cluster # 8509

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Oryza sativa
cluster # 8509 cluster # 8509 Sequences # 5 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8509#0 length = 2074 sequences # 2
consensus_8509#1 length = 1876 sequences # 1

consensus_8509#2 length = 1618 sequences # 1
consensus_8509#3 length = 641 sequences # 1

consensusID : consensus_8509#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2074
fasta sequence

                              [CACTGTCCCCCGTGCCCGATGGCCGCGCCCGCGCCCACAGCTTCGCCGCCGCCGCCGCCCGCCATGTCCGGCCTCCTCTCCTTCGCCTCGTCCCGCCCCTACCCTCCCCTCCCCGCGCCCAGACCCGCCGCCGCCGCCCCCAGGCCGCGCCTCCGCATAGCGGGTTCCGCCGCCGCGGCCCCCAACGCCGTGTCCCACCGGGCATCCTCCTCCTTCTCCTCCGGAGACCGCCTCCGCTCGCTCGTCCGCCGCGGGGAGCTCGACGAGGCGCTCCGCCTCGTCGGGTCCGCGCGGAGGCCCGACGCGGGCACCTGCGCCGCGCTCATCAAGAAGCTCAGCGCGTCGGGGCGCACCGCGGAGGCCCGCCGCGTGCTGGCCGCGTGCGGCCCCGACGTCATGGCGTACAACGCCATGGTGGCCGGGTACTGCGGCGCGGGGCAGCTCGACGCCGCGCGGCGGCTCGTCGCGGAGATGCCCGTGGAGCCCGACGCCTACACCTACAACACGCTCATCCGAGGCCTCTGCGGACGCGGCCGGACCGCGAACGCGCTGGCGGTGCTCGACGAAATGCTCCGCCGGCGATGTGTGCCGGACGTGGTCACCTACACCATCCTCCTCGAGGCCACGTGCAAGAGGAGCGGGTACAAGCAGGCCATGAAGCTTCTCGACGAGATGCGAGATAAGGGGTGCACCCCGGACATTGTCACCTACAACGTCGTTGTCAATGGAATCTGCCAAGAAGGACGGGTTGACGATGCCATTGAGTTCTTGAAGAACCTCCCGTCATATGGCTGTGAACCAAACACAGTTAGCTATAACATTGTGTTGAAGGGCCTGTGTACCGCGGAGCGATGGGAGGATGCCGAGGAGCTCATGGGCGAGATGGGCCAGAAGGGTTGCCCTCCAAATGTGGTAACTTTTAACATGCTCATCAGTTTCTTATGCCGGAAAGGATTGGTTGAGCCAGCACTGGAAGTCCTTGAGCAGATCCCCAAGTACGGTTGCACACCTAATTCGTTGAGTTACAACCCGCTTCTCCACGCATTCTGCAAGCAAAAAAAGATGGATAAAGCGATGGCGTTTTTGGATTTGATGGTGTCCAGAGGCTGTTATCCAGACATCGTTTCATACAACACTCTACTTACTGCACTCTGCCGCAGTGGTGAGGTTGACGTCGCTGTTGAATTGCTTCATCAACTCAAGGACAAGGGCTGCGCTCCTGTCTTGATAAGTTATAACACGGTCATTGATGGGCTTACGAAGGCTGGGAAGACAAAGGAAGCACTAGAGCTGCTCAATGAGATGGTCAGCAAAGGGCTCCAACCAGATATTATCACATACTCGACAATAGCTGCTGGTCTTTGTAGAGAAGATAGAATTGAAGATGCAATTAGGGCATTTGGTAAAGTGCAAGATATGGGCATAAGGCCCAACACTGTGTTGTACAATGCGATAATTCTTGGGCTTTGCAAAAGGCGTGAAACACACAGTGCCATTGATCTTTTCGCTTACATGATAGGGAATGGCTGCATGCCGAATGAATCAACTTACACCATATTGATTGAAGGCTTGGCTTATGAGGGATTGATCAAGGAGGCACGGGATTTGCTGGATGAATTATGTTCGAGAGGTGTTGTAAGGAAGAGCTTGATAAATAAGGGAGCCATTAGACTGCTTGATTGAACTATGAATACATATAAGAGGATCAACTGAGTATCGAGGGTCTGAGAATGAGATTTTGTGCATCTTCGCTCTTCAGCAGGAGAGGAGATTTTACTGGATGTTCACCTAATTGATGTTGCTTTCTTGACAACATGTGAGTCCTTTCATCCACTTCCCACCTTACAGGCTTACAGCCCACTTCAGTCTTCGAGTTGCTTGGAATTTCTGCATAACTCTTGTCTTATTTAACATACTTTACCTTATTGTTGAACATGGTCTCATGTTTCACATTCTTGTCCTTACATGATATATCATACTAGTGTGAGATACATATTAGACCTGTTTTGATTGGGCATTTCTTGCTTCAATATGCTTTAGCACTTCATATGAACTAGCGGAATGAAGGGATATG]

[+] EMBL AK068847             [CACTGTCCCCCGTGCCCGATGGCCGCGCCCGCGCCCACAGCTTCGCCGCCGCCGCCGCCCGCCATGTCCGGCCTCCTCTCCTTCGCCTCGTCCCGCCCCTACCCTCCCCTCCCCGCGCCCAGACCCGCCGCCGCCGCCCCCAGGCCGCGCCTCCGCATAGCGGGTTCCGCCGCCGCGGCCCCCAACGCCGTGTCCCACCGGGCATCCTCCTCCTTCTCCTCCGGAGACCGCCTCCGCTCGCTCGTCCGCCGCGGGGAGCTCGACGAGGCGCTCCGCCTCGTCGGGTCCGCGCGGAGGCCCGACGCGGGCACCTGCGCCGCGCTCATCAAGAAGCTCAGCGCGTCGGGGCGCACCGCGGAGGCCCGCCGCGTGCTGGCCGCGTGCGGCCCCGACGTCATGGCGTACAACGCCATGGTGGCCGGGTACTGCGGCGCGGGGCAGCTCGACGCCGCGCGGCGGCTCGTCGCGGAGATGCCCGTGGAGCCCGACGCCTACACCTACAACACGCTCATCCGAGGCCTCTGCGGACGCGGCCGGACCGCGAACGCGCTGGCGGTGCTCGACGAAATGCTCCGCCGGCGATGTGTGCCGGACGTGGTCACCTACACCATCCTCCTCGAGGCCACGTGCAAGAGGAGCGGGTACAAGCAGGCCATGAAGCTTCTCGACGAGATGCGAGATAAGGGGTGCACCCCGGACATTGTCACCTACAACGTCGTTGTCAATGGAATCTGCCAAGAAGGACGGGTTGACGATGCCATTGAGTTCTTGAAGAACCTCCCGTCATATGGCTGTGAACCAAACACAGTTAGCTATAACATTGTGTTGAAGGGCCTGTGTACCGCGGAGCGATGGGAGGATGCCGAGGAGCTCATGGGCGAGATGGGCCAGAAGGGTTGCCCTCCAAATGTGGTAACTTTTAACATGCTCATCAGTTTCTTATGCCGGAAAGGATTGGTTGAGCCAGCACTGGAAGTCCTTGAGCAGATCCCCAAGTACGGTTGCACACCTAATTCGTTGAGTTACAACCCGCTTCTCCACGCATTCTGCAAGCAAAAAAAGATGGATAAAGCGATGGCGTTTTTGGATTTGATGGTGTCCAGAGGCTGTTATCCAGACATCGTTTCATACAACACTCTACTTACTGCACTCTGCCGCAGTGGTGAGGTTGACGTCGCTGTTGAATTGCTTCATCAACTCAAGGACAAGGGCTGCGCTCCTGTCTTGATAAGTTATAACACGGTCATTGATGGGCTTACGAAGGCTGGGAAGACAAAGGAAGCACTAGAGCTGCTCAATGAGATGGTCAGCAAAGGGCTCCAACCAGATATTATCACATACTCGACAATAGCTGCTGGTCTTTGTAGAGAAGATAGAATTGAAGATGCAATTAGGGCATTTGGTAAAGTGCAAGATATGGGCATAAGGCCCAACACTGTGTTGTACAATGCGATAATTCTTGGGCTTTGCAAAAGGCGTGAAACACACAGTGCCATTGATCTTTTCGCTTACATGATAGGGAATGGCTGCATGCCGAATGAATCAACTTACACCATATTGATTGAAGGCTTGGCTTATGAGGGATTGATCAAGGAGGCACGGGATTTGCTGGATGAATTATGTTCGAGAGGTGTTGTAAGGAAGAGCTTGATAAATAAGGGAGCCATTAGACTGCTTGATTGAACTATGAATACATATAAGAGGATCAACTGAGTATCGAGGGTCTGAGAATGAGATTTTGTGCATCTTCGCTCTTCAGCAGGAGAGGAGATTTTACTGGATGTTCACCTAATTGATGTTGCTTTCTTGACAACATGTGAGTCCTTTCATCCACTTCCCACCTTACAGGCTTACAGCCCACTTCAGTCTTCGAGTTGCTTGGAATTTCTGCATAACTCTTGTCTTATTTAACATACTTTACCTTATTGTTGAACATGGTCTCATGTTTCACATTCTTGTCCTTACATGATATATCATACTAGTGTGAGATACATATTAGACCTGTTTTGATTGGGCATTTCTTGCTTCAATATGCTTTAGCACTTCATATGAACTAGCGGAATGAAGGGATATG]
[+] EMBL OSAA31733            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGGAGGATGCCGAGGAGCTCATGGGCGAGATGGGCCAGAAGGGTTGCCCTCCAAATGTGGTAACTTTTAACATGCTCATCAGTTTCTTATGCCGGAAAGGATTGGTTGAGCCAGCACTGGAAGTCCTTGAGCAGATCCCCAAGTACGGTTGCTCACCTAATTCGTTGAGTTACAACCCGCTTCTCCACGCATTCTGCAAGCAAAAAAAGATGGATAAAGCGATGGCGTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]




>consensus_8509#0
CACTGTCCCCCGTGCCCGATGGCCGCGCCCGCGCCCACAGCTTCGCCGCCGCCGCCGCCC
GCCATGTCCGGCCTCCTCTCCTTCGCCTCGTCCCGCCCCTACCCTCCCCTCCCCGCGCCC
AGACCCGCCGCCGCCGCCCCCAGGCCGCGCCTCCGCATAGCGGGTTCCGCCGCCGCGGCC
CCCAACGCCGTGTCCCACCGGGCATCCTCCTCCTTCTCCTCCGGAGACCGCCTCCGCTCG
CTCGTCCGCCGCGGGGAGCTCGACGAGGCGCTCCGCCTCGTCGGGTCCGCGCGGAGGCCC
GACGCGGGCACCTGCGCCGCGCTCATCAAGAAGCTCAGCGCGTCGGGGCGCACCGCGGAG
GCCCGCCGCGTGCTGGCCGCGTGCGGCCCCGACGTCATGGCGTACAACGCCATGGTGGCC
GGGTACTGCGGCGCGGGGCAGCTCGACGCCGCGCGGCGGCTCGTCGCGGAGATGCCCGTG
GAGCCCGACGCCTACACCTACAACACGCTCATCCGAGGCCTCTGCGGACGCGGCCGGACC
GCGAACGCGCTGGCGGTGCTCGACGAAATGCTCCGCCGGCGATGTGTGCCGGACGTGGTC
ACCTACACCATCCTCCTCGAGGCCACGTGCAAGAGGAGCGGGTACAAGCAGGCCATGAAG
CTTCTCGACGAGATGCGAGATAAGGGGTGCACCCCGGACATTGTCACCTACAACGTCGTT
GTCAATGGAATCTGCCAAGAAGGACGGGTTGACGATGCCATTGAGTTCTTGAAGAACCTC
CCGTCATATGGCTGTGAACCAAACACAGTTAGCTATAACATTGTGTTGAAGGGCCTGTGT
ACCGCGGAGCGATGGGAGGATGCCGAGGAGCTCATGGGCGAGATGGGCCAGAAGGGTTGC
CCTCCAAATGTGGTAACTTTTAACATGCTCATCAGTTTCTTATGCCGGAAAGGATTGGTT
GAGCCAGCACTGGAAGTCCTTGAGCAGATCCCCAAGTACGGTTGCACACCTAATTCGTTG
AGTTACAACCCGCTTCTCCACGCATTCTGCAAGCAAAAAAAGATGGATAAAGCGATGGCG
TTTTTGGATTTGATGGTGTCCAGAGGCTGTTATCCAGACATCGTTTCATACAACACTCTA
CTTACTGCACTCTGCCGCAGTGGTGAGGTTGACGTCGCTGTTGAATTGCTTCATCAACTC
AAGGACAAGGGCTGCGCTCCTGTCTTGATAAGTTATAACACGGTCATTGATGGGCTTACG
AAGGCTGGGAAGACAAAGGAAGCACTAGAGCTGCTCAATGAGATGGTCAGCAAAGGGCTC
CAACCAGATATTATCACATACTCGACAATAGCTGCTGGTCTTTGTAGAGAAGATAGAATT
GAAGATGCAATTAGGGCATTTGGTAAAGTGCAAGATATGGGCATAAGGCCCAACACTGTG
TTGTACAATGCGATAATTCTTGGGCTTTGCAAAAGGCGTGAAACACACAGTGCCATTGAT
CTTTTCGCTTACATGATAGGGAATGGCTGCATGCCGAATGAATCAACTTACACCATATTG
ATTGAAGGCTTGGCTTATGAGGGATTGATCAAGGAGGCACGGGATTTGCTGGATGAATTA
TGTTCGAGAGGTGTTGTAAGGAAGAGCTTGATAAATAAGGGAGCCATTAGACTGCTTGAT
TGAACTATGAATACATATAAGAGGATCAACTGAGTATCGAGGGTCTGAGAATGAGATTTT
GTGCATCTTCGCTCTTCAGCAGGAGAGGAGATTTTACTGGATGTTCACCTAATTGATGTT
GCTTTCTTGACAACATGTGAGTCCTTTCATCCACTTCCCACCTTACAGGCTTACAGCCCA
CTTCAGTCTTCGAGTTGCTTGGAATTTCTGCATAACTCTTGTCTTATTTAACATACTTTA
CCTTATTGTTGAACATGGTCTCATGTTTCACATTCTTGTCCTTACATGATATATCATACT
AGTGTGAGATACATATTAGACCTGTTTTGATTGGGCATTTCTTGCTTCAATATGCTTTAG
CACTTCATATGAACTAGCGGAATGAAGGGATATG

consensusID : consensus_8509#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1876
fasta sequence

                              [CTTTGGCGCGGAAAGAGGGGGAGCTCCCGCCATTCCCCACCATTAACCTCTTCTCCCGGGGAACAAAACACCGCTGTTCTTCCCTTTGCCCCGCCTCGATCGATCGCCATCGATCGATCTCGTGCGGGAAGCGATCGATCTCGTGCGGGAATCTTTGGGGGAGGGATTTAATCTGTTGGTGTGCACGCGAGGAATTAATCGAAAATGGTTTGCAGGTCGTGCGCGATGATCCGCTGAGCGGGGGGCGGCCACCAGATCAGCCCGCGCATCCAACTCCGGCGAGAGGAGGAGGAGGAAGAAGAAGATGTCTTGCTGCGGAGGCGCCGAGGAGGACAGCTACGGCCCGCCGGCGAACCAGGCCGCTCCGCCGCCCAACGTCAATGCTCCAGGGAATAGAGGCGGGCCGAGAGGGCCGGGGGCGGCGCGGCCGGGCGGGCCGCCGAAGCCGGTGAACATCGACGTGCCGGCGATACCGTTCGAGGAGCTGAAGAAGATCACCAGCAACTTCAGCGACCGCGCCCTCATCGGCGAGGGCTCCTACGGCCGCGTCTACAACGGCACGCTCAGCGACGGCCGCGCCGCCGTCATCAAGAAGCTCGACCCCGGCGCCTCCCAGGAGACCGACTCCGAGTTCTCCGCCCAGATAGCGATGGTGTCCAAGCTCAAGAACGAGTACTTCCTGGAGCTCTTGGGCTACTGCTTGGAAGACGGCAACCGCATGCTGGCCTACCAGTTTGCAACCATGGGTTCTTTACACAACATTCTTCACGGTAAGAAGGGAGTCCAGGGCGCGGAGCCCGGCCCGGTTCTGAACTGGGCGCAACGGGTCAAGATAGCTTATGGGGCGGCGAGAGGGCTGGAGTACCTCCATGAGAAAGTGCAGCCATCGATCGTTCATCGAGATGTTCGGTCTAGCAATGTTCTTATATTCGACGAGTTCAGCTCGAAGATCGCCGATTTCAACCTGACGAACCAGGGCACCGACACCGCTGCCCGGTTGCATTCGACTAGGGTGCTAGGAACATTTGGATACCATGCTCCAGAATATGCCATGACAGGGCAAATAAATCAGAAGAGCGATGTTTACAGCTTTGGCGTGATTCTATTGGAGCTACTAACCGGAAGGAAACCAGTTGATCACACCATGCCAAAAGGGCAACAAAGTCTTGTCACTTGGGCTACTCCAAGATTGAGCGAAGATAAAGTTAAGCAGTGCGTCGATCCAAAGCTCAACAATGATTACCCTCCGAAGGCTGTCGCAAAGCTAGCAGCAGTTGCAGCATTGTGCGTTCAGTACGAAGCCGACTTCCGACCGAACATGACGATCGTCGTGAAGGCAATCCAGCCTCTTCTGAATACAAAACCAGCTGGGCCTGCAGAGCCACCACCTGCCTGATCAGATTGTATGGGAGTTCTGCTCTAGGCAGACAGGGGAAAAAAAACCACACAAACTTTGCATGGTTTCCTGTGTTTTCACATCAGGCAGTGTATGTTTTAAGAAGCCATGCAACTTGGAGGAGCACCAATTCGGCATGATTTTTTGTAAAACACTGATCCATTGGTACCACAGGGTATATTACATATAGAGGGGGTATTTTGCTAACTGGTGTAATGAATTAAGTTATTCTTTGTCGTGTCATGGTGTAATTTTAAGGTCCTTCAAAAGCTTGCATAGAACCAAGGATTGCATGATGCATTCCCAAGAACTTCCATGGCTGCCTCTTTTTCTTATATTTGTATAGAACTTTGGAATTAATAGTAGTTTTTCTTCTTCTTTTTTTCTGTTGGAACTACAAAGCTGGGGCTAAAATCCTGTTCCTGAATTCAGGTTTTGGCCAGGATGGAGATTAAATGGTGCACATTGCATAGATGTACA]

[+] EMBL AK072522             [CTTTGGCGCGGAAAGAGGGGGAGCTCCCGCCATTCCCCACCATTAACCTCTTCTCCCGGGGAACAAAACACCGCTGTTCTTCCCTTTGCCCCGCCTCGATCGATCGCCATCGATCGATCTCGTGCGGGAAGCGATCGATCTCGTGCGGGAATCTTTGGGGGAGGGATTTAATCTGTTGGTGTGCACGCGAGGAATTAATCGAAAATGGTTTGCAGGTCGTGCGCGATGATCCGCTGAGCGGGGGGCGGCCACCAGATCAGCCCGCGCATCCAACTCCGGCGAGAGGAGGAGGAGGAAGAAGAAGATGTCTTGCTGCGGAGGCGCCGAGGAGGACAGCTACGGCCCGCCGGCGAACCAGGCCGCTCCGCCGCCCAACGTCAATGCTCCAGGGAATAGAGGCGGGCCGAGAGGGCCGGGGGCGGCGCGGCCGGGCGGGCCGCCGAAGCCGGTGAACATCGACGTGCCGGCGATACCGTTCGAGGAGCTGAAGAAGATCACCAGCAACTTCAGCGACCGCGCCCTCATCGGCGAGGGCTCCTACGGCCGCGTCTACAACGGCACGCTCAGCGACGGCCGCGCCGCCGTCATCAAGAAGCTCGACCCCGGCGCCTCCCAGGAGACCGACTCCGAGTTCTCCGCCCAGATAGCGATGGTGTCCAAGCTCAAGAACGAGTACTTCCTGGAGCTCTTGGGCTACTGCTTGGAAGACGGCAACCGCATGCTGGCCTACCAGTTTGCAACCATGGGTTCTTTACACAACATTCTTCACGGTAAGAAGGGAGTCCAGGGCGCGGAGCCCGGCCCGGTTCTGAACTGGGCGCAACGGGTCAAGATAGCTTATGGGGCGGCGAGAGGGCTGGAGTACCTCCATGAGAAAGTGCAGCCATCGATCGTTCATCGAGATGTTCGGTCTAGCAATGTTCTTATATTCGACGAGTTCAGCTCGAAGATCGCCGATTTCAACCTGACGAACCAGGGCACCGACACCGCTGCCCGGTTGCATTCGACTAGGGTGCTAGGAACATTTGGATACCATGCTCCAGAATATGCCATGACAGGGCAAATAAATCAGAAGAGCGATGTTTACAGCTTTGGCGTGATTCTATTGGAGCTACTAACCGGAAGGAAACCAGTTGATCACACCATGCCAAAAGGGCAACAAAGTCTTGTCACTTGGGCTACTCCAAGATTGAGCGAAGATAAAGTTAAGCAGTGCGTCGATCCAAAGCTCAACAATGATTACCCTCCGAAGGCTGTCGCAAAGCTAGCAGCAGTTGCAGCATTGTGCGTTCAGTACGAAGCCGACTTCCGACCGAACATGACGATCGTCGTGAAGGCAATCCAGCCTCTTCTGAATACAAAACCAGCTGGGCCTGCAGAGCCACCACCTGCCTGATCAGATTGTATGGGAGTTCTGCTCTAGGCAGACAGGGGAAAAAAAACCACACAAACTTTGCATGGTTTCCTGTGTTTTCACATCAGGCAGTGTATGTTTTAAGAAGCCATGCAACTTGGAGGAGCACCAATTCGGCATGATTTTTTGTAAAACACTGATCCATTGGTACCACAGGGTATATTACATATAGAGGGGGTATTTTGCTAACTGGTGTAATGAATTAAGTTATTCTTTGTCGTGTCATGGTGTAATTTTAAGGTCCTTCAAAAGCTTGCATAGAACCAAGGATTGCATGATGCATTCCCAAGAACTTCCATGGCTGCCTCTTTTTCTTATATTTGTATAGAACTTTGGAATTAATAGTAGTTTTTCTTCTTCTTTTTTTCTGTTGGAACTACAAAGCTGGGGCTAAAATCCTGTTCCTGAATTCAGGTTTTGGCCAGGATGGAGATTAAATGGTGCACATTGCATAGATGTACA]




>consensus_8509#1
CTTTGGCGCGGAAAGAGGGGGAGCTCCCGCCATTCCCCACCATTAACCTCTTCTCCCGGG
GAACAAAACACCGCTGTTCTTCCCTTTGCCCCGCCTCGATCGATCGCCATCGATCGATCT
CGTGCGGGAAGCGATCGATCTCGTGCGGGAATCTTTGGGGGAGGGATTTAATCTGTTGGT
GTGCACGCGAGGAATTAATCGAAAATGGTTTGCAGGTCGTGCGCGATGATCCGCTGAGCG
GGGGGCGGCCACCAGATCAGCCCGCGCATCCAACTCCGGCGAGAGGAGGAGGAGGAAGAA
GAAGATGTCTTGCTGCGGAGGCGCCGAGGAGGACAGCTACGGCCCGCCGGCGAACCAGGC
CGCTCCGCCGCCCAACGTCAATGCTCCAGGGAATAGAGGCGGGCCGAGAGGGCCGGGGGC
GGCGCGGCCGGGCGGGCCGCCGAAGCCGGTGAACATCGACGTGCCGGCGATACCGTTCGA
GGAGCTGAAGAAGATCACCAGCAACTTCAGCGACCGCGCCCTCATCGGCGAGGGCTCCTA
CGGCCGCGTCTACAACGGCACGCTCAGCGACGGCCGCGCCGCCGTCATCAAGAAGCTCGA
CCCCGGCGCCTCCCAGGAGACCGACTCCGAGTTCTCCGCCCAGATAGCGATGGTGTCCAA
GCTCAAGAACGAGTACTTCCTGGAGCTCTTGGGCTACTGCTTGGAAGACGGCAACCGCAT
GCTGGCCTACCAGTTTGCAACCATGGGTTCTTTACACAACATTCTTCACGGTAAGAAGGG
AGTCCAGGGCGCGGAGCCCGGCCCGGTTCTGAACTGGGCGCAACGGGTCAAGATAGCTTA
TGGGGCGGCGAGAGGGCTGGAGTACCTCCATGAGAAAGTGCAGCCATCGATCGTTCATCG
AGATGTTCGGTCTAGCAATGTTCTTATATTCGACGAGTTCAGCTCGAAGATCGCCGATTT
CAACCTGACGAACCAGGGCACCGACACCGCTGCCCGGTTGCATTCGACTAGGGTGCTAGG
AACATTTGGATACCATGCTCCAGAATATGCCATGACAGGGCAAATAAATCAGAAGAGCGA
TGTTTACAGCTTTGGCGTGATTCTATTGGAGCTACTAACCGGAAGGAAACCAGTTGATCA
CACCATGCCAAAAGGGCAACAAAGTCTTGTCACTTGGGCTACTCCAAGATTGAGCGAAGA
TAAAGTTAAGCAGTGCGTCGATCCAAAGCTCAACAATGATTACCCTCCGAAGGCTGTCGC
AAAGCTAGCAGCAGTTGCAGCATTGTGCGTTCAGTACGAAGCCGACTTCCGACCGAACAT
GACGATCGTCGTGAAGGCAATCCAGCCTCTTCTGAATACAAAACCAGCTGGGCCTGCAGA
GCCACCACCTGCCTGATCAGATTGTATGGGAGTTCTGCTCTAGGCAGACAGGGGAAAAAA
AACCACACAAACTTTGCATGGTTTCCTGTGTTTTCACATCAGGCAGTGTATGTTTTAAGA
AGCCATGCAACTTGGAGGAGCACCAATTCGGCATGATTTTTTGTAAAACACTGATCCATT
GGTACCACAGGGTATATTACATATAGAGGGGGTATTTTGCTAACTGGTGTAATGAATTAA
GTTATTCTTTGTCGTGTCATGGTGTAATTTTAAGGTCCTTCAAAAGCTTGCATAGAACCA
AGGATTGCATGATGCATTCCCAAGAACTTCCATGGCTGCCTCTTTTTCTTATATTTGTAT
AGAACTTTGGAATTAATAGTAGTTTTTCTTCTTCTTTTTTTCTGTTGGAACTACAAAGCT
GGGGCTAAAATCCTGTTCCTGAATTCAGGTTTTGGCCAGGATGGAGATTAAATGGTGCAC
ATTGCATAGATGTACA

consensusID : consensus_8509#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1618
fasta sequence

                              [AAGAGGAGCGGGTACAAGCAGGCCATGAAGCTTCTCGACGAGATGCGAGATAAGGGGTGCACCCCGGACATTGTCACCTACAACGTCGTTGTCAATGGAATCTGCCAAGAAGGACGGGTTGACGATGCCATTGAGTTCTTGAAGAACCTCCCGTCATATGGCTGTGAACCAAACACAGTTAGCTATAACATTGTGTTGAAGGGCCTGTGTACCGCGGAGCGATGGGAGGATGCCGAGGAGCTCATGGGCGAGATGGGCCAGAAGGGTTGCCCTCCAAATGTGGTAACTTTTAACATGCTCATCAGTTTCTTATGCCGGAAAGGATTGGTTGAGCCAGCACTGGAAGTCCTTGAGCAGATTCCCAAGTACGGTTGCACACCTAATTCGTTGAGTTACAACCCGCTTCTCCACGCATTCTGCAAGCAAAAAAAGATGGATAAAGCGATGGCGTTTTTGGATTTGATGGTGTCCAGAGGCTGTTATCCAGACATCGTTTCATACAACACTCTACTTACTGCACTCTGCCGCAGTGGTGAGGTTGACGTCGCTGTTGAATTGCTTCATCAACTCAAGGACAAGGGCTGCGCTCCTGTCTTGATAAGTTATAACACGGTCATTGATGGGCTTACGAAGGCTGGGAAGACAAAGGAAGCACTAGAGCTGCTCAATGAGATGGTCAGCAAAGGGCTCCAACCAGATATTATCACATACTCGACAATAGCTGCTGGTCTTTGTAGAGAAGATAGAATTGAAGATGCAATTAGGGCATTTGGTAAAGTGCAAGATATGGGCATAAGGCCCAACACTGTGTTGTACAATGCGATAATTCTTGGGCTTTGCAAAAGGCGTGAAACACACAGTGCCATTGATCTTTTCGCTTACATGATAGGGAATGGCTGCATGCCGAATGAATCAACTTACACCATATTGATTGAAGGCTTGGCTTATGAGGGATTGATCAAGGAGGCACGGGATTTGCTGGATGAATTATGTTCGAGAGGTGTTGTAAGGAAGAGCTTGATAAATAAGGGAGCCATTAGACTGCTTGATTGAACTATGAATACATATAAGAGGATCAACTGAGTATCGAGGGTCTGAGAATGAGATTTTGTGCATCTTCGCTCTTCAGCAGGAGAGGAGATTTTACTGGATGTTCACCTAATTGATGTTGCTTTCTTGACAACATTCTTGCCGTGCTCAAATGCTAATGGAGGTCCTTTTCTCAGATTGCCACCAGAAGGCCCAGCTGGTTTTGTATTCAGAAGAGGCTGGATTGCCTTCACGACGATCGTCATGTTCGGTCGGAAGTCGGCTTCGTACTGAACGCACAATGCTGCAACTGCTGCTAGCTGAAAAAAAATCTTGAAAGAAAAAACAATGGCACTCACTGCTGCTTTCTGAATTTTGTCAGATTTGCTACAGTATAGCTACCTTTGCGACAGCCTTCGGAGGGTAATCATTGTTGAGCTTTGGATCGACGCACTGCTTAACTTTATCTTCGCTCAATCTTGGAGTAGCCTGCCTCACAAAGATCATGGTATATGTAAGATCATTGGAAATGGAAAGATTGAAATAGGATATATTGTAATAAGTTATCTTTTGTTGAAGGATAAAACTT]

[+] EMBL AK073055             [AAGAGGAGCGGGTACAAGCAGGCCATGAAGCTTCTCGACGAGATGCGAGATAAGGGGTGCACCCCGGACATTGTCACCTACAACGTCGTTGTCAATGGAATCTGCCAAGAAGGACGGGTTGACGATGCCATTGAGTTCTTGAAGAACCTCCCGTCATATGGCTGTGAACCAAACACAGTTAGCTATAACATTGTGTTGAAGGGCCTGTGTACCGCGGAGCGATGGGAGGATGCCGAGGAGCTCATGGGCGAGATGGGCCAGAAGGGTTGCCCTCCAAATGTGGTAACTTTTAACATGCTCATCAGTTTCTTATGCCGGAAAGGATTGGTTGAGCCAGCACTGGAAGTCCTTGAGCAGATTCCCAAGTACGGTTGCACACCTAATTCGTTGAGTTACAACCCGCTTCTCCACGCATTCTGCAAGCAAAAAAAGATGGATAAAGCGATGGCGTTTTTGGATTTGATGGTGTCCAGAGGCTGTTATCCAGACATCGTTTCATACAACACTCTACTTACTGCACTCTGCCGCAGTGGTGAGGTTGACGTCGCTGTTGAATTGCTTCATCAACTCAAGGACAAGGGCTGCGCTCCTGTCTTGATAAGTTATAACACGGTCATTGATGGGCTTACGAAGGCTGGGAAGACAAAGGAAGCACTAGAGCTGCTCAATGAGATGGTCAGCAAAGGGCTCCAACCAGATATTATCACATACTCGACAATAGCTGCTGGTCTTTGTAGAGAAGATAGAATTGAAGATGCAATTAGGGCATTTGGTAAAGTGCAAGATATGGGCATAAGGCCCAACACTGTGTTGTACAATGCGATAATTCTTGGGCTTTGCAAAAGGCGTGAAACACACAGTGCCATTGATCTTTTCGCTTACATGATAGGGAATGGCTGCATGCCGAATGAATCAACTTACACCATATTGATTGAAGGCTTGGCTTATGAGGGATTGATCAAGGAGGCACGGGATTTGCTGGATGAATTATGTTCGAGAGGTGTTGTAAGGAAGAGCTTGATAAATAAGGGAGCCATTAGACTGCTTGATTGAACTATGAATACATATAAGAGGATCAACTGAGTATCGAGGGTCTGAGAATGAGATTTTGTGCATCTTCGCTCTTCAGCAGGAGAGGAGATTTTACTGGATGTTCACCTAATTGATGTTGCTTTCTTGACAACATTCTTGCCGTGCTCAAATGCTAATGGAGGTCCTTTTCTCAGATTGCCACCAGAAGGCCCAGCTGGTTTTGTATTCAGAAGAGGCTGGATTGCCTTCACGACGATCGTCATGTTCGGTCGGAAGTCGGCTTCGTACTGAACGCACAATGCTGCAACTGCTGCTAGCTGAAAAAAAATCTTGAAAGAAAAAACAATGGCACTCACTGCTGCTTTCTGAATTTTGTCAGATTTGCTACAGTATAGCTACCTTTGCGACAGCCTTCGGAGGGTAATCATTGTTGAGCTTTGGATCGACGCACTGCTTAACTTTATCTTCGCTCAATCTTGGAGTAGCCTGCCTCACAAAGATCATGGTATATGTAAGATCATTGGAAATGGAAAGATTGAAATAGGATATATTGTAATAAGTTATCTTTTGTTGAAGGATAAAACTT]




>consensus_8509#2
AAGAGGAGCGGGTACAAGCAGGCCATGAAGCTTCTCGACGAGATGCGAGATAAGGGGTGC
ACCCCGGACATTGTCACCTACAACGTCGTTGTCAATGGAATCTGCCAAGAAGGACGGGTT
GACGATGCCATTGAGTTCTTGAAGAACCTCCCGTCATATGGCTGTGAACCAAACACAGTT
AGCTATAACATTGTGTTGAAGGGCCTGTGTACCGCGGAGCGATGGGAGGATGCCGAGGAG
CTCATGGGCGAGATGGGCCAGAAGGGTTGCCCTCCAAATGTGGTAACTTTTAACATGCTC
ATCAGTTTCTTATGCCGGAAAGGATTGGTTGAGCCAGCACTGGAAGTCCTTGAGCAGATT
CCCAAGTACGGTTGCACACCTAATTCGTTGAGTTACAACCCGCTTCTCCACGCATTCTGC
AAGCAAAAAAAGATGGATAAAGCGATGGCGTTTTTGGATTTGATGGTGTCCAGAGGCTGT
TATCCAGACATCGTTTCATACAACACTCTACTTACTGCACTCTGCCGCAGTGGTGAGGTT
GACGTCGCTGTTGAATTGCTTCATCAACTCAAGGACAAGGGCTGCGCTCCTGTCTTGATA
AGTTATAACACGGTCATTGATGGGCTTACGAAGGCTGGGAAGACAAAGGAAGCACTAGAG
CTGCTCAATGAGATGGTCAGCAAAGGGCTCCAACCAGATATTATCACATACTCGACAATA
GCTGCTGGTCTTTGTAGAGAAGATAGAATTGAAGATGCAATTAGGGCATTTGGTAAAGTG
CAAGATATGGGCATAAGGCCCAACACTGTGTTGTACAATGCGATAATTCTTGGGCTTTGC
AAAAGGCGTGAAACACACAGTGCCATTGATCTTTTCGCTTACATGATAGGGAATGGCTGC
ATGCCGAATGAATCAACTTACACCATATTGATTGAAGGCTTGGCTTATGAGGGATTGATC
AAGGAGGCACGGGATTTGCTGGATGAATTATGTTCGAGAGGTGTTGTAAGGAAGAGCTTG
ATAAATAAGGGAGCCATTAGACTGCTTGATTGAACTATGAATACATATAAGAGGATCAAC
TGAGTATCGAGGGTCTGAGAATGAGATTTTGTGCATCTTCGCTCTTCAGCAGGAGAGGAG
ATTTTACTGGATGTTCACCTAATTGATGTTGCTTTCTTGACAACATTCTTGCCGTGCTCA
AATGCTAATGGAGGTCCTTTTCTCAGATTGCCACCAGAAGGCCCAGCTGGTTTTGTATTC
AGAAGAGGCTGGATTGCCTTCACGACGATCGTCATGTTCGGTCGGAAGTCGGCTTCGTAC
TGAACGCACAATGCTGCAACTGCTGCTAGCTGAAAAAAAATCTTGAAAGAAAAAACAATG
GCACTCACTGCTGCTTTCTGAATTTTGTCAGATTTGCTACAGTATAGCTACCTTTGCGAC
AGCCTTCGGAGGGTAATCATTGTTGAGCTTTGGATCGACGCACTGCTTAACTTTATCTTC
GCTCAATCTTGGAGTAGCCTGCCTCACAAAGATCATGGTATATGTAAGATCATTGGAAAT
GGAAAGATTGAAATAGGATATATTGTAATAAGTTATCTTTTGTTGAAGGATAAAACTT

consensusID : consensus_8509#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 641
fasta sequence

                              [ACTCTGCTTACTGCACTCTGCCGCAGTGGTGAGGTTGACGTCGCTGTTGAATTGCTTCATCAACTCAAGGACAAGGGCTGCGCTCCTGTCTTGATAAGTTATAACACGGTCATTGATGGGCTTACGAAGGCTGGGAAGACAAAGGAAGCACTAGAGCTGCTCAATGAGATGGTCAGCAAAGGGCTCCAACCAGATATTATAACATACTCGACAATAGCTGCTGGTCTTTGTAGANAANATAGAATTGAAGATGCAATTAGGGCATTTGGTAAAGTGCAAGATATGGGCATAAGGCCCAACACTGTGTTGTACAATGCGATAATTCTTGGGCTTTGCAAAAGGCGTTTAAACACACAGTGCCATTGATCTTTTCGCTTACATGATAGGGAATGGCTGCATGCCCGAATTGAATCCAACTTACACCATATTGATTGAAGGCTTGGCTTTATGANGGATTGATTCAAGGANGCACGGGATTTGCTGGAATGAATTATNTTCNAAAAGTTGTTTTTTAGGAAAGAACTTGATAAATAAGGGAACCATTAACTGCTTTGATTGAACTTATGAATACCTATAAAAGATTCACTTGAATTNTCCAAGGTCTGAAAATGAAATTTGTTCATCTTTGCTCCTCCCCCANG]

[+] EMBL AF074743             [ACTCTGCTTACTGCACTCTGCCGCAGTGGTGAGGTTGACGTCGCTGTTGAATTGCTTCATCAACTCAAGGACAAGGGCTGCGCTCCTGTCTTGATAAGTTATAACACGGTCATTGATGGGCTTACGAAGGCTGGGAAGACAAAGGAAGCACTAGAGCTGCTCAATGAGATGGTCAGCAAAGGGCTCCAACCAGATATTATAACATACTCGACAATAGCTGCTGGTCTTTGTAGANAANATAGAATTGAAGATGCAATTAGGGCATTTGGTAAAGTGCAAGATATGGGCATAAGGCCCAACACTGTGTTGTACAATGCGATAATTCTTGGGCTTTGCAAAAGGCGTTTAAACACACAGTGCCATTGATCTTTTCGCTTACATGATAGGGAATGGCTGCATGCCCGAATTGAATCCAACTTACACCATATTGATTGAAGGCTTGGCTTTATGANGGATTGATTCAAGGANGCACGGGATTTGCTGGAATGAATTATNTTCNAAAAGTTGTTTTTTAGGAAAGAACTTGATAAATAAGGGAACCATTAACTGCTTTGATTGAACTTATGAATACCTATAAAAGATTCACTTGAATTNTCCAAGGTCTGAAAATGAAATTTGTTCATCTTTGCTCCTCCCCCANG]




>consensus_8509#3
ACTCTGCTTACTGCACTCTGCCGCAGTGGTGAGGTTGACGTCGCTGTTGAATTGCTTCAT
CAACTCAAGGACAAGGGCTGCGCTCCTGTCTTGATAAGTTATAACACGGTCATTGATGGG
CTTACGAAGGCTGGGAAGACAAAGGAAGCACTAGAGCTGCTCAATGAGATGGTCAGCAAA
GGGCTCCAACCAGATATTATAACATACTCGACAATAGCTGCTGGTCTTTGTAGANAANAT
AGAATTGAAGATGCAATTAGGGCATTTGGTAAAGTGCAAGATATGGGCATAAGGCCCAAC
ACTGTGTTGTACAATGCGATAATTCTTGGGCTTTGCAAAAGGCGTTTAAACACACAGTGC
CATTGATCTTTTCGCTTACATGATAGGGAATGGCTGCATGCCCGAATTGAATCCAACTTA
CACCATATTGATTGAAGGCTTGGCTTTATGANGGATTGATTCAAGGANGCACGGGATTTG
CTGGAATGAATTATNTTCNAAAAGTTGTTTTTTAGGAAAGAACTTGATAAATAAGGGAAC
CATTAACTGCTTTGATTGAACTTATGAATACCTATAAAAGATTCACTTGAATTNTCCAAG
GTCTGAAAATGAAATTTGTTCATCTTTGCTCCTCCCCCANG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8509#2      ------------------------------------------------------------
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      CACTGTCCCCCGTGCCCGATGGCCGCGCCCGCGCCCACAGCTTCGCCGCCGCCGCCGCCC 60
consensus_8509#1      --------CTTTGGCGCGGAAAGAGGGGGAGCTCCCGCCATTCC----CCACCATTAACC 48
                                                                                  

consensus_8509#2      ------------------------------------------------------------
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      GCCATGTCCGGCCTCCTCTCCTTCGCCTCGTCCCGCCCCTACCCTCCCCTCCCCGCGCCC 120
consensus_8509#1      TCTTCTCCCGGGGAACAAAACACCGCT--GTTCTTCCCTTTGCCCCGCCTCGATCGATCG 106
                                                                                  

consensus_8509#2      ------------------------------------------------------------
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      AGACCCGCCGCCGCCGCCCCCAGGCCGCGCCTCCGCATAGCGGGTTCCGCCGCCGCGGCC 180
consensus_8509#1      CCATCGATCGATCTCGTGCGGGAAGCGATCGATCTCGTGCGGGAATCTTTGGGGGAGGGA 166
                                                                                  

consensus_8509#2      ------------------------------------------------------------
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      CCCAACGCC---GTGTCCCACCGGGCATCCTCCTCCTTCTCCTCCGGAGACCGCCTCCGC 237
consensus_8509#1      TTTAATCTGTTGGTGTGCACGCGAGGAATTAATCGAAAATGGTTTGCAGGTCGTGCGCGA 226
                                                                                  

consensus_8509#2      ------------------------------------------------------------
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      TCGCTCGTCCGCCGCGGGGAGCTCGACGAGGCGCTCCGCCTCGTCGGGTCCGCGCGGAGG 297
consensus_8509#1      TGATCCGCTGAGCGGGGGGCGGCCACCAGATCAGCCCGCGCATCCAACTCCGGCGAGAGG 286
                                                                                  

consensus_8509#2      ------------------------------------------------------------
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      CCCGACGCGGGCACCTGCGCCGCGCTCATCAAGAAGCTCAGCGCGTCGGGGCGCACCGCG 357
consensus_8509#1      AGGAGGAGGAAGAAGAAGATGTCTTGCTGCGGAGGCGCCGAGGAGGACAGCTACGGCCCG 346
                                                                                  

consensus_8509#2      ------------------------------------------------------------
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      GAGGCCCGCCGCGTGCTGGCCGCGTGCGGCCCCGACGTCATGGCGTACAACGCCATGGTG 417
consensus_8509#1      CCGGCGAACCAGGCCGCTCCGCCGCCCAACGTCAATGCTCCAGGGAATAGAGGCGGGCCG 406
                                                                                  

consensus_8509#2      ------------------------------------------------------------
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      GCCGGGTACTGCGGCGCGGGGCAGCTCGACGCCGCGCGGCGGCTCGTCGCGGAGATGCCC 477
consensus_8509#1      AGAGGGCCGGGGGCGGCGCGGCCGGGCGGGCCGCCGAAGCCGGTGAACATCGACGTGCCG 466
                                                                                  

consensus_8509#2      ------------------------------------------------------------
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      GTGGAGCCCGACGCCTACACCTACAACACGCTCATCCGAGGCCTCTGCGGACGCGGCCGG 537
consensus_8509#1      GCGATACCGTTCG---AGGAGCTGAAGAAGATCACCAGCAACTTCAGCGACCGCGCCCTC 523
                                                                                  

consensus_8509#2      ------------------------------------------------------------
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      ACCGCGAACGCGCTGGCGGTGCTCGACGAAATGCTCCGCCGGCGATGTGTGCCGGACGTG 597
consensus_8509#1      ATCGGCGAGGGCTCCTACGGCCGCGTCTACAACGGCACGCTCAGCGACGGCCGCGCCGCC 583
                                                                                  

consensus_8509#2      ---------------------------------AAGAGGAGCGGGTACAAGCAGGCCATG 27
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      GTCACCTACACCATCCTCCTCGAGGCCACGTGCAAGAGGAGCGGGTACAAGCAGGCCATG 657
consensus_8509#1      GTCATCAAGAAGCTCGACCCCGGCGCCTCCCAGGAGACCGACTCCGAGTTCTCCGCCCAG 643
                                                                                  

consensus_8509#2      AAGCTTCTCGACGAGATGCGAGATAAGGGGTGCACCCCGGACATTGTCACCTACAACGTC 87
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      AAGCTTCTCGACGAGATGCGAGATAAGGGGTGCACCCCGGACATTGTCACCTACAACGTC 717
consensus_8509#1      ATAGCGATGGTGTCCAAGCTCAAGAACGAGTACTTCCTGGAGCTCTTGGGCTACTGCTTG 703
                                                                                  

consensus_8509#2      GTTGTCAATGGAATCTGCCAAGAAGGACGGGTTGACGATGCCATTGAGTTCTTGAAGAAC 147
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      GTTGTCAATGGAATCTGCCAAGAAGGACGGGTTGACGATGCCATTGAGTTCTTGAAGAAC 777
consensus_8509#1      GAAGACGGCAACCGCATGCTGGCCTACCAGTTTGCAACCATGGGTTCTTTACACAACATT 763
                                                                                  

consensus_8509#2      CTCCCGTCATATGGCTGTGAACCAAACACAG--------TTAGCTATAACATTGTGTTGA 199
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      CTCCCGTCATATGGCTGTGAACCAAACACAG--------TTAGCTATAACATTGTGTTGA 829
consensus_8509#1      CTTCACGGTAAGAAGGGAGTCCAGGGCGCGGAGCCCGGCCCGGTTCTGAACTGGGCGCAA 823
                                                                                  

consensus_8509#2      AGGGCCTGTGTACCGCGGAGCGATGGGAGGATGCCGAGGAGCTCATGGGCGAGATGGGCC 259
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      AGGGCCTGTGTACCGCGGAGCGATGGGAGGATGCCGAGGAGCTCATGGGCGAGATGGGCC 889
consensus_8509#1      CGGGTCAAGATAGCTTATGGGGCGGCGAGAGGGCTGGAGTACCTCCATGAGAAAGTGCAG 883
                                                                                  

consensus_8509#2      AGAAGGGTTGCCC-TCCAAATGTGGTAACTTTTAACATGCTCATCAGTTTCTTATGCCGG 318
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      AGAAGGGTTGCCC-TCCAAATGTGGTAACTTTTAACATGCTCATCAGTTTCTTATGCCGG 948
consensus_8509#1      CCATCGATCGTTCATCGAGATGTTCGGTCTAGCAATGTTCTTATATTCGACGAGTTCAGC 943
                                                                                  

consensus_8509#2      A-AAGGATTGGTTGAGCCAGCACTGGAAGTCCTTGAGCAGATTCCCAAGTACGGTTGCAC 377
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      A-AAGGATTGGTTGAGCCAGCACTGGAAGTCCTTGAGCAGATCCCCAAGTACGGTTGCAC 1007
consensus_8509#1      TCGAAGATCGCCGATTTCAACCTGACGAACCAGGGCACCGACACCGCTGCCCGGTTGCAT 1003
                                                                                  

consensus_8509#2      ACCTAATTCGTTGAGTTACAACCCGCTTCTCCACGCATTCTGCAAGCAAAAAAAGATGGA 437
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      ACCTAATTCGTTGAGTTACAACCCGCTTCTCCACGCATTCTGCAAGCAAAAAAAGATGGA 1067
consensus_8509#1      TC---GACTAGGGTGCTAGGAACATTTGGATACCATGCTCCAGAATATGCCATGACAGGG 1060
                                                                                  

consensus_8509#2      TAAAGCGATGGCGTTTTTGGATTTGATGGTGTCCAGAGGCTGTTATCCAGACATCGTTTC 497
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      TAAAGCGATGGCGTTTTTGGATTTGATGGTGTCCAGAGGCTGTTATCCAGACATCGTTTC 1127
consensus_8509#1      CAAATAAATCAGAAGAGCGATGTTTACAGCTTTGGCGTGATTCTATTGGAGCTACTAACC 1120
                                                                                  

consensus_8509#2      ATACAACACTCTACTTACTGCACTCTGCCGCAGTGGTGAGGTTGACGTCGCTGTTGAATT 557
consensus_8509#3      -------ACTCTGCTTACTGCACTCTGCCGCAGTGGTGAGGTTGACGTCGCTGTTGAATT 53
consensus_8509#0      ATACAACACTCTACTTACTGCACTCTGCCGCAGTGGTGAGGTTGACGTCGCTGTTGAATT 1187
consensus_8509#1      GGAAGGAAACCAGTTGATCACACCATGCCAAAAGGGCAACAAAGTCTTGTCACTTGGGCT 1180
                             *  *   * *   ***  ****  *  **  *    * * *  *  ***   *

consensus_8509#2      GCTTCATCAACTCAAGGACAAGGGCTGCGCTCCTGTCTTGATAAGTTATAACACGGTCAT 617
consensus_8509#3      GCTTCATCAACTCAAGGACAAGGGCTGCGCTCCTGTCTTGATAAGTTATAACACGGTCAT 113
consensus_8509#0      GCTTCATCAACTCAAGGACAAGGGCTGCGCTCCTGTCTTGATAAGTTATAACACGGTCAT 1247
consensus_8509#1      ACTCCAAGATTGAGCGAAGATAAAGTTAAGCAGTGCGTCGAT---CCAAAGCTCAA-CAA 1236
                       ** **  *      * * *     *       **  * ***     * * * *   ** 

consensus_8509#2      TGATGGGCTTACGAAGGCTGGGAAGACAAAGGAAGCACTAGAGCTGCTCAATGAGATGGT 677
consensus_8509#3      TGATGGGCTTACGAAGGCTGGGAAGACAAAGGAAGCACTAGAGCTGCTCAATGAGATGGT 173
consensus_8509#0      TGATGGGCTTACGAAGGCTGGGAAGACAAAGGAAGCACTAGAGCTGCTCAATGAGATGGT 1307
consensus_8509#1      TGATTACCCTCCGAAGGCTGT---CGCAAAGCTAGCAGCAG--TTGCAGCATTGTGCGTT 1291
                      ****   * * *********      *****  ****  **   ***   **     * *

consensus_8509#2      CAGCAAAGGGC-----TCCAACCAGATATTATCACATACTCGACAATAGCTGCTGGTCTT 732
consensus_8509#3      CAGCAAAGGGC-----TCCAACCAGATATTATAACATACTCGACAATAGCTGCTGGTCTT 228
consensus_8509#0      CAGCAAAGGGC-----TCCAACCAGATATTATCACATACTCGACAATAGCTGCTGGTCTT 1362
consensus_8509#1      CAGTACGAAGCCGACTTCCGACCGAACATGACGATCGTCGTGAAGGCAATCCAGCCTCTT 1351
                      *** *    **     *** ***  * ** *  *    *  **    *        ****

consensus_8509#2      TGTAGAGAAGATAGAATTGAAGATGCAATTAGGGCATTTGGTAAAGTGCAAGATATGGGC 792
consensus_8509#3      TGTAGANAANATAGAATTGAAGATGCAATTAGGGCATTTGGTAAAGTGCAAGATATGGGC 288
consensus_8509#0      TGTAGAGAAGATAGAATTGAAGATGCAATTAGGGCATTTGGTAAAGTGCAAGATATGGGC 1422
consensus_8509#1      CTGAATACAAAACCAGCTGGGCCTGCAGAGCCACCACCTGCCTGATCAGATTGTATGGGA 1411
                         *    * *   *  **    ****       **  **    *    *   ****** 

consensus_8509#2      ATAAGGCCCAACACTGTGTTGTACAATGCGATAATTCTTGGGCTTTGCAAAAGGC---GT 849
consensus_8509#3      ATAAGGCCCAACACTGTGTTGTACAATGCGATAATTCTTGGGCTTTGCAAAAGGC---GT 345
consensus_8509#0      ATAAGGCCCAACACTGTGTTGTACAATGCGATAATTCTTGGGCTTTGCAAAAGGC---GT 1479
consensus_8509#1      GTTCTGCTCTAGGCAGACAGGGGAAAAAAAACCACAC--AAACTTTGCATGGTTTCCTGT 1469
                       *   ** * *  * *    *   **    *  *  *     *******         **

consensus_8509#2      G-AAACACACAGTGCCATTGATCTTTTCGC---TTACATGATAGGGAATGGCTGCATGCC 905
consensus_8509#3      TTAAACACACAGTGCCATTGATCTTTTCGC---TTACATGATAGGGAATGGCTGCATGCC 402
consensus_8509#0      G-AAACACACAGTGCCATTGATCTTTTCGC---TTACATGATAGGGAATGGCTGCATGCC 1535
consensus_8509#1      GTTTTCACATCAGGCAGTGTATGTTTTAAGAAGCCATGCAACTTGGAGGAGCACCAATTC 1529
                           ****    **  *  ** ****        *    *   ***   **  **   *

consensus_8509#2      GAA--TGAATC-AACTTACACCATATTGATTGAAGGCTTGGCTT-ATGAGGGATTGAT-C 960
consensus_8509#3      CGAATTGAATCCAACTTACACCATATTGATTGAAGGCTTGGCTTTATGANGGATTGATTC 462
consensus_8509#0      GAA--TGAATC-AACTTACACCATATTGATTGAAGGCTTGGCTT-ATGAGGGATTGAT-C 1590
consensus_8509#1      GGCA-TGATTT---TTTGTAAAACACTGATCCA----TTGGTACCAC-AGGGTATATTAC 1580
                           *** *     **  *  * * ****  *    ****    *  * **  *  * *

consensus_8509#2      AAGGAGGCACGGGATTTGCTGGA-TGAATTATGTTCGAGAGGTG---TTGTAAGGAAGAG 1016
consensus_8509#3      AAGGANGCACGGGATTTGCTGGAATGAATTATNTTCNAAAAGTTGTTTTTTAGGAAAGAA 522
consensus_8509#0      AAGGAGGCACGGGATTTGCTGGA-TGAATTATGTTCGAGAGGTG---TTGTAAGGAAGAG 1646
consensus_8509#1      ATATAGAGGGGGTATTTTGCTAACTGGTGTA-ATGAATTAAGTTATTCTTTGTCGTGTCA 1639
                      *   *     ** ****     * **   **  *     * **     * *         

consensus_8509#2      CTTGATAAATAAGGGAGCCATTAGACTGCTTGATTGAACT-ATGAATACATATAAGAGGA 1075
consensus_8509#3      CTTGATAAATAAGGGAACCATTAACTGCTTTGATTGAACTTATGAATACCTATAAAAGAT 582
consensus_8509#0      CTTGATAAATAAGGGAGCCATTAGACTGCTTGATTGAACT-ATGAATACATATAAGAGGA 1705
consensus_8509#1      TGGTGTAATTTTAAGGTCCTTCAAAAGCTTGCATAGAACCAAGGATTGC--ATGATGCAT 1697
                           *** *    *  ** * *      *  ** ****  * ** * *  ** *     

consensus_8509#2      TCAACTGAGT-ATCGAGGGTCTGAGAATGAGATTTTGTGCATCTTCGCTCTTCAGCAGGA 1134
consensus_8509#3      TCACTTGAATTNTCCAAGGTCTGAAAATGAAATTT-GTTCATCTTTGCTCCTCCCCCANG 641
consensus_8509#0      TCAACTGAGT-ATCGAGGGTCTGAGAATGAGATTTTGTGCATCTTCGCTCTTCAGCAGGA 1764
consensus_8509#1      TCCCAAGAAC-TTCCATGGCTGCCTCTTTTTCTTATATTTGTATAGAACTTTGGAATTAA 1756
                      **    **    ** * **        *    **   *   * *       *        

consensus_8509#2      GAGGAGATTTTACTGGATGTTCACCTAATTGATGTTGCTTTCTTGACAACATTCTTGCCG 1194
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      GAGGAGATTTTACTGGATGTTCACCTAATTGATGTTGCTTTCTTGACAACATGTGAGTCC 1824
consensus_8509#1      TAGTAGTTTTTCTTCTTCTTTTTTTCTGTTGGAACTACAAAGCTGGGGCTAAA-ATCCTG 1815
                                                                                  

consensus_8509#2      TGCTCAAATGCTAATGGAGGTCCTTTTCTCAGATTGCCACCAGAAGGCCCAGCTGGTTTT 1254
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      TTTC---------------ATCCACTTCCCACCTTACAGGCTTACAGCCCA-----CTTC 1864
consensus_8509#1      TTCCTGAATTCAGGTTTTGGCCAGGATGGAGATTAAATGGTGCACATTGCATAGATGTAC 1875
                                                                                  

consensus_8509#2      GTATTCAGAAGAGGCTGGATTGCCTTCACGACGATCGTCATGTTCGGTCGGAAGTCGGCT 1314
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      AGTCTTCGAGTTGCTTGGAATTTCTGCATAACTCTTGTCTTATTTAA-CATACTTTACCT 1923
consensus_8509#1      A----------------------------------------------------------- 1876
                                                                                  

consensus_8509#2      TCGTACTGAACGCACAATGCTGCAACTGCTGCTAGCTGAAAAAAAATCTTGAAAGAAAAA 1374
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      TATTGTTGAACATGGTCTCATGTTTCACATTCTTGTCCTTACATGATATATCATACTAGT 1983
consensus_8509#1      ------------------------------------------------------------
                                                                                  

consensus_8509#2      ACAATGGCACTCACTGCTGCTTTCTGAATTTTGTCAGATTTGCTACAGTATAGCT-ACCT 1433
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      GTGA-GATACATATTAGACCTGTTTTGATTGGGCATTTCTTGCTTCAATATGCTTTAGCA 2042
consensus_8509#1      ------------------------------------------------------------
                                                                                  

consensus_8509#2      TTGCGACAGCCTTCGGAGGGTAATCATTGTTGAGCTTTGGATCGACGCACTGCTTAACTT 1493
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      CTTCATATGAACTAGCGGAATGAAGGGATATG---------------------------- 2074
consensus_8509#1      ------------------------------------------------------------
                                                                                  

consensus_8509#2      TATCTTCGCTCAATCTTGGAGTAGCCTGCCTCACAAAGATCATGGTATATGTAAGATCAT 1553
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      ------------------------------------------------------------
consensus_8509#1      ------------------------------------------------------------
                                                                                  

consensus_8509#2      TGGAAATGGAAAGATTGAAATAGGATATATTGTAATAAGTTATCTTTTGTTGAAGGATAA 1613
consensus_8509#3      ------------------------------------------------------------
consensus_8509#0      ------------------------------------------------------------
consensus_8509#1      ------------------------------------------------------------
                                                                                  

consensus_8509#2      AACTT 1618
consensus_8509#3      -----
consensus_8509#0      -----
consensus_8509#1      -----