cluster # 8577

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Oryza sativa
cluster # 8577 cluster # 8577 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8577#0 length = 1420 sequences # 5
consensusID : consensus_8577#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1420
fasta sequence
                              [CCTTCCCCACCCCCCCCCATTTACTCGATCATCACAACGTGCCAATCAATTAATCGATCGATCAGTTTTGTGCGTACGTTAGCNTGTGGAGAGGGAGAGAAATGGACATGGAAATCGTGGTTTTTCTGAGGTAATGTGCTGGAGGAGGAAGAAGAAGAAGAAGAAGAAGCAGCNATTGTTGC-AGCT-GC-AGCTTTCTGGGATTCCGAGGAGGCGATAAGCTTCGCAACAGATCGAGGAGATCAGTCGGTGCCAAGCAAGGAGGCGTCACCGCCATGGCGCAGCCTG-AGCCGCCGCCGCCGTCATCGCAATCTTCGTCGTCGTCTTCCTCCTCTTCTCCCGTGTTCCCTTCCCCGAGGCCGTTCATGGCGCTCCCGCACCCGCCGCAGGCTGGGTTCTTGGACGGCGCCGCCGAGGGGCCCTCGTCGTCGATGAGCCCCACCTCCATTCTTGAGACCAAGCAGTTCTGCTGCTCGTCCGCCATGCCGCCGTTCCTGTCGGAGAGGAGCCTCAGGAAGGCCCACGTGGAGATGGCCGCCGCACCGCCGGAGCCGGCCGGCGTCGGCCTCGCCGACGTGCTCCGGGAGCACCACGGGGGCGGCAAGGCCGGCGGCGGCAAGGTGGTGTTCGGGTCGCAGCTCAGAATCCAGGTGCCCACGGGGAGGGCCGTCGAGCTGGTGTCCTCCCCGATCGAGTTCGGCGTCAAGAACCGGGACGCCCACTTGGCGGCGATGTCGCCGGCGAGGAGGTTCCTGCCGGAGGTGGTCAGCTCGCCGTCCGCGCGGGTGTTCG-CCG-CCGCCGTGGTGTCGCCCGGGGAGATGGCCATGTCGGAGGACTACACCTGCGTCATCTCCCGCGGCCCCAACCCGAGGACCACCCACATCTTCGACGACTGCATCGTCGAGAGCTGCGGCGATGTGCTCGTGGAGAAGGTGGCCGGCGGCGGCGGCGACGGCGACGGCGACGCGGTGCGAACCAATGGGTT-CCT-GAA-CT-CTTGCTA-CGCATGCAA-CAAGCAGCTTGGA-CATGGCAATGACATCTTCATCTACCGAGGTGATAAAGCATTCTGCAGCAGTGAGTGCCGGTACCAGGAGATGCTTTTCGACGAGGCGGTGGACAATTTGCGCTAGGCTGTTGAACGAAATGGTCGTTCCACATGAGTATTTCTATGGAGGAGGAAGAAGA-CAATAGTCCTAAATAACTGAGATGAGATTTGTTTTCTTTCTTTTTTTGTTTTTGTTTTCTCCACTTTTGCGAGATTGGATGCTGTTTTTGGCCATGGAGAAGGGGGAATGATTTATTAGTCTTTTTTGCGGATTAAAGACCTTTGCCCACTTTTGTAAGATGTTGATTATTGATTGCTTGGGGCATCATGTTTTTGTGACTTTCGAGTTAGTTGCAATCTGATGCTTTGCTCTAAAAAAAA]

[+] EMBL C72329               [CCTTCCCCACCCCCCCCCATTTACTCGATCATCACAACGTGCCAATCAATTAATCGATCGATCAGTTTTGTGCGTACGTTAGCNTGTGGAGAGGGAGAGAAATGGACATGGAAATCGTGGTTTTTCTGAGGTAATGTGCTGGAGGAGGAAGAAGAAGAAGAAGAAGAAGCAGCNATTGTTGCNAGCTAGCNAGCTTTCTGGGATTCCGAGGAGGCGATAAGCTTCGCAACAGATCGAGGAGATCAGTCGGTGCCAAGCAAGGAGGNGTaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK066202             [                                                                                                                 ATCGTGGTTTTTCTGAGGTAATGTGCTGGAGGAGGAAGAAGAAGAAGAAGAAGAAGCAGCTATTGTTGC TGCT GC TGCTTTCTGGGATTCCGAGGAGGCGATATGCTTCGCAACAGATCGAGGAGATCAGTCGGTGCCAAGCAAGGAGGCGTCACCGCCATGGCGCAGCCTG AGCCGCCGCCGCCGTCATCGCAATCTTCGTCGTCGTCTTCCTCCTCTTCTCCCGTGTTCCCTTCCCCGAGGCCGTTCATGGCGCTCCCGCACCCGCCGCAGGCTGGGTTCTTGGACGGCGCCGCCGAGGGGCCCTCGTCGTCGATGAGCCCCACCTCCATTCTTGAGACCAAGCAGTTCTGCTGCTCGTCCGCCATGCCGCCGTTCCTGTCGGAGAGGAGCCTCAGGAAGGCCCACGTGGAGATGGCCGCCGCACCGCCGGAGCCGGCCGGCGTCGGCCTCGCCGACGTGCTCCGGGAGCACCACGGGGGCGGCAAGGCCGGCGGCGGCAAGGTGGTGTTCGGGTCGCAGCTCAGAATCCAGGTGCCCACGGGGAGGGCCGTCGAGCTGGTGTCCTCCCCGATCGAGTTCGGCGTCAAGAACCGGGACGCCCACTTGGCGGCGATGTCGCCGGCGAGGAGGTTCCTGCCGGAGGTGGTCAGCTCGCCGTCCGCGCGGGTGTTCG CCG CCGCCGTGGTGTCGCCCGGGGAGATGGCCATGTCGGAGGACTACACCTGCGTCATCTCCCGCGGCCCCAACCCGAGGACCACCCACATCTTCGACGACTGCATCGTCGAGAGCTGCGGCGATGTGCTCGTGGAGAAGGTGGCCGGCGGCGGCGGCGACGGCGACGGCGACGCGGTGCGAACCAATGGGTT CCT GAA CT CTTGCTA CGCATGCAA CAAGCAGCTTGGA CATGGCAATGACATCTTCATCTACCGAGGTGATAAAGCATTCTGCAGCAGTGAGTGCCGGTACCAGGAGATGCTTTTCGACGAGGCGGTGGACAATTTGCGCTAGGCTGTTGAACGAAATGGTCGTTCCACATGAGTATTTCTATGGAGGAGGAAGAAGA CAATAGTCCTAAATAACTGAGATGAGATTTGTTTTCTTTCTTTTTTTGTTTTTGTTTTCTCCACTTTTGCGAGATTGGATGCTGTTTTTGGCCATGGAGAAGGGGGAATGATTTATTAGTCTTTTTTGCGGATTAAAGACCTTTGCCCACTTTTGTAAGATGTTGATTATTGATTGCTTGGGGCATCATGTTTTTGTGACTTTCGAGTTAGTTGCAATCTGAT                  ]
[+] EMBL OSC225               [                                                                                                                                                                                                                                           GAGGAGATCAGTCGGTGCCAAGCAAGGAGGCGTCACCGCCATGGCGCA  CTGTAGCCGCCGCCGCCGTCATCGCAATCTTCGTCGTCGTCTTCCTCCTCTTCTCCCGTGTTCCCTTCCCCGAGGCCGTTCATGGCGCTCCCGCACCCGCCGCA GTAGGGTTCTTGGACGGCGCCG CGAGGGGCCCTCGTCGTCGATGAGCCCCACCTCCATTCTTGAGACCAAGCAGTTCTGCTGCTCGTCCGNCATGCCGNCGTTCCTGTCGGAGAGGAGCCTCAGGAAGGCCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU093962             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCGGGTGTTCGCCCGCCCGCCGTGGTNTCGCCCGGGGAGATGGCCATGTCGGAGGACTACACCTGCGTCATCTCCCGCGGCCCCAACCCGAGGACCACCCACATCTTCGACGACTGCATCGTCGAGAGCTGCGGCGATGTGCTCGTGGAGAAGGTGGCCGGCGGCGGCGGCGACGGCGACGGCGACGCGGTGCGAACCAATGGGTT CCT GAA CT CTT NTA CGCATGCAA CAAGCAGCTTGGA CATGGCAATGACATCTTCATCTACCGAGGTGATAAAGCATTCTGCAGCAGTGAGTGCCGGTACCAGGAGATGCTTTTCGACGAGGCGGTGGACAATTTGCGCTAGGCTGTTGAACGAAATGGTCGTTCCACATGAGTATTTCTATGGAGGAGGAAGAAGA CAATAGTCCTAAATAACTGAGATGAGATTTGTTTTCTTTCTTTTTTTGTTTTTGTTTTCTCCACTTTTGCGAGATTGGATGCTGTTTTTGGCCATGGAGAAGGGGGAATGATTTATTATTCTTTTTTGCGGATTAAAGACCTTTGCCCACTTTTGTAAGATGTTGATTATTGATTGCTTGGGGCATCATGTTTTTGTGACTTTCGAGTTAGTTGCAATCTGATGCTTTGCTCTAAAAA   ]
[+] EMBL AU101304             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTTCCCTGGAACCTCCTTGCTACCGCATGCAACCAAGCAGCTTGNACCATGGCAATGACATCTTCATCTACCGAGGTGATAAAGCATTCTGCAGCAGTGAGTCCCGGTACCAGGAGATGCTTTTCGACGAGNCGNTGGACAATTTGCGCTAGGCTGTTGAACGAAATGGTCGTTCCACATGAGTATTTCTATGGAGGAGGAAGAAGACCAATAGTCCTAAATAACTGAGATGAGATTTGTTTTCTTTCTTTTTTTGTTTTTGTTTTCTCCACTTTTGCGAGATTGGATGCTGTTTTTGGCCATGGAGAAGGGGGAATGATTTATTAGTCTTTTTTGCGGATTAAAGACCTTTGCCCACTTTTGTAAGATGTTGATTATTGATTGCTTGGGGCATCATGTTTTTGTGACTTTCGAGTTAGTTGCAATCTGATGCTTTGCTCTAAAAAAAA]




>consensus_8577#0
CCTTCCCCACCCCCCCCCATTTACTCGATCATCACAACGTGCCAATCAATTAATCGATCG
ATCAGTTTTGTGCGTACGTTAGCNTGTGGAGAGGGAGAGAAATGGACATGGAAATCGTGG
TTTTTCTGAGGTAATGTGCTGGAGGAGGAAGAAGAAGAAGAAGAAGAAGCAGCNATTGTT
GCAGCTGCAGCTTTCTGGGATTCCGAGGAGGCGATAAGCTTCGCAACAGATCGAGGAGAT
CAGTCGGTGCCAAGCAAGGAGGCGTCACCGCCATGGCGCAGCCTGAGCCGCCGCCGCCGT
CATCGCAATCTTCGTCGTCGTCTTCCTCCTCTTCTCCCGTGTTCCCTTCCCCGAGGCCGT
TCATGGCGCTCCCGCACCCGCCGCAGGCTGGGTTCTTGGACGGCGCCGCCGAGGGGCCCT
CGTCGTCGATGAGCCCCACCTCCATTCTTGAGACCAAGCAGTTCTGCTGCTCGTCCGCCA
TGCCGCCGTTCCTGTCGGAGAGGAGCCTCAGGAAGGCCCACGTGGAGATGGCCGCCGCAC
CGCCGGAGCCGGCCGGCGTCGGCCTCGCCGACGTGCTCCGGGAGCACCACGGGGGCGGCA
AGGCCGGCGGCGGCAAGGTGGTGTTCGGGTCGCAGCTCAGAATCCAGGTGCCCACGGGGA
GGGCCGTCGAGCTGGTGTCCTCCCCGATCGAGTTCGGCGTCAAGAACCGGGACGCCCACT
TGGCGGCGATGTCGCCGGCGAGGAGGTTCCTGCCGGAGGTGGTCAGCTCGCCGTCCGCGC
GGGTGTTCGCCGCCGCCGTGGTGTCGCCCGGGGAGATGGCCATGTCGGAGGACTACACCT
GCGTCATCTCCCGCGGCCCCAACCCGAGGACCACCCACATCTTCGACGACTGCATCGTCG
AGAGCTGCGGCGATGTGCTCGTGGAGAAGGTGGCCGGCGGCGGCGGCGACGGCGACGGCG
ACGCGGTGCGAACCAATGGGTTCCTGAACTCTTGCTACGCATGCAACAAGCAGCTTGGAC
ATGGCAATGACATCTTCATCTACCGAGGTGATAAAGCATTCTGCAGCAGTGAGTGCCGGT
ACCAGGAGATGCTTTTCGACGAGGCGGTGGACAATTTGCGCTAGGCTGTTGAACGAAATG
GTCGTTCCACATGAGTATTTCTATGGAGGAGGAAGAAGACAATAGTCCTAAATAACTGAG
ATGAGATTTGTTTTCTTTCTTTTTTTGTTTTTGTTTTCTCCACTTTTGCGAGATTGGATG
CTGTTTTTGGCCATGGAGAAGGGGGAATGATTTATTAGTCTTTTTTGCGGATTAAAGACC
TTTGCCCACTTTTGTAAGATGTTGATTATTGATTGCTTGGGGCATCATGTTTTTGTGACT
TTCGAGTTAGTTGCAATCTGATGCTTTGCTCTAAAAAAAA
clustalw multiple alignements is not computed in this case