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Oryza sativa
cluster # 8607 cluster # 8607       Sequences # 5       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8607#0 length = 2865 sequences # 4  
 consensus_8607#1 length = 514 sequences # 1  
consensusID : consensus_8607#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2865
fasta sequence 
                              [TCACGCGCGCTCGCCACCGCCCTCCTTGCTCGTCCTTCCTTCCTTGCATGACATGTCCGCGGCCGCGGTGCTCGCCGTCGTCGCCGCCGCCGTCGCAGCGCTCGCCGCGGCGGCGTCGGGCTACGAGCTGACCAAGAACGGGACCGTCATCACCTACGACCGCCGGTCGCTGATCATCGACGGCCACCGGGAGATCTTCTTCTCCGGCTCCATCCACTACCCGCGGAGCCCGCCGGACACGTGGCCCGACCTCATCAGCAAGGCCAAGGAGGGCGGCCTCAACGTCATCGAGAGCTACGTCTTCTGGAACGGCCATGAGCCCGAGCAGGGCGTCTACAATTTTGAAGGGAGGTATGATTTGATCAAGTTCTTCAAGCTGATCCAGGAGAAGGAGATGTACGCCATTGTCAGGATCGGGCCCTTCGTGCAGGCTGAATGGAACCATGGAGGTCTGCCATATTGGCTCCGGGAGATCCCTGACATTATCTTCCGGACGAACAATGAGCCTTTCAAGAAGTACATGAAGCAGTTTGTCACTCTCATAGTGAACAAGCTCAAGGAAGCAAAGCTCTTCGCATCACAAGGAGGCCCCATCATTCTGGCACAGATTGAGAATGAGTACCAGCACCTGGAGGTGGCATTCAAAGAGGCTGGCACCAAGTACATCAACTGGGCAGCTAAGATGGCCATCGCAACCAACACTGGTGTCCCGTGGATCATGTGCAAGCAGACTAAAGCTCCTGGTGAAGTGATCCCTACCTGCAATGGGAGGCACTGTGGAGATACTTGGCCGGGTCCAGCTGACAAGAAGAAGCCCCTCTTGTGGACTGAAAACTGGACTGCTCAGTACAGAGTTTTCGGTGATCCACCGTCCCAACGTTCTGCGGAGGACATTGCCTTCTCCGTGGCGCGCTTCTTCTCCGTTGGCGGCACAATGGCAAACTACTACATGTACCATGGAGGAACCAACTTTGGAAGGAACGGCGCCGCGTTCGTGATGCCGAGATACTACGACGAGGCCCCCCTCGACGAATTCGGCCTGTACAAGGAGCCTAAATGGGGCCATCTCAGGGACCTGCACCACGCTCTCCGTCACTGCAAGAAGGCCCTCCTCTGGGGCAACCCCTCCGTTCAGCCCCTCGGCAAACTCTACGAGGCTCGGGTGTTCGAGATGAAGGAGAAGAACGTGTGCGTGGCGTTCCTGTCGAACCACAACACCAAGGAGGACGGGACGGTGACGTTCAGGGGGCAGAAGTACTTCGTGGCGCGGCGGTCGATCAGCATCCTCGCCGACTGCAAGACGGTGGTGTTCAGCACGCAGCACGTCAACTCGCAGCACAACCAGCGCACCTTCCACTTCGCCGACCAGACGGTGCAGGACAACGTGTGGGAGATGTACAGTGAGGAGAAGATCCCCCGCTACAGCAAGACCTCCATCCGCACACAGAGGCCACTCGAGCAGTACAACCAGACCAAGGACAAGACCGACTACCTCTGGTACACCACCAGCTTCCGGCTGGAGACGGACGACCTGCCGTACCGGAAGGAGGTCAAGCCGGTGCTGGAGGTGAGCAGCCATGGACACGCCATCGTGGCGTTTGTCAATGACGCTTTCGTAGGGTGCGGGCACGGGACGAAGATCAACAAGGCGTTCACGATGGAGAAGGCGATGGATCTCAAAGTGGGCGTCAACCACGTCGCCATCCTCTCCTCCACGCTGGGTCTCATGAACAGTGGGTCATACCTGGAGCACCGGATGGCCAGGGTGTACACGGTGACGATCCGGGGGCTGAACACGGGGACGCTGGACCTGACGACGAACGGGTGGGGGCACGTGGTGGGGCTCGACGGCGAGCGGCGGCGGGTGCACTCGGAGCAAGGGATGGGCGCGGTGGCGTGGAAGCCCGGGAAGGACAACCAGCCGCTGACGTGGTACCGGCGGCGGTTCGACCCGCCGTCGGGGACCGACCCGGTGGTGATCGACCTCACCCCCATGGGGAAGGGCTTCCTCTTCGTCAACGGCGAGGGCCTCGGCCGCTACTGGGTCTCCTACCACCACGCCCTCGGCAAGCCGTCGCAGTACCTCTACCACGTCCCGAGGTCGCTGCTCCGCCCCAAGGGCAACACGCTCATGTTCTTCGAGGAGGAAGGGGGCAAGCCCGACGCCATCATGATCCTGACGGTGAAGCGGGACAACATCTGCACCTTCATGACGGAGAAGAACCCGGCGCACGTCCGGTGGTCGTGGGAGAGCAAGGACAGCCAACCCAAGGCGGTGGCCGGCGCCGGCGCCGGCGCCGGCGG-CC-TCAAGCCGACGGCGGTGCTGTCGTGCCCGACCAAGAAGACCATCCAGTCCGTGGTGTTCGCCAGCTACGGCAACCCGCTCGGCATCTGCGGCAACTACACCGTCGGCAGCTGCCACGCGCCGCGCACCAAGG-AGGTGGTCG-AGAAGGCCTGCA-TCGGCCGGAAGACCTGCTCCC-TCGTCGTC-T-CCAGCGAGGTC-TACGGCGGCGACGT-CCACTGCCCCGGCACCACCGGCACGCTCGCCGT-CCAGG-CCAAGTGCT-CCAAGAGGCCTCCTCGTTCCGCCGCCACCGCGCAATAAGCTAGCCAGCCGCCACATCTCTCTTCTTGTCTCTCATCAGATTCTCAGATAGTTAAAGCTTTGACCTGCTGCTGCTGCCGCCGCTGCTATTGTACTTTGATTGGTTCCATCCATCATCGATCTCACTCACTTCACTGGGGAATTATTTAGGCAAACAATCAATTCATGCTCAGCTCCTTGTATGCACCATCGTCCATGGTTTTATATGTAGGTAACTGTAGATTGATTAATTGTTGATGCAAATAAATACTAGTCCATTCCAAAAA]

[+] EMBL AK069066             [TCACGCGCGCTCGCCACCGCCCTCCTTGCTCGTCCTTCCTTCCTTGCATGACATGTCCGCGGCCGCGGTGCTCGCCGTCGTCGCCGCCGCCGTCGCAGCGCTCGCCGCGGCGGCGTCGGGCTACGAGCTGACCAAGAACGGGACCGTCATCACCTACGACCGCCGGTCGCTGATCATCGACGGCCACCGGGAGATCTTCTTCTCCGGCTCCATCCACTACCCGCGGAGCCCGCCGGACACGTGGCCCGACCTCATCAGCAAGGCCAAGGAGGGCGGCCTCAACGTCATCGAGAGCTACGTCTTCTGGAACGGCCATGAGCCCGAGCAGGGCGTCTACAATTTTGAAGGGAGGTATGATTTGATCAAGTTCTTCAAGCTGATCCAGGAGAAGGAGATGTACGCCATTGTCAGGATCGGGCCCTTCGTGCAGGCTGAATGGAACCATGGAGGTCTGCCATATTGGCTCCGGGAGATCCCTGACATTATCTTCCGGACGAACAATGAGCCTTTCAAGAAGTACATGAAGCAGTTTGTCACTCTCATAGTGAACAAGCTCAAGGAAGCAAAGCTCTTCGCATCACAAGGAGGCCCCATCATTCTGGCACAGATTGAGAATGAGTACCAGCACCTGGAGGTGGCATTCAAAGAGGCTGGCACCAAGTACATCAACTGGGCAGCTAAGATGGCCATCGCAACCAACACTGGTGTCCCGTGGATCATGTGCAAGCAGACTAAAGCTCCTGGTGAAGTGATCCCTACCTGCAATGGGAGGCACTGTGGAGATACTTGGCCGGGTCCAGCTGACAAGAAGAAGCCCCTCTTGTGGACTGAAAACTGGACTGCTCAGTACAGAGTTTTCGGTGATCCACCGTCCCAACGTTCTGCGGAGGACATTGCCTTCTCCGTGGCGCGCTTCTTCTCCGTTGGCGGCACAATGGCAAACTACTACATGTACCATGGAGGAACCAACTTTGGAAGGAACGGCGCCGCGTTCGTGATGCCGAGATACTACGACGAGGCCCCCCTCGACGAATTCGGCCTGTACAAGGAGCCTAAATGGGGCCATCTCAGGGACCTGCACCACGCTCTCCGTCACTGCAAGAAGGCCCTCCTCTGGGGCAACCCCTCCGTTCAGCCCCTCGGCAAACTCTACGAGGCTCGGGTGTTCGAGATGAAGGAGAAGAACGTGTGCGTGGCGTTCCTGTCGAACCACAACACCAAGGAGGACGGGACGGTGACGTTCAGGGGGCAGAAGTACTTCGTGGCGCGGCGGTCGATCAGCATCCTCGCCGACTGCAAGACGGTGGTGTTCAGCACGCAGCACGTCAACTCGCAGCACAACCAGCGCACCTTCCACTTCGCCGACCAGACGGTGCAGGACAACGTGTGGGAGATGTACAGTGAGGAGAAGATCCCCCGCTACAGCAAGACCTCCATCCGCACACAGAGGCCACTCGAGCAGTACAACCAGACCAAGGACAAGACCGACTACCTCTGGTACACCACCAGCTTCCGGCTGGAGACGGACGACCTGCCGTACCGGAAGGAGGTCAAGCCGGTGCTGGAGGTGAGCAGCCATGGACACGCCATCGTGGCGTTTGTCAATGACGCTTTCGTAGGGTGCGGGCACGGGACGAAGATCAACAAGGCGTTCACGATGGAGAAGGCGATGGATCTCAAAGTGGGCGTCAACCACGTCGCCATCCTCTCCTCCACGCTGGGTCTCATGAACAGTGGGTCATACCTGGAGCACCGGATGGCCAGGGTGTACACGGTGACGATCCGGGGGCTGAACACGGGGACGCTGGACCTGACGACGAACGGGTGGGGGCACGTGGTGGGGCTCGACGGCGAGCGGCGGCGGGTGCACTCGGAGCAAGGGATGGGCGCGGTGGCGTGGAAGCCCGGGAAGGACAACCAGCCGCTGACGTGGTACCGGCGGCGGTTCGACCCGCCGTCGGGGACCGACCCGGTGGTGATCGACCTCACCCCCATGGGGAAGGGCTTCCTCTTCGTCAACGGCGAGGGCCTCGGCCGCTACTGGGTCTCCTACCACCACGCCCTCGGCAAGCCGTCGCAGTACCTCTACCACGTCCCGAGGTCGCTGCTCCGCCCCAAGGGCAACACGCTCATGTTCTTCGAGGAGGAAGGGGGCAAGCCCGACGCCATCATGATCCTGACGGTGAAGCGGGACAACATCTGCACCTTCATGACGGAGAAGAACCCGGCGCACGTCCGGTGGTCGTGGGAGAGCAAGGACAGCCAACCCAAGGCGGTGGCCGGCGCCGGCGCCGGCGCCGGCGG CC TCAAGCCGACGGCGGTGCTGTCGTGCCCGACCAAGAAGACCATCCAGTCCGTGGTGTTCGCCAGCTACGGCAACCCGCTCGGCATCTGCGGCAACTACACCGTCGGCAGCTGCCACGCGCCGCGCACCAAGG AGGTGGTCG AGAAGGCCTGCA TCGGCCGGAAGACCTGCTCCC TCGTCGTC T CCAGCGAGGTC TACGGCGGCGACGT CCACTGCCCCGGCACCACCGGCACGCTCGCCGT CCAGG CCAAGTGCT CCAAGAGGCCTCCTCGTTCCGCCGCCACCGCGCAATAAGCTAGCCAGCCGCCACATCTCTCTTCTTGTCTCTCATCAGATTCTCAGATAGTTAAAGCTTTGACCTGCTGCTGCTGCCGCCGCTGCTATTGTACTTTGATTGGTTCCATCCATCATCGATCTCACTCACTTCACTGGGGAATTATTTAGGCAAACAATCAATTCATGCTCAGCTCCTTGTATGCACCATCGTCCATGGTTTTATATGTAGGTAACTGTAGATTGATTAATTGTTGATGCAAATAAATACTAGTCCATT       ]
[+] EMBL AK070916             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGCACCTGGAGGTGGCATTCAAAGAGGCTGGCACCAAGTACATCAACTGGGCAGCTAAGATGGCCATCGCAACCAACACTGGTGTCCCGTGGATCATGTGCAAGCAGACTAAAGCTCCTGGTGAAGTGATCCCTACCTGCAATGGGAGGCACTGTGGAGATACTTGGCCGGGTCCAGCTGACAAGAAGAAGCCCCTCTTGTGGACTGAAAACTGGACTGCTCAGTACAGAGTTTTCGGTGATCCACCGTCCCAACGTTCTGCGGAGGACATTGCCTTCTCCGTGGCGCGCTTCTTCTCCGTTGGCGGCACAATGGCAAACTACTACATGTACCATGGAGGAACCAACTTTGGAAGGAACGGCGCCGCGTTCGTGATGCCGAGATACTACGACGAGGCCCCCCTCGACGAATTCGGCCTGTACAAGGAGCCTAAATGGGGCCATCTCAGGGACCTGCACCACGCTCTCCGTCACTGCAAGAAGGCCCTCCTCTGGGGCAACCCCTCCGTTCAGCCCCTCGGCAAACTCTACGAGGCTCGGGTGTTCGAGATGAAGGAGAAGAACGTGTGCGTGGCGTTCCTGTCGAACCACAACACCAAGGAGGACGGGACGGTGACGTTCAGGGGGCAGAAGTACTTCGTGGCGCGGCGGTCGATCAGCATCCTCGCCGACTGCAAGACGGTGGTGTTCAGCACGCAGCACGTCAACTCGCAGCACAACCAGCGCACCTTCCACTTCGCCGACCAGACGGTGCAGGACAACGTGTGGGAGATGTACAGTGAGGAGAAGATCCCCCGCTACAGCAAGACCTCCATCCGCACACAGAGGCCACTCGAGCAGTACAACCAGACCAAGGACAAGACCGACTACCTCTGGTACACCACCAGCTTCCGGCTGGAGACGGACGACCTGCCGTACCGGAAGGAGGTCAAGCCGGTGCTGGAGGTGAGCAGCCATGGACACGCCATCGTGGCGTTTGTCAATGACGCTTTCGTAGGGTGCGGGCACGGGACGAAGATCAACAAGGCGTTCACGATGGAGAAGGCGATGGATCTCAAAGTGGGCGTCAACCACGTCGCCATCCTCTCCTCCACGCTGGGTCTCATGGACAGTGGGTCATACCTGGAGCACCGGATGGCCGGGGTGTACACGGTGACGATCCGGGGGCTGAACACGGGGACGCTGGACCTGACGACGAACGGGTGGGGGCACGTGGTGGGGCTCGACGGCGAGCGGCGGCGGGTGCACTCGGAGCAAGGGATGGGCGCGGTGGCGTGGAAGCCCGGGAAGGACAACCAGCCGCTGACGTGGTACCGGCGGCGGTTCGACCCGCCGTCGGGGACCGACCCGGTGGTGATCGACCTCACCCCCATGGGGAAGGGCTTCCTCTTCGTCAACGGCGAGGGCCTCGGCCGCTACTGGGTCTCCTACCACCACGCCCTCGGCAAGCCGTCGCAGTACCTCTACCACGTCCCGAGGTCGCTGCTCCGCCCCAAGGGCAACACGCTCATGTTCTTCGAGGAGGAAGGGGGCAAGCCCGACGCCATCATGATCCTGACGGTGAAGCGGGACAACATCTGCACCTTCATGACGGAGAAGAACCCGGCGCACGTCCGGTGGTCGTGGGAGAGCAAGGACAGCCAACCCAAGGCGGTGGCCGGCGCCGGCGCCGGCGCCGGCGG CC TCAAGCCGACGGCGGTGCTGTCGTGCCCGACCAAGAAGACCATCCAGTCCGTGGTGTTCGCCAGCTACGGCAACCCGCTCGGCATCTGCGGCAACTACACCGTCGGCAGCTGCCACGCGCCGCGCACCAAGG AGGTGGTCG AGAAGGCCTGCA TCGGCCGGAAGACCTGCTCCC TCGTCGTC T CCAGCGAGGTC TACGGCGGCGACGT CCACTGCCCCGGCACCACCGGCACGCTCGCCGT CCAGG CCAAGTGCT CCAAGAGGCCTCCTCGTTCCGCCGCCACCGCGCAATAAGCTAGCCAGCCGCCACATCTCTCTTCTTGTCTCTCATCAGATTCTCAGATAGTTAAAGCTTTGACCTGCTGCTGCTGCCGCCGCTGCTATTGTACTTTGATTGGTTCCATCCATCATCGATCTCACTCACTTCACTGGGGAATTATTTAGGCAAACAATCAATTCATGCTCAGCTCCTTGTATGCACCATCGTCCATGGTTTTATATGTAGGTAACTGTAGATTGATTAA                                    ]
[+] EMBL C99099               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCTTCGAGGAGGAAGGGGGCAAGCCCGACGCCATCATGATCCTGACGGTGAAGCGGGACAACATCTGCACCTTCATGACGGAGAAGAACCCGGCGCACGTCCGGTGGTCGTGGGAGAGCAAGGACAGCCAACCCAAGGCGGTGGCCGGCGCCGGCGCCGGCGCC GCGGNCCTTCAAGCCGACGGGGNTGCTGTCGTGCCCGACCAAGAAGACCATCCAGTCCGTGGTGTTCGCCAGCTACGGCAACCCGCTCGGCATCTGCGGCAACTACACCGTCGGCAGCTGCCACGCGCCGCGTACCAAGG AGGTGGTCG AGAAGGCCTGCATTCGGCCGGAAGACCTGCTCCCTTCGTCGTCTT CCAGCGA GTCTTACGGCGGCGACGT NCACTGGCCCGGCACCANCGGCACGTTCGCCGTtcc                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C99100               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAGGAAGTTGTTCGAAGAA GCCTGCA TCGGCCGGAAGACCTGCTCCC TCGTCGTC TCCCAGCGAGGTC TACGGCGGCGACGTCCCACTGCCCCGGCACCACCGGCACGCTCGCCGTCCCAGGCCCAAGTGCTCCCAAGAGGCCTCCTCGTTCCGCCGCCACCGCGCAATAAGCTAGCCAGCCGCCACATCTCTCTTCTTGTCTCTCATCAGATTCTCAGATAGTTAAAGCTTTGACCTGCTGCTGCTGCCGCCGCTGCTATTGTACTTTGATTGGTTCCATCCATCATCGATCTCACTCACTTCACTGGGGAATTATTTAGGCAAACAATCAATTCATGCTCAGCTCCTTGTATGCACCATCGTCCATGGTTTTATATGTAGGTAACTGTAGATTGATTAATTGTTGATGCAAATAAATACTAGTCCATTCCAAAAA]




>consensus_8607#0
TCACGCGCGCTCGCCACCGCCCTCCTTGCTCGTCCTTCCTTCCTTGCATGACATGTCCGC
GGCCGCGGTGCTCGCCGTCGTCGCCGCCGCCGTCGCAGCGCTCGCCGCGGCGGCGTCGGG
CTACGAGCTGACCAAGAACGGGACCGTCATCACCTACGACCGCCGGTCGCTGATCATCGA
CGGCCACCGGGAGATCTTCTTCTCCGGCTCCATCCACTACCCGCGGAGCCCGCCGGACAC
GTGGCCCGACCTCATCAGCAAGGCCAAGGAGGGCGGCCTCAACGTCATCGAGAGCTACGT
CTTCTGGAACGGCCATGAGCCCGAGCAGGGCGTCTACAATTTTGAAGGGAGGTATGATTT
GATCAAGTTCTTCAAGCTGATCCAGGAGAAGGAGATGTACGCCATTGTCAGGATCGGGCC
CTTCGTGCAGGCTGAATGGAACCATGGAGGTCTGCCATATTGGCTCCGGGAGATCCCTGA
CATTATCTTCCGGACGAACAATGAGCCTTTCAAGAAGTACATGAAGCAGTTTGTCACTCT
CATAGTGAACAAGCTCAAGGAAGCAAAGCTCTTCGCATCACAAGGAGGCCCCATCATTCT
GGCACAGATTGAGAATGAGTACCAGCACCTGGAGGTGGCATTCAAAGAGGCTGGCACCAA
GTACATCAACTGGGCAGCTAAGATGGCCATCGCAACCAACACTGGTGTCCCGTGGATCAT
GTGCAAGCAGACTAAAGCTCCTGGTGAAGTGATCCCTACCTGCAATGGGAGGCACTGTGG
AGATACTTGGCCGGGTCCAGCTGACAAGAAGAAGCCCCTCTTGTGGACTGAAAACTGGAC
TGCTCAGTACAGAGTTTTCGGTGATCCACCGTCCCAACGTTCTGCGGAGGACATTGCCTT
CTCCGTGGCGCGCTTCTTCTCCGTTGGCGGCACAATGGCAAACTACTACATGTACCATGG
AGGAACCAACTTTGGAAGGAACGGCGCCGCGTTCGTGATGCCGAGATACTACGACGAGGC
CCCCCTCGACGAATTCGGCCTGTACAAGGAGCCTAAATGGGGCCATCTCAGGGACCTGCA
CCACGCTCTCCGTCACTGCAAGAAGGCCCTCCTCTGGGGCAACCCCTCCGTTCAGCCCCT
CGGCAAACTCTACGAGGCTCGGGTGTTCGAGATGAAGGAGAAGAACGTGTGCGTGGCGTT
CCTGTCGAACCACAACACCAAGGAGGACGGGACGGTGACGTTCAGGGGGCAGAAGTACTT
CGTGGCGCGGCGGTCGATCAGCATCCTCGCCGACTGCAAGACGGTGGTGTTCAGCACGCA
GCACGTCAACTCGCAGCACAACCAGCGCACCTTCCACTTCGCCGACCAGACGGTGCAGGA
CAACGTGTGGGAGATGTACAGTGAGGAGAAGATCCCCCGCTACAGCAAGACCTCCATCCG
CACACAGAGGCCACTCGAGCAGTACAACCAGACCAAGGACAAGACCGACTACCTCTGGTA
CACCACCAGCTTCCGGCTGGAGACGGACGACCTGCCGTACCGGAAGGAGGTCAAGCCGGT
GCTGGAGGTGAGCAGCCATGGACACGCCATCGTGGCGTTTGTCAATGACGCTTTCGTAGG
GTGCGGGCACGGGACGAAGATCAACAAGGCGTTCACGATGGAGAAGGCGATGGATCTCAA
AGTGGGCGTCAACCACGTCGCCATCCTCTCCTCCACGCTGGGTCTCATGAACAGTGGGTC
ATACCTGGAGCACCGGATGGCCAGGGTGTACACGGTGACGATCCGGGGGCTGAACACGGG
GACGCTGGACCTGACGACGAACGGGTGGGGGCACGTGGTGGGGCTCGACGGCGAGCGGCG
GCGGGTGCACTCGGAGCAAGGGATGGGCGCGGTGGCGTGGAAGCCCGGGAAGGACAACCA
GCCGCTGACGTGGTACCGGCGGCGGTTCGACCCGCCGTCGGGGACCGACCCGGTGGTGAT
CGACCTCACCCCCATGGGGAAGGGCTTCCTCTTCGTCAACGGCGAGGGCCTCGGCCGCTA
CTGGGTCTCCTACCACCACGCCCTCGGCAAGCCGTCGCAGTACCTCTACCACGTCCCGAG
GTCGCTGCTCCGCCCCAAGGGCAACACGCTCATGTTCTTCGAGGAGGAAGGGGGCAAGCC
CGACGCCATCATGATCCTGACGGTGAAGCGGGACAACATCTGCACCTTCATGACGGAGAA
GAACCCGGCGCACGTCCGGTGGTCGTGGGAGAGCAAGGACAGCCAACCCAAGGCGGTGGC
CGGCGCCGGCGCCGGCGCCGGCGGCCTCAAGCCGACGGCGGTGCTGTCGTGCCCGACCAA
GAAGACCATCCAGTCCGTGGTGTTCGCCAGCTACGGCAACCCGCTCGGCATCTGCGGCAA
CTACACCGTCGGCAGCTGCCACGCGCCGCGCACCAAGGAGGTGGTCGAGAAGGCCTGCAT
CGGCCGGAAGACCTGCTCCCTCGTCGTCTCCAGCGAGGTCTACGGCGGCGACGTCCACTG
CCCCGGCACCACCGGCACGCTCGCCGTCCAGGCCAAGTGCTCCAAGAGGCCTCCTCGTTC
CGCCGCCACCGCGCAATAAGCTAGCCAGCCGCCACATCTCTCTTCTTGTCTCTCATCAGA
TTCTCAGATAGTTAAAGCTTTGACCTGCTGCTGCTGCCGCCGCTGCTATTGTACTTTGAT
TGGTTCCATCCATCATCGATCTCACTCACTTCACTGGGGAATTATTTAGGCAAACAATCA
ATTCATGCTCAGCTCCTTGTATGCACCATCGTCCATGGTTTTATATGTAGGTAACTGTAG
ATTGATTAATTGTTGATGCAAATAAATACTAGTCCATTCCAAAAA

consensusID : consensus_8607#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 514
fasta sequence 
                              [TTTTTTTTTTTTTTTTTTCATCCATCTAATTAAATCGTGTCTAAATGAATGGCTGTTTAATTGTTTCTCAGTACAATTTTGAAGGGAGGTATGATTTGATCAAGTTCTTCAAGCTGATCCAGGAGAAGGAGATGTACGCCATGGTCAGGATCGGGCCCTTCGTGCAGGCTGAATGGAACCAGNGGGTTTGTTTGTGTGGCTTCACCATCTCATTCAGACATGCATGCGTGTTCATCTCTGCATTTTGCAACTCCGTGTTTATATTTTNGCCTCTTCTTCTGTGTTGTTGTTGTTTTTCTTCAGAGGTCTGCCATATNGGCTCCGGGAGATCCCTGACATTATCTTCCGGACGAACAATGAGCCTTTCAAGGTGACAAATCTGACAACATCATGATCCAATTTTCTTACGCAGTATGACTGAGACAACTAATGTGCTCCAGTTTCTGAAAACTTGTTGGGTGATTGTCCGAAATACTGGCCAGGGTGTATCTCTGGAAATGGCAGGAATGGTTCT]

[-] EMBL BM420235             [TTTTTTTTTTTTTTTTTTCATCCATCTAATTAAATCGTGTCTAAATGAATGGCTGTTTAATTGTTTCTCAGTACAATTTTGAAGGGAGGTATGATTTGATCAAGTTCTTCAAGCTGATCCAGGAGAAGGAGATGTACGCCATGGTCAGGATCGGGCCCTTCGTGCAGGCTGAATGGAACCAGNGGGTTTGTTTGTGTGGCTTCACCATCTCATTCAGACATGCATGCGTGTTCATCTCTGCATTTTGCAACTCCGTGTTTATATTTTNGCCTCTTCTTCTGTGTTGTTGTTGTTTTTCTTCAGAGGTCTGCCATATNGGCTCCGGGAGATCCCTGACATTATCTTCCGGACGAACAATGAGCCTTTCAAGGTGACAAATCTGACAACATCATGATCCAATTTTCTTACGCAGTATGACTGAGACAACTAATGTGCTCCAGTTTCTGAAAACTTGTTGGGTGATTGTCCGAAATACTGGCCAGGGTGTATCTCTGGAAATGGCAGGAATGGTTCT]




>consensus_8607#1
TTTTTTTTTTTTTTTTTTCATCCATCTAATTAAATCGTGTCTAAATGAATGGCTGTTTAA
TTGTTTCTCAGTACAATTTTGAAGGGAGGTATGATTTGATCAAGTTCTTCAAGCTGATCC
AGGAGAAGGAGATGTACGCCATGGTCAGGATCGGGCCCTTCGTGCAGGCTGAATGGAACC
AGNGGGTTTGTTTGTGTGGCTTCACCATCTCATTCAGACATGCATGCGTGTTCATCTCTG
CATTTTGCAACTCCGTGTTTATATTTTNGCCTCTTCTTCTGTGTTGTTGTTGTTTTTCTT
CAGAGGTCTGCCATATNGGCTCCGGGAGATCCCTGACATTATCTTCCGGACGAACAATGA
GCCTTTCAAGGTGACAAATCTGACAACATCATGATCCAATTTTCTTACGCAGTATGACTG
AGACAACTAATGTGCTCCAGTTTCTGAAAACTTGTTGGGTGATTGTCCGAAATACTGGCC
AGGGTGTATCTCTGGAAATGGCAGGAATGGTTCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8607#0      TCACGCGCGCTCGCCACCGCCCTCCTTGCTCGTCCTTCCTTCCTTGCATGACATGTCCGC 60
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      GGCCGCGGTGCTCGCCGTCGTCGCCGCCGCCGTCGCAGCGCTCGCCGCGGCGGCGTCGGG 120
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      CTACGAGCTGACCAAGAACGGGACCGTCATCACCTACGACCGCCGGTCGCTGATCATCGA 180
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      CGGCCACCGGGAGATCTTCTTCTCCGGCTCCATCCACTACCCGCGGAGCCCGCCGGACAC 240
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      GTGGCCCGACCTCATCAGCAAGGCCAAGGAGGGCGGCCTCAACGTCATCGAGAGCTACGT 300
consensus_8607#1      ------------------TTTTTTTTTTTTTTTTTTCATCCATCTAATTAAA--TCGTGT 40
                                                          * ** *  * **  *       **

consensus_8607#0      CTTCTGGAACGGCCATGAGCCCGAGCAGGGCGTCTACAATTTTGAAGGGAGGTATGATTT 360
consensus_8607#1      CTAAATGAATGGCTGTTTAATTGTTT---CTCAGTACAATTTTGAAGGGAGGTATGATTT 97
                      **    *** ***  *      *           **************************

consensus_8607#0      GATCAAGTTCTTCAAGCTGATCCAGGAGAAGGAGATGTACGCCATTGTCAGGATCGGGCC 420
consensus_8607#1      GATCAAGTTCTTCAAGCTGATCCAGGAGAAGGAGATGTACGCCATGGTCAGGATCGGGCC 157
                      ********************************************* **************

consensus_8607#0      CTTCGTGCAGGCTGAATGGAACCATGGAGGTCTGCCATATTGGCTCCGGGAGATCCCTGA 480
consensus_8607#1      CTTCGTGCAGGCTGAATGGAACCA-GNGGGTTTGTTTGTGTGGCTTCACCATCTCATTCA 216
                      ************************ *  *** **      ***** *   *  **  * *

consensus_8607#0      CATTATCTTCCG-GACGAACAATGAGCCTTTCAAG---AAGTACATGAAGCAGTTTGTCA 536
consensus_8607#1      GACATGCATGCGTGTTCATCTCTGCATTTTGCAACTCCGTGTTTATATTTTNGCCTCTTC 276
                       *    * * ** *   * *  **    ** ***      **  **      *  * *  

consensus_8607#0      CTCT-CATAGTGAACAAGCT-CAAGGAAGCAAAGCTCTTCGCATCACAAGGAGGCCCCAT 594
consensus_8607#1      TTCTGTGTTGTTGTTGTTTTTCTTCAGAGGTCTGCCATATNGGCTCCGGGAGATCCCTGA 336
                       ***   * **        * *     **    **  *        *  *    ***   

consensus_8607#0      CATTCTGGCACAGATTGAGAATGAGTACCAGCACCTGGAGGTGGCATTCAAAGAGGCTGG 654
consensus_8607#1      CATTATCTTCCGGACGAACAATGAGCCTT---TCAAGGTGACAAATCTGACAACATCATG 393
                      **** *    * **   * ******        *  ** *       * * *    *  *

consensus_8607#0      CACCAAGTACATCA-ACTGGGCAGCTAAGATGGCCATCGCAACCAACACTGGTGTCCCGT 713
consensus_8607#1      ATCCAATTTTCTTACGCAGTATGACTGAGACAACTAATGT-----GCTCCAGTTTCTGAA 448
                        **** *   * *  * *     ** ***   * *  *       * *  ** **    

consensus_8607#0      GGATCATGTGCAAGCAGACTAAAGCTCCTGGTGAAGTGATCCCTACCTGCAATGGGAGGC 773
consensus_8607#1      AACTTGTTGGGTGATTGTCCGAAA-TACTGGCCAGGGTGTATCT-CTGGAAATGGCAGGA 506
                         *  *  *      * *  **  * ****  * *   *  ** *  * ***** *** 

consensus_8607#0      ACTGTGGAGATACTTGGCCGGGTCCAGCTGACAAGAAGAAGCCCCTCTTGTGGACTGAAA 833
consensus_8607#1      ATGGTTCT---------------------------------------------------- 514
                      *  **                                                       

consensus_8607#0      ACTGGACTGCTCAGTACAGAGTTTTCGGTGATCCACCGTCCCAACGTTCTGCGGAGGACA 893
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      TTGCCTTCTCCGTGGCGCGCTTCTTCTCCGTTGGCGGCACAATGGCAAACTACTACATGT 953
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      ACCATGGAGGAACCAACTTTGGAAGGAACGGCGCCGCGTTCGTGATGCCGAGATACTACG 1013
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      ACGAGGCCCCCCTCGACGAATTCGGCCTGTACAAGGAGCCTAAATGGGGCCATCTCAGGG 1073
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      ACCTGCACCACGCTCTCCGTCACTGCAAGAAGGCCCTCCTCTGGGGCAACCCCTCCGTTC 1133
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      AGCCCCTCGGCAAACTCTACGAGGCTCGGGTGTTCGAGATGAAGGAGAAGAACGTGTGCG 1193
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      TGGCGTTCCTGTCGAACCACAACACCAAGGAGGACGGGACGGTGACGTTCAGGGGGCAGA 1253
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      AGTACTTCGTGGCGCGGCGGTCGATCAGCATCCTCGCCGACTGCAAGACGGTGGTGTTCA 1313
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      GCACGCAGCACGTCAACTCGCAGCACAACCAGCGCACCTTCCACTTCGCCGACCAGACGG 1373
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      TGCAGGACAACGTGTGGGAGATGTACAGTGAGGAGAAGATCCCCCGCTACAGCAAGACCT 1433
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      CCATCCGCACACAGAGGCCACTCGAGCAGTACAACCAGACCAAGGACAAGACCGACTACC 1493
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      TCTGGTACACCACCAGCTTCCGGCTGGAGACGGACGACCTGCCGTACCGGAAGGAGGTCA 1553
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      AGCCGGTGCTGGAGGTGAGCAGCCATGGACACGCCATCGTGGCGTTTGTCAATGACGCTT 1613
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      TCGTAGGGTGCGGGCACGGGACGAAGATCAACAAGGCGTTCACGATGGAGAAGGCGATGG 1673
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      ATCTCAAAGTGGGCGTCAACCACGTCGCCATCCTCTCCTCCACGCTGGGTCTCATGAACA 1733
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      GTGGGTCATACCTGGAGCACCGGATGGCCAGGGTGTACACGGTGACGATCCGGGGGCTGA 1793
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      ACACGGGGACGCTGGACCTGACGACGAACGGGTGGGGGCACGTGGTGGGGCTCGACGGCG 1853
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      AGCGGCGGCGGGTGCACTCGGAGCAAGGGATGGGCGCGGTGGCGTGGAAGCCCGGGAAGG 1913
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      ACAACCAGCCGCTGACGTGGTACCGGCGGCGGTTCGACCCGCCGTCGGGGACCGACCCGG 1973
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      TGGTGATCGACCTCACCCCCATGGGGAAGGGCTTCCTCTTCGTCAACGGCGAGGGCCTCG 2033
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      GCCGCTACTGGGTCTCCTACCACCACGCCCTCGGCAAGCCGTCGCAGTACCTCTACCACG 2093
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      TCCCGAGGTCGCTGCTCCGCCCCAAGGGCAACACGCTCATGTTCTTCGAGGAGGAAGGGG 2153
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      GCAAGCCCGACGCCATCATGATCCTGACGGTGAAGCGGGACAACATCTGCACCTTCATGA 2213
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      CGGAGAAGAACCCGGCGCACGTCCGGTGGTCGTGGGAGAGCAAGGACAGCCAACCCAAGG 2273
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      CGGTGGCCGGCGCCGGCGCCGGCGCCGGCGGCCTCAAGCCGACGGCGGTGCTGTCGTGCC 2333
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      CGACCAAGAAGACCATCCAGTCCGTGGTGTTCGCCAGCTACGGCAACCCGCTCGGCATCT 2393
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      GCGGCAACTACACCGTCGGCAGCTGCCACGCGCCGCGCACCAAGGAGGTGGTCGAGAAGG 2453
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      CCTGCATCGGCCGGAAGACCTGCTCCCTCGTCGTCTCCAGCGAGGTCTACGGCGGCGACG 2513
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      TCCACTGCCCCGGCACCACCGGCACGCTCGCCGTCCAGGCCAAGTGCTCCAAGAGGCCTC 2573
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      CTCGTTCCGCCGCCACCGCGCAATAAGCTAGCCAGCCGCCACATCTCTCTTCTTGTCTCT 2633
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      CATCAGATTCTCAGATAGTTAAAGCTTTGACCTGCTGCTGCTGCCGCCGCTGCTATTGTA 2693
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      CTTTGATTGGTTCCATCCATCATCGATCTCACTCACTTCACTGGGGAATTATTTAGGCAA 2753
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      ACAATCAATTCATGCTCAGCTCCTTGTATGCACCATCGTCCATGGTTTTATATGTAGGTA 2813
consensus_8607#1      ------------------------------------------------------------
                                                                                  

consensus_8607#0      ACTGTAGATTGATTAATTGTTGATGCAAATAAATACTAGTCCATTCCAAAAA 2865
consensus_8607#1      ----------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)