cluster # 8508

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Oryza sativa
cluster # 8508 cluster # 8508 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8508#0 length = 2446 sequences # 5
consensusID : consensus_8508#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2446
fasta sequence
                              [AGACCGCCGCCGCCGCCGCCAAAAAAACCCGTAAACCCTAGCTCACGACGGCCGGCGTCGCGCCGCCGCCCCATGCCTAGCTGCTGCTGCCTCCTCGGCCTCGGCTTCCCCTCGCCGCCCTCCGCCCTCCGCATCCTGCGCCGCCGCATGGCCTCTCGCGCCTTCCAGCTCCGCCTCAACCCGCTCACCGGCGACTCCGAATGGCTCGTCGTTGAGGAGGAGGAGGAGGAGGACCACCACCCGACACCGCCACCCAAGCAGCTTCTCGCCACCACCTCCTACCTCGACATGCTCAACGACTCCGCCCGGAACCGCGCATACCGCCGCGCCATCGAAGCCGCCGTCACCGACCCTTCCTCGCGCGTCCTCGACATTGGAGCTGGGACTGGGTTGCTATCCATGATGGCCGCCCGAGCTTTGGCAGCTGTTGGGGGTGAAACTAGAGGAGGAAGTGTTTCAGCATGTGAATCTTACCTCCCAATGGGAAAATTGATGCGAAGGGTACTGAGAGCCAATGGGATGGAAAACAGGGTCAAAGTCTTTCACAAGCGTTCGGATGAGCTCAAAGTCAGAGATGACCTGGATTCACCAGCTGATATATTGGTAAGTGAAATTCTTGATTCTGAGCTGTTGGGCGAGGGTCTGATACCTACTTTACAGCAAGCATATGACATGTTATTGGCAAAAAATCCAAAGATAGTTCCTTATCGAGCCACTACATATGGGC----AGTTGAAAGTACATTCTTGTGGAAGCTACATGATTTGCACAACAATGAAGCAAATGCTGCAGACGGTGTATGGCTTACTCCTGGTGAGATGGAGAGGATTGTGTCTGTGAAGCCACAACAACATGCAATGCAATGTGATGCACTAGAAGATGAGATACGATTGCTGTCAGAACCCTTCAAAGTTTTTGAATTTGACTTTTGGAAACGGCCAGATAGTCATCGTGAGGCCAATATCAAGATACGAACAACACGAGATGGATATGTTCATGCTATTATTTCATGGTGGGTACTTCAATTGGATTCTGCTGGGTCAATCTTCTACTCAACTGCTCCTAGATGGGCGAGACAATCAAGTAGTGAGGGGCCGCAACGCGACATGAAGGATTGGTGTGATCACTGGAAGCAGTGTGTATGGTTCATGCAAGGCAAGGGGATCCCTGCTACGGAAGACCAAGTTCTTTCGTTACGAGCTAGACATAACCAAACCAGCATCTCCTATCAGCTGAACATCAATGATGAAGCATGTGATAGAAGTTCCAAAGGTGACCATCTAACGTTGTTGCCAGAACGGATTGCACTTTATGGTGATAAAGATTGGAGATCAGCTCTGATAAATACCATTAAAAATGCTTTAACTGTGAAATCTTCCCCAACTTGTGTTGTGGCTGACGACAGCATGTTCTTGGCTCTCTTAATTTCCTCCATGTCACCCACTTCAAAAGTCATCGCGATGTACCCTGGTCTACGGGACAAGGGTGCAGCCTATCTTCGATCTGTTGCAGATGCAAATAATTTTTCCATAGACCAGATTCAAGTGATTGGTAAAAGAGCCTCATCTATTACAGCTGATGACCTGAAACATAAAAAGGTTAATTTATTAGTGGGGGAGCCATTTTATCTTGGAAGTG--TGAATGCTTCCGTGGCAAAATCTACGTTTCTGGAGTGTGAGGACCCTACTTG--ACTCGATGTTATCTGAGGATGCATTCATCATGCCTTGTAAAGGAATACTAAAGCTATGTGCAATGTCACTTCCGGACTTATGGAGGAGCCGTAGCAGCCTTAAAGATGTAGAGGGTTTTGATCACTCAGTTGTCAATGAGACTTTAGGAGCCTGTGGTTGCCTGCCTGGAGACCAGCAAGGTCCTTGTCTGCCGTATTACGTATGGCAATGTGGTTATACCAAGAAATTAAGTAAAGTGTACTCTCTGATGGATTTCAACTTTTCTGAGCCAATCCACTCCTGTTTTGGGAAAACAAAGATCGAGTTTTCTCATGATGGAACATGCCATGGTTTTGCGGTTTGGATTGATTGGGTTCTTGATGAGAGAAAATCCGTTGTGTTAACAACCGGACCAGATAACCGATACTGGAAACAAGGAGTACAGCTCTTTAGCAAGCCTGTAGAAGTAAATCCAGGCAAGTCGGTGATGCATGTAGAGGCGTCCTTCGATCCTTCCACGGGTGAGATAACGTTCAGCAGTTCATCAACAACCTGCTCCTGAGGCGATGCTGTATTGCTATGCCATCTGTGTGTGCGCCTATGCAACATGGGAAGCATATTGCTTGCGTAATTCGGCCCAGCGATTACGGCGCACCGTAGGACATTAGTGTTTTCATCCCGCAGATATTTGGCAGTGGTTATTTGTGCGTAGGCCACAAACCGTTCAGTCCAAAACGTCTTAACTTTTGTTCTAAAATTGAGATGCAAAAAAGGGGAAA]

[+] EMBL AK099594             [AGACCGCCGCCGCCGCCGCCAAAAAAACCCGTAAACCCTAGCTCACGACGGCCGGCGTCGCGCCGCCGCCCCATGCCTAGCTGCTGCTGCCTCCTCGGCCTCGGCTTCCCCTCGCCGCCCTCCGCCCTCCGCATCCTGCGCCGCCGCATGGCCTCTCGCGCCTTCCAGCTCCGCCTCAACCCGCTCACCGGCGACTCCGAATGGCTCGTCGTTGAGGAGGAGGAGGAGGAGGACCACCACCCGACACCGCCACCCAAGCAGCTTCTCGCCACCACCTCCTACCTCGACATGCTCAACGACTCCGCCCGGAACCGCGCATACCGCCGCGCCATCGAAGCCGCCGTCACCGACCCTTCCTCGCGCGTCCTCGACATTGGAGCTGGGACTGGGTTGCTATCCATGATGGCCGCCCGAGCTTTGGCAGCTGTTGGGGGTGAAACTAGAGGAGGAAGTGTTTCAGCATGTGAATCTTACCTCCCAATGGGAAAATTGATGCGAAGGGTACTGAGAGCCAATGGGATGGAAAACAGGGTCAAAGTCTTTCACAAGCGTTCGGATGAGCTCAAAGTCAGAGATGACCTGGATTCACCAGCTGATATATTGGTAAGTGAAATTCTTGATTCTGAGCTGTTGGGCGAGGGTCTGATACCTACTTTACAGCAAGCATATGACATGTTATTGGCAAAAAATCCAAAGATAGTTCCTTATCGAGCCACTACATATGGGCAGCTAGTTGAAAGTACATTCTTGTGGAAGCTACATGATTTGCACAACAATGAAGCAAATGCTGCAGACGGTGTATGGCTTACTCCTGGTGAGATGGAGAGGATTGTGTCTGTGAAGCCACAACAACATGCAATGCAATGTGATGCACTAGAAGATGAGATACGATTGCTGTCAGAACCCTTCAAAGTTTTTGAATTTGACTTTTGGAAACGGCCAGATAGTCATCGTGAGGCCAATATCAAGATACGAACAACACGAGATGGATATGTTCATGCTATTATTTCATGGTGGGTACTTCAATTGGATTCTGCTGGGTCAATCTTCTACTCAACTGCTCCTAGATGGGCGAGACAATCAAGTAGTGAGGGGCCGCAACGCGACATGAAGGATTGGTGTGATCACTGGAAGCAGTGTGTATGGTTCATGCAAGGCAAGGGGATCCCTGCTACGGAAGACCAAGTTCTTTCGTTACGAGCTAGACATAACCAAACCAGCATCTCCTATCAGCTGAACATCAATGATGAAGCATGTGATAGAAGTTCCAAAGGTGACCATCTAACGTTGTTGCCAGAACGGATTGCACTTTATGGTGATAAAGATTGGAGATCAGCTCTGATAAATACCATTAAAAATGCTTTAACTGTGAAATCTTCCCCAACTTGTGTTGTGGCTGACGACAGCATGTTCTTGGCTCTCTTAATTTCCTCCATGTCACCCACTTCAAAAGTCATCGCGATGTACCCTGGTCTACGGGACAAGGGTGCAGCCTATCTTCGATCTGTTGCAGATGCAAATAATTTTTCCATAGACCAGATTCAAGTGATTGGTAAAAGAGCCTCATCTATTACAGCTGATGACCTGAAACATAAAAAGGTTAATTTATTAGTGGGGGAGCCATTTTATCTTGGAAGTG  TGAATGCTTCCGTGGCAAAATCTACGTTTCTGGAGTGTGAGGACCCTACTTG  ACTCGATGTTATCTGAGGATGCATTCATCATGCCTTGTAAAGGAATACTAAAGCTATGTGCAATGTCACTTCCGGACTTATGGAGGAGCCGTAGCAGCCTTAAAGATGTAGAGGGTTTTGATCACTCAGTTGTCAATGAGACTTTAGGAGCCTGTGGTTGCCTGCCTGGAGACCAGCAAGGTCCTTGTCTGCCGTATTACGTATGGCAATGTGGTTATACCAAGAAATTAAGTAAAGTGTACTCTCTGATGGATTTCAACTTTTCTGAGCCAATCCACTCCTGTTTTGGGAAAACAAAGATCGAGTTTTCTCATGATGGAACATGCCATGGTTTTGCGGTTTGGATTGATTGGGTTCTTGATGAGAGAAAATCCGTTGTGTTAACAACCGGACCAGATAACCGATACTGGAAACAAGGAGTACAGCTCTTTAGCAAGCCTGTAGAAGTAAATCCAGGCAAGTCGGTGATGCATGTAGAGGCGTCCTTCGATCCTTCCACGGGTGAGATAACGTTCAGCAGTTCATCAACAACCTGCTCCTGAGGCGATGCTGTATTGCTATGCCATCTGTGTGTGCGCCTATGCAACATGGGAAGCATATTGCTTGCGTAATTCGGCCCAGCGATTACGGCGCACCGTAGGACATTAGTGTTTTCATCCCGCAGATATTTGGCAGTGGTTATTTGTGCGTAGGCCACAAACCGTTCAGTCCAAAACGTCTTAACTTTTGTTCTAAAATTGAGATGCAAAAAAGGGGAAA]
[+] EMBL CB631646             [                                                                   GCCCCATGCCTAGCTGCTGCTGCCTCCTCGGCCTCGGCTTCCCCTCGCCGCCCTCCGCCCTCCGCATCCTGCGCCGCCGCATGGCCTCTCGCGCCTTCCAGCTCCGCCTCAACCCGCTCACCGGCGACTCCGAATGGCTCGTCGTTGAGGAGGAGGAGGAGGAGGACCACCACCCGACACCGCCACCCAAGCAGCTTCTCGCCACCACCTCCTACCTCGACATGCTCAACGACTCCGCCCGGAACCGCGCATACCGCCGCGCCATCGAAGCCGCCGTCACCGACCCTTCCTCGCGCGTCCTCGACATTGGAGCTGGGACTGGGTTGCTATCCATGATGGCCGCCCGAGCTTTGGCAGCTGTTGGGGGTGAAACTAGAGGAGGAAGTGTTTCAGCATGTGAATCTTACCTCCCAATGGGAAAATTGATGCGAAGGGTACTGAGAGCCAATGGGATGGAAAACAGGGTCAAAGTCTTTCACAAGCGTTCGGATGAGCTCAAAGTCGGAGATGACCTGGATTCACCAGCTGATATATTGGTAAGTGAAATTCTTGATTCTGAGCTGTTGGGCGAGGGTCTGATACCTACTTTACAGCAAGCATATGACATGTTATTGGCAAAAAATCCAAAGATAGTTCCTTATCGAGCCACTACATATGGGC    AGTTGAAAGTACATTCTTGTGGAAGCTACATGATTTGCACAACAATGAAGCAAATGCTGCAAACGGTGTATGGCTGACTCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF305946             [                                                                                                                                                                                                                                                                   AGCTTCTCGCCACCACCTCCTACCTCGACATGCTCAACGACTCCGCCCGGAACCGCGCATACCGCCGCGCCATCGAAGCCGCCGTCACCGACCCTTCCTCGCGCGTCCTCGACATTGGAGCTGGGACTGGGTTGTTATCCATGATGGCCGCCCGAGCTTTGGCAGCTGTTGGGGGTGAAACTAGAGGAGGAAGTGTTTCAGCATGTGAATCTTACCTCCCAATGGGAAAATTGATGCGAAGGGTACTGAGAGCCAATGGGATGGAAAACAGGGTCAAAGTCTTTCACAAGCGTTCGGATGAGCTCAAAGTCAGAGATGACCTGGATTCACCAGCTGATATATTGGTAAGTGAAATTCTTGATTCTGAGCTGTTGGGCGAGGGTCTGATACCTACTTTACAGCAAGCATATGACATGTTATTGGCAAAAAATCCAAAGATAGTTCCTTATCGAGCCACTACATATGGGC    AGTTGAAAGTACATTCTTGTGGAAGCTACATGATTTGCACAACAATGAAGCAAATGCTGCAGACGGTGTATGGCTTACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL D42297               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCTCATCTATTACAGCTGATGACCTGAAACATAAAAAGGTTAATTTATTAGTGGGGGAGCCATTTTATCTTGGAAGTGAAGGAATGCT  CGTGGCAAAATCTACG TTCTGGAGTGTGAGGACCCTACTTGCAACTCGATGTTATCTGAGGAAGCATTCATCATGCCTTGTAAAGGAATACTAAAGCTATGTGCAATGTCACTACCGa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB631647             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGTTATCTGAGGATGCATTCATCATGCCTTGTAAAGGAATACTAAAGCTATGTGCAATGTCACTTCCGGACTTATGGAGGAGCCGTAGCAGCCTTAAAGATGTAGAGGGTTTTGATCACTCAGTTGTCAATGAGACTTTAGGAGCCTGTGGTTACCTGCCTGGAGACCAGCAAGGTCCTTGTCTGCCGTATTATGTATGGCAATGTGGTTATACCAAGAAATTAAGTAAAGTGTACTCTCTGATGGATTTCAACTTTTCTGAGCCAATCCACTCCTGTTTTGGGAAAACAAAGATCGAGTTTTCTCATGATGGAACATGCCATGGTTTTGCGGTTTGGATTGATTGGGTTCTTGATGAGAGAAAATCCGTTGTGTTAACAACCGGACCAGATAACCGATACTGGAAACAAGGAGTACAGCTCTTTGGCAAGCCTGTAGAAGTAAATCCAGGCAAGTCGGTGATGCATGTAGAGGCGTCCTTCGATCCTTCCACGGGTGAGATAACGTTCAGCAGTTCATCAACAACCTGCTCCTGAGGCGATGCTGTATTGCTATGCCATCTGTGTGTGCGCCTATGCAACATGGGAAGCATATTGCTTGCGTAATTCGGCCCAGCGATTACGGCGCACCGTAGGACATTAGTGTTTTCATCCCGCAGATATTTGGCAGTGGTTATTTGTGCGTAGGCCACAAACCGTTCAGTCCAAAACGTCTTAAC                                   ]




>consensus_8508#0
AGACCGCCGCCGCCGCCGCCAAAAAAACCCGTAAACCCTAGCTCACGACGGCCGGCGTCG
CGCCGCCGCCCCATGCCTAGCTGCTGCTGCCTCCTCGGCCTCGGCTTCCCCTCGCCGCCC
TCCGCCCTCCGCATCCTGCGCCGCCGCATGGCCTCTCGCGCCTTCCAGCTCCGCCTCAAC
CCGCTCACCGGCGACTCCGAATGGCTCGTCGTTGAGGAGGAGGAGGAGGAGGACCACCAC
CCGACACCGCCACCCAAGCAGCTTCTCGCCACCACCTCCTACCTCGACATGCTCAACGAC
TCCGCCCGGAACCGCGCATACCGCCGCGCCATCGAAGCCGCCGTCACCGACCCTTCCTCG
CGCGTCCTCGACATTGGAGCTGGGACTGGGTTGCTATCCATGATGGCCGCCCGAGCTTTG
GCAGCTGTTGGGGGTGAAACTAGAGGAGGAAGTGTTTCAGCATGTGAATCTTACCTCCCA
ATGGGAAAATTGATGCGAAGGGTACTGAGAGCCAATGGGATGGAAAACAGGGTCAAAGTC
TTTCACAAGCGTTCGGATGAGCTCAAAGTCAGAGATGACCTGGATTCACCAGCTGATATA
TTGGTAAGTGAAATTCTTGATTCTGAGCTGTTGGGCGAGGGTCTGATACCTACTTTACAG
CAAGCATATGACATGTTATTGGCAAAAAATCCAAAGATAGTTCCTTATCGAGCCACTACA
TATGGGCAGTTGAAAGTACATTCTTGTGGAAGCTACATGATTTGCACAACAATGAAGCAA
ATGCTGCAGACGGTGTATGGCTTACTCCTGGTGAGATGGAGAGGATTGTGTCTGTGAAGC
CACAACAACATGCAATGCAATGTGATGCACTAGAAGATGAGATACGATTGCTGTCAGAAC
CCTTCAAAGTTTTTGAATTTGACTTTTGGAAACGGCCAGATAGTCATCGTGAGGCCAATA
TCAAGATACGAACAACACGAGATGGATATGTTCATGCTATTATTTCATGGTGGGTACTTC
AATTGGATTCTGCTGGGTCAATCTTCTACTCAACTGCTCCTAGATGGGCGAGACAATCAA
GTAGTGAGGGGCCGCAACGCGACATGAAGGATTGGTGTGATCACTGGAAGCAGTGTGTAT
GGTTCATGCAAGGCAAGGGGATCCCTGCTACGGAAGACCAAGTTCTTTCGTTACGAGCTA
GACATAACCAAACCAGCATCTCCTATCAGCTGAACATCAATGATGAAGCATGTGATAGAA
GTTCCAAAGGTGACCATCTAACGTTGTTGCCAGAACGGATTGCACTTTATGGTGATAAAG
ATTGGAGATCAGCTCTGATAAATACCATTAAAAATGCTTTAACTGTGAAATCTTCCCCAA
CTTGTGTTGTGGCTGACGACAGCATGTTCTTGGCTCTCTTAATTTCCTCCATGTCACCCA
CTTCAAAAGTCATCGCGATGTACCCTGGTCTACGGGACAAGGGTGCAGCCTATCTTCGAT
CTGTTGCAGATGCAAATAATTTTTCCATAGACCAGATTCAAGTGATTGGTAAAAGAGCCT
CATCTATTACAGCTGATGACCTGAAACATAAAAAGGTTAATTTATTAGTGGGGGAGCCAT
TTTATCTTGGAAGTGTGAATGCTTCCGTGGCAAAATCTACGTTTCTGGAGTGTGAGGACC
CTACTTGACTCGATGTTATCTGAGGATGCATTCATCATGCCTTGTAAAGGAATACTAAAG
CTATGTGCAATGTCACTTCCGGACTTATGGAGGAGCCGTAGCAGCCTTAAAGATGTAGAG
GGTTTTGATCACTCAGTTGTCAATGAGACTTTAGGAGCCTGTGGTTGCCTGCCTGGAGAC
CAGCAAGGTCCTTGTCTGCCGTATTACGTATGGCAATGTGGTTATACCAAGAAATTAAGT
AAAGTGTACTCTCTGATGGATTTCAACTTTTCTGAGCCAATCCACTCCTGTTTTGGGAAA
ACAAAGATCGAGTTTTCTCATGATGGAACATGCCATGGTTTTGCGGTTTGGATTGATTGG
GTTCTTGATGAGAGAAAATCCGTTGTGTTAACAACCGGACCAGATAACCGATACTGGAAA
CAAGGAGTACAGCTCTTTAGCAAGCCTGTAGAAGTAAATCCAGGCAAGTCGGTGATGCAT
GTAGAGGCGTCCTTCGATCCTTCCACGGGTGAGATAACGTTCAGCAGTTCATCAACAACC
TGCTCCTGAGGCGATGCTGTATTGCTATGCCATCTGTGTGTGCGCCTATGCAACATGGGA
AGCATATTGCTTGCGTAATTCGGCCCAGCGATTACGGCGCACCGTAGGACATTAGTGTTT
TCATCCCGCAGATATTTGGCAGTGGTTATTTGTGCGTAGGCCACAAACCGTTCAGTCCAA
AACGTCTTAACTTTTGTTCTAAAATTGAGATGCAAAAAAGGGGAAA
clustalw multiple alignements is not computed in this case