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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8505#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2553 fasta sequence
[GCCGCGCCGTTGCTGTCGCTCTGCCTATATAAACCGGCATGATCGCGAGAGGAGCACACAAGGCGTAAGCGCTGCGCACCTAGGCAGCAATATGCCCTAGCGACGCATACACATGTACCCACATAGGAGTATTTACATAGAGAGAGAGACGAAGTGAGATCGAAAGAGATAAAAAATGAAGATAATGCATAATTAGATGATGCGTATCCCGCAGATGGGCGATCTGTACCTGTAGCAGCAGGCGCTGATGGCATCTCTATCGGTGAGTCCTAAACAACAAGCTGATCTTGTTCTCCGTCAAGCTGTTTATCCTATATAACACAACAACGCCGTAGTGCTGTGCAGATATATGCATAGCCCGTCATTATCTCCTAGAGGGAGCAAATATACACCGTAGCATTGTGCAGTTTTGCAGCCCGGACGGTAAAACAATAAAGTGAAGCACAGACGAATATGTTGTGGATGTATTGTGAACTTAGCCATAGATATAAGTATCCCTAGTGGCACATACACACGCACACGTCATCTTTGTCAAGCGATTAATATGGGCTGCAAACAAATATGAGGTGAACCTAATCCTTCTGGGGGTTGGGCCGTCTAAATTATCAAAATATCAAATATTGGATGTAGATATTTATTTGTATATACTTGGGATGAGTTTGAGTCTTATTGGCATCGGACCAACCATGATTTATACATATCTAAAGTCTTCAAACCTGCCCGAGAATGTAGCGCCCACGGTGTTTTGCCCTGGTGTGGCCCTTGCCGGGTCGCGACACGTCAGCGTGCGCTGGAGGGCGGGTGGATTTCGCGGCTTCTCGTGTGTCTGCGTTGGCCCTCGTATTTTTGCACAAAAGCCCTTCTTTTTATTGATAATTTGTTTTAGGTACATGCTCTTTAGTTTGTACGGTGTTCTGTGTTCTTATGTACAGGGCCTCTACAAACTGTAATATTGTATGAAAAGAAGAGAAAATTTGGAAAAGAGGAGCGCGCTCTGAATAACATAAAGTGAGTTCATATTCATTCTGGAAGAGTTACATATTTGCCTCGTGCATGCCTCGTGCATGTCATGTACGGGAGTAATTCCTTCTCTCTCCAAATTCTACCAGATGGATGGTCTTAATCTATCTCAATGATTAAAGTCAGATTGATGAGAGCCGAAACACGGCTATGATCAAACTGCATTTATATAATCAATGGTATTAGGCTGGTCCGGCCCTCATTGGCGATTGGATCATCTGAGTGCCATTTGATATTTTCTATGATTAAAACTAGACGCCTGGTCTTCATTGGAGATCGGATCGTCTATCGGTTACTATGATACCAATAACAATGGTACTAGATATGTCCAGCCCCCATTGGTGATCGGACTGTCTAGGCGTTGTTTTCATAATTAAAATATATTTTGCCCCCATGCATATGCACAGGAGCTGTTCTTGACTCATGCATACGCCAACTACGGAGGCGTTGCGTCCGAGACCGACGAGGTTGGGCGACGTATTGGCTTAAGCTAACAAGGCTACAGCCATTCATTTGTTTCATTGTGTATGACCGACGAGGCTTGACGAAACCATGGCCGAGTGCTGACAAGGCCAGGTCATTATTATATTAACACGTCTAAAATGGATGGAAACCGGATACGCCGTTGCTGGACACTAACGAGGCAAAAGCAACCATAAAATCCATGTTTGATGAAAGCCAAGATACATGAGTGGGCGCTGACGAGGCAAAGGTCACCCGCTCCACCAGATTCCCTCCACACACCGACGTGACAGTAGTGTACTGTGACTGGGTTTTGGCGAAACAAAGCCATCCATTCTACATTCACTATATTCACCGTTAAATCTGCACCAACCTCAATCTTCGGCGAGCAAATAAATTTGAAGACGACGATCACAAAGCGCAGCTTAATCGGAGGTGTTCCATAGGCTCATCCTTTGGATGTAATTAATCGGTAGTTTTCTATTAAGCATTCCTCGCGAAGGCAAAAGGCTAACTCCTGCGGGAGCCCTCATGTTTTTGTAAACATTCATGTTAATGAATCATGATTAATAAAATACAAGGTTTCCCTATTTTCTGTGTGTTCATTGTTTTGTTTTCGTCAAACACAGAATACCAAATTAACTTAAATTGATTTGCATGGGTTGATTTGATTTGTGAATCAGCTTGGTTCTTGCCGATGGGGGTGCACAGGTTGGAGAGGCAAGTGGTGCCACATTTCTTCTCCAGAGGAAGTTTAATAATATAGCCAACTATTGCTTCAAAAATTAAAACACATCTCTATCTCTACTACTACTTAAAAAGTTAGAGGTGCTTTCGTCGTCCGTAAAAATAAAATAAAGGGCGAAAAAATTGAATCTTTATATACGATGCGGTAAAAAAAACAGTCATCAGTGTCCATGAAAAAAAAGATCCGATTAGTCCGTCCGTTAAAATAAAAAGATGAGATGCGTCCGTGAAAAGAAAAGATCCGATTAGTCAGTCCGTTAAAATAAAAGGAAAGGGCGACAAAAAGATCCGATTCTATGCGTGCGGGAAAAAAAAACGGTCCGT]
[+] EMBL AK064278 [GCCGCGCCGTTGCTGTCGCTCTGCCTATATAAACCGGCATGATCGCGAGAGGAGCACACAAGGCGTAAGCGCTGCGCACCTAGGCAGCAATATGCCCTAGCGACGCATACACATGTACCCACATAGGAGTATTTACATAGAGAGAGAGACGAAGTGAGATCGAAAGAGATAAAAAATGAAGATAATGCATAATTAGATGATGCGTATCCCGCAGATGGGCGATCTGTACCTGTAGCAGCAGGCGCTGATGGCATCTCTATCGGTGAGTCCTAAACAACAAGCTGATCTTGTTCTCCGTCAAGCTGTTTATCCTATATAACACAACAACGCCGTAGTGCTGTGCAGATATATGCATAGCCCGTCATTATCTCCTAGAGGGAGCAAATATACACCGTAGCATTGTGCAGTTTTGCAGCCCGGACGGTAAAACAATAAAGTGAAGCACAGACGAATATGTTGTGGATGTATTGTGAACTTAGCCATAGATATAAGTATCCCTAGTGGCACATACACACGCACACGTCATCTTTGTCAAGCGATTAATATGGGCTGCAAACAAATATGAGGTGAACCTAATCCTTCTGGGGGTTGGGCCGTCTAAATTATCAAAATATCAAATATTGGATGTAGATATTTATTTGTATATACTTGGGATGAGTTTGAGTCTTATTGGCATCGGACCAACCATGATTTATACATATCTAAAGTCTTCAAACCTGCCCGAGAATGTAGCGCCCACGGTGTTTTGCCCTGGTGTGGCCCTTGCCGGGTCGCGACACGTCAGCGTGCGCTGGAGGGCGGGTGGATTTCGCGGCTTCTCGTGTGTCTGCGTTGGCCCTCGTATTTTTGCACAAAAGCCCTTCTTTTTATTGATAATTTGTTTTAGGTACATGCTCTTTAGTTTGTACGGTGTTCTGTGTTCTTATGTACAGGGCCTCTACAAACTGTAATATTGTATGAAAAGAAGAGAAAATTTGGAAAAGAGGAGCGCGCTCTGAATAACATAAAGTGAGTTCATATTCATTCTGGAAGAGTTACATATTTGCCTCGTGCATGCCTCGTGCATGTCATGTACGGGAGTAATTCCTTCTCTCTCCAAATTCTACCAGATGGATGGTCTTAATCTATCTCAATGATTAAAGTCAGATTGATGAGAGCCGAAACACGGCTATGATCAAACTGCATTTATATAATCAATGGTATTAGGCTGGTCCGGCCCTCATTGGCGATTGGATCATCTGAGTGCCATTTGATATTTTCTATGATTAAAACTAGACGCCTGGTCTTCATTGGAGATCGGATCGTCTATCGGTTACTATGATACCAATAACAATGGTACTAGATATGTCCAGCCCCCATTGGTGATCGGACTGTCTAGGCGTTGTTTTCATAATTAAAATATATTTTGCCCCCATGCATATGCACAGGAGCTGTTCTTGACTCATGCATACGCCAACTACGGAGGCGTTGCGTCCGAGACCGACGAGGTTGGGCGACGTATTGGCTTAAGCTAACAAGGCTACAGCCATTCATTTGTTTCATTGTGTATGACCGACGAGGCTTGACGAAACCATGGCCGAGTGCTGACAAGGCCAGGTCATTATTATATTAACACGTCTAAAATGGATGGAAACCGGATACGCCGTTGCTGGACACTAACGAGGCAAAAGCAACCATAAAATCCATGTTTGATGAAAGCCAAGATACATGAGTGGGCGCTGACGAGGCAAAGGTCACCCGCTCCACCAGATTCCCTCCACACACCGACGTGACAGTAGTGTACTGTGACTGGGTTTTGGCGAAACAAAGCCATCCATTCTACATTCACTATATTCACCGTTAAATCTGCACCAACCTCAATCTTCGGCGAGCAAATAAATTTGAAGACGACGATCACAAAGCGCAGCTTAATCGGAGGTGTTCCATAGGCTCATCCTTTGGATGTAATTAATCGGTAGTTTTCTATTAAGCATTCCTCGCGAAGGCAAAAGGCTAACTCCTGCGGGAGCCCTCATGTTTTTGTAAACATTCATGTTAATGAATCATGATTAATAAAATACAAGGTTTCCCTATTTTCTGTGTGTTCATTGTTTTGTTTTCGTCAAACACAGAATACCAAATTAACTTAAATTGATTTGCATGGGTTGATTTGATTTGTGAATCAGCTTGGTTCTTGCCGATGGGGGTGCACAGGTTGGAGAGGCAAGTGGTGCCACATTTCTTCTCCAGAGGAAGTTTAATAATATAGCCAACTATTGCTTCAAAAATTAAAACACATCTCTATCTCTACTACTACTTAAAAAGTTAGAGGTGCTTTCGTCGTCCGTAAAAATAAAATAAAGGGCGAAAAAATTGAATCTTTATATACGATGCGGTAAAAAAAACAGTCATCAGTGTCCATGAAAAAAAAGATCCGATTAGTCCGTCCGTTAAAATAAAAAGATGAGATGCGTCCGTGAAAAGAAAAGATCCGATTAGTCAGTCCGTTAAAATAAAAGGAAAGGGCGACAAAAAGATCCGATTCTATGCGTGCGGGAAAAAAAAACGGTCCGT]
consensusID : consensus_8505#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1535 fasta sequence
[AGAAAACCCCCGACGCAGAGGCGGCTGGCAGAGGAGGAGACGTAGCAGGGCAACCCTGCTGCGTGCTCTGATCTGATCAATCACCCATACATCCAGAAGCCTATATCAATAGATACACAATCACACGCCGTCGCCGGCGTCGGGCGCTGCACAGCACGCAAGCCTGAGCCGGCGATGAACCTTAAACCACACGTACACGCACCCACAAATATTTGATTAGGAGCTTGATTCCGATTAGGCAAAAGGAGATTAAATTCCATCGGCGGCAATTCGCGAGGAGATTAATCATTGCCGGCGACGATTGTGCCGGTGTTCGTCATCAAGCTAATCTGCATGTGCTGCAGGCCTGATAAAACATCAGGGGAGCAAAAAGATCAGATGCACGCCGTAGTGCTGCGCAGTTGCGTGGCCCGGCTGACAGAAAAGTAAAGTGGAGTACTGATGAATATGTCAGCCATGGATATAAGTATCCCCAGCGGCGCATGCACACACACGTCATCTTTGTCAAGCGATTAATATGAGCTACAAATAAATACAAGGCGAGCCTGACCTTCGTGAGGGTTGGACCGTCTAAATTATCAATATCAAATATTGGATGTGGATATTTATTTATATATAAACTTGGGATGAGTTTGAGTCTTATTGGCATCAGACCAACCATGATTTATACATATTTATATTCATGCCGGATGAGTCACATATTGCCTCGTGCATGTCATGTACGGGAGCAATTCCTTCCCTCTCCAAATTCTACCGGATGGACGGGGGATATTCGCTAAATAAAATAACGCTAGCCATGAGGGCGAGGCGTGCAGATTTAAAACACACGTCGACATCTTGGCCGAGTGTTGACGAGATGAAATGGCTGGATTATCATTATTTATGCTATGTGTAAGACCGACGAGGCCGAACGACGTATTGGCTAAAGCTAGCAAGGCTACAGCTATTCATTCATTTCATTTGTCTATGACCGACGAGGCTAGACGAAACCATGGCCGAGTGCCGACAAGGCCAGGTCACTATACTATTAACACGTCTAAAACGGACGGGAACCGGATGCACCGTTGCTGGGCACCGACAAGGCAAAAGCAACAATAAAATCCATGTTTGATGAAGGCCGGGGTACATGACTGGGCACCGACGAGGCAAAGGTCACCCGCTTCACCAAATTCTCTCCGCACTCCGACGTGGTGGTAGTGTACTGTGACCGGGTTTTGGTGAAACAAAGCCATCCGTTCCACATTCACTGTATTCAACATTAAATCTGCACCAACCTCAACCTTCGGCGAGCAAACAACTTTGAAGACGACGATCATAAAGCGCAGCTTAATCGGAGGTATTACATAGGCTCGTCCTGTGGATGTAATTAACCGGTAGCCTCATTGTTAGGCGTCGGGAATCAACGGACTGCACGCAATCTCCAGTCAGCATACCTTTTCATTAAGCATTCCTCACGAAGGCAAAAGGCGAACTCCTGCGGGAGCTCTCATGTATTTGTAAACATTCATGTTAATGAATCATGATTAATAAAATAC]
[+] EMBL AK071227 [AGAAAACCCCCGACGCAGAGGCGGCTGGCAGAGGAGGAGACGTAGCAGGGCAACCCTGCTGCGTGCTCTGATCTGATCAATCACCCATACATCCAGAAGCCTATATCAATAGATACACAATCACACGCCGTCGCCGGCGTCGGGCGCTGCACAGCACGCAAGCCTGAGCCGGCGATGAACCTTAAACCACACGTACACGCACCCACAAATATTTGATTAGGAGCTTGATTCCGATTAGGCAAAAGGAGATTAAATTCCATCGGCGGCAATTCGCGAGGAGATTAATCATTGCCGGCGACGATTGTGCCGGTGTTCGTCATCAAGCTAATCTGCATGTGCTGCAGGCCTGATAAAACATCAGGGGAGCAAAAAGATCAGATGCACGCCGTAGTGCTGCGCAGTTGCGTGGCCCGGCTGACAGAAAAGTAAAGTGGAGTACTGATGAATATGTCAGCCATGGATATAAGTATCCCCAGCGGCGCATGCACACACACGTCATCTTTGTCAAGCGATTAATATGAGCTACAAATAAATACAAGGCGAGCCTGACCTTCGTGAGGGTTGGACCGTCTAAATTATCAATATCAAATATTGGATGTGGATATTTATTTATATATAAACTTGGGATGAGTTTGAGTCTTATTGGCATCAGACCAACCATGATTTATACATATTTATATTCATGCCGGATGAGTCACATATTGCCTCGTGCATGTCATGTACGGGAGCAATTCCTTCCCTCTCCAAATTCTACCGGATGGACGGGGGATATTCGCTAAATAAAATAACGCTAGCCATGAGGGCGAGGCGTGCAGATTTAAAACACACGTCGACATCTTGGCCGAGTGTTGACGAGATGAAATGGCTGGATTATCATTATTTATGCTATGTGTAAGACCGACGAGGCCGAACGACGTATTGGCTAAAGCTAGCAAGGCTACAGCTATTCATTCATTTCATTTGTCTATGACCGACGAGGCTAGACGAAACCATGGCCGAGTGCCGACAAGGCCAGGTCACTATACTATTAACACGTCTAAAACGGACGGGAACCGGATGCACCGTTGCTGGGCACCGACAAGGCAAAAGCAACAATAAAATCCATGTTTGATGAAGGCCGGGGTACATGACTGGGCACCGACGAGGCAAAGGTCACCCGCTTCACCAAATTCTCTCCGCACTCCGACGTGGTGGTAGTGTACTGTGACCGGGTTTTGGTGAAACAAAGCCATCCGTTCCACATTCACTGTATTCAACATTAAATCTGCACCAACCTCAACCTTCGGCGAGCAAACAACTTTGAAGACGACGATCATAAAGCGCAGCTTAATCGGAGGTATTACATAGGCTCGTCCTGTGGATGTAATTAACCGGTAGCCTCATTGTTAGGCGTCGGGAATCAACGGACTGCACGCAATCTCCAGTCAGCATACCTTTTCATTAAGCATTCCTCACGAAGGCAAAAGGCGAACTCCTGCGGGAGCTCTCATGTATTTGTAAACATTCATGTTAATGAATCATGATTAATAAAATAC]
consensusID : consensus_8505#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 619 fasta sequence
[TACACGCCGCCGCCAGGCGCTGCGCCAAGATGCAGGCCTGTGCTGGTGATGGTGAATATTATAGCCACACAAATATTTGGGAGGAATCAGGAGAAGGCAAAGTAATCGTCAACGTCAAGGAGTCTGCTTCATCGTCGCTGGTGCAACTCTAAATTAATCATTCGCCTTCCGTCGAGCCACGCTTCATCAACATAATTTCTTCGTCAAGCTATTTGTCATCGACAACACAACAGCGTCGTAGTACTGTGCAGATATTATGCATAGCCCGACATTATCTTCTAGAGGGAGCAAATATACACCGTAGGGTTGTGCAGTTGCACAGCCTGGACAGTAAAACAGTAAAGTGGAGTACTGGTGAATATGTCGCGGATGCGTTGTGAATTGTAGCCATGGATATAAGTATCCCCAGCGGCGCATGCAGACGCACACGTCATCTTTGTCAAGCGATTAATATGGGCCGCAAATAAATACAAGGCGAGCCTGACCCTCGTGAGGGTTGAACCGTCTAAATTATCAATATCAAATATTGGATGTAGATATTTATTTGTATAAACTTAGGATGAGTTTGAGTCTTATTGGCATCAGACCAACCATGATCTATACATATTTATATTCATGC]
[+] EMBL CA766069 [TACACGCCGCCGCCAGGCGCTGCGCCAAGATGCAGGCCTGTGCTGGTGATGGTGAATATTATAGCCACACAAATATTTGGGAGGAATCAGGAGAAGGCAAAGTAATCGTCAACGTCAAGGAGTCTGCTTCATCGTCGCTGGTGCAACTCTAAATTAATCATTCGCCTTCCGTCGAGCCACGCTTCATCAACATAATTTCTTCGTCAAGCTATTTGTCATCGACAACACAACAGCGTCGTAGTACTGTGCAGATATTATGCATAGCCCGACATTATCTTCTAGAGGGAGCAAATATACACCGTAGGGTTGTGCAGTTGCACAGCCTGGACAGTAAAACAGTAAAGTGGAGTACTGGTGAATATGTCGCGGATGCGTTGTGAATTGTAGCCATGGATATAAGTATCCCCAGCGGCGCATGCAGACGCACACGTCATCTTTGTCAAGCGATTAATATGGGCCGCAAATAAATACAAGGCGAGCCTGACCCTCGTGAGGGTTGAACCGTCTAAATTATCAATATCAAATATTGGATGTAGATATTTATTTGTATAAACTTAGGATGAGTTTGAGTCTTATTGGCATCAGACCAACCATGATCTATACATATTTATATTCATGC]
consensusID : consensus_8505#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 589 fasta sequence
[GGCAGCGGGCGGGCAGCCGGCAGCGGAGGAGCTCGCTCGGGCAGCCGGTGGCGGAGGCGGAGGTAGAAGGCGCTCTTCGACGACCTCCACCAACGCCCTCGTCGGCGCCGCCCCGCCCGCGACTGGGCGCCGCCCCTCCTAGGACCAGGTGATGCCCTCGACATGTCGAGCCACCGAACTCGCCTCGCCGGATCACCGCCCTCACCGCGATATGCCAGAGGTTATTTTGGTCATTTATGCAAAAACCTGACAGATCAATGGATGCTAACATCAGTGAACTCACGGTAGTGGCATGAGAGGGTGTGCAAATTTGATTCAATGGCATATAAGGAAAGAGCCAATTTTGTGTGGCATATCAGGGATCGGACCAAATTTCAATGGCATATAAGGGATTCTCTCTTCCATCAATGATGACCTTTTATCTTTGAAGGTTCTAATCGTGACACGTCATCACCAATGAGGATTGTTTGATGAAACATTTTGTTTGATGAAAACAACACATAGAAAATAGGGAAACCCTGTATTTTATTAATCACGATTCATTATCATGAATGTTTACAAATACATCAGGGCTCCCACAGGAGTTCGC]
[+] EMBL AK062400 [GGCAGCGGGCGGGCAGCCGGCAGCGGAGGAGCTCGCTCGGGCAGCCGGTGGCGGAGGCGGAGGTAGAAGGCGCTCTTCGACGACCTCCACCAACGCCCTCGTCGGCGCCGCCCCGCCCGCGACTGGGCGCCGCCCCTCCTAGGACCAGGTGATGCCCTCGACATGTCGAGCCACCGAACTCGCCTCGCCGGATCACCGCCCTCACCGCGATATGCCAGAGGTTATTTTGGTCATTTATGCAAAAACCTGACAGATCAATGGATGCTAACATCAGTGAACTCACGGTAGTGGCATGAGAGGGTGTGCAAATTTGATTCAATGGCATATAAGGAAAGAGCCAATTTTGTGTGGCATATCAGGGATCGGACCAAATTTCAATGGCATATAAGGGATTCTCTCTTCCATCAATGATGACCTTTTATCTTTGAAGGTTCTAATCGTGACACGTCATCACCAATGAGGATTGTTTGATGAAACATTTTGTTTGATGAAAACAACACATAGAAAATAGGGAAACCCTGTATTTTATTAATCACGATTCATTATCATGAATGTTTACAAATACATCAGGGCTCCCACAGGAGTTCGC]
consensusID : consensus_8505#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 428 fasta sequence
[CTATCTCTATCCCAATCTCTCCCCCCTCTCTCCCTTCTCCCTCCCCTCACAGGCAGCGGGCGGGCGAGGACGGGGGCAGGCAAAGCTGCTCGGGCACTGGCGGCGACGGCGGGCGGCTGGGACGGAGGCAGAGTGGGCGGCAGGCGACGGAGGCAGAGCTCCCTGGGCGGCTGAGGCGGAGCCGGAGCGGGCGGGCAGCCGGCAGCGGAGGAGCTCGCTCGGGCAGCCGGTGGCGGAGGCGGAGGTAGAAGGCGCTCTTCGACGACGCCGCGGGTAGCGGCGACGCCTCCTTCGTCTCCTCCCACTACAACCGCCGCGCGGACCACACCTACTCGTCGTCGTCATCCATGCGCGCGATGGCCGCCGGTATCGGGGAGGATGGGGGAAAGCGGCGGAAGTTGGGGACGAGACGCGCGATGGGTGCCGGT]
[+] EMBL AU184053 [CTATCTCTATCCCAATCTCTCCCCCCTCTCTCCCTTCTCCCTCCCCTCACAGGCAGCGGGCGGGCGAGGACGGGGGCAGGCAAAGCTGCTCGGGCACTGGCGGCGACGGCGGGCGGCTGGGACGGAGGCAGAGTGGGCGGCAGGCGACGGAGGCAGAGCTCCCTGGGCGGCTGAGGCGGAGCCGGAGCGGGCGGGCAGCCGGCAGCGGAGGAGCTCGCTCGGGCAGCCGGTGGCGGAGGCGGAGGTAGAAGGCGCTCTTCGACGACGCCGCGGGTAGCGGCGACGCCTCCTTCGTCTCCTCCCACTACAACCGCCGCGCGGACCACACCTACTCGTCGTCGTCATCCATGCGCGCGATGGCCGCCGGTATCGGGGAGGATGGGGGAAAGCGGCGGAAGTTGGGGACGAGACGCGCGATGGGTGCCGGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8505#0 GCCGCGCCGTTGCTGTCGCTCTGCCTATATAAACCGGCATGATCGCGAGAGGAGCACACA 60
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 -----------------------------AGAAAACCCCCGACGCAGAGGCGGCTGGCAG 31
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 AGGCGTAAGCGCTGCGCACCTAGGCAGCAATATGCCCTAGCGACGCATA-CACATGTACC 119
consensus_8505#2 ------------TACACGCC---GCCGCCAGGCGCTGCGCCAAGATGCA-GGCCTGTGCT 44
consensus_8505#1 AGGAGGAGACGTAGCAGGGCAACCCTGCTGCGTGCTCTGATCTGATCAATCACCCATACA 91
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 CACATAGGAGTATTTACATAGAGAGAGAGACGAAGTGAGATCGAAAGAGATAAAAAATGA 179
consensus_8505#2 GGTGATGGTGAATAT-TATAGCCACACAAATAT-------TTGGGAGGAATCAGGA--GA 94
consensus_8505#1 TCCAGAAGCCTATATCAATAGATACACAATCACA-CGCCGTCGCCGGCGTCGGGCGCTGC 150
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 -------------------------------------GGCAGCGGGCGGGCAGCCGGCAG 23
consensus_8505#0 AGATAATGCATAATTAGATGATGCGTATCCCGCAGATGGGCGATCTGTACCTGTAGCAGC 239
consensus_8505#2 AGGCAAAGTAATCGTCAACGTCAAGGAGTCTGCT------TCATCGTCGCTGGTGCAACT 148
consensus_8505#1 ACAGCACGCAAGCCTGAGCCGGCGATGAACCTTAAACCACACGTACACGCACCCACAAAT 210
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 CGGAGGAGCTCGCTCGGGCAGCCGGTGGCGGAGGCGGAGGTAGAAGGCGCTCTTCGACGA 83
consensus_8505#0 AGGCGCTGATGGCATCTCTATCGGTGAGTCCTAAA-CAAC--AAGCTGATC--TTGTTCT 294
consensus_8505#2 CTAAATTAATCATTCGCCTTCCGTCGAGCCACGCTTCATC--AACATAAT------TTCT 200
consensus_8505#1 ATTTGATTAGGAGCTTGATTCCGATTAGGCAAAAGGAGATTAAATTCCATCGGCGGCAAT 270
consensus_8505#4 -----------------------------CTATCTCTATCCCAATCTCTCC---CCCCTC 28
consensus_8505#3 CCTCCACCAACGCCCTCGTCGGCGCCGCCCCGCCCGCGACTGGGCGCCGCC---CCTCCT 140
*
consensus_8505#0 CCGTCAAGCTGTTTATCCTATATAAC-ACAACAACGCCGTAGT--GCTGTGCAGATAT-A 350
consensus_8505#2 TCGTCAAGCTATTTGTCATCGACAAC-ACAACAGCGTCGTAGT--ACTGTGCAGATATTA 257
consensus_8505#1 TCGCGAGGAGATTAATCATTGCCGGCGACGATTGTGCCGGTGTTCGTCATCAAGCTAATC 330
consensus_8505#4 TCTCCCTTCTCCCTCCCCTCACAGGCAGCGGGCGGGCGAGGAC--GGGGGCAGGCAAAGC 86
consensus_8505#3 AGGACCAGGTGATGCCCTCGACATGT--CGAGCCACCGAACTCGCCTCGCCGGATCACCG 198
* * *
consensus_8505#0 TGCATA---------GCCCGTCATTATCTCC------TAGAG-GGAGCAAATATACACCG 394
consensus_8505#2 TGCATA---------GCCCGACATTATCTTC------TAGAG-GGAGCAAATATACACCG 301
consensus_8505#1 TGCATGT-GCTGCAGGCCTGATAAAACATCAGGGGAGCAAAA-AGATCAGATGCACGCCG 388
consensus_8505#4 TGCTCGG-GC-----ACTGGCGGCGACGGCGGGCGGCTGGGACGGAGGCAGAGTGGGCGG 140
consensus_8505#3 CCCTCACCGCGATATGCCAGAGGTTATTTTGGTCATTTATGCAAAAACCTGACAGATCAA 258
* * * * * *
consensus_8505#0 TAGCATTGTGCAGTTTTGCAGCCCGGACGGTAAAACAATAAAGTGAAGCACAGACGAATA 454
consensus_8505#2 TAGGGTTGTGCAGTTGCACAGCCTGGACAGTAAAACAGTAAAGTGGAGTACTGGTGAATA 361
consensus_8505#1 TAGTGCTGCGCAGTTGCGTGGCCCGGCTGACAGAAAAGTAAAGTGGAGTACTGATGAATA 448
consensus_8505#4 CAGGCGACGGAGGCAGAGCTCCCTGGGCGGCTGAGGCG-GAGCCGGAG--CGGGCGGGCA 197
consensus_8505#3 TGGATGCTAACATCAGTGAACTC---ACGGTAGTGGCATGAGAGGGTGTGCAAATTTG-A 314
* * * * * * *
consensus_8505#0 TGTTGTGGATGTATTGTGAACT-TAGCCATAGATATAAGTATCCCTAGTGGCACATACAC 513
consensus_8505#2 TGTCGCGGATGCGTTGTGAATTGTAGCCATGGATATAAGTATCCCCAGCGGCGCATGCAG 421
consensus_8505#1 TGTC--------------------AGCCATGGATATAAGTATCCCCAGCGGCGCATGCAC 488
consensus_8505#4 GCCGGCAG---------------CGGAGGAGCTCGCTCGGGCAGCCGGTGGCGGAGGCGG 242
consensus_8505#3 TTCAATGG---CATATAAGGAAAGAGCCAATTTTGTGTGGCATATCAGGGATCGGACCAA 371
* * * * *
consensus_8505#0 ACGCACACGTCA-TCTTTGTCAA----GCGATTAATATGGGCTGCAAACAAATATGAGGT 568
consensus_8505#2 ACGCACACGTCA-TCTTTGTCAA----GCGATTAATATGGGCCGCAAATAAATACAAGGC 476
consensus_8505#1 A--CACACGTCA-TCTTTGTCAA----GCGATTAATATGAGCTACAAATAAATACAAGGC 541
consensus_8505#4 AGGTAGAAGGCGCTCTTCGACGACGCCGCGGGTAGCGGCGACGCCTCCTTCGTCTCCTCC 302
consensus_8505#3 ATTTCAATGGCA-TATAAGGGATTCTCTCTTCCATCAATGATGAC-CTTTTATCTTTGAA 429
* * * * * * * * * * *
consensus_8505#0 GAACCTAATCCTTCTGGGGGTTGGGCCGTCTAAATTATCAAAATATCAAATATTGGATGT 628
consensus_8505#2 GAGCCTGACCCTCGTGAGGGTTGAACCGTCTAAATTATCA--ATATCAAATATTGGATGT 534
consensus_8505#1 GAGCCTGACCTTCGTGAGGGTTGGACCGTCTAAATTATCA--ATATCAAATATTGGATGT 599
consensus_8505#4 CACTACAACCGCCGCGCGGACCACACCTACTCG-TCGTCGTCAT-CCATGCGCGCGATGG 360
consensus_8505#3 GGTTCTAATCGTGACACGT-CATCACCAATGAGGATTGTTTGATGAAACATTTTGTTTGA 488
* * * ** ** * **
consensus_8505#0 AGATATTTATTTGTATATA--CTTGGGATGAGTTTGAGTCTTATTGGCATCGGACCAACC 686
consensus_8505#2 AGATATTTATTTGTATAAA--CTTAGGATGAGTTTGAGTCTTATTGGCATCAGACCAACC 592
consensus_8505#1 GGATATTTATTTATATATAAACTTGGGATGAGTTTGAGTCTTATTGGCATCAGACCAACC 659
consensus_8505#4 CCGCCGGTATCGGGGAGGA----TGGGGGAAAGCGGCGGAAGTTGGGGACGAGACGCGCG 416
consensus_8505#3 TGAAAACAACACATAGAAAA---TAGGGAAACCCTGTATTTTATTAAT-CACGATTCATT 544
* * * ** * * * **
consensus_8505#0 ATGATTTATACATATCTAAAGTCTTCAAACCTGCCCGAGAATGTAGCGCCCACGGTGTTT 746
consensus_8505#2 ATGATCTATACATATTTATATTCATGC--------------------------------- 619
consensus_8505#1 ATGATTTATACATATTTATATTCATGCCGGATGAGTCACA-TATTGCCTCGTGCATGTCA 718
consensus_8505#4 ATGG---GTGCCGGT--------------------------------------------- 428
consensus_8505#3 ATCATGAATGTTTACAAATACATCAGGGCTCCCACAGGAGTTCGC--------------- 589
** *
consensus_8505#0 TGCCCTGGTGTGGCCCTTGCCGGGTCGCGACACGTCAGCGTGCGCTGGAGGGCGGGTGGA 806
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 TGTACGGGAGCAATTCCTTCCCTCTCCAAATTCTACCGGATGGACGGGGGATATTCGCTA 778
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 TTTCGCGGCTTCTCGTGTGTCTGCGTTGGCCCTCGTATTTTTGCACAAAAGCCCTTCTTT 866
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 AATAAAATAACGCTAGCCATGAGGGCGAGGCGTGCAGATTTAAAACACACGTCGACATCT 838
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 TTATTGATAATTTGTTTTAGGTACATGCTCTTTAGTTTGTACGGTGTTCTGTGTTCTTAT 926
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 TGGCCGAGTGTTGACGAGATGAAATGGCTG---GATTATCATTATTTATGCTATGTGTAA 895
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 GTACAGGGCCTCTACAAACTGTAATATTGTATGAAAAGAAGAGAAAATTTGGAAAAGAGG 986
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 GACCGACGAGGCCGAACGACGTATTGGCTAAAGCTAGCAAGGCTACAGCTATTCATTCAT 955
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 AGCGCGCTCTGAATAACATAAAGTGAGTTCATATTCATTCTGGAAGAGTTACATATTTGC 1046
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 TTCATTTGTCTATGACCGACGAGGCTAGACGAAACCATGGCCGAGTGCCGACAAGGCCAG 1015
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 CTCGTGCATGCCTCGTGCATGTCATGTACGGGAGTAATTCCTTCTCTCTCCAAATTCTAC 1106
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 GTCAC-TATACTATTAACACGTCTAAAACGGACGGGAACCGGATGCACC----GTTGCTG 1070
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 CAGATGGATGGTCTTAATCTATCTCAATGATTAAAGTCAGATTGATGAGAGCCGAAACAC 1166
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 GGCACCGACAAGGCAAAAGCAACAATAAAATCCATGTTTGATGAAGGCCGG--GGTACAT 1128
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 GGCTATGATCAAACTGCATTTATATAATCAATGGTATTAGGCTGGTCCGGCCCTCAT--- 1223
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 GACTGGGCACCGACGAGGCAAAGGTCACCCGCTTCACCAAATTCTCTCCGCACTCCGACG 1188
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 TGGCGATTGGATCATCTGAGTGCCATTTGATATTTTCTA-TGATTAAAACTAGACGCCTG 1282
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 TGGTGGTAGTGTACTGTGACCGGGTTTTGGTGAAACAAAGCCATCCGTTCCACATTCACT 1248
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 GTCTTCATTGG-AGATCGGATCGTCTATCGGTTACTATGATACCAATAACAATGGT-ACT 1340
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 GTATTCAACATTAAATCTGCACCAACCTCAACCTTCGGCGAGCAAACAACTTTGAAGACG 1308
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 AGATATGTCCAGCCCCCATTGGTGATCGGACTGTCTAGGCGTTGTTTTCATAATTAAAAT 1400
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ACGATCATAAAGCGCAGCTTAATCGGAGGTATTACATAGGCTCGTCCTGTGGATGTAATT 1368
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 ATATTTTGCCCCCATGCATATGCACAGGAGCTGTTCTTGACTCATGCATACGCCAACTAC 1460
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 AACCGGTAGCCTCATTGTTAGGCGTCGGGAATCAACGGACTGCACGCAATCTCCAGTCAG 1428
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 GGAGGCGTTGCGTCCGAGA---CCGACGAGGTTGGGCGACGTATTGGCTTAAGCTAACAA 1517
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 CATACCTTTTCATTAAGCATTCCTCACGAAGGCAAAAGGCGAACTCCTGCGGGAGCTCTC 1488
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 GGCTACAGCCATTCATTTGTTTCATTGTGT-ATGACCGACGAGGCTTGACGAAACCATGG 1576
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ATGTATTTGTAAACATTCATGTTAATGAATCATGATTAATAAAATAC------------- 1535
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 CCGAGTGCTGACAAGGCCAGGTCATTATTATATTAACACGTCTAAAATGGATGGAAACCG 1636
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ------------------------------------------------------------
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 GATACGCCGTTGCTGGACACTAACGAGGCAAAAGCAACCATAAAATCCATGTTTGATGAA 1696
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ------------------------------------------------------------
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 AGCCAAGATACATGAGTGGGCGCTGACGAGGCAAAGGTCACCCGCTCCACCAGATTCCCT 1756
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ------------------------------------------------------------
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 CCACACACCGACGTGACAGTAGTGTACTGTGACTGGGTTTTGGCGAAACAAAGCCATCCA 1816
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ------------------------------------------------------------
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 TTCTACATTCACTATATTCACCGTTAAATCTGCACCAACCTCAATCTTCGGCGAGCAAAT 1876
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ------------------------------------------------------------
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 AAATTTGAAGACGACGATCACAAAGCGCAGCTTAATCGGAGGTGTTCCATAGGCTCATCC 1936
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ------------------------------------------------------------
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 TTTGGATGTAATTAATCGGTAGTTTTCTATTAAGCATTCCTCGCGAAGGCAAAAGGCTAA 1996
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ------------------------------------------------------------
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 CTCCTGCGGGAGCCCTCATGTTTTTGTAAACATTCATGTTAATGAATCATGATTAATAAA 2056
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ------------------------------------------------------------
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 ATACAAGGTTTCCCTATTTTCTGTGTGTTCATTGTTTTGTTTTCGTCAAACACAGAATAC 2116
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ------------------------------------------------------------
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 CAAATTAACTTAAATTGATTTGCATGGGTTGATTTGATTTGTGAATCAGCTTGGTTCTTG 2176
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ------------------------------------------------------------
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 CCGATGGGGGTGCACAGGTTGGAGAGGCAAGTGGTGCCACATTTCTTCTCCAGAGGAAGT 2236
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ------------------------------------------------------------
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 TTAATAATATAGCCAACTATTGCTTCAAAAATTAAAACACATCTCTATCTCTACTACTAC 2296
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ------------------------------------------------------------
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 TTAAAAAGTTAGAGGTGCTTTCGTCGTCCGTAAAAATAAAATAAAGGGCGAAAAAATTGA 2356
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ------------------------------------------------------------
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 ATCTTTATATACGATGCGGTAAAAAAAACAGTCATCAGTGTCCATGAAAAAAAAGATCCG 2416
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ------------------------------------------------------------
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 ATTAGTCCGTCCGTTAAAATAAAAAGATGAGATGCGTCCGTGAAAAGAAAAGATCCGATT 2476
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ------------------------------------------------------------
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 AGTCAGTCCGTTAAAATAAAAGGAAAGGGCGACAAAAAGATCCGATTCTATGCGTGCGGG 2536
consensus_8505#2 ------------------------------------------------------------
consensus_8505#1 ------------------------------------------------------------
consensus_8505#4 ------------------------------------------------------------
consensus_8505#3 ------------------------------------------------------------
consensus_8505#0 AAAAAAAAACGGTCCGT 2553
consensus_8505#2 -----------------
consensus_8505#1 -----------------
consensus_8505#4 -----------------
consensus_8505#3 -----------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||