These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8617#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2061 fasta sequence [ACCCTACTCCCCCGCCGAACCCTAACCCTAGCTCCCCCTCCTCCTTTCCGCCACTCGCCGCCGCCGCCGCCGCCGGGGCGGGCGGCTCCTGCTGGATTGAGGTACCACGGGTAGCTAAGTCGGTAGGCGCCTGATTTGGGAGATCAGGGTGTCCTGTAATGGAGGGGCATGGCAACCCTCCACTGAATGCGGCGGAAGCAGTTTTGAAGAGGCCCAGGAGTGTTGCTTCAAGGAAGCCGAGATCGAAGGAGCAGCTCATTAGTGAGTTCAAGGACCTCTCGTGCACGCCGTCGCGGAGCATCTCCCCGGAAGATGATGCTGGCGTTGAGGGCAGTGGGCATCGGCGCAAGGAGTTGTACCTCAATGGCCCTGAGGCTAGGGGATCCGTACCACACAGGAGTGACGCGTCCAGAAAAATAAAGAGAGATGATAATAGAGCTGCAGGAGACCATGATGAACAAAATAAGAGCAGCAAATCAAAGGATGGCAAGCATACTAGTGAGGGGGTCCTGGCTCTTGCCTGCACAAGAAACTCTGGATCCCCTGATGGCCAGCATTTGCCTCCAAAAGACACTACTAGTATGCCAGGTTTGAGAAAAGTAAAGCTCAAGGTTAGCGGGATTACTCGACCTCTACATACAAAAAACATCCAAGAGGCAAGTGATGGTGGCACGCTCGGCACATCAGATGGCTCTTCTCAGCGGCATAAGCAAAAGGATTCTGGTGGGCACAAACATCACCAAGATAAGCATGATGTTTCACCATCTTCAGACCTTGTTCGCAAGAGCAAACGGATTCCTAAGAAGCGAACACTTGATGGTGATTCTGGTGATGAAGATGGTGGATCAGGCTATCTTGTAAAATTTAAGATAGCTAAGGTTGTGCCAGAACAATCTATAGCTACTGACCATGCTGGAGAGTATGATGAATCTCTTGAAGATGATATTAAGAAAAAGAGGCTGTCAAAGGTTTCCAAAAACAAGAGCCTTCCATATGAAGTGGACGAAGACTTCACTATGTACCGATCTGGCAGGGATGGTAGGAAGAAGTTGAAACTGGTGGATAGCGATGATTTTATTGAAGAGGAACCTGAGATGGATGAGCCAAAGAAGAGACTAAGTGAAGCTGATTCACATTCAGATGTAAAGAATGAAACTACTGGCCTTATAACCAGGCAGCGTGCTCTTCAAGGCAGAGGTGGCAATGGTGAAACTCTGATTGAATTTCCTGATGGATTACCAACTGCTTCATCGAGAAGGCAAAAGGATAAGGCTTCTGAAGTGGAGGCACAAGCCAAAAAGGCAGAAGCGGCTCAGAGGCGTAAATTGCAAGTTGAGAAGGCAGAGAGGGAACAACAGGCCGAAGCAGTGAGGAAAATCCTGGGTATTGATATTGAGAAGAAAAAAGAGGAGAGGAAACAGAAAGAGCGGGATGAGAAGGAAAAGCAAGAAAAAACAGAAGAATATAGAAGGAACTGCATCCAATGTGTCATGGGGCCAGAAGGAACTGTTGTCACATTTCCTGATAAGATGGGCCTCCCTAGCATATTTGACTCCAAGCCTATCAGCTATCCACCTCCAAGGGAGAAATGTGCAGGCCCTTCATGCACAAATCCATACAAGTACCGGGACTCAAAGACGAAGCTTCCGCTCTGCAG-CCTGCAGTGCTACAAGGCTGTCCAGGGAAGCTCTGAGGCTGCCCAGGGAAGCTCTGAGACGCTAACAT-GCTGATCTCAGAAATTAAAGGATGGTGGTGAGGCAATCGTGACT-GTTTTGTGGAACTGGAGAATTG-TGCTAGTTCCATTTGCCACCTTTGCTGCTTGTTCTTGTGTTGCCAATGTTACC-TTTTGCCAGTCCTAACAATCAACCAACCAACAGA--GGGGGT-GTCGCCTGCTGCTGGCCATCCTTTTGAC-TCGTTGTGGATGCAGCTGCAGTGTTCTCGATTAAGGATTAATTTAGGTGGTAGTCAGATGAATGAGAGTGATGTATACATTAGTTGTACAGTGATCATCCTACTCGTCATCGTTGGTCATGAAATCATCTTGAAAATTGTCTCTCTGTT] [+] EMBL AK103214 [ACCCTACTCCCCCGCCGAACCCTAACCCTAGCTCCCCCTCCTCCTTTCCGCCACTCGCCGCCGCCGCCGCCGCCGGGGCGGGCGGCTCCTGCTGGATTGAGGTACCACGGGTAGCTAAGTCGGTAGGCGCCTGATTTGGGAGATCAGGGTGTCCTGTAATGGAGGGGCATGGCAACCCTCCACTGAATGCGGCGGAAGCAGTTTTGAAGAGGCCCAGGAGTGTTGCTTCAAGGAAGCCGAGATCGAAGGAGCAGCTCATTAGTGAGTTCAAGGACCTCTCGTGCACGCCGTCGCGGAGCATCTCCCCGGAAGATGATGCTGGCGTTGAGGGCAGTGGGCATCGGCGCAAGGAGTTGTACCTCAATGGCCCTGAGGCTAGGGGATCCGTACCACACAGGAGTGACGCGTCCAGAAAAATAAAGAGAGATGATAATAGAGCTGCAGGAGACCATGATGAACAAAATAAGAGCAGCAAATCAAAGGATGGCAAGCATACTAGTGAGGGGGTCCTGGCTCTTGCCTGCACAAGAAACTCTGGATCCCCTGATGGCCAGCATTTGCCTCCAAAAGACACTACTAGTATGCCAGGTTTGAGAAAAGTAAAGCTCAAGGTTAGCGGGATTACTCGACCTCTACATACAAAAAACATCCAAGAGGCAAGTGATGGTGGCACGCTCGGCACATCAGATGGCTCTTCTCAGCGGCATAAGCAAAAGGATTCTGGTGGGCACAAACATCACCAAGATAAGCATGATGTTTCACCATCTTCAGACCTTGTTCGCAAGAGCAAACGGATTCCTAAGAAGCGAACACTTGATGGTGATTCTGGTGATGAAGATGGTGGATCAGGCTATCTTGTAAAATTTAAGATAGCTAAGGTTGTGCCAGAACAATCTATAGCTACTGACCATGCTGGAGAGTATGATGAATCTCTTGAAGATGATATTAAGAAAAAGAGGCTGTCAAAGGTTTCCAAAAACAAGAGCCTTCCATATGAAGTGGACGAAGACTTCACTATGTACCGATCTGGCAGGGATGGTAGGAAGAAGTTGAAACTGGTGGATAGCGATGATTTTATTGAAGAGGAACCTGAGATGGATGAGCCAAAGAAGAGACTAAGTGAAGCTGATTCACATTCAGATGTAAAGAATGAAACTACTGGCCTTATAACCAGGCAGCGTGCTCTTCAAGGCAGAGGTGGCAATGGTGAAACTCTGATTGAATTTCCTGATGGATTACCAACTGCTTCATCGAGAAGGCAAAAGGATAAGGCTTCTGAAGTGGAGGCACAAGCCAAAAAGGCAGAAGCGGCTCAGAGGCGTAAATTGCAAGTTGAGAAGGCAGAGAGGGAACAACAGGCCGAAGCAGTGAGGAAAATCCTGGGTATTGATATTGAGAAGAAAAAAGAGGAGAGGAAACAGAAAGAGCGGGATGAGAAGGAAAAGCAAGAAAAAACAGAAGAATATAGAAGGAACTGCATCCAATGTGTCATGGGGCCAGAAGGAACTGTTGTCACATTTCCTGATAAGATGGGCCTCCCTAGCATATTTGACTCCAAGCCTATCAGCTATCCACCTCCAAGGGAGAAATGTGCAGGCCCTTCATGCACAAATCCATACAAGTACCGGGACTCGAAGACGAAGCTTCCGCTCTGCAG CCTGCAGTGCTACAAGGCTGTCCAGGGAAGCTCTGAGGCTGCCCAGGGAAGCTCTGAGACGCTAACAT GCTGATCTCAGAAATTAAAGGATGGTGGTGAGGCAATCGTGACT GTTTTGTGGAACTGGAGAATTG TGCTAGTTCCATTTGCCACCTTTGCTGCTTGTTCTTGTGTTGCCAATGTTACC TTTTGCCAGTCCTAACAATCAACCAACCAACAGA GGGGGT GTCGCCTGCTGCTGGCCATCCTTTTGAC TCGTTGTGGATGCAGCTGCAGTGTTCTCGATTAAGGATTAATTTAGGTGGTAGTCAGATGAATGAGAGTGATGTATACATTAGTTGTACAGTGATCATCCTACTCGTCATCGTTGGTCATGAAATCATCTTGAAAATTGTCTCTCTGTT] [+] EMBL CA999754 [ ACCATGCTGGAGAGTATGATGAATCTCTTGAAGATGATATTAAGAAAAAGAGGCTGTCAAAGGTTTCCAAAAACAAGAGCCTTCCATATGAAGTGGACGAAGACTTCACTATGTACCGATCTGGCAGGGATGGTAGGAAGAAGTTGAAACTGGTGGATAGCGATGATTTTATTGAAGAGGAACCTGAGATGGATGAGCCAAAGAAGAGACTAAGTGAAGCTGATTCACATTCAGATGTAAAGAATGAAACTACTGGCCTTATAACCAG ] [+] EMBL CA765611 [ ACATTNAGATGTAAAGAATGAAACTACTGGCCTTATAA CNGGCAGCGTGCTCTTCAAGGCAGAGGTGGCAATGGTGAAACTCTGATTGAATTTCCTGATGGATTACCAACTGCTTCATCGAGAAGGCAAAAGGATAAGGCTTCTGAAGTGGAGGCACAAGCCAAAAAGGCAGAAGCGGCTCAGAGGCGTAAATTGCAAGTTGAGAAGGCAGAGAGGGAACAACAGGCCGAAGCAGTGAGGAAAATCCTGGGTATTGATATTGAGAAGAAAAAAGAGGAGAGGAAACAGAAAGAGCGGGATGAGAAGGAAAAGCAAGAAAAAACAGAAGAATATAGAAGGAACTGCATCCAATGTGTCATGGGGCCAGAAGGAACTGTTGTCACATTTCCTGATAAGATGGGCCTCCCTAGCATATTTGACTCCAAGCCTATCAGCTATCCACCTCCAAGGGAGAAATGTGCAGGCCCTTCATGCACAAATCCATACAAGTACCGGGACTCAAAGACGAAGCTTCCGCTCTGCAGCCCTGCAGTGCTACAAGGCTGTCCAGGGAAGCTCTGAGGCTGCCCAGGGAAGCTCTGAGACGCTAACATGGCTGATCTCAGAAATTAAAGGATGGTGGTGAGGCAATCGTGACTGGTTTTGTGGAACTGGAGAATTGNNGCTAGTTTCATTTGCCACCTTTGCTGCTTGNTCTTGNGTTGNCAATGGTACCTTTTTGCCAGTCCTAACAATCAACCAGCCAACAGANGGGGGGTGGTCGCCTGCTGCTGGCCATCCTTTTGACTTCGTTGNGGATGCAGCTtgc ] [+] EMBL CB097012 [ agggGAGAAGGAAAAGCAAGAAAAAACAGAAGAATATAGAGGGAACTGCATCCAATGTGTCATGGGGCCAGAAGGAACTGTTGTCACATTTCCTGATAAGATGGGCCTCCCTAGCATATTTGACTCCAAGCCTATCAGCTATCCACCTCCAAGGGAGAAATGTGCAGGCCCTTCATGCACAAATCCATACAAGTACCGGGACTCAAAGACGAAGCTTCCGCTCTGCAG CCTGCAGTGCTACAAGGCTGTCCAGGGAAGCTCTGAGGCTGCCCAGGGAAGCTCTGAGACGCTAACAT GCTGATCTCAGAAATTAAAGGATGGTGGTGAGGCAATCGTGACT GTTTTGTGGAACTGGAGAATTG TGCTAGTTCCATTTGCCACCTTTGCTGCTTGTTCTTGTGTTGCCAATGTTACC TTTTGCCAGTCCTAACAATCAACCAGCCAACAGA GGGGGT GTCGCCTGCTGCTGGCCATCCTTTTGAC TCGTTGTGGATGCAGCTGCAGTGTTCTCGATTAAGGATTAATTTAGGTGGTAGTCAGATGAATGAGAGTGATGTATACATTAGTTGTACAGTGATCATCCTACTCGTCATCGNTGGTCA ] [+] EMBL BM420760 [ CTGCAG CCTGCAGTGCTACAA GCTGTCCAGGGAAGCTCTGAGGCTGCCCAGGGAAGCTCTGAGACGCTAACAT GCTGATCTCAGAAATTAAAGGATGGTGGTGAGGC ATCGTGACT GTTTTGTGGAACTGGAGAATTG TGCTAGTTCCATTTGCCACCTTTGCTGCTTGTTCTTGTGTTGCCCATGTTACC TTTGGCCAGTCCTAAC ATCAACC ACCTACAGA GGGGGT GTC CCTGCTGCTGGCCATCCTTTTGAC TCGTTGTGGATGCAGCTGCAGTGTTCTCGATTAAGGATTAATTTA GTGGTAGTCAGATGAATGAGAGTGATGTATACATTAGTTGTACAGTGATCNTCCTACTCGTCATCGTTGGTCATGAAAaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||