cluster # 8534

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Oryza sativa
cluster # 8534 cluster # 8534 Sequences # 5 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8534#0 length = 810 sequences # 1
consensus_8534#1 length = 802 sequences # 2

consensus_8534#2 length = 675 sequences # 1
consensus_8534#3 length = 487 sequences # 1

consensusID : consensus_8534#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 810
fasta sequence

                              [TTTAAAAAAATCTCTTTAGCCATGAAGGAATCTCTTACATGTAGACCCTACTCTTCTCTGGGCCCACTCATATGGCCGTAAAAATGGTTTTTCCCAGCATGATACTAATGTTACAGCAGCTTACAACAAAGAAGGCAGGAGCGTAACAGCTACAGCTAGTTCTAGTTGCCCCTTCAAACCTTCAGGAAGTATATGTGGCCTTCAAACAAAAAAGAAGGCTCAGGACTCAGAAGTATATGGAGAGCGTGCCGTCGATCCTGTCTTGCAGCTTGCCGCACTGCTCCAGTAGCCTCGCAAGCTTGTCGTCCCTCTCAATGGACACCAATTCTCTAAGCTCCGGCCTTCTCGGCATCCGCACGCCATCACCAGCTCCAAGCACACCGTTCACCCCACCGGTGGTATCCGCCGGTGGTTGAGGTTCATAGTGAACCTGGGTGGGCGGTTGGGGTGGCAACGGTTTCGCCGGTGGCGGGGCGCTGACGGCATCGAGATCGCAGCTGATCTCGATGATCTCATCTAGGGAGAGGCGGGACGACACGGAAGGCGCCATGCCGCGATCCTCCAGAATGGGTGCCGCCTCATCCGTGGTGTTGCTGCTGGCAGAGAGATCATGCTGGGTTCCTCCATTTGGAAGTGAATCAGCTGCCGGTGTCTGATAAAGATGCTGACTCAGGACATAAGCTTCTGAAAACTCTCCTGTGGAAAGCTTGGCTAGTCTCCAGTTGAAAATTCGGCGGAAGATAGTAACCCATCTTGGCACAAGGTGGTACTGCGAGCCACGGAGCTCGAGGCCGACACCTTTCTGCACCA]

[+] EMBL CB628486             [TTTAAAAAAATCTCTTTAGCCATGAAGGAATCTCTTACATGTAGACCCTACTCTTCTCTGGGCCCACTCATATGGCCGTAAAAATGGTTTTTCCCAGCATGATACTAATGTTACAGCAGCTTACAACAAAGAAGGCAGGAGCGTAACAGCTACAGCTAGTTCTAGTTGCCCCTTCAAACCTTCAGGAAGTATATGTGGCCTTCAAACAAAAAAGAAGGCTCAGGACTCAGAAGTATATGGAGAGCGTGCCGTCGATCCTGTCTTGCAGCTTGCCGCACTGCTCCAGTAGCCTCGCAAGCTTGTCGTCCCTCTCAATGGACACCAATTCTCTAAGCTCCGGCCTTCTCGGCATCCGCACGCCATCACCAGCTCCAAGCACACCGTTCACCCCACCGGTGGTATCCGCCGGTGGTTGAGGTTCATAGTGAACCTGGGTGGGCGGTTGGGGTGGCAACGGTTTCGCCGGTGGCGGGGCGCTGACGGCATCGAGATCGCAGCTGATCTCGATGATCTCATCTAGGGAGAGGCGGGACGACACGGAAGGCGCCATGCCGCGATCCTCCAGAATGGGTGCCGCCTCATCCGTGGTGTTGCTGCTGGCAGAGAGATCATGCTGGGTTCCTCCATTTGGAAGTGAATCAGCTGCCGGTGTCTGATAAAGATGCTGACTCAGGACATAAGCTTCTGAAAACTCTCCTGTGGAAAGCTTGGCTAGTCTCCAGTTGAAAATTCGGCGGAAGATAGTAACCCATCTTGGCACAAGGTGGTACTGCGAGCCACGGAGCTCGAGGCCGACACCTTTCTGCACCA]




>consensus_8534#0
TTTAAAAAAATCTCTTTAGCCATGAAGGAATCTCTTACATGTAGACCCTACTCTTCTCTG
GGCCCACTCATATGGCCGTAAAAATGGTTTTTCCCAGCATGATACTAATGTTACAGCAGC
TTACAACAAAGAAGGCAGGAGCGTAACAGCTACAGCTAGTTCTAGTTGCCCCTTCAAACC
TTCAGGAAGTATATGTGGCCTTCAAACAAAAAAGAAGGCTCAGGACTCAGAAGTATATGG
AGAGCGTGCCGTCGATCCTGTCTTGCAGCTTGCCGCACTGCTCCAGTAGCCTCGCAAGCT
TGTCGTCCCTCTCAATGGACACCAATTCTCTAAGCTCCGGCCTTCTCGGCATCCGCACGC
CATCACCAGCTCCAAGCACACCGTTCACCCCACCGGTGGTATCCGCCGGTGGTTGAGGTT
CATAGTGAACCTGGGTGGGCGGTTGGGGTGGCAACGGTTTCGCCGGTGGCGGGGCGCTGA
CGGCATCGAGATCGCAGCTGATCTCGATGATCTCATCTAGGGAGAGGCGGGACGACACGG
AAGGCGCCATGCCGCGATCCTCCAGAATGGGTGCCGCCTCATCCGTGGTGTTGCTGCTGG
CAGAGAGATCATGCTGGGTTCCTCCATTTGGAAGTGAATCAGCTGCCGGTGTCTGATAAA
GATGCTGACTCAGGACATAAGCTTCTGAAAACTCTCCTGTGGAAAGCTTGGCTAGTCTCC
AGTTGAAAATTCGGCGGAAGATAGTAACCCATCTTGGCACAAGGTGGTACTGCGAGCCAC
GGAGCTCGAGGCCGACACCTTTCTGCACCA

consensusID : consensus_8534#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 802
fasta sequence

                              [TCACGCCAAATTAAAAAAAAAATTCTCTTTAGTACGGTTGGAATCTCTTACATGTAGACCCTACTCTACTCTGGGCCCACTCATATGGCCGTAAAAATGGTTTTTCACAGCATGATACTAATGTTACAGCAGCTTACAACAAAGAAGGCAGGAGCGTAACAGCTACAGCTAGTTCTAGTTGCCCCTTCAAACCTTTAGGAAGTATATGTGGCCTTCAAACAAAAAAGAAGGCTCATGACTCAGAAGTATATGGAGAGCGTGCCGTCGATCCTGTCTTGCAGCTTGCTGCACTGCTCCAGTAGCCTCGCAAGCTTGTCATCCCTCTCAATGGGCACCAAATCTCTAAGCTCCGTCCTTCTCGGCATCCGCACGCCATCACCAGCTCCAAGCACACCGTTCACCCCACCCGGTGGTTGAGGTTCATAGCGAACCTGGGTGGGCGGTTGGGGTGGCAACGGTTTCGCCGGTGGCAGGGCGCTGACGGCATCGAGATCGCAGCTGATCTCGATGATCTCATCTAGGGAGAGGCGGGACGACACGGAAGGCGCCATGCCGCGATCCTCCAGAATGGGTGCCGCCTCATCCGTGGTGTTGCTGCTGGCAGAGAGATCATGCTGGGTTCCTCCATTTGGAAGTGAATCAGCTGCCGGTGTCTGATAAAGATGCTGACTCAGGACATAAGCTTCTGAAAACTCTCCTGTGGAAAGCTTGGCTAGTCTCCAGTTGAAAATTCGGCGGAAGATAGTAACCCATCTTGGCACAAGGTGGTACTGCGAGCCACGGAGCTCGAGGCCGACACCTT]

[-] EMBL AK059345             [TCACGCCAAATTAAAAAAAAAATTCTCTTTAGTACGGTTGGAATCTCTTACATGTAGACCCTACTCTACTCTGGGCCCACTCATATGGCCGTAAAAATGGTTTTTCACAGCATGATACTAATGTTACAGCAGCTTACAACAAAGAAGGCAGGAGCGTAACAGCTACAGCTAGTTCTAGTTGCCCCTTCAAACCTTTAGGAAGTATATGTGGCCTTCAAACAAAAAAGAAGGCTCATGACTCAGAAGTATATGGAGAGCGTGCCGTCGATCCTGTCTTGCAGCTTGCTGCACTGCTCCAGTAGCCTCGCAAGCTTGTCATCCCTCTCAATGGGCACCAAATCTCTAAGCTCCGTCCTTCTCGGCATCCGCACGCCATCACCAGCTCCAAGCACACCGTTCACCCCACCCGGTGGTTGAGGTTCATAGCGAACCTGGGTGGGCGGTTGGGGTGGCAACGGTTTCGCCGGTGGCAGGGCGCTGACGGCATCGAGATCGCAGCTGATCTCGATGATCTCATCTAGGGAGAGGCGGGACGACACGGAAGGCGCCATGCCGCGATCCTCCAGAATGGGTGCCGCCTCATCCGTGGTGTTGCTGCTGGCAGAGAGATCATGCTGGGTTCCTCCATTTGGAAGTGAATCAGCTGCCGGTGTCTGATAAAGATGCTGACTCAGGACATAAGCTTCTGAAAACTCTCCTGTGGAAAGCTTGGCTAGTCTCCAGTTGAAAATTCGGCGGAAGATAGTAACCCATCTTGGCACAAGGTGGTACTGCGAGCCACGGAGCTCGAGGCCGA      ]
[+] EMBL CB658977             [                       TCTCTTTAGTACGGTTGGCATTTCTTACATGTAGACCCTACTCTACTCTGGGCCCACTCATATGGCCGTAAAAATGGTTTTTCACAGCATGATACTAATGTTACAGCAGCTTACAACAAAGAAGGCAGGAGCGTAACAGCTACAGCTAGTTCTAGTTGCCCCTTCAAACCTTCAGGAAGTATATGTGGCCTTCAAACAAAAAAGAAGGCTCATGACTCAAAAGTATATGGAGAGCGTGCCGTCGATCCTGTCTTGCAGCTTGCTGCACTGCTCCAGTAGCCTCGCAAGCTTGTCATCCCTCTCAATGGGCACCAAATCTCTAAGCTCCGTCCTTCTCGGCATCCGCACGCCATCACCAGCTCCAAGCACACCGTTCACCCCACCCGGTGGTTGAGGTTCATAGCGAACCTGGGTGGGCGGTTGGGGTGGCAACGGTTTCGCCGGTGGCAGGGCGCTGACGGCATCGAGATCGCAGCTGATCTCGATGATCTCATCTAGGGAGAGGCGGGACGACACGGAAGGCGCCATGCCGCGATCCTCCAGAATGGGTGCCGCCTCATCCGTGGTGTTGCTGCTGGCAGAGAGATCATGCTGGGTTCCTCCATTTGGAAGTGAATCAGCTGCCGGTGTCTGATAAAGATGCTGACTCAGGACATAAGCTTCTGAAAACTCTCCTGTGGAAAGCTTGGCTAGTCTCCAGTTGAAAATTCGGCGGAAGATAGTAACCCATCTTGGCACAAGGTGGTACTGCGAGCCACGGAGCTCGAGGCCGACACCTT]




>consensus_8534#1
TCACGCCAAATTAAAAAAAAAATTCTCTTTAGTACGGTTGGAATCTCTTACATGTAGACC
CTACTCTACTCTGGGCCCACTCATATGGCCGTAAAAATGGTTTTTCACAGCATGATACTA
ATGTTACAGCAGCTTACAACAAAGAAGGCAGGAGCGTAACAGCTACAGCTAGTTCTAGTT
GCCCCTTCAAACCTTTAGGAAGTATATGTGGCCTTCAAACAAAAAAGAAGGCTCATGACT
CAGAAGTATATGGAGAGCGTGCCGTCGATCCTGTCTTGCAGCTTGCTGCACTGCTCCAGT
AGCCTCGCAAGCTTGTCATCCCTCTCAATGGGCACCAAATCTCTAAGCTCCGTCCTTCTC
GGCATCCGCACGCCATCACCAGCTCCAAGCACACCGTTCACCCCACCCGGTGGTTGAGGT
TCATAGCGAACCTGGGTGGGCGGTTGGGGTGGCAACGGTTTCGCCGGTGGCAGGGCGCTG
ACGGCATCGAGATCGCAGCTGATCTCGATGATCTCATCTAGGGAGAGGCGGGACGACACG
GAAGGCGCCATGCCGCGATCCTCCAGAATGGGTGCCGCCTCATCCGTGGTGTTGCTGCTG
GCAGAGAGATCATGCTGGGTTCCTCCATTTGGAAGTGAATCAGCTGCCGGTGTCTGATAA
AGATGCTGACTCAGGACATAAGCTTCTGAAAACTCTCCTGTGGAAAGCTTGGCTAGTCTC
CAGTTGAAAATTCGGCGGAAGATAGTAACCCATCTTGGCACAAGGTGGTACTGCGAGCCA
CGGAGCTCGAGGCCGACACCTT

consensusID : consensus_8534#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 675
fasta sequence

                              [ATTCTCTTTAGTACGGTTGGAATCTCTTACATGTAAACCCTACTCTACTCTGGGCCCACTCATATGGCCGTAAAAATGGTTTTTCACAGCATGATACTAATGTTACAGCAGCTTACAACAAAGAAGGCAGGAGCGTAACAGCTACAGCTAGTTCTAGTTGCCCCTTCAAACCTTCAGGAAGTATATGTGGCCTTCAAACAAAAAAGAAGGCTCATGACTCAGAAGTATATGGAGAGCGTGCCGTCGATCCTGTCTTGCAGCTTGCTGCACTGCTCCAGTTAGCCTCCGCAAGCTTGTCATCCCTCTCAATGGGCACCAAATCTCTAAGCTCCCGTCCTTCTCGGCATCCGCACGCCCATCACCAGCTCCCAGCACACCGTTCACCCCACCCGGTGGTTGAAGTTCAATAACAAACCTGGTTGGCGGTTNGGGTTGGCAACGGTTCCCCCGGTGGCANGGCGCTGAACGCCTCAAAATTCCCACTNATTNCAAAATTTCNTCTAGGAAAAGGNGGANAANCGGAAGNNCCTCCCNATCCCCCAAATGGTTCCCCCNCCTTGTNTTTCNCGGNAAAAANAAGCNGGTCCCCATTGGAATAACACGCGGTTTTNAAAANCAACCGANACTCNAANNCCTNGAAACNGNNTCCCCTTNAATCCGGAAAAAATACCCCCT]

[+] EMBL BE229246             [ATTCTCTTTAGTACGGTTGGAATCTCTTACATGTAAACCCTACTCTACTCTGGGCCCACTCATATGGCCGTAAAAATGGTTTTTCACAGCATGATACTAATGTTACAGCAGCTTACAACAAAGAAGGCAGGAGCGTAACAGCTACAGCTAGTTCTAGTTGCCCCTTCAAACCTTCAGGAAGTATATGTGGCCTTCAAACAAAAAAGAAGGCTCATGACTCAGAAGTATATGGAGAGCGTGCCGTCGATCCTGTCTTGCAGCTTGCTGCACTGCTCCAGTTAGCCTCCGCAAGCTTGTCATCCCTCTCAATGGGCACCAAATCTCTAAGCTCCCGTCCTTCTCGGCATCCGCACGCCCATCACCAGCTCCCAGCACACCGTTCACCCCACCCGGTGGTTGAAGTTCAATAACAAACCTGGTTGGCGGTTNGGGTTGGCAACGGTTCCCCCGGTGGCANGGCGCTGAACGCCTCAAAATTCCCACTNATTNCAAAATTTCNTCTAGGAAAAGGNGGANAANCGGAAGNNCCTCCCNATCCCCCAAATGGTTCCCCCNCCTTGTNTTTCNCGGNAAAAANAAGCNGGTCCCCATTGGAATAACACGCGGTTTTNAAAANCAACCGANACTCNAANNCCTNGAAACNGNNTCCCCTTNAATCCGGAAAAAATACCCCCT]




>consensus_8534#2
ATTCTCTTTAGTACGGTTGGAATCTCTTACATGTAAACCCTACTCTACTCTGGGCCCACT
CATATGGCCGTAAAAATGGTTTTTCACAGCATGATACTAATGTTACAGCAGCTTACAACA
AAGAAGGCAGGAGCGTAACAGCTACAGCTAGTTCTAGTTGCCCCTTCAAACCTTCAGGAA
GTATATGTGGCCTTCAAACAAAAAAGAAGGCTCATGACTCAGAAGTATATGGAGAGCGTG
CCGTCGATCCTGTCTTGCAGCTTGCTGCACTGCTCCAGTTAGCCTCCGCAAGCTTGTCAT
CCCTCTCAATGGGCACCAAATCTCTAAGCTCCCGTCCTTCTCGGCATCCGCACGCCCATC
ACCAGCTCCCAGCACACCGTTCACCCCACCCGGTGGTTGAAGTTCAATAACAAACCTGGT
TGGCGGTTNGGGTTGGCAACGGTTCCCCCGGTGGCANGGCGCTGAACGCCTCAAAATTCC
CACTNATTNCAAAATTTCNTCTAGGAAAAGGNGGANAANCGGAAGNNCCTCCCNATCCCC
CAAATGGTTCCCCCNCCTTGTNTTTCNCGGNAAAAANAAGCNGGTCCCCATTGGAATAAC
ACGCGGTTTTNAAAANCAACCGANACTCNAANNCCTNGAAACNGNNTCCCCTTNAATCCG
GAAAAAATACCCCCT

consensusID : consensus_8534#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 487
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGGGATTACGCCAAATTTTTAAAAAAATCTCTTTAGTACGGTTGGAATCTCTTACATGTANACCCTACTCTTCTCTGGGCCCACTCATATGGCCGTAAAAATGGTTTTTCACAGCATGATACTAATGTTACAGCAGCTTACAACAAAGAAGGNAGGAGCGTAACAGCTACAGCTAGTTCTAGTTGCCCCTTCAAACCTTCAGGAAGTATATGTGGCCTTCAAACAAAAAAGAAGGCTCAGGACTCACAAGTATATGGAGAGCGTGCCGTCGATCCTGTCTTGCAGCTTGCCGCACTGCTCCANTANCCTCGCAAGCTTTGTCGTCCCTCTCAATGGANACCAATTCTCTAAGCTCCGGGCTTCTCGGNATCCGCACCCCATCANCAGCTCCANCACACGNTCACCCACCGGTGGTATCNCCNGTGGTGAAGTCAAATGAACTGGTNGNGGTGGG]

[-] EMBL AA753737             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGGGATTACGCCAAATTTTTAAAAAAATCTCTTTAGTACGGTTGGAATCTCTTACATGTANACCCTACTCTTCTCTGGGCCCACTCATATGGCCGTAAAAATGGTTTTTCACAGCATGATACTAATGTTACAGCAGCTTACAACAAAGAAGGNAGGAGCGTAACAGCTACAGCTAGTTCTAGTTGCCCCTTCAAACCTTCAGGAAGTATATGTGGCCTTCAAACAAAAAAGAAGGCTCAGGACTCACAAGTATATGGAGAGCGTGCCGTCGATCCTGTCTTGCAGCTTGCCGCACTGCTCCANTANCCTCGCAAGCTTTGTCGTCCCTCTCAATGGANACCAATTCTCTAAGCTCCGGGCTTCTCGGNATCCGCACCCCATCANCAGCTCCANCACACGNTCACCCACCGGTGGTATCNCCNGTGGTGAAGTCAAATGAACTGGTNGNGGTGGG]




>consensus_8534#3
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGGGATTACGCCAAATTTTTAAAAAAA
TCTCTTTAGTACGGTTGGAATCTCTTACATGTANACCCTACTCTTCTCTGGGCCCACTCA
TATGGCCGTAAAAATGGTTTTTCACAGCATGATACTAATGTTACAGCAGCTTACAACAAA
GAAGGNAGGAGCGTAACAGCTACAGCTAGTTCTAGTTGCCCCTTCAAACCTTCAGGAAGT
ATATGTGGCCTTCAAACAAAAAAGAAGGCTCAGGACTCACAAGTATATGGAGAGCGTGCC
GTCGATCCTGTCTTGCAGCTTGCCGCACTGCTCCANTANCCTCGCAAGCTTTGTCGTCCC
TCTCAATGGANACCAATTCTCTAAGCTCCGGGCTTCTCGGNATCCGCACCCCATCANCAG
CTCCANCACACGNTCACCCACCGGTGGTATCNCCNGTGGTGAAGTCAAATGAACTGGTNG
NGGTGGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8534#0      ------------------------------------------------TTTAAAAAAA-- 10
consensus_8534#1      --------------------------------------TCACGCCAAATTAAAAAAAAAA 22
consensus_8534#2      -----------------------------------------------------------A 1
consensus_8534#3      TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGGGATTACGCCAAATTTTTAAAAAAA 60
                                                                                  

consensus_8534#0      -TCTCTTTAGCCATGAAGGAATCTCTTACATGTAGACCCTACTCTTCTCTGGGCCCACTC 69
consensus_8534#1      TTCTCTTTAGTACGGTTGGAATCTCTTACATGTAGACCCTACTCTACTCTGGGCCCACTC 82
consensus_8534#2      TTCTCTTTAGTACGGTTGGAATCTCTTACATGTAAACCCTACTCTACTCTGGGCCCACTC 61
consensus_8534#3      -TCTCTTTAGTACGGTTGGAATCTCTTACATGTANACCCTACTCTTCTCTGGGCCCACTC 119
                       *********    *  ***************** ********** **************

consensus_8534#0      ATATGGCCGTAAAAATGGTTTTTCCCAGCATGATACTAATGTTACAGCAGCTTACAACAA 129
consensus_8534#1      ATATGGCCGTAAAAATGGTTTTTCACAGCATGATACTAATGTTACAGCAGCTTACAACAA 142
consensus_8534#2      ATATGGCCGTAAAAATGGTTTTTCACAGCATGATACTAATGTTACAGCAGCTTACAACAA 121
consensus_8534#3      ATATGGCCGTAAAAATGGTTTTTCACAGCATGATACTAATGTTACAGCAGCTTACAACAA 179
                      ************************ ***********************************

consensus_8534#0      AGAAGGCAGGAGCGTAACAGCTACAGCTAGTTCTAGTTGCCCCTTCAAACCTTCAGGAAG 189
consensus_8534#1      AGAAGGCAGGAGCGTAACAGCTACAGCTAGTTCTAGTTGCCCCTTCAAACCTTTAGGAAG 202
consensus_8534#2      AGAAGGCAGGAGCGTAACAGCTACAGCTAGTTCTAGTTGCCCCTTCAAACCTTCAGGAAG 181
consensus_8534#3      AGAAGGNAGGAGCGTAACAGCTACAGCTAGTTCTAGTTGCCCCTTCAAACCTTCAGGAAG 239
                      ****** ********************************************** ******

consensus_8534#0      TATATGTGGCCTTCAAACAAAAAAGAAGGCTCAGGACTCAGAAGTATATGGAGAGCGTGC 249
consensus_8534#1      TATATGTGGCCTTCAAACAAAAAAGAAGGCTCATGACTCAGAAGTATATGGAGAGCGTGC 262
consensus_8534#2      TATATGTGGCCTTCAAACAAAAAAGAAGGCTCATGACTCAGAAGTATATGGAGAGCGTGC 241
consensus_8534#3      TATATGTGGCCTTCAAACAAAAAAGAAGGCTCAGGACTCACAAGTATATGGAGAGCGTGC 299
                      ********************************* ****** *******************

consensus_8534#0      CGTCGATCCTGTCTTGCAGCTTGCCGCACTGCTCCAGT-AGCCTC-GCAAGCTT-GTCGT 306
consensus_8534#1      CGTCGATCCTGTCTTGCAGCTTGCTGCACTGCTCCAGT-AGCCTC-GCAAGCTT-GTCAT 319
consensus_8534#2      CGTCGATCCTGTCTTGCAGCTTGCTGCACTGCTCCAGTTAGCCTCCGCAAGCTT-GTCAT 300
consensus_8534#3      CGTCGATCCTGTCTTGCAGCTTGCCGCACTGCTCCANT-ANCCTC-GCAAGCTTTGTCGT 357
                      ************************ *********** * * **** ******** *** *

consensus_8534#0      CCCTCTCAATGGACACCAATTCTCTAAGCTCC-GGCCTTCTCGGCATCCGCACGCC-ATC 364
consensus_8534#1      CCCTCTCAATGGGCACCAAATCTCTAAGCTCC-GTCCTTCTCGGCATCCGCACGCC-ATC 377
consensus_8534#2      CCCTCTCAATGGGCACCAAATCTCTAAGCTCCCGTCCTTCTCGGCATCCGCACGCCCATC 360
consensus_8534#3      CCCTCTCAATGGANACCAATTCTCTAAGCTCC-GGGCTTCTCGGNATCCGCACCCC-ATC 415
                      ************  ***** ************ *  ******** ******** ** ***

consensus_8534#0      ACCAGCTCCAAGCACACCGTTCACCCCACCGGTGGTATCCGCCGGTGGTTGAGGTTCA-T 423
consensus_8534#1      ACCAGCTCCAAGCACACCGTTCACCCCAC------------CCGGTGGTTGAGGTTCA-T 424
consensus_8534#2      ACCAGCTCCCAGCACACCGTTCACCCCAC------------CCGGTGGTTGAAGTTCAAT 408
consensus_8534#3      ANCAGCTCC-ANCACAC-GNTCACCCA--------------CCGGTGGT--ATCNCCNGT 457
                      * ******* * ***** * ******               ********  *    *  *

consensus_8534#0      AGTGAACCTGGGTGG-GCGGTTGGGGTGGCAACGGTTTCGCCGGTGGCGGGGCGCTGACG 482
consensus_8534#1      AGCGAACCTGGGTGG-GCGGTTGGGGTGGCAACGGTTTCGCCGGTGGCAGGGCGCTGACG 483
consensus_8534#2      AACAAACCTGGTTGG-CGGTTNGGGTTGGCAACGGTTCCCCCGGTGGCANGGCGCTGAAC 467
consensus_8534#3      GGTGAAGTCAAATGAACTGGTNGNGGTGGG------------------------------ 487
                          **      **    * * * * ***                               

consensus_8534#0      GCATCGAGATCGCAGCTGATCTCGATGATCTCATCTAGGGAGAGGCGGGACGACACGGAA 542
consensus_8534#1      GCATCGAGATCGCAGCTGATCTCGATGATCTCATCTAGGGAGAGGCGGGACGACACGGAA 543
consensus_8534#2      GCCTCAAAATTCCCACTNATTNCAA-AATTTCNTCTAGGAAAAGGNGGAN--AANCGGAA 524
consensus_8534#3      ------------------------------------------------------------
                                                                                  

consensus_8534#0      GGCGCCATGCCGCGATCCTCCAGAATGGGTGCCGCCTCATCCGTGGTGTTGCTGCTGGCA 602
consensus_8534#1      GGCGCCATGCCGCGATCCTCCAGAATGGGTGCCGCCTCATCCGTGGTGTTGCTGCTGGCA 603
consensus_8534#2      GNNCCT----CCCNATCCCCCA-AATGGTTCCCCCNCC----------TTGTNTTTCNCG 569
consensus_8534#3      ------------------------------------------------------------
                                                                                  

consensus_8534#0      GAGAGATCATGCTGGGTTCCTCCATTTGGAAGTGAATCAGCTGCCGGTGTCTGATAAAGA 662
consensus_8534#1      GAGAGATCATGCTGGGTTCCTCCATTTGGAAGTGAATCAGCTGCCGGTGTCTGATAAAGA 663
consensus_8534#2      GNAAAAANAAGCNGG---TCCCCATTGGAATAACACGCGGTTTTNAAAANCAACCGANAC 626
consensus_8534#3      ------------------------------------------------------------
                                                                                  

consensus_8534#0      TGCTGACTCAGGACATAAGCTTCTGAAAACTCTCCTGTGGAAAGCTTGGCTAGTCTCCAG 722
consensus_8534#1      TGCTGACTCAGGACATAAGCTTCTGAAAACTCTCCTGTGGAAAGCTTGGCTAGTCTCCAG 723
consensus_8534#2      TCNAANNCCTNGAAACNGNNTCCC-----CTTNAATCCGGAAAAAATACCCCCT------ 675
consensus_8534#3      ------------------------------------------------------------
                                                                                  

consensus_8534#0      TTGAAAATTCGGCGGAAGATAGTAACCCATCTTGGCACAAGGTGGTACTGCGAGCCACGG 782
consensus_8534#1      TTGAAAATTCGGCGGAAGATAGTAACCCATCTTGGCACAAGGTGGTACTGCGAGCCACGG 783
consensus_8534#2      ------------------------------------------------------------
consensus_8534#3      ------------------------------------------------------------
                                                                                  

consensus_8534#0      AGCTCGAGGCCGACACCTTTCTGCACCA 810
consensus_8534#1      AGCTCGAGGCCGACACCTT--------- 802
consensus_8534#2      ----------------------------
consensus_8534#3      ----------------------------