGGCTGAGCCCAGCTCACCTAATACGCCACCGCCAGGATTTGAGAATTTTAAGTCGTCATGGTTGCCGCTACCCACGACTCCTCCCCCAGTTGAAACCACTGATGTCTTGCCAGATGTGGTGGTTACCAAGGCAGTGGAAGCACCCATTGAGGAAGTGTCTAGGCCATTGCCAGCTTTGGAGGTGACAAACATGGAGTCAGACACTGTCCTCAGTATCTTGCCCACAACAGTCTTGCCAACAGAAGGGACTGAGGGACTACTGCAACAACCACTATTGAGACCCCCTTCTCCAGTGGTGCAATCTGAACCATGTTTGCAAAATGAGATGGCACCTCCAGGGTTCGAGAATTTTAAGTCATCATCTGAACCATGTTCAGCAGAGGAGATAGCACCTCCAGGGTCCGATAATTTCAAATCATCATCTGAACCATGTTTACCAGAGGAGATGGCACCTCCAGGGTTTGAAAATTTTAAGTCATCATCTGAACCATGTTCACAAGAGGAGATGGCACCTCCAGGGTTTGAGAATTTTAAGTCATCATGGCCACCACTTCCCACTCTGCCCCAAACTGTACCAGATGCAGCCGCAGCGGATGCTTTGGCAGCAACAGTGGAAGAAGCAGCTGGGCCACCACCTGCATTGGAGTTGGAGGCAATGGATGTGGACATGGATGCCATACATCCACCACCGCTGCCTTTTGACAGTGGAGTGGAGTCATTGCAAAAGCCACTGCCAAGAGCACCTTCTCCCATAATGCAAGAAGCGCCCTGTTCACCAGATAGGGCACCGCCAGGGTTTGAAACCTATAAGTCATCACAGTTACTGCTACCATCTCCATCTCTGGCACAAACCACAAATGTGCGACAAGATCAATCGGTAACTGAACCTGTGTCTGTGATAGAGGAAGCCCCTCAGCTACTGCACTCAGTGGAGGTAATGGGTGTACATATGGATGCAGTACCTCCATTGCTACCATCATCTGAAAGTGGAGCAGATGGGCTATCTCCGCAGCAATTCGCGCAACCTCCTCCTGCAGAAAAGGATACAACAACCTGTTTGCCAGATATGGTGCATTCAGGATGTGACAATTCAGAGCCCTCTCAGCTTCTGTCACTGCCTGCTGTTATTTCTCCAGTTCAGACCCCAGATGGCTTGGCTGATGTTCCTGCCATTGACAGGGTTGCAGTGGCATTGGAAGAATCGCCTCAGCGACCGCTTGTATCAGGGGAAATGGAAGCTGGCACAGTGCCCATTCGGTCATCACCACTGAAGAATATTTCTGAGGGGTCACTGCCACAACTAGAATCAGAGTCACATTCTCCTACATCACAGGCTGCAGATAGCTTACTAGATGCATCTGACTCAAAGTCTGTGGCTGTGGCCTCAGAGGAGATGTCTCAGCTACCACTTGCATCGCAGGCAACTACTACAGACCTTGTCAGTACAACTGCAATGCAGCCACAATCTGAGGGTATAGTGGATGAGTCATTGCAGCCTCAGCATCCACCCTCTTCTACCGCACATGATTCACCTTGTTTACAGGACTCTGTGCCATTGGTGCCACCACCACCTTCCCCTTACCTAAATAAAGAAGTAGGTCAAATGGTATGTGGAAGCTGCCGTATTCTTCTT GCTTATTTTAGAGGTGCTGGTTATGTTCACTGTACTTGTTGCCAGACAATGAACTATGTATTGGAAGCTCATGAAGTTGGTAAGGTGCATTGTGGACACTGTGCGACATTATTGATGTATCCTTTTGGTGCGCCTGCTGTTAAGTGCTCGTTGTGCCTCTTTGTCACTGAAATTGGAGAGCGGAATGTTCGCCGTCGGTTATCAATCGAGCAACCCACAAGAACTAACTCATCA GGGCTAGCTGAAGCCTGATCAGTTCTGGTCCCAT GTACCCAT CGGATTCC AAGAAAGCTTCAAATGCTAATGTGGATGAAAGGAACAGAATGTTCGCCCTTCGTCATGAGGTGTGGGCATGAAAGTTCAAGATGGTATGGACAAGCCAAAGTGTACAAAGATAGCG  TTTTTTTTTTCATTGATGTAGACAGGAAAGGTGACCTTGTTAGTACGACTAGATCTCCTTTGAAAGGGAAAATAAAAGAAAAATAGTTCGATTCAATCTGGAGGTGATATGCGTATGTCATATGAATGATAACAGAGTAGTTTTCAGATGGTTCTTTCGCGGTGACCATCAT                                                                                                                                                                                                      ]
[+] EMBL AU031595             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CACAGTGCCCATTCGGTCATCACCACTGAAGAATATTTCTGAGGGGTCACTGCCACAACTAGAATCAGAGTCACATTCTCCTACATCACAGGCTGCAGATAGCTTACTAGATGCATCTGACTCAAAGTCTGTGGCTGTGGCCTCAGAGGAGATGTCTCAGCTACCACTTGCATCGCAGGCAACTACTACAGACCTTGTCAGTACAACTGCAATGCAGCCACAATCTGAGGGTATAGTGGATGAGTCATTGCAGCCTCAGCATCCACCCTCTTCTACCGCACATGATTCACCTTGTTTACAGGACTCTGTGCCATTGGTGCCACCACCACCTTCCCCTTACCTAAATAAAGAAGTAGGTCAAATGGTATGTGGAAGCTGCCGTATTCTTCTTGGCTTATTTTAGAGGTGCTGGTTATGTTCACTGTACTTGTTGCCAGACAATGAACTATGTATTGGAAGCTCATGAAGTTGGTAAGGTGCATTGTGGACACTGTGCGACATTATTGATGTATCCTTTTGGTGCGCCTGCTGTTAAGTGCTCGTTGTGCCTCTTTGTCACTGAAATTGGAGAGCGGAATGTTCGCCGTCGGTTAACAATCGAGCAACCCACAAGAACTAACTCATCAGGGGCTAGCTGAAGCCTGATCAGTTCTGGGCCCATGGTACCCATCCGGATTCCAAAGAAAGCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU031596             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTTGTCAGTACAACTGCAATGCAGCCACAATCTGAGGGTATAGTGGATGAGTCATTGCAGCCTCAGCATCCACCCTCTTCTACCGCACATGATTCACCTTGTTTACAGGACTCTGTGCCATTGGTGCCACCACCACCTTCCCCTTACCTAAATAAAGAAGTAGGTCAAATGGTATGTGGAAGCTGCCGTATTCTTCTT GCTTATTTTAGAGGTNCTGGTTATGTTCACTGTACTTGTTNCCAGACAATGAACTATGTATTGGAAGCTCATGAAGTTGGTAAGGTGCATTGTGGACACTGTGCGACATTATTGATGTANCCTTTTGGTNCGCCTGCTGTTAAGTGCTCGTTGTGCCTCTTTGTCACTGAAATTGGAGAGCGGAATGTTCGCCGTCGGTTATCAATCGAGCAACCCACAAGAACTAACTCATCA GGGCTAGCTGAAGCCTGATCAGTTCTGGTCCCAT GTACCCAT CGGATTCC AAGAAAGCTTCAAATGCTAATGTGGATGAAAGGAACAGAATGTTCGCCCTTCGTCATGAGGTGTGGGCATGAAAGTTCAAGATGGTATGGACAAGCCAAAGTGTACAAAGATAGCG  TTTTTTTTTTCATTGATGTAGACAGGAAAGGTGACCTTGTTAGTACGACTAGATCTCCTTTGAAAGGGAAAATAAAAGAAAAATAGTTCGATTCAAaaaaaa                                                                                                                                                                                                                                                                            ]
[+] EMBL CB096307             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCAAATGGTATGTGGAAGCTGCCGTATTCTTCTT GCTTATTTTAGAGGTGCTGGTTATGTTCACTGTACTTGTTGCCAGACAATGAACTATGTATTGGAAGCTCATGAAGTTGGTAAGGTGCATTGTGGACACTGTGCGACATTATTGATGTATCCTTTTGGTGCGCCTGCTGTTAAGTGCTCGTTGTGCCTCTTTGTCACTGAAATTGGAGAGCGGAATGTTCGCCGTCGGTTATCAATCGAGCAACCCACAAGAACTAACTCATCA GGGCTAGCTGAAGCCTGATCAGTTCTGGTCCCAT GTACCCAT CGGATTCC AAGAAAGCTTCAAATGCTAATGTGGATGAAAGGAACAGAATGTTCGCCCTTCGTCATGAGGTGTGGGCATGAAAGTTCAAGATGGTATGGACAAGCCAAAGTGTACAAAGATAGCGTTTTTTTTTTTTCATTGATGTAGACAGGAAAGGTGACCTTGTTAGTACGACTAGATATCCTTTGAAAGGGAAAATAAAAGAAAAATAGTTCGATTCAATCTGGAGGTGATATGCGTATGTCATATGAATGATAACAGAGTAGTTTTCAGATGGTTCTTTCGCGGTGACCATCATGTTGCCCCCTGACGTGTTGAGGCTTGAGAATTAGCCATGCTGCTAATCGTGCTTTAGGCCATCATTGCTGTAGACACTTTTGCAGGGGATTGCTCAGACTTACTTTCAGAGTCCGGTCTGTGGTATGGGCAAGAATTGAGCTGCGAAANTTTTTTTGAAACATCTGGAAATATACTCAATGGGGATAATGGNAAGNTT]




>consensus_8492#0
GTGTGTCTCCAGTATTGGACAGTGGGGATCCAGATGCAGCTGAGGTTGATGTAGTAGTAG
GGATGCAAGAACAAGCTGCTGGTTCAGCGCTTGCCATGTTGGTAACTTACGGGGAGACTG
ATACCTCAGCAGTCAGTGTATCTCCAGTACTGGAGAGTGGGGAGCCAGATGCAGCCCAGA
TTGATGTAGTAGCAGGGATGCAAGAAGAAGCTCCTGGTTCAATGTTGGCCATGGAGGTAA
CGTACAGGGAGGTTGATGCTGCAACAGTCAGTGTGTCTCCGGTATTGGAGAGTGTGGAGC
CAGATGCAGCCAAGATCGATGTAGTAGCAAGGATGCAAGAAGAAGCTCCTGGTTCAAAGC
TTGCCATGGAGGTAATGTACGGGGAGACTGGTACCGCAGCAGTCAGTGTGCCTCTGGTAT
TGGAGAGTAGGGAAGAGGGGTCACTTCAAGAATCAATGCAGAGACCATCTTCTCCCACAA
TGAACATTGAGCAAGAGTCAATGCAGAGACCATTTTCTCCCACAATTGGCACTGAGACAA
GTTCGCCAGAGATGGCTCCTGCTGGATCTGAGAACTGTAAAGTATCATGGTTGCCGTTGC
CCCCTCCTACACCACTTGGCGAATCAATGCCCTCCTTGCCAGTCGCAGCTGCCCCCAAGG
TTTTATTGGTGATGCCGGAGGAAGCGGTTGAGTCAGTCCCTTCATCGGAAGCTCTGGATG
TTGAAAAACCTGCCTCCATCACACAGGCTGAGCCCAGCTCACCTAATACGCCACCGCCAG
GATTTGAGAATTTTAAGTCGTCATGGTTGCCGCTACCCACGACTCCTCCCCCAGTTGAAA
CCACTGATGTCTTGCCAGATGTGGTGGTTACCAAGGCAGTGGAAGCACCCATTGAGGAAG
TGTCTAGGCCATTGCCAGCTTTGGAGGTGACAAACATGGAGTCAGACACTGTCCTCAGTA
TCTTGCCCACAACAGTCTTGCCAACAGAAGGGACTGAGGGACTACTGCAACAACCACTAT
TGAGACCCCCTTCTCCAGTGGTGCAATCTGAACCATGTTTGCAAAATGAGATGGCACCTC
CAGGGTTCGAGAATTTTAAGTCATCATCTGAACCATGTTCAGCAGAGGAGATAGCACCTC
CAGGGTCCGATAATTTCAAATCATCATCTGAACCATGTTTACCAGAGGAGATGGCACCTC
CAGGGTTTGAAAATTTTAAGTCATCATCTGAACCATGTTCACAAGAGGAGATGGCACCTC
CAGGGTTTGAGAATTTTAAGTCATCATGGCCACCACTTCCCACTCTGCCCCAAACTGTAC
CAGATGCAGCCGCAGCGGATGCTTTGGCAGCAACAGTGGAAGAAGCAGCTGGGCCACCAC
CTGCATTGGAGTTGGAGGCAATGGATGTGGACATGGATGCCATACATCCACCACCGCTGC
CTTTTGACAGTGGAGTGGAGTCATTGCAAAAGCCACTGCCAAGAGCACCTTCTCCCATAA
TGCAAGAAGCGCCCTGTTCACCAGATAGGGCACCGCCAGGGTTTGAAACCTATAAGTCAT
CACAGTTACTGCTACCATCTCCATCTCTGGCACAAACCACAAATGTGCGACAAGATCAAT
CGGTAACTGAACCTGTGTCTGTGATAGAGGAAGCCCCTCAGCTACTGCACTCAGTGGAGG
TAATGGGTGTACATATGGATGCAGTACCTCCATTGCTACCATCATCTGAAAGTGGAGCAG
ATGGGCTATCTCCGCAGCAATTCGCGCAACCTCCTCCTGCAGAAAAGGATACAACAACCT
GTTTGCCAGATATGGTGCATTCAGGATGTGACAATTCAGAGCCCTCTCAGCTTCTGTCAC
TGCCTGCTGTTATTTCTCCAGTTCAGACCCCAGATGGCTTGGCTGATGTTCCTGCCATTG
ACAGGGTTGCAGTGGCATTGGAAGAATCGCCTCAGCGACCGCTTGTATCAGGGGAAATGG
AAGCTGGCACAGTGCCCATTCGGTCATCACCACTGAAGAATATTTCTGAGGGGTCACTGC
CACAACTAGAATCAGAGTCACATTCTCCTACATCACAGGCTGCAGATAGCTTACTAGATG
CATCTGACTCAAAGTCTGTGGCTGTGGCCTCAGAGGAGATGTCTCAGCTACCACTTGCAT
CGCAGGCAACTACTACAGACCTTGTCAGTACAACTGCAATGCAGCCACAATCTGAGGGTA
TAGTGGATGAGTCATTGCAGCCTCAGCATCCACCCTCTTCTACCGCACATGATTCACCTT
GTTTACAGGACTCTGTGCCATTGGTGCCACCACCACCTTCCCCTTACCTAAATAAAGAAG
TAGGTCAAATGGTATGTGGAAGCTGCCGTATTCTTCTTGCTTATTTTAGAGGTGCTGGTT
ATGTTCACTGTACTTGTTGCCAGACAATGAACTATGTATTGGAAGCTCATGAAGTTGGTA
AGGTGCATTGTGGACACTGTGCGACATTATTGATGTATCCTTTTGGTGCGCCTGCTGTTA
AGTGCTCGTTGTGCCTCTTTGTCACTGAAATTGGAGAGCGGAATGTTCGCCGTCGGTTAT
CAATCGAGCAACCCACAAGAACTAACTCATCAGGGCTAGCTGAAGCCTGATCAGTTCTGG
TCCCATGTACCCATCGGATTCCAAGAAAGCTTCAAATGCTAATGTGGATGAAAGGAACAG
AATGTTCGCCCTTCGTCATGAGGTGTGGGCATGAAAGTTCAAGATGGTATGGACAAGCCA
AAGTGTACAAAGATAGCGTTTTTTTTTTCATTGATGTAGACAGGAAAGGTGACCTTGTTA
GTACGACTAGATCTCCTTTGAAAGGGAAAATAAAAGAAAAATAGTTCGATTCAATCTGGA
GGTGATATGCGTATGTCATATGAATGATAACAGAGTAGTTTTCAGATGGTTCTTTCGCGG
TGACCATCATGTTGCCCCCTGACGTGTTGAGGCTTGAGAATTAGCCATGCTGCTAATCGT
GCTTTAGGCCATCATTGCTGTAGACACTTTTGCAGGGGATTGCTCAGACTTACTTTCAGA
GTCCGGTCTGTGGTATGGGCAAGAATTGAGCTGCGAAANTTTTTTTGAAACATCTGGAAA
TATACTCAATGGGGATAATGGNAAGNTT

consensusID : consensus_8492#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 666
fasta sequence 
                              [GGGATAGTGGTTAGTCATGCACCTCAGCATCACCCTTTTTTCCGCACTTGTTTCCCTTGTTACAGGACTCGGGGCCATTGGTCCANCCNNCCNCCTCCCCTTACCTAACAAAGAAGTAGGTCAAATGGTATGTGGAANCTCCCGTTTCCTCTTGCTTATTTTAGAAGTGCTGGTTATGTTCACTGTACTGTTNGCCAGACAATGAACTATGTATTGGAAGCTCATGAAGTTGGTAAGGTGCATTGTGGACACTGTGCGACATTATTGATGTATCCTTTTGGTGCGCCTGCTGTTAAGTGCTCGTTGTGCCTCTTTGTCACTGAAATTGGAGAGCGGAATGTTTGCCGTCGGTTATCAATCGAGCAACCCCCAAGAACTAACTCATCAGGGCTAGCTGAAGCCTGATCAGTTCTGGTCCCATGTACCCATCGGATTCCAAGAAAGCTTCAAATGCTAATGTGGATGAAAGGAACAGAATGTTCGCCCTTTGTCATGAGGCGTGGGCATGAAAGTTCAAGATGGTATGGGCAAGCCAAAGTGTACAAAGATAGCGTTTTTTTTTTTTCATTGATGTAGACAGGAAAGGTGACCTTGTTAGTACGACTAGATATCCTTTGAAAGGGAAAATAAAAGAAAAATAGTTCGATTCAAAAAAAAAAAAAAAAA]

[-] EMBL CA759792             [GGGATAGTGGTTAGTCATGCACCTCAGCATCACCCTTTTTTCCGCACTTGTTTCCCTTGTTACAGGACTCGGGGCCATTGGTCCANCCNNCCNCCTCCCCTTACCTAACAAAGAAGTAGGTCAAATGGTATGTGGAANCTCCCGTTTCCTCTTGCTTATTTTAGAAGTGCTGGTTATGTTCACTGTACTGTTNGCCAGACAATGAACTATGTATTGGAAGCTCATGAAGTTGGTAAGGTGCATTGTGGACACTGTGCGACATTATTGATGTATCCTTTTGGTGCGCCTGCTGTTAAGTGCTCGTTGTGCCTCTTTGTCACTGAAATTGGAGAGCGGAATGTTTGCCGTCGGTTATCAATCGAGCAACCCCCAAGAACTAACTCATCAGGGCTAGCTGAAGCCTGATCAGTTCTGGTCCCATGTACCCATCGGATTCCAAGAAAGCTTCAAATGCTAATGTGGATGAAAGGAACAGAATGTTCGCCCTTTGTCATGAGGCGTGGGCATGAAAGTTCAAGATGGTATGGGCAAGCCAAAGTGTACAAAGATAGCGTTTTTTTTTTTTCATTGATGTAGACAGGAAAGGTGACCTTGTTAGTACGACTAGATATCCTTTGAAAGGGAAAATAAAAGAAAAATAGTTCGATTCAAAAAAAAAAAAAAAAA]




>consensus_8492#1
GGGATAGTGGTTAGTCATGCACCTCAGCATCACCCTTTTTTCCGCACTTGTTTCCCTTGT
TACAGGACTCGGGGCCATTGGTCCANCCNNCCNCCTCCCCTTACCTAACAAAGAAGTAGG
TCAAATGGTATGTGGAANCTCCCGTTTCCTCTTGCTTATTTTAGAAGTGCTGGTTATGTT
CACTGTACTGTTNGCCAGACAATGAACTATGTATTGGAAGCTCATGAAGTTGGTAAGGTG
CATTGTGGACACTGTGCGACATTATTGATGTATCCTTTTGGTGCGCCTGCTGTTAAGTGC
TCGTTGTGCCTCTTTGTCACTGAAATTGGAGAGCGGAATGTTTGCCGTCGGTTATCAATC
GAGCAACCCCCAAGAACTAACTCATCAGGGCTAGCTGAAGCCTGATCAGTTCTGGTCCCA
TGTACCCATCGGATTCCAAGAAAGCTTCAAATGCTAATGTGGATGAAAGGAACAGAATGT
TCGCCCTTTGTCATGAGGCGTGGGCATGAAAGTTCAAGATGGTATGGGCAAGCCAAAGTG
TACAAAGATAGCGTTTTTTTTTTTTCATTGATGTAGACAGGAAAGGTGACCTTGTTAGTA
CGACTAGATATCCTTTGAAAGGGAAAATAAAAGAAAAATAGTTCGATTCAAAAAAAAAAA
AAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8492#0      GTGTGTCTCCAGTATTGGACAGTGGGGATCCAGATGCAGCTGAGGTTGATGTAGTAGTAG 60
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      GGATGCAAGAACAAGCTGCTGGTTCAGCGCTTGCCATGTTGGTAACTTACGGGGAGACTG 120
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      ATACCTCAGCAGTCAGTGTATCTCCAGTACTGGAGAGTGGGGAGCCAGATGCAGCCCAGA 180
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      TTGATGTAGTAGCAGGGATGCAAGAAGAAGCTCCTGGTTCAATGTTGGCCATGGAGGTAA 240
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      CGTACAGGGAGGTTGATGCTGCAACAGTCAGTGTGTCTCCGGTATTGGAGAGTGTGGAGC 300
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      CAGATGCAGCCAAGATCGATGTAGTAGCAAGGATGCAAGAAGAAGCTCCTGGTTCAAAGC 360
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      TTGCCATGGAGGTAATGTACGGGGAGACTGGTACCGCAGCAGTCAGTGTGCCTCTGGTAT 420
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      TGGAGAGTAGGGAAGAGGGGTCACTTCAAGAATCAATGCAGAGACCATCTTCTCCCACAA 480
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      TGAACATTGAGCAAGAGTCAATGCAGAGACCATTTTCTCCCACAATTGGCACTGAGACAA 540
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      GTTCGCCAGAGATGGCTCCTGCTGGATCTGAGAACTGTAAAGTATCATGGTTGCCGTTGC 600
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      CCCCTCCTACACCACTTGGCGAATCAATGCCCTCCTTGCCAGTCGCAGCTGCCCCCAAGG 660
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      TTTTATTGGTGATGCCGGAGGAAGCGGTTGAGTCAGTCCCTTCATCGGAAGCTCTGGATG 720
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      TTGAAAAACCTGCCTCCATCACACAGGCTGAGCCCAGCTCACCTAATACGCCACCGCCAG 780
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      GATTTGAGAATTTTAAGTCGTCATGGTTGCCGCTACCCACGACTCCTCCCCCAGTTGAAA 840
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      CCACTGATGTCTTGCCAGATGTGGTGGTTACCAAGGCAGTGGAAGCACCCATTGAGGAAG 900
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      TGTCTAGGCCATTGCCAGCTTTGGAGGTGACAAACATGGAGTCAGACACTGTCCTCAGTA 960
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      TCTTGCCCACAACAGTCTTGCCAACAGAAGGGACTGAGGGACTACTGCAACAACCACTAT 1020
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      TGAGACCCCCTTCTCCAGTGGTGCAATCTGAACCATGTTTGCAAAATGAGATGGCACCTC 1080
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      CAGGGTTCGAGAATTTTAAGTCATCATCTGAACCATGTTCAGCAGAGGAGATAGCACCTC 1140
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      CAGGGTCCGATAATTTCAAATCATCATCTGAACCATGTTTACCAGAGGAGATGGCACCTC 1200
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      CAGGGTTTGAAAATTTTAAGTCATCATCTGAACCATGTTCACAAGAGGAGATGGCACCTC 1260
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      CAGGGTTTGAGAATTTTAAGTCATCATGGCCACCACTTCCCACTCTGCCCCAAACTGTAC 1320
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      CAGATGCAGCCGCAGCGGATGCTTTGGCAGCAACAGTGGAAGAAGCAGCTGGGCCACCAC 1380
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      CTGCATTGGAGTTGGAGGCAATGGATGTGGACATGGATGCCATACATCCACCACCGCTGC 1440
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      CTTTTGACAGTGGAGTGGAGTCATTGCAAAAGCCACTGCCAAGAGCACCTTCTCCCATAA 1500
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      TGCAAGAAGCGCCCTGTTCACCAGATAGGGCACCGCCAGGGTTTGAAACCTATAAGTCAT 1560
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      CACAGTTACTGCTACCATCTCCATCTCTGGCACAAACCACAAATGTGCGACAAGATCAAT 1620
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      CGGTAACTGAACCTGTGTCTGTGATAGAGGAAGCCCCTCAGCTACTGCACTCAGTGGAGG 1680
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      TAATGGGTGTACATATGGATGCAGTACCTCCATTGCTACCATCATCTGAAAGTGGAGCAG 1740
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      ATGGGCTATCTCCGCAGCAATTCGCGCAACCTCCTCCTGCAGAAAAGGATACAACAACCT 1800
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      GTTTGCCAGATATGGTGCATTCAGGATGTGACAATTCAGAGCCCTCTCAGCTTCTGTCAC 1860
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      TGCCTGCTGTTATTTCTCCAGTTCAGACCCCAGATGGCTTGGCTGATGTTCCTGCCATTG 1920
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      ACAGGGTTGCAGTGGCATTGGAAGAATCGCCTCAGCGACCGCTTGTATCAGGGGAAATGG 1980
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      AAGCTGGCACAGTGCCCATTCGGTCATCACCACTGAAGAATATTTCTGAGGGGTCACTGC 2040
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      CACAACTAGAATCAGAGTCACATTCTCCTACATCACAGGCTGCAGATAGCTTACTAGATG 2100
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      CATCTGACTCAAAGTCTGTGGCTGTGGCCTCAGAGGAGATGTCTCAGCTACCACTTGCAT 2160
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      CGCAGGCAACTACTACAGACCTTGTCAGTACAACTGCAATGCAGCCACAATCTGAGGGTA 2220
consensus_8492#1      --------------------------------------------------------GGGA 4
                                                                              ** *

consensus_8492#0      TAGTGGATGAGTCATTGCAGCCTCAGCATCCACCCTCTTCTACCGCACATGATTCACCTT 2280
consensus_8492#1      TAGTGGTT-AGTCAT-GCA-CCTCAGCATC-ACCCTTTTTT-CCGCACTTGTTTC-CCTT 58
                      ****** * ****** *** ********** ***** ** * ****** ** *** ****

consensus_8492#0      GTTTACAGGACTCTGTGCCATTGGTGCCACCACCACCTTCCCCTTACCTAAATAAAGAAG 2340
consensus_8492#1      GTT-ACAGGACTCGGGGCCATTGGTCCANCCNNCCNCCTCCCCTTACCTAA-CAAAGAAG 116
                      *** ********* * ********* *  **  *  * *************  *******

consensus_8492#0      TAGGTCAAATGGTATGTGGAAGCTGCCGTATTCTTCTTGCTTATTTTAGAGGTGCTGGTT 2400
consensus_8492#1      TAGGTCAAATGGTATGTGGAANCTCCCGT-TTCCTCTTGCTTATTTTAGAAGTGCTGGTT 175
                      ********************* ** **** *** **************** *********

consensus_8492#0      ATGTTCACTGTACTTGTTGCCAGACAATGAACTATGTATTGGAAGCTCATGAAGTTGGTA 2460
consensus_8492#1      ATGTTCACTGTACTGTTNGCCAGACAATGAACTATGTATTGGAAGCTCATGAAGTTGGTA 235
                      **************  * ******************************************

consensus_8492#0      AGGTGCATTGTGGACACTGTGCGACATTATTGATGTATCCTTTTGGTGCGCCTGCTGTTA 2520
consensus_8492#1      AGGTGCATTGTGGACACTGTGCGACATTATTGATGTATCCTTTTGGTGCGCCTGCTGTTA 295
                      ************************************************************

consensus_8492#0      AGTGCTCGTTGTGCCTCTTTGTCACTGAAATTGGAGAGCGGAATGTTCGCCGTCGGTTAT 2580
consensus_8492#1      AGTGCTCGTTGTGCCTCTTTGTCACTGAAATTGGAGAGCGGAATGTTTGCCGTCGGTTAT 355
                      *********************************************** ************

consensus_8492#0      CAATCGAGCAACCCACAAGAACTAACTCATCAGGGCTAGCTGAAGCCTGATCAGTTCTGG 2640
consensus_8492#1      CAATCGAGCAACCCCCAAGAACTAACTCATCAGGGCTAGCTGAAGCCTGATCAGTTCTGG 415
                      ************** *********************************************

consensus_8492#0      TCCCATGTACCCATCGGATTCCAAGAAAGCTTCAAATGCTAATGTGGATGAAAGGAACAG 2700
consensus_8492#1      TCCCATGTACCCATCGGATTCCAAGAAAGCTTCAAATGCTAATGTGGATGAAAGGAACAG 475
                      ************************************************************

consensus_8492#0      AATGTTCGCCCTTCGTCATGAGGTGTGGGCATGAAAGTTCAAGATGGTATGGACAAGCCA 2760
consensus_8492#1      AATGTTCGCCCTTTGTCATGAGGCGTGGGCATGAAAGTTCAAGATGGTATGGGCAAGCCA 535
                      ************* ********* **************************** *******

consensus_8492#0      AAGTGTACAAAGATAGCGTTTTTTTTTT--CATTGATGTAGACAGGAAAGGTGACCTTGT 2818
consensus_8492#1      AAGTGTACAAAGATAGCGTTTTTTTTTTTTCATTGATGTAGACAGGAAAGGTGACCTTGT 595
                      ****************************  ******************************

consensus_8492#0      TAGTACGACTAGATCTCCTTTGAAAGGGAAAATAAAAGAAAAATAGTTCGATTCAATCTG 2878
consensus_8492#1      TAGTACGACTAGATATCCTTTGAAAGGGAAAATAAAAGAAAAATAGTTCGATTCAAAAAA 655
                      ************** *****************************************    

consensus_8492#0      GAGGTGATATGCGTATGTCATATGAATGATAACAGAGTAGTTTTCAGATGGTTCTTTCGC 2938
consensus_8492#1      AAAAAAAAAAA------------------------------------------------- 666
                       *    * *                                                   

consensus_8492#0      GGTGACCATCATGTTGCCCCCTGACGTGTTGAGGCTTGAGAATTAGCCATGCTGCTAATC 2998
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      GTGCTTTAGGCCATCATTGCTGTAGACACTTTTGCAGGGGATTGCTCAGACTTACTTTCA 3058
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      GAGTCCGGTCTGTGGTATGGGCAAGAATTGAGCTGCGAAANTTTTTTTGAAACATCTGGA 3118
consensus_8492#1      ------------------------------------------------------------
                                                                                  

consensus_8492#0      AATATACTCAATGGGGATAATGGNAAGNTT 3148
consensus_8492#1      ------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)