cluster # 8617

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8617 cluster # 8617 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8617#0 length = 2061 sequences # 5
consensusID : consensus_8617#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2061
fasta sequence
                              [ACCCTACTCCCCCGCCGAACCCTAACCCTAGCTCCCCCTCCTCCTTTCCGCCACTCGCCGCCGCCGCCGCCGCCGGGGCGGGCGGCTCCTGCTGGATTGAGGTACCACGGGTAGCTAAGTCGGTAGGCGCCTGATTTGGGAGATCAGGGTGTCCTGTAATGGAGGGGCATGGCAACCCTCCACTGAATGCGGCGGAAGCAGTTTTGAAGAGGCCCAGGAGTGTTGCTTCAAGGAAGCCGAGATCGAAGGAGCAGCTCATTAGTGAGTTCAAGGACCTCTCGTGCACGCCGTCGCGGAGCATCTCCCCGGAAGATGATGCTGGCGTTGAGGGCAGTGGGCATCGGCGCAAGGAGTTGTACCTCAATGGCCCTGAGGCTAGGGGATCCGTACCACACAGGAGTGACGCGTCCAGAAAAATAAAGAGAGATGATAATAGAGCTGCAGGAGACCATGATGAACAAAATAAGAGCAGCAAATCAAAGGATGGCAAGCATACTAGTGAGGGGGTCCTGGCTCTTGCCTGCACAAGAAACTCTGGATCCCCTGATGGCCAGCATTTGCCTCCAAAAGACACTACTAGTATGCCAGGTTTGAGAAAAGTAAAGCTCAAGGTTAGCGGGATTACTCGACCTCTACATACAAAAAACATCCAAGAGGCAAGTGATGGTGGCACGCTCGGCACATCAGATGGCTCTTCTCAGCGGCATAAGCAAAAGGATTCTGGTGGGCACAAACATCACCAAGATAAGCATGATGTTTCACCATCTTCAGACCTTGTTCGCAAGAGCAAACGGATTCCTAAGAAGCGAACACTTGATGGTGATTCTGGTGATGAAGATGGTGGATCAGGCTATCTTGTAAAATTTAAGATAGCTAAGGTTGTGCCAGAACAATCTATAGCTACTGACCATGCTGGAGAGTATGATGAATCTCTTGAAGATGATATTAAGAAAAAGAGGCTGTCAAAGGTTTCCAAAAACAAGAGCCTTCCATATGAAGTGGACGAAGACTTCACTATGTACCGATCTGGCAGGGATGGTAGGAAGAAGTTGAAACTGGTGGATAGCGATGATTTTATTGAAGAGGAACCTGAGATGGATGAGCCAAAGAAGAGACTAAGTGAAGCTGATTCACATTCAGATGTAAAGAATGAAACTACTGGCCTTATAACCAGGCAGCGTGCTCTTCAAGGCAGAGGTGGCAATGGTGAAACTCTGATTGAATTTCCTGATGGATTACCAACTGCTTCATCGAGAAGGCAAAAGGATAAGGCTTCTGAAGTGGAGGCACAAGCCAAAAAGGCAGAAGCGGCTCAGAGGCGTAAATTGCAAGTTGAGAAGGCAGAGAGGGAACAACAGGCCGAAGCAGTGAGGAAAATCCTGGGTATTGATATTGAGAAGAAAAAAGAGGAGAGGAAACAGAAAGAGCGGGATGAGAAGGAAAAGCAAGAAAAAACAGAAGAATATAGAAGGAACTGCATCCAATGTGTCATGGGGCCAGAAGGAACTGTTGTCACATTTCCTGATAAGATGGGCCTCCCTAGCATATTTGACTCCAAGCCTATCAGCTATCCACCTCCAAGGGAGAAATGTGCAGGCCCTTCATGCACAAATCCATACAAGTACCGGGACTCAAAGACGAAGCTTCCGCTCTGCAG-CCTGCAGTGCTACAAGGCTGTCCAGGGAAGCTCTGAGGCTGCCCAGGGAAGCTCTGAGACGCTAACAT-GCTGATCTCAGAAATTAAAGGATGGTGGTGAGGCAATCGTGACT-GTTTTGTGGAACTGGAGAATTG-TGCTAGTTCCATTTGCCACCTTTGCTGCTTGTTCTTGTGTTGCCAATGTTACC-TTTTGCCAGTCCTAACAATCAACCAACCAACAGA--GGGGGT-GTCGCCTGCTGCTGGCCATCCTTTTGAC-TCGTTGTGGATGCAGCTGCAGTGTTCTCGATTAAGGATTAATTTAGGTGGTAGTCAGATGAATGAGAGTGATGTATACATTAGTTGTACAGTGATCATCCTACTCGTCATCGTTGGTCATGAAATCATCTTGAAAATTGTCTCTCTGTT]

[+] EMBL AK103214             [ACCCTACTCCCCCGCCGAACCCTAACCCTAGCTCCCCCTCCTCCTTTCCGCCACTCGCCGCCGCCGCCGCCGCCGGGGCGGGCGGCTCCTGCTGGATTGAGGTACCACGGGTAGCTAAGTCGGTAGGCGCCTGATTTGGGAGATCAGGGTGTCCTGTAATGGAGGGGCATGGCAACCCTCCACTGAATGCGGCGGAAGCAGTTTTGAAGAGGCCCAGGAGTGTTGCTTCAAGGAAGCCGAGATCGAAGGAGCAGCTCATTAGTGAGTTCAAGGACCTCTCGTGCACGCCGTCGCGGAGCATCTCCCCGGAAGATGATGCTGGCGTTGAGGGCAGTGGGCATCGGCGCAAGGAGTTGTACCTCAATGGCCCTGAGGCTAGGGGATCCGTACCACACAGGAGTGACGCGTCCAGAAAAATAAAGAGAGATGATAATAGAGCTGCAGGAGACCATGATGAACAAAATAAGAGCAGCAAATCAAAGGATGGCAAGCATACTAGTGAGGGGGTCCTGGCTCTTGCCTGCACAAGAAACTCTGGATCCCCTGATGGCCAGCATTTGCCTCCAAAAGACACTACTAGTATGCCAGGTTTGAGAAAAGTAAAGCTCAAGGTTAGCGGGATTACTCGACCTCTACATACAAAAAACATCCAAGAGGCAAGTGATGGTGGCACGCTCGGCACATCAGATGGCTCTTCTCAGCGGCATAAGCAAAAGGATTCTGGTGGGCACAAACATCACCAAGATAAGCATGATGTTTCACCATCTTCAGACCTTGTTCGCAAGAGCAAACGGATTCCTAAGAAGCGAACACTTGATGGTGATTCTGGTGATGAAGATGGTGGATCAGGCTATCTTGTAAAATTTAAGATAGCTAAGGTTGTGCCAGAACAATCTATAGCTACTGACCATGCTGGAGAGTATGATGAATCTCTTGAAGATGATATTAAGAAAAAGAGGCTGTCAAAGGTTTCCAAAAACAAGAGCCTTCCATATGAAGTGGACGAAGACTTCACTATGTACCGATCTGGCAGGGATGGTAGGAAGAAGTTGAAACTGGTGGATAGCGATGATTTTATTGAAGAGGAACCTGAGATGGATGAGCCAAAGAAGAGACTAAGTGAAGCTGATTCACATTCAGATGTAAAGAATGAAACTACTGGCCTTATAACCAGGCAGCGTGCTCTTCAAGGCAGAGGTGGCAATGGTGAAACTCTGATTGAATTTCCTGATGGATTACCAACTGCTTCATCGAGAAGGCAAAAGGATAAGGCTTCTGAAGTGGAGGCACAAGCCAAAAAGGCAGAAGCGGCTCAGAGGCGTAAATTGCAAGTTGAGAAGGCAGAGAGGGAACAACAGGCCGAAGCAGTGAGGAAAATCCTGGGTATTGATATTGAGAAGAAAAAAGAGGAGAGGAAACAGAAAGAGCGGGATGAGAAGGAAAAGCAAGAAAAAACAGAAGAATATAGAAGGAACTGCATCCAATGTGTCATGGGGCCAGAAGGAACTGTTGTCACATTTCCTGATAAGATGGGCCTCCCTAGCATATTTGACTCCAAGCCTATCAGCTATCCACCTCCAAGGGAGAAATGTGCAGGCCCTTCATGCACAAATCCATACAAGTACCGGGACTCGAAGACGAAGCTTCCGCTCTGCAG CCTGCAGTGCTACAAGGCTGTCCAGGGAAGCTCTGAGGCTGCCCAGGGAAGCTCTGAGACGCTAACAT GCTGATCTCAGAAATTAAAGGATGGTGGTGAGGCAATCGTGACT GTTTTGTGGAACTGGAGAATTG TGCTAGTTCCATTTGCCACCTTTGCTGCTTGTTCTTGTGTTGCCAATGTTACC TTTTGCCAGTCCTAACAATCAACCAACCAACAGA  GGGGGT GTCGCCTGCTGCTGGCCATCCTTTTGAC TCGTTGTGGATGCAGCTGCAGTGTTCTCGATTAAGGATTAATTTAGGTGGTAGTCAGATGAATGAGAGTGATGTATACATTAGTTGTACAGTGATCATCCTACTCGTCATCGTTGGTCATGAAATCATCTTGAAAATTGTCTCTCTGTT]
[+] EMBL CA999754             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACCATGCTGGAGAGTATGATGAATCTCTTGAAGATGATATTAAGAAAAAGAGGCTGTCAAAGGTTTCCAAAAACAAGAGCCTTCCATATGAAGTGGACGAAGACTTCACTATGTACCGATCTGGCAGGGATGGTAGGAAGAAGTTGAAACTGGTGGATAGCGATGATTTTATTGAAGAGGAACCTGAGATGGATGAGCCAAAGAAGAGACTAAGTGAAGCTGATTCACATTCAGATGTAAAGAATGAAACTACTGGCCTTATAACCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA765611             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACATTNAGATGTAAAGAATGAAACTACTGGCCTTATAA CNGGCAGCGTGCTCTTCAAGGCAGAGGTGGCAATGGTGAAACTCTGATTGAATTTCCTGATGGATTACCAACTGCTTCATCGAGAAGGCAAAAGGATAAGGCTTCTGAAGTGGAGGCACAAGCCAAAAAGGCAGAAGCGGCTCAGAGGCGTAAATTGCAAGTTGAGAAGGCAGAGAGGGAACAACAGGCCGAAGCAGTGAGGAAAATCCTGGGTATTGATATTGAGAAGAAAAAAGAGGAGAGGAAACAGAAAGAGCGGGATGAGAAGGAAAAGCAAGAAAAAACAGAAGAATATAGAAGGAACTGCATCCAATGTGTCATGGGGCCAGAAGGAACTGTTGTCACATTTCCTGATAAGATGGGCCTCCCTAGCATATTTGACTCCAAGCCTATCAGCTATCCACCTCCAAGGGAGAAATGTGCAGGCCCTTCATGCACAAATCCATACAAGTACCGGGACTCAAAGACGAAGCTTCCGCTCTGCAGCCCTGCAGTGCTACAAGGCTGTCCAGGGAAGCTCTGAGGCTGCCCAGGGAAGCTCTGAGACGCTAACATGGCTGATCTCAGAAATTAAAGGATGGTGGTGAGGCAATCGTGACTGGTTTTGTGGAACTGGAGAATTGNNGCTAGTTTCATTTGCCACCTTTGCTGCTTGNTCTTGNGTTGNCAATGGTACCTTTTTGCCAGTCCTAACAATCAACCAGCCAACAGANGGGGGGTGGTCGCCTGCTGCTGGCCATCCTTTTGACTTCGTTGNGGATGCAGCTtgc                                                                                                                                 ]
[+] EMBL CB097012             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     agggGAGAAGGAAAAGCAAGAAAAAACAGAAGAATATAGAGGGAACTGCATCCAATGTGTCATGGGGCCAGAAGGAACTGTTGTCACATTTCCTGATAAGATGGGCCTCCCTAGCATATTTGACTCCAAGCCTATCAGCTATCCACCTCCAAGGGAGAAATGTGCAGGCCCTTCATGCACAAATCCATACAAGTACCGGGACTCAAAGACGAAGCTTCCGCTCTGCAG CCTGCAGTGCTACAAGGCTGTCCAGGGAAGCTCTGAGGCTGCCCAGGGAAGCTCTGAGACGCTAACAT GCTGATCTCAGAAATTAAAGGATGGTGGTGAGGCAATCGTGACT GTTTTGTGGAACTGGAGAATTG TGCTAGTTCCATTTGCCACCTTTGCTGCTTGTTCTTGTGTTGCCAATGTTACC TTTTGCCAGTCCTAACAATCAACCAGCCAACAGA  GGGGGT GTCGCCTGCTGCTGGCCATCCTTTTGAC TCGTTGTGGATGCAGCTGCAGTGTTCTCGATTAAGGATTAATTTAGGTGGTAGTCAGATGAATGAGAGTGATGTATACATTAGTTGTACAGTGATCATCCTACTCGTCATCGNTGGTCA                              ]
[+] EMBL BM420760             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTGCAG CCTGCAGTGCTACAA GCTGTCCAGGGAAGCTCTGAGGCTGCCCAGGGAAGCTCTGAGACGCTAACAT GCTGATCTCAGAAATTAAAGGATGGTGGTGAGGC ATCGTGACT GTTTTGTGGAACTGGAGAATTG TGCTAGTTCCATTTGCCACCTTTGCTGCTTGTTCTTGTGTTGCCCATGTTACC TTTGGCCAGTCCTAAC ATCAACC ACCTACAGA  GGGGGT GTC CCTGCTGCTGGCCATCCTTTTGAC TCGTTGTGGATGCAGCTGCAGTGTTCTCGATTAAGGATTAATTTA GTGGTAGTCAGATGAATGAGAGTGATGTATACATTAGTTGTACAGTGATCNTCCTACTCGTCATCGTTGGTCATGAAAaa                       ]




>consensus_8617#0
ACCCTACTCCCCCGCCGAACCCTAACCCTAGCTCCCCCTCCTCCTTTCCGCCACTCGCCG
CCGCCGCCGCCGCCGGGGCGGGCGGCTCCTGCTGGATTGAGGTACCACGGGTAGCTAAGT
CGGTAGGCGCCTGATTTGGGAGATCAGGGTGTCCTGTAATGGAGGGGCATGGCAACCCTC
CACTGAATGCGGCGGAAGCAGTTTTGAAGAGGCCCAGGAGTGTTGCTTCAAGGAAGCCGA
GATCGAAGGAGCAGCTCATTAGTGAGTTCAAGGACCTCTCGTGCACGCCGTCGCGGAGCA
TCTCCCCGGAAGATGATGCTGGCGTTGAGGGCAGTGGGCATCGGCGCAAGGAGTTGTACC
TCAATGGCCCTGAGGCTAGGGGATCCGTACCACACAGGAGTGACGCGTCCAGAAAAATAA
AGAGAGATGATAATAGAGCTGCAGGAGACCATGATGAACAAAATAAGAGCAGCAAATCAA
AGGATGGCAAGCATACTAGTGAGGGGGTCCTGGCTCTTGCCTGCACAAGAAACTCTGGAT
CCCCTGATGGCCAGCATTTGCCTCCAAAAGACACTACTAGTATGCCAGGTTTGAGAAAAG
TAAAGCTCAAGGTTAGCGGGATTACTCGACCTCTACATACAAAAAACATCCAAGAGGCAA
GTGATGGTGGCACGCTCGGCACATCAGATGGCTCTTCTCAGCGGCATAAGCAAAAGGATT
CTGGTGGGCACAAACATCACCAAGATAAGCATGATGTTTCACCATCTTCAGACCTTGTTC
GCAAGAGCAAACGGATTCCTAAGAAGCGAACACTTGATGGTGATTCTGGTGATGAAGATG
GTGGATCAGGCTATCTTGTAAAATTTAAGATAGCTAAGGTTGTGCCAGAACAATCTATAG
CTACTGACCATGCTGGAGAGTATGATGAATCTCTTGAAGATGATATTAAGAAAAAGAGGC
TGTCAAAGGTTTCCAAAAACAAGAGCCTTCCATATGAAGTGGACGAAGACTTCACTATGT
ACCGATCTGGCAGGGATGGTAGGAAGAAGTTGAAACTGGTGGATAGCGATGATTTTATTG
AAGAGGAACCTGAGATGGATGAGCCAAAGAAGAGACTAAGTGAAGCTGATTCACATTCAG
ATGTAAAGAATGAAACTACTGGCCTTATAACCAGGCAGCGTGCTCTTCAAGGCAGAGGTG
GCAATGGTGAAACTCTGATTGAATTTCCTGATGGATTACCAACTGCTTCATCGAGAAGGC
AAAAGGATAAGGCTTCTGAAGTGGAGGCACAAGCCAAAAAGGCAGAAGCGGCTCAGAGGC
GTAAATTGCAAGTTGAGAAGGCAGAGAGGGAACAACAGGCCGAAGCAGTGAGGAAAATCC
TGGGTATTGATATTGAGAAGAAAAAAGAGGAGAGGAAACAGAAAGAGCGGGATGAGAAGG
AAAAGCAAGAAAAAACAGAAGAATATAGAAGGAACTGCATCCAATGTGTCATGGGGCCAG
AAGGAACTGTTGTCACATTTCCTGATAAGATGGGCCTCCCTAGCATATTTGACTCCAAGC
CTATCAGCTATCCACCTCCAAGGGAGAAATGTGCAGGCCCTTCATGCACAAATCCATACA
AGTACCGGGACTCAAAGACGAAGCTTCCGCTCTGCAGCCTGCAGTGCTACAAGGCTGTCC
AGGGAAGCTCTGAGGCTGCCCAGGGAAGCTCTGAGACGCTAACATGCTGATCTCAGAAAT
TAAAGGATGGTGGTGAGGCAATCGTGACTGTTTTGTGGAACTGGAGAATTGTGCTAGTTC
CATTTGCCACCTTTGCTGCTTGTTCTTGTGTTGCCAATGTTACCTTTTGCCAGTCCTAAC
AATCAACCAACCAACAGAGGGGGTGTCGCCTGCTGCTGGCCATCCTTTTGACTCGTTGTG
GATGCAGCTGCAGTGTTCTCGATTAAGGATTAATTTAGGTGGTAGTCAGATGAATGAGAG
TGATGTATACATTAGTTGTACAGTGATCATCCTACTCGTCATCGTTGGTCATGAAATCAT
CTTGAAAATTGTCTCTCTGTT
clustalw multiple alignements is not computed in this case