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Oryza sativa
cluster # 8503 cluster # 8503       Sequences # 5       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8503#0 length = 2185 sequences # 2  
 consensus_8503#1 length = 993 sequences # 2  
consensus_8503#2 length = 541 sequences # 1  
consensusID : consensus_8503#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2185
fasta sequence 
                              [ATTTTCACTTTCACTTTGACCAACCTAATCTTCCCCTTCTATCCTCTCCTCTCCTCTCCGTTGACAGCCGTCGACCCCTCCTCGCCATGGACCCCCGCTACCTCCAGGAGCTCGGCGCGCTCCTCCCCCGCGCGCGCGGTGTCACCCTCCCTCAGGTGTTCGTCGGCGGCCGCCACCTCGGCGGCGCCGAGGAGGTCCGCCGCCTCCACGAGTCCGGCGAGCTCCGACGCGTTGTAGCCGGCGCCGGCGCAACCGCCCTCGCCGCCTGCAGCCGGTGCGGTGGCGAGCGCTACGTGCTCTGCGGCAGCTGCAACGGCAGTCACAAGCGGTACAGCCTCAAGGAAGCAACAGTACGAGGTCGTCTTGCCCCTCCCCTCCTTCCTCTTCCCCTCTCCTAATGTTTCCTCTTCTTCTTTTGCATCTTGCTGATAGGGGCTAAGGGGATGGGGAGAGGGGTTGGGATGGGCTCCTGGCTGTTCTTTGCTGATGGGGCAAAGGGGATGTAGTCTTGTGGGGTGGAGGTAGAGGCCAAATCTTGTGTTTGTTCAGATCTGATGACAGTGAATGGATGTGATGTGAGATTTAGTGGCTGATTAGTTCGTGATGCAGTGCATATTCTGAAAATAGAGAATAATAAAATTGTAGAATGTAGATGCACATGATTTTTGCTTAGTGATGTTTGTAGCGGGATTTAGTATTTTAAAATTCGCTTCTTCAGTGGTGATTCTAATGACAGATTTTGTCTGCATTGGTTCCACAAGAATCTTTTTTTCCTAGAGGATGCTTGCTTATGCTTCAGCTCATGTCTTTCTGTAATCAAATACCATATTTTTGCCCTAGGCCTTTGTGTATGTATCTCAGTAATTGAAGTCTTGCATCTTTGGCCTGTAGGGCTGGGTGTATGTATATCAGTATTAAAGTTATGCTTCTAAGCTTTACTACTGACTGAGCAGCTACATCAAGATATGCAAGGATCCTTACAGATATTTTAGACAACCTGGAACAACATCGATCCAATTCTAAAGTCGATTTGGTATATTATATTTTTCTTCTTTGTGTAGACATCAACCATTGGTCGTGAAGACATCCGAGTCTCAGAGGACTGCAATATGATAGGTAAGGAAATTCTGATAGGATGTAATGGAGGTCATATCACAATTACTTCTGACAATGATGTTGCAGGAACGATTTAAGTGTAATCTCTTCGTCCCTTTACATTTTTTTCCAGGTTAGAAATCATAATTGGTGATGTGCTTACACTAATGTTTCCGATATTACAGTTCGTCAATACCATTACAAATAGTAGTTTGCATAGTACAATTCTTCATTGAACAATACCTAAGATTTTTGTAAAGGTAGTGTTTATGTTATTTGTTTACATATAGCTAGTTAGCACTAGATCATTAGCATTTCACTGGTTCAAGCCGAGGTTTTCTGAAATTTTTTGAAGTTACTCTCTGGTTGTCTTAGTAAATTCATCTATCTAGGCTATGTCTAATTGCTCTCTTTAGCATGAATACTATTGGGTGTCTTTGTAAGAACTAATTTGTACCTTTGGAACAATTAATGTGACCTACACTGCTTTAGTTCTAGGCTCCTGGCAAAGGTAAGCACTAGAAAGACATACCAGAACTAAGTAACAATGTATACTTCTTTCTTAATATCAGAACATAGTATTGATGTATGGGATTTTGATGTTGAATTTGTTTTGTGAATCATCAGATCCTTCACCTCCTGATGCTGCAGTCATATGGACTTCATTAGTTGAGCTAAGCAATTGGCAATTTCATGGAAAACTAGGAAGCACACTATAGCTAATGGTAAAAGCTGGGGTTACATCATGGCTGATGGCGATAGTGGCATCCATTTTAGAGTGATGAAGCTATCCCAGGATGAAAAACAGACAATGATTGATGGTTATTAAGTCCTTTTCTTTTTCCAGACTGCCGGCAATGCTGTTCGTCTAAGCTTTTTTTCTGGTTGCACGGCCTTTTGGTTGCCCATGCTTATACTGGTTGAAGATAGTGCTCAATTTCATCTCAGTTGTAGCTGTTTCTGAGATTTGTATTGTTATTATTTCATATCAGATTGTTGTCATATTGATTAATTGAATGAACATGCATGTCAAATGCATTTAAATCCATTATTGTGTTTTATGTGTANCTGCAAAAAAAAAAAAAAAAAA]

[+] EMBL AK071027             [ATTTTCACTTTCACTTTGACCAACCTAATCTTCCCCTTCTATCCTCTCCTCTCCTCTCCGTTGACAGCCGTCGACCCCTCCTCGCCATGGACCCCCGCTACCTCCAGGAGCTCGGCGCGCTCCTCCCCCGCGCGCGCGGTGTCACCCTCCCTCAGGTGTTCGTCGGCGGCCGCCACCTCGGCGGCGCCGAGGAGGTCCGCCGCCTCCACGAGTCCGGCGAGCTCCGACGCGTTGTAGCCGGCGCCGGCGCAACCGCCCTCGCCGCCTGCAGCCGGTGCGGTGGCGAGCGCTACGTGCTCTGCGGCAGCTGCAACGGCAGTCACAAGCGGTACAGCCTCAAGGAAGCAACAGTACGAGGTCGTCTTGCCCCTCCCCTCCTTCCTCTTCCCCTCTCCTAATGTTTCCTCTTCTTCTTTTGCATCTTGCTGATAGGGGCTAAGGGGATGGGGAGAGGGGTTGGGATGGGCTCCTGGCTGTTCTTTGCTGATGGGGCAAAGGGGATGTAGTCTTGTGGGGTGGAGGTAGAGGCCAAATCTTGTGTTTGTTCAGATCTGATGACAGTGAATGGATGTGATGTGAGATTTAGTGGCTGATTAGTTCGTGATGCAGTGCATATTCTGAAAATAGAGAATAATAAAATTGTAGAATGTAGATGCACATGATTTTTGCTTAGTGATGTTTGTAGCGGGATTTAGTATTTTAAAATTCGCTTCTTCAGTGGTGATTCTAATGACAGATTTTGTCTGCATTGGTTCCACAAGAATCTTTTTTTCCTAGAGGATGCTTGCTTATGCTTCAGCTCATGTCTTTCTGTAATCAAATACCATATTTTTGCCCTAGGCCTTTGTGTATGTATCTCAGTAATTGAAGTCTTGCATCTTTGGCCTGTAGGGCTGGGTGTATGTATATCAGTATTAAAGTTATGCTTCTAAGCTTTACTACTGACTGAGCAGCTACATCAAGATATGCAAGGATCCTTACAGATATTTTAGACAACCTGGAACAACATCGATCCAATTCTAAAGTCGATTTGGTATATTATATTTTTCTTCTTTGTGTAGACATCAACCATTGGTCGTGAAGACATCCGAGTCTCAGAGGACTGCAATATGATAGGTAAGGAAATTCTGATAGGATGTAATGGAGGTCATATCACAATTACTTCTGACAATGATGTTGCAGGAACGATTTAAGTGTAATCTCTTCGTCCCTTTACATTTTTTTCCAGGTTAGAAATCATAATTGGTGATGTGCTTACACTAATGTTTCCGATATTACAGTTCGTCAATACCATTACAAATAGTAGTTTGCATAGTACAATTCTTCATTGAACAATACCTAAGATTTTTGTAAAGGTAGTGTTTATGTTATTTGTTTACATATAGCTAGTTAGCACTAGATCATTAGCATTTCACTGGTTCAAGCCGAGGTTTTCTGAAATTTTTTGAAGTTACTCTCTGGTTGTCTTAGTAAATTCATCTATCTAGGCTATGTCTAATTGCTCTCTTTAGCATGAATACTATTGGGTGTCTTTGTAAGAACTAATTTGTACCTTTGGAACAATTAATGTGACCTACACTGCTTTAGTTCTAGGCTCCTGGCAAAGGTAAGCACTAGAAAGACATACCAGAACTAAGTAACAATGTATACTTCTTTCTTAATATCAGAACATAGTATTGATGTATGGGATTTTGATGTTGAATTTGTTTTGTGAATCATCAGATCCTTCACCTCCTGATGCTGCAGTCATATGGACTTCATTAGTTGAGCTAAGCAATTGGCAATTTCATGGAAAACTAGGAAGCACACTATAGCTAATGGTAAAAGCTGGGGTTACATCATGGCTGATGGCGATAGTGGCATCCATTTTAGAGTGATGAAGCTATCCCAGGATGAAAAACAGACAATGATTGATGGTTATTAAGTCCTTTTCTTTTTCCAGACTGCCGGCAATGCTGTTCGTCTAAGCTTTTTTTCTGGTTGCACGGCCTTTTGGTTGCCCATGCTTATACTGGTTGAAGATAGTGCTCAATTTCATCTCAGTTGTAGCTGTTTCTGAGATTTGTATTGTTATTATTTCATATCAGATTGTTGTCATATTGATTAATTGAATGAACATGCATGTCAAATGC                                                     ]
[-] EMBL CA761754             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TAATTGCTCTCTTTAGCATGAATACTATTGGGTGTCTTTGTAAGAACTAATTTGTACCTTTGGAACAATTAATGTGACCTACACTGCTTTAGTTCTAGGCTCCTGGCAAAGGTAAGCNCTAGAAAGGCATCCCAGAACTAAGTAACAATGTATACTTCTTTCTTAATATCAGAACATAGTATTGATGTATGGGATTTTGATGTTGAATTTGTTTTGTGAATCATCAGATCCTTCACCTCCTGATGCTGCAGTCATATGGACTTCATTAGTTGAGCTAAGCAATTGGCAATTTCATGGAAAACTAGGAAGCCCCCTATAGCTAATGGTAAAAGCTGGGGTTACATCATGGCTGATGGCGATAGTGGCATCCATTTTAGAGTGATGAAGCTATCCCAGGATGAAAAACAGACAATGATTGATGGTTATTAAGTCCTTTTCTTTTTCCAGACTGCCGGCAATGCTGTTTGTTTAAGCTTTTTTTCTGGTTGCACGGCCTTTTGGTTGCCCATGCTTATACTGGTTGAAGATAGTGCTCAATTTCATTTCAGTTGTAGCTGTTTTTGAGATTTGTATTGTTATTATTTCATATCAGATTGTTGTCATATTGATTAATTGAATGAACATGCATGTCAAATGCATTTAAATCCATTATTGTGTTTTATGTGTANCTGCAAAAAAAAAAAAAAAAAA]




>consensus_8503#0
ATTTTCACTTTCACTTTGACCAACCTAATCTTCCCCTTCTATCCTCTCCTCTCCTCTCCG
TTGACAGCCGTCGACCCCTCCTCGCCATGGACCCCCGCTACCTCCAGGAGCTCGGCGCGC
TCCTCCCCCGCGCGCGCGGTGTCACCCTCCCTCAGGTGTTCGTCGGCGGCCGCCACCTCG
GCGGCGCCGAGGAGGTCCGCCGCCTCCACGAGTCCGGCGAGCTCCGACGCGTTGTAGCCG
GCGCCGGCGCAACCGCCCTCGCCGCCTGCAGCCGGTGCGGTGGCGAGCGCTACGTGCTCT
GCGGCAGCTGCAACGGCAGTCACAAGCGGTACAGCCTCAAGGAAGCAACAGTACGAGGTC
GTCTTGCCCCTCCCCTCCTTCCTCTTCCCCTCTCCTAATGTTTCCTCTTCTTCTTTTGCA
TCTTGCTGATAGGGGCTAAGGGGATGGGGAGAGGGGTTGGGATGGGCTCCTGGCTGTTCT
TTGCTGATGGGGCAAAGGGGATGTAGTCTTGTGGGGTGGAGGTAGAGGCCAAATCTTGTG
TTTGTTCAGATCTGATGACAGTGAATGGATGTGATGTGAGATTTAGTGGCTGATTAGTTC
GTGATGCAGTGCATATTCTGAAAATAGAGAATAATAAAATTGTAGAATGTAGATGCACAT
GATTTTTGCTTAGTGATGTTTGTAGCGGGATTTAGTATTTTAAAATTCGCTTCTTCAGTG
GTGATTCTAATGACAGATTTTGTCTGCATTGGTTCCACAAGAATCTTTTTTTCCTAGAGG
ATGCTTGCTTATGCTTCAGCTCATGTCTTTCTGTAATCAAATACCATATTTTTGCCCTAG
GCCTTTGTGTATGTATCTCAGTAATTGAAGTCTTGCATCTTTGGCCTGTAGGGCTGGGTG
TATGTATATCAGTATTAAAGTTATGCTTCTAAGCTTTACTACTGACTGAGCAGCTACATC
AAGATATGCAAGGATCCTTACAGATATTTTAGACAACCTGGAACAACATCGATCCAATTC
TAAAGTCGATTTGGTATATTATATTTTTCTTCTTTGTGTAGACATCAACCATTGGTCGTG
AAGACATCCGAGTCTCAGAGGACTGCAATATGATAGGTAAGGAAATTCTGATAGGATGTA
ATGGAGGTCATATCACAATTACTTCTGACAATGATGTTGCAGGAACGATTTAAGTGTAAT
CTCTTCGTCCCTTTACATTTTTTTCCAGGTTAGAAATCATAATTGGTGATGTGCTTACAC
TAATGTTTCCGATATTACAGTTCGTCAATACCATTACAAATAGTAGTTTGCATAGTACAA
TTCTTCATTGAACAATACCTAAGATTTTTGTAAAGGTAGTGTTTATGTTATTTGTTTACA
TATAGCTAGTTAGCACTAGATCATTAGCATTTCACTGGTTCAAGCCGAGGTTTTCTGAAA
TTTTTTGAAGTTACTCTCTGGTTGTCTTAGTAAATTCATCTATCTAGGCTATGTCTAATT
GCTCTCTTTAGCATGAATACTATTGGGTGTCTTTGTAAGAACTAATTTGTACCTTTGGAA
CAATTAATGTGACCTACACTGCTTTAGTTCTAGGCTCCTGGCAAAGGTAAGCACTAGAAA
GACATACCAGAACTAAGTAACAATGTATACTTCTTTCTTAATATCAGAACATAGTATTGA
TGTATGGGATTTTGATGTTGAATTTGTTTTGTGAATCATCAGATCCTTCACCTCCTGATG
CTGCAGTCATATGGACTTCATTAGTTGAGCTAAGCAATTGGCAATTTCATGGAAAACTAG
GAAGCACACTATAGCTAATGGTAAAAGCTGGGGTTACATCATGGCTGATGGCGATAGTGG
CATCCATTTTAGAGTGATGAAGCTATCCCAGGATGAAAAACAGACAATGATTGATGGTTA
TTAAGTCCTTTTCTTTTTCCAGACTGCCGGCAATGCTGTTCGTCTAAGCTTTTTTTCTGG
TTGCACGGCCTTTTGGTTGCCCATGCTTATACTGGTTGAAGATAGTGCTCAATTTCATCT
CAGTTGTAGCTGTTTCTGAGATTTGTATTGTTATTATTTCATATCAGATTGTTGTCATAT
TGATTAATTGAATGAACATGCATGTCAAATGCATTTAAATCCATTATTGTGTTTTATGTG
TANCTGCAAAAAAAAAAAAAAAAAA

consensusID : consensus_8503#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 993
fasta sequence 
                              [CCCCATGTGGCTGCCCTGGGTGAAGACGCGCCCCTCCTCCCCTTCCTCCGCCGCCGCCTCCCCCTCGCCCTCCACCGCGCTCGCCGCCGCCGCCGCCTCTCCTCGCTTGTCCTTCTCCTCTCCCTCCCTCAAGGACCTCCAGGCTCTCCTCCTCTCCGACCACTCGCCCTCCCCGACGCCGCCGCAGCTGCCGCCCAACACCGCCCCCTGCTCCCCCTCCGTCCGCGTCTTCCACCGCGTCCGAGTCGCCGCCTCCGCCCTCCGCGCGCTCCGCACCCTCCAGGCGCCGCACGCCGCCGTGGCCGAGGCCGACCGCCGGGTGGTGCTCTACTTCACCTCCCTCCACGTCGTCCGCTCCACGTATGAGGACTGCCGCGCCGTGCGCGCCATCCTGCGCGGCCTCCGGGCCTCCGTCGACGAGCGGGACCTCGCCATGGACCCCCGCTACCTCCAGGAGCTCGGCGCGCTCCTCCCCCGCGCGCGCGGTGTCACCCTCCCTCAGGTCTTCGTCGGCGGCCGCCACCTCGGCGGCGCCGAGGAGGTCCGCCGCCTCCACGAGTCCGGCGAGCTCCGACGCGTCGTAGCCGGCGCCGGCGCAACCGCCTTCGCCGCCTGCAGCCGGTGCGGCGGCGAGCGCTACGTGCTCTGCGGCAGCTGCAACGGCAGCCACAAGCGGTACAGCCTCAAGGGCGGCGGCGGCTTCCGCACCTGCGCCGGCTGCAACGAGAATGGCCTCGTCCGGTGCCCGGACTGCTCCCCGCCGGCCGTCTGATCCAGATCCAAAGGTCACAATCTCATGACTACTAGATTTTAATGTTTTTTTAGCTCAAACTTGAGATATGAAATGAGCTGTGTGTGTAGCTGTTACTCCTACTACTTGTTATTATTGTAGTGGTGTTTTTGTGTGTGACAGTGCCCAATTGAAACTTCCAAGTTCTTAGCATTTGCTAACCAACGTTTCTAATGTTTGATTAGGATTTAGTAAAAGAGTTG]

[+] EMBL AK109566             [CCCCATGTGGCTGCCCTGGGTGAAGACGCGCCCCTCCTCCCCTTCCTCCGCCGCCGCCTCCCCCTCGCCCTCCACCGCGCTCGCCGCCGCCGCCGCCTCTCCTCGCTTGTCCTTCTCCTCTCCCTCCCTCAAGGACCTCCAGGCTCTCCTCCTCTCCGACCACTCGCCCTCCCCGACGCCGCCGCAGCTGCCGCCCAACACCGCCCCCTGCTCCCCCTCCGTCCGCGTCTTCCACCGCGTCCGAGTCGCCGCCTCCGCCCTCCGCGCGCTCCGCACCCTCCAGGCGCCGCACGCCGCCGTGGCCGAGGCCGACCGCCGGGTGGTGCTCTACTTCACCTCCCTCCACGTCGTCCGCTCCACGTATGAGGACTGCCGCGCCGTGCGCGCCATCCTGCGCGGCCTCCGGGCCTCCGTCGACGAGCGGGACCTCGCCATGGACCCCCGCTACCTCCAGGAGCTCGGCGCGCTCCTCCCCCGCGCGCGCGGTGTCACCCTCCCTCAGGTCTTCGTCGGCGGCCGCCACCTCGGCGGCGCCGAGGAGGTCCGCCGCCTCCACGAGTCCGGCGAGCTCCGACGCGTCGTAGCCGGCGCCGGCGCAACCGCCTTCGCCGCCTGCAGCCGGTGCGGCGGCGAGCGCTACGTGCTCTGCGGCAGCTGCAACGGCAGCCACAAGCGGTACAGCCTCAAGGGCGGCGGCGGCTTCCGCACCTGCGCCGGCTGCAACGAGAATGGCCTCGTCCGGTGCCCGGACTGCTCCCCGCCGGCCGTCTGATCCAGATCCAAAGGTCACAATCTCATGACTACTAGATTTTAATGTTTTTTTAGCTCAAACTTGAGATATGAAATGAGCTGTGTGTGTAGCTGTTACTCCTACTACTTGTTATTATTGTAGTGGTGTTTTTGTGTGTGACAGTGCCCAATTGAAACTTCCAAGTTCTTAGCATTTGCTAACCAACGTTTCTAATGTTTGATTAGGATTTAGTAAAAGAGTTG]
[+] EMBL AU176492             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTCCGCCGCCTCCACGAGTCCGGCGAGCTCCGACGCGTCGTAGCCGGCGCCGGCGCAACCGCCTTCGCCGCCTGCAGCCGGTGCGGCGGCGAGCGCTACGTGCTCTGCGGCAGCTGCAACGGNAGCCACAAGCGGTACAGCCTCAAGGGCGGCGGCGGCTTCCGCACCTGCGCCGGCTGCAACGAGAATGGCCTCGTCCGGTGCCCGGACTGCTCCCCGCCGGCCGTCTGATCCAGATCCAAAGGTCACAATCTCATGACTACTAGATTTTAATGTTTTTT                                                                                                                                                                           ]




>consensus_8503#1
CCCCATGTGGCTGCCCTGGGTGAAGACGCGCCCCTCCTCCCCTTCCTCCGCCGCCGCCTC
CCCCTCGCCCTCCACCGCGCTCGCCGCCGCCGCCGCCTCTCCTCGCTTGTCCTTCTCCTC
TCCCTCCCTCAAGGACCTCCAGGCTCTCCTCCTCTCCGACCACTCGCCCTCCCCGACGCC
GCCGCAGCTGCCGCCCAACACCGCCCCCTGCTCCCCCTCCGTCCGCGTCTTCCACCGCGT
CCGAGTCGCCGCCTCCGCCCTCCGCGCGCTCCGCACCCTCCAGGCGCCGCACGCCGCCGT
GGCCGAGGCCGACCGCCGGGTGGTGCTCTACTTCACCTCCCTCCACGTCGTCCGCTCCAC
GTATGAGGACTGCCGCGCCGTGCGCGCCATCCTGCGCGGCCTCCGGGCCTCCGTCGACGA
GCGGGACCTCGCCATGGACCCCCGCTACCTCCAGGAGCTCGGCGCGCTCCTCCCCCGCGC
GCGCGGTGTCACCCTCCCTCAGGTCTTCGTCGGCGGCCGCCACCTCGGCGGCGCCGAGGA
GGTCCGCCGCCTCCACGAGTCCGGCGAGCTCCGACGCGTCGTAGCCGGCGCCGGCGCAAC
CGCCTTCGCCGCCTGCAGCCGGTGCGGCGGCGAGCGCTACGTGCTCTGCGGCAGCTGCAA
CGGCAGCCACAAGCGGTACAGCCTCAAGGGCGGCGGCGGCTTCCGCACCTGCGCCGGCTG
CAACGAGAATGGCCTCGTCCGGTGCCCGGACTGCTCCCCGCCGGCCGTCTGATCCAGATC
CAAAGGTCACAATCTCATGACTACTAGATTTTAATGTTTTTTTAGCTCAAACTTGAGATA
TGAAATGAGCTGTGTGTGTAGCTGTTACTCCTACTACTTGTTATTATTGTAGTGGTGTTT
TTGTGTGTGACAGTGCCCAATTGAAACTTCCAAGTTCTTAGCATTTGCTAACCAACGTTT
CTAATGTTTGATTAGGATTTAGTAAAAGAGTTG

consensusID : consensus_8503#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 541
fasta sequence 
                              [GGACCCCCGCTACCTCCAGGAGCTCGGCGCGCTCCTCCCCCGCGCGCGCGGTGTCACCCTCCTTCAGGTGTTCGTCGGCGGCCGCCACCTCGGCGGCGCCGAGGAGGTCCGCCGCCTCCACAAGTCCGGCGAGCTCCGACGCGTTGTAGCCGGCGCCGGCGCCGGCGCCGGCGCAACCGCCCTCGCCGCCTGCAGCCGGTGCGGTGGCGANTGCTACGTGCTCTGCGGCAGCTGCAACGGCAGCCACAAGCGGTACAGCCTCAAGGAAGCAACAGTACGAGGTCGTCTTGGCCCTCCCCTCCTTCCTCTTCCCCTCTCCTAATGTTTCATCTTCTTCTTCTTTTGCATCTTGCTGATAGGGGCTAANGGGATGGGGANANGGGTTGGGATGGGCTCCTGGCTGTTCTTTGCTGATGGGGCAAAGGGGATGTANTCTTGTGGGGTGGANGTANANGCCGAATCTTATGTTTGTTCAGATCTGATGACAGTGAATGGATGTGATGTGAGATTTAATGGCTCATTAATTTCGTGATGCANTGCA]

[+] EMBL AF074764             [GGACCCCCGCTACCTCCAGGAGCTCGGCGCGCTCCTCCCCCGCGCGCGCGGTGTCACCCTCCTTCAGGTGTTCGTCGGCGGCCGCCACCTCGGCGGCGCCGAGGAGGTCCGCCGCCTCCACAAGTCCGGCGAGCTCCGACGCGTTGTAGCCGGCGCCGGCGCCGGCGCCGGCGCAACCGCCCTCGCCGCCTGCAGCCGGTGCGGTGGCGANTGCTACGTGCTCTGCGGCAGCTGCAACGGCAGCCACAAGCGGTACAGCCTCAAGGAAGCAACAGTACGAGGTCGTCTTGGCCCTCCCCTCCTTCCTCTTCCCCTCTCCTAATGTTTCATCTTCTTCTTCTTTTGCATCTTGCTGATAGGGGCTAANGGGATGGGGANANGGGTTGGGATGGGCTCCTGGCTGTTCTTTGCTGATGGGGCAAAGGGGATGTANTCTTGTGGGGTGGANGTANANGCCGAATCTTATGTTTGTTCAGATCTGATGACAGTGAATGGATGTGATGTGAGATTTAATGGCTCATTAATTTCGTGATGCANTGCA]




>consensus_8503#2
GGACCCCCGCTACCTCCAGGAGCTCGGCGCGCTCCTCCCCCGCGCGCGCGGTGTCACCCT
CCTTCAGGTGTTCGTCGGCGGCCGCCACCTCGGCGGCGCCGAGGAGGTCCGCCGCCTCCA
CAAGTCCGGCGAGCTCCGACGCGTTGTAGCCGGCGCCGGCGCCGGCGCCGGCGCAACCGC
CCTCGCCGCCTGCAGCCGGTGCGGTGGCGANTGCTACGTGCTCTGCGGCAGCTGCAACGG
CAGCCACAAGCGGTACAGCCTCAAGGAAGCAACAGTACGAGGTCGTCTTGGCCCTCCCCT
CCTTCCTCTTCCCCTCTCCTAATGTTTCATCTTCTTCTTCTTTTGCATCTTGCTGATAGG
GGCTAANGGGATGGGGANANGGGTTGGGATGGGCTCCTGGCTGTTCTTTGCTGATGGGGC
AAAGGGGATGTANTCTTGTGGGGTGGANGTANANGCCGAATCTTATGTTTGTTCAGATCT
GATGACAGTGAATGGATGTGATGTGAGATTTAATGGCTCATTAATTTCGTGATGCANTGC
A

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8503#0      ATTTTCACTTTCACTTTGACCAACCTAATCTTCCCCTTCTATCCTCTCCTCTCCTCTCCG 60
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      --------------------------------------------CCCCATGTGGCTGCCC 16
                                                                                  

consensus_8503#0      TTGACAGCCGTCGACCCCTCCTCGCCATGGACCCCCGCTACCTCCAGGAGCTCGGCGCGC 120
consensus_8503#2      ----------------------------GGACCCCCGCTACCTCCAGGAGCTCGGCGCGC 32
consensus_8503#1      TGGGTGAAGACGCGCCCCTCCTCCCCTTCCTCCGCCGCCGCCTCCCC---CTCGCCCTCC 73
                                                     ** ****  *****     **** *   *

consensus_8503#0      TCCTCCCCCGCGCGCGCGGTGTCACCCTCCCTCAGGTGTTCGTCGGCGGCCGCCACCTCG 180
consensus_8503#2      TCCTCCCCCGCGCGCGCGGTGTCACCCTCCTTCAGGTGTTCGTCGGCGGCCGCCACCTCG 92
consensus_8503#1      ACCGCGCTCGC-CGC-CGCCGCCGCCTCTCCTCGCTTGTCCTTCTCCTCTCCCTCCCTCA 131
                       ** * * *** *** **  * * **   * **   *** * **  *   * *  **** 

consensus_8503#0      GCGGCGCCGAGGAGGTCCGCCGCCTCCACGAGTCCGGCGAGCTCCGACGC-GTTGTAGCC 239
consensus_8503#2      GCGGCGCCGAGGAGGTCCGCCGCCTCCACAAGTCCGGCGAGCTCCGACGC-GTTGTAGCC 151
consensus_8503#1      AGGACCTCCAGGCTCTCCTCCTCTCCGACCACTC--GCCCTCCCCGACGCCGCCGCAGCT 189
                        * *  * ***   *** ** *  * ** * **  **   * ******* *  * *** 

consensus_8503#0      GGCGCC-GGCGC------------AACCGCCCTCGCCGCCTGCAGCCGGTGCGGTGGCGA 286
consensus_8503#2      GGCGCC-GGCGCCGGCGCCGGCGCAACCGCCCTCGCCGCCTGCAGCCGGTGCGGTGGCGA 210
consensus_8503#1      GCCGCCCAACACCGCCCCCTGCTCCCCCTCCGTCCGCGTCTTCCACCGCGTCCGAGTCGC 249
                      * ****   * *              ** ** **  ** ** *  ***   * * * ** 

consensus_8503#0      GCGCTACGTGCTCTGCGGCAGCTGCAACGGCAGTCACAAGCGGTACAGCCTCAAGGAAGC 346
consensus_8503#2      NTGCTACGTGCTCTGCGGCAGCTGCAACGGCAGCCACAAGCGGTACAGCCTCAAGGAAGC 270
consensus_8503#1      CGCCTCCGCCCTCCGCGCGCTCCGCACCCTC---CAGGCGCCGCACGCCGCCGTGGCCGA 306
                         ** **  *** ***    * *** *  *   **   ** * **  *  *  **  * 

consensus_8503#0      AACAGTACG--AGGTCGTCTTGCCCCTCCCCTCCTTCCTCTTC-CCCTCTCCTAATGTTT 403
consensus_8503#2      AACAGTACG--AGGTCGTCTTGGCCCTCCCCTCCTTCCTCTTC-CCCTCTCCTAATGTTT 327
consensus_8503#1      GGCCGACCGCCGGGTGGTGCTCTACTTCACCTCCCTCCACGTCGTCCGCTCCACGTATGA 366
                        * *  **   *** **  *   * ** ***** *** * **  ** ****   * *  

consensus_8503#0      C---CTCTTCTTCTTTTGCATCTTGCTGATAGGGGCTAAGGGGATGGGGAGAGGGGTTGG 460
consensus_8503#2      CATCTTCTTCTTCTTTTGCATCTTGCTGATAGGGGCTAANGGGATGGGGANANGGGTTGG 387
consensus_8503#1      GGACTGCCGCGCCGTGCGCGCCATCCTG-CGCGGCCTCCGGGCCTCCGTCGACGAGCGGG 425
                            *  *  * *  **  * * ***    ** **   **  *  *   * * *  **

consensus_8503#0      GATGGGCTCCTGGCTGTTCTTTGCTGATGGGGCAAAGGGGATGTAGTCTTGTGGGGTGGA 520
consensus_8503#2      GATGGGCTCCTGGCTGTTCTTTGCTGATGGGGCAAAGGGGATGTANTCTTGTGGGGTGGA 447
consensus_8503#1      ACCTCGCCATGGACCCCCGCTACCTCCAGGAGCTCGGCGCGCTCCTCCCCCGCGCGCGCG 485
                           **    * *      *  **   ** **   * *        *     * * *  

consensus_8503#0      GGTAGAGGCCAAATCTTGTGTTTGTTCAGATCTG--ATGACAGTGA-ATGGATGTGATGT 577
consensus_8503#2      NGTANANGCCGAATCTTATGTTTGTTCAGATCTG--ATGACAGTGA-ATGGATGTGATGT 504
consensus_8503#1      GTGTCACCCTCCCTCAGGTCTTCGTCGGCGGCCGCCACCTCGGCGGCGCCGAGGAGGTCC 545
                           *  *    **   * ** **      * *  *   * * *     ** * * *  

consensus_8503#0      GAGATTTA---GTGGCTGATTAGTT-CGTGATGCAGT-GCATATTCTGAAAATAGAGAAT 632
consensus_8503#2      GAGATTTA---ATGGCTCATTAATTTCGTGATGCANT-GCA------------------- 541
consensus_8503#1      GCCGCCTCCACGAGTCCGGCGAGCTCCGACGCGTCGTAGCCGGCGCCGGCGCAACCGCCT 605
                      *     *      * *     *  * **    *   * **                    

consensus_8503#0      AATAAAATTGTAG--AATGTAGATGCACATGATTTTTGCTTAGTGATGTTTGTAGCGGGA 690
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      TCGCCGCCTGCAGCCGGTGCGGCGGCGAGCGCTACGTGCTCTGCGGCAGCTGCAACGGCA 665
                                                                                  

consensus_8503#0      TTTAGTATTTTAAAATTCGCTTCTTCAGTGGTGATTCTAATGACAGATTTTGTCTGCATT 750
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      GCCA------CAAGCGGTACAGCCTCAAGGGCGGCGGCGGCTTCCGCACCTGCGCCGGCT 719
                                                                                  

consensus_8503#0      GGTTCCACAAGAATCTTTTTTTCCTAGAGGATGCTTGCTTATGCTTCAGCTCATGTCTTT 810
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      GCAACGAGAATGGCCTCGTCCGGTGCCCGGACTGCTCCCCGCCGGCCGTCTGATCCAGAT 779
                                                                                  

consensus_8503#0      CTGTAATCAAATACCATATTTTTGCCCTAGGCCTTTGTGTATGTATCTCAGTAATTGAAG 870
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      CCAAAGGTCACAATCTCATGACTACTAGATTTTAATGTTTTTTTAGCTCAA-ACTTGAGA 838
                                                                                  

consensus_8503#0      TCTTGCATCTTTGGCCTGTAGGGCTGGGTGTA----TGTATATCAGTATTAAAGTTATGC 926
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      TATGAAATGAGCTGTGTGTGTAGCTGTTACTCCTACTACTTGTTATTATTGTAGTGGTGT 898
                                                                                  

consensus_8503#0      TTCTAAGCTTTACTACTGACTGAGCAGCTACATCAAGATATGCAAGGATCCTTACAGATA 986
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      TTTTGTGTGTGAC-AGTGCCCAATTGAAACTTCCAAGTTCTTAGCATTTGCTAACCAACG 957
                                                                                  

consensus_8503#0      TTTTAGACAACCTGGAACAACATCGATCCAATTCTAAAGTCGATTTGGTATATTATATTT 1046
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      TTTCTAATG--TTTGATTAG----GATTTAGTAAAAGAGTTG------------------ 993
                                                                                  

consensus_8503#0      TTCTTCTTTGTGTAGACATCAACCATTGGTCGTGAAGACATCCGAGTCTCAGAGGACTGC 1106
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      AATATGATAGGTAAGGAAATTCTGATAGGATGTAATGGAGGTCATATCACAATTACTTCT 1166
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      GACAATGATGTTGCAGGAACGATTTAAGTGTAATCTCTTCGTCCCTTTACATTTTTTTCC 1226
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      AGGTTAGAAATCATAATTGGTGATGTGCTTACACTAATGTTTCCGATATTACAGTTCGTC 1286
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      AATACCATTACAAATAGTAGTTTGCATAGTACAATTCTTCATTGAACAATACCTAAGATT 1346
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      TTTGTAAAGGTAGTGTTTATGTTATTTGTTTACATATAGCTAGTTAGCACTAGATCATTA 1406
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      GCATTTCACTGGTTCAAGCCGAGGTTTTCTGAAATTTTTTGAAGTTACTCTCTGGTTGTC 1466
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      TTAGTAAATTCATCTATCTAGGCTATGTCTAATTGCTCTCTTTAGCATGAATACTATTGG 1526
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      GTGTCTTTGTAAGAACTAATTTGTACCTTTGGAACAATTAATGTGACCTACACTGCTTTA 1586
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      GTTCTAGGCTCCTGGCAAAGGTAAGCACTAGAAAGACATACCAGAACTAAGTAACAATGT 1646
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      ATACTTCTTTCTTAATATCAGAACATAGTATTGATGTATGGGATTTTGATGTTGAATTTG 1706
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      TTTTGTGAATCATCAGATCCTTCACCTCCTGATGCTGCAGTCATATGGACTTCATTAGTT 1766
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      GAGCTAAGCAATTGGCAATTTCATGGAAAACTAGGAAGCACACTATAGCTAATGGTAAAA 1826
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      GCTGGGGTTACATCATGGCTGATGGCGATAGTGGCATCCATTTTAGAGTGATGAAGCTAT 1886
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      CCCAGGATGAAAAACAGACAATGATTGATGGTTATTAAGTCCTTTTCTTTTTCCAGACTG 1946
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      CCGGCAATGCTGTTCGTCTAAGCTTTTTTTCTGGTTGCACGGCCTTTTGGTTGCCCATGC 2006
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      TTATACTGGTTGAAGATAGTGCTCAATTTCATCTCAGTTGTAGCTGTTTCTGAGATTTGT 2066
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      ATTGTTATTATTTCATATCAGATTGTTGTCATATTGATTAATTGAATGAACATGCATGTC 2126
consensus_8503#2      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      AAATGCATTTAAATCCATTATTGTGTTTTATGTGTANCTGCAAAAAAAAAAAAAAAAAA 2185
consensus_8503#2      -----------------------------------------------------------
consensus_8503#1      -----------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)